AT1G10920

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
3644180 .. 3647784
3605 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G10920.5

Sequence Viewer

Length: 2184 bp
ATGAAGAGTTTAGGAATACAAGAGATTATCGATGGTGCTAGTTCGATGTCGCTGCAAGAAAGACAAAGGGAGCAAAAGGAGATCCGGCAAACGTTTGCTAACAGTTCTGAAAGCGACCTTGTGGGGGTGGAACAGAGTGTTGAAGCATTGGCTGGTCACTTGGTGGAGAATGATAACATTCAAGTGGTTTCTATATCTGGGATGGGTGGTATTGGTAAAACCACTCTCGCAAGACAAGTCTTTCATCATGACATGGTACAACGCCATTTTGATGGATTCGCATGGGTCTTTGTTTCGCAACAGTTTACGCAGAAGCATGTTTGGCAGAGGATCTGGCAAGAACTTCAACCACAAAATGGGGACATTTCACATATGGACGAGCATATACTCCAGGGTAAACTCTTTAAATTGTTAGAAACCGGTAGATATTTGGTTGTTCTTGATGACGTATGGAAAGAAGAAGACTGGGACCGAATTAAAGCAGTGTTTCCGCGGAAAAGAGGTTGGAAGATGCTTCTCACTTCTCGCAATGAAGGTGTTGGAATACATGCAGATCCAAAAAGTTTTGGCTTTAAAACAAGAATCCTTACTCCTGAAGAAAGTTGGAAGCTATGTGAGAAGATAGTGTTTCATAGGAGAGACGAAACTGGTACACTTTCAGAAGTAAGGGTTGATGAAGATATGGAAGCCATGGGAAAGGAAATGGTCACGTGTTGTGGAGGACTACCATTGGCCGTTAAAGTTTTGGGAGGCTTATTAGCTACGAAACATACAGTTCCCGAGTGGAAAAGAGTATATGACAATATTGGACCCCATCTCGCAGGAAGATCTAGCTTAGATGACAATCTCAATTCGATTTATCGAGTATTGTCTCTGAGCTATGAAAATTTGCCAATGTGTTTAAAGCATTGCTTCCTTTACCTAGCCCATTTTCCCGAATATTACGAAATACATGTGAAGAGATTGTTCAATTATTTAGCGGCAGAAGGAATAATAACGTCATCTGACGATGGAACAACCATCCAAGATAAGGGAGAAGACTACCTAGAAGAGCTAGCGAGGAGAAATATGATTACTATCGACAAAAACTATATGTTTTTGAGAAAGAAACATTGTCAAATGCATGACATGATGAGAGAAGTATGTTTATCAAAAGCCAAAGAGGAGAACTTCCTAGAAATCTTCAAAGTCTCTACAGCCACCTCTGCCATCAATGCTCGATCTCTTAGCAAATCTCGCAGACTCTCCGTACATGGTGGTAATGCCCTTCCAAGTTTGGGACAAACAATCAATAAAAAAGTCAGATCTCTTTTGTATTTTGCTTTCGAGGATGAGTTTTGTATACTAGAGTCAACAACCCCATGCTTCCGAAGTTTACCATTGCTTAGGGTGTTGGATCTTTCTCGGGTAAAGTTTGAAGGAGGGAAGTTACCTTCCAGCATTGGAGATCTCATCCACTTGAGATTCTTGAGCTTACACCGGGCATGGATATCTCATCTACCTTCTTCTCTGCGGAATCTTAAGCTTCTGCTCTATTTGAACTTGGGCTTCAATGGGATGGTTCATGTGCCAAATGTTTTGAAAGAGATGCAAGAACTGAGGTACCTTCAGTTACCTATGTCAATGCATGATAAAACAAAGTTGGAATTGAGTGACCTAGTGAACCTGGAGTCTTTGATGAATTTTTCAACAAAGTACGCTAGTGTGATGGACCTCCTCCATATGACTAAGCTAAGGGAGCTCAGTCTATTTATTACTGACGGGTCTAGTGACACTCTATCGTCATCTCTTGGTCAATTGAGATCCCTGGAGGTGCTTCATTTATATGATAGGCAAGAACCTCGTGTAGCTTATCATGGGGGAGAAATTGTTCTGAATTGTATTCACCTAAAGGAATTAGAGTTGGCGATACATATGCCAAGGTTTCCTGATCAATATCTATTCCATCCCCACCTTTCACACATATATCTATGGTGTTGCAGCATGGAGGAGGATCCAATCCCGATTCTTGAAAGGCTGCTGCATTTGAAGTCAGTTATATTAACATTTGGTGCTTTCGTCGGAAGGAGAATGGTGTGCTCAAAAGGCGGTTTTCCTCAATTATGTTTTTTAAAACTAGAAGAACTAGAGGAGTTGGAAGAGTGGATAGTAGAAGAAGGGCGATGCCACTTCTTCGTGCTTTGA

Protein Analysis

727

Amino Acids

83.68

Weight (kDa)

6.42

Isoelectric Point (pI)

45.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 1 - 44 2.5e-06 NB-ARC domain
WHD_DRP PF23559 141 - 211 3.3e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 263 - 537 1.4e-30 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1602
AccB1I GGYRCC 1 cut(s) 1602
AccB7I CCANNNNNTGG 1 cut(s) 356
AccI GTMKAC 1 cut(s) 1342
AccII CGCG 1 cut(s) 493
AciI CCGC 5 cut(s) 491, 493, 980, 1513, 2088
AclI AACGTT 1 cut(s) 92
AclWI GGATC 7 cut(s) 76, 338, 548, 1404, 1797, 1988, 2001
AcoI YGGCCR 1 cut(s) 732
AcsI RAATTY 2 cut(s) 886, 1681
AcuI CTGAAG 2 cut(s) 615, 1592
AcvI CACGTG 1 cut(s) 711
AdeI CACNNNGTG 1 cut(s) 163
AfaI GTAC 5 cut(s) 258, 652, 1251, 1604, 1697
AfiI CCNNNNNNNGG 4 cut(s) 124, 356, 1030, 1277
AflII CTTAAG 1 cut(s) 1520
AflIII ACRYGT 2 cut(s) 710, 952
AgeI ACCGGT 1 cut(s) 419
AjnI CCWGG 3 cut(s) 390, 1665, 1806
AloI GAACNNNNNNTCC 2 cut(s) 1854, 1886
Alw21I GWGCWC 2 cut(s) 1743, 2081
Alw26I GTCTC 3 cut(s) 633, 876, 1195
AlwI GGATC 7 cut(s) 76, 338, 548, 1404, 1797, 1988, 2001
Ama87I CYCGRG 2 cut(s) 779, 1404
AoxI GGCC 1 cut(s) 732
ApeKI GCWGC 4 cut(s) 52, 1980, 2017, 2020
ApoI RAATTY 2 cut(s) 886, 1681
AsiGI ACCGGT 1 cut(s) 419
Asp700I GAANNNNTTC 1 cut(s) 1869
Asp718I GGTACC 1 cut(s) 1602
AspS9I GGNCC 3 cut(s) 469, 809, 1711
AsuC2I CCSGG 1 cut(s) 1481
AsuHPI GGTGA 1 cut(s) 1877
AsuNHI GCTAGC 1 cut(s) 1054
AvaI CYCGRG 2 cut(s) 779, 1404
AvaII GGWCC 3 cut(s) 469, 809, 1711
BaeI ACNNNNGTAYC 2 cut(s) 1586, 1619
BamHI GGATCC 1 cut(s) 1993
BanI GGYRCC 1 cut(s) 1602
BanII GRGCYC 1 cut(s) 1743
BauI CACGAG 1 cut(s) 1842
BbrPI CACGTG 1 cut(s) 711
BbsI GAAGAC 2 cut(s) 468, 1044
Bbv12I GWGCWC 2 cut(s) 1743, 2081
BbvI GCAGC 4 cut(s) 39, 1992, 2004, 2007
BceAI ACGGC 1 cut(s) 719
BcgI CGANNNNNNTGC 6 cut(s) 34, 68, 1823, 1857, 1897, 1931
BciT130I CCWGG 3 cut(s) 392, 1667, 1808
BclI TGATCA 1 cut(s) 1930
BcnI CCSGG 1 cut(s) 1481
BcoDI GTCTC 3 cut(s) 633, 876, 1195
BfmI CTRYAG 1 cut(s) 1194
BfrI CTTAAG 1 cut(s) 1520
BglII AGATCT 3 cut(s) 827, 1304, 1447
BisI GCNGC 5 cut(s) 53, 981, 1981, 2018, 2021
BlsI GCNGC 5 cut(s) 54, 982, 1982, 2019, 2022
Bme1390I CCNGG 4 cut(s) 392, 1481, 1667, 1808
Bme18I GGWCC 3 cut(s) 469, 809, 1711
BmeT110I CYCGRG 2 cut(s) 779, 1404
BmgT120I GGNCC 3 cut(s) 469, 809, 1711
BmiI GGNNCC 4 cut(s) 470, 811, 1604, 1995
BmrFI CCNGG 4 cut(s) 392, 1481, 1667, 1808
BmrI ACTGGG 1 cut(s) 475
BmsI GCATC 3 cut(s) 501, 1578, 2153
BmtI GCTAGC 1 cut(s) 1058
BmuI ACTGGG 1 cut(s) 475
BpiI GAAGAC 2 cut(s) 468, 1044
BpmI CTGGAG 3 cut(s) 374, 1688, 1829
Bpu10I CCTNAGC 2 cut(s) 1385, 1733
BpuEI CTTGAG 2 cut(s) 1480, 1489
BpuMI CCSGG 1 cut(s) 1481
Bsa29I ATCGAT 1 cut(s) 30
BsaAI YACGTR 1 cut(s) 711
BsaBI GATNNNNATC 3 cut(s) 843, 1076, 1935
BsaJI CCNNGG 5 cut(s) 391, 491, 690, 1806, 1919
BsaWI WCCGGW 1 cut(s) 419
BsaXI ACNNNNNCTCC 2 cut(s) 1854, 1884
Bsc4I CCNNNNNNNGG 4 cut(s) 124, 356, 1030, 1277
Bse118I RCCGGY 1 cut(s) 419
Bse1I ACTGG 2 cut(s) 470, 652
Bse3DI GCAATG 3 cut(s) 535, 907, 1379
Bse8I GATNNNNATC 3 cut(s) 843, 1076, 1935
BseBI CCWGG 3 cut(s) 392, 1667, 1808
BseCI ATCGAT 1 cut(s) 30
BseDI CCNNGG 5 cut(s) 391, 491, 690, 1806, 1919
BseGI GGATG 6 cut(s) 207, 1020, 1336, 1452, 1563, 1945
BseJI GATNNNNATC 3 cut(s) 843, 1076, 1935
BseLI CCNNNNNNNGG 4 cut(s) 124, 356, 1030, 1277
BseMI GCAATG 3 cut(s) 535, 907, 1379
BseMII CTCAG 3 cut(s) 866, 1589, 1756
BseNI ACTGG 2 cut(s) 470, 652
BseRI GAGGAG 5 cut(s) 1075, 1178, 1706, 2003, 2144
BseXI GCAGC 4 cut(s) 39, 1992, 2004, 2007
Bsh1236I CGCG 1 cut(s) 493
BshFI GGCC 1 cut(s) 734
BshNI GGYRCC 1 cut(s) 1602
BshTI ACCGGT 1 cut(s) 419
BshVI ATCGAT 1 cut(s) 30
BsiHKAI GWGCWC 2 cut(s) 1743, 2081
BsiHKCI CYCGRG 2 cut(s) 779, 1404
BsiSI CCGG 3 cut(s) 85, 420, 1480
BslFI GGGAC 3 cut(s) 374, 482, 1293
BslI CCNNNNNNNGG 4 cut(s) 124, 356, 1030, 1277
BsmAI GTCTC 3 cut(s) 633, 876, 1195
BsmBI CGTCTC 1 cut(s) 633
BsmFI GGGAC 3 cut(s) 374, 482, 1293
BsnI GGCC 1 cut(s) 734
BsoBI CYCGRG 2 cut(s) 779, 1404
Bsp1286I GDGCHC 2 cut(s) 1743, 2081
Bsp19I CCATGG 1 cut(s) 690
BspACI CCGC 5 cut(s) 491, 493, 980, 1513, 2088
BspANI GGCC 1 cut(s) 734
BspCNI CTCAG 3 cut(s) 867, 1590, 1755
BspDI ATCGAT 1 cut(s) 30
BspFNI CGCG 1 cut(s) 493
BspHI TCATGA 1 cut(s) 247
BspLI GGNNCC 4 cut(s) 470, 811, 1604, 1995
BspOI GCTAGC 1 cut(s) 1058
BspPI GGATC 7 cut(s) 76, 338, 548, 1404, 1797, 1988, 2001
BspQI GCTCTTC 1 cut(s) 1044
BspT107I GGYRCC 1 cut(s) 1602
BspTI CTTAAG 1 cut(s) 1520
BsrDI GCAATG 3 cut(s) 535, 907, 1379
BsrFI RCCGGY 1 cut(s) 419
BsrI ACTGG 2 cut(s) 470, 652
BssAI RCCGGY 1 cut(s) 419
BssECI CCNNGG 5 cut(s) 391, 491, 690, 1806, 1919
BssNAI GTATAC 1 cut(s) 1343
BssSI CACGAG 1 cut(s) 1842
BssT1I CCWWGG 2 cut(s) 690, 1919
Bst1107I GTATAC 1 cut(s) 1343
Bst2BI CACGAG 1 cut(s) 1842
Bst2UI CCWGG 3 cut(s) 392, 1667, 1808
Bst4CI ACNGT 3 cut(s) 104, 303, 775
Bst6I CTCTTC 3 cut(s) 953, 1044, 2133
BstAFI CTTAAG 1 cut(s) 1520
BstBAI YACGTR 1 cut(s) 711
BstC8I GCNNGC 1 cut(s) 1056
BstDEI CTNAG 8 cut(s) 835, 875, 1226, 1385, 1598, 1728, 1733, 1742
BstDSI CCRYGG 2 cut(s) 491, 690
BstF5I GGATG 6 cut(s) 207, 1020, 1336, 1452, 1563, 1945
BstFNI CGCG 1 cut(s) 493
BstMAI GTCTC 3 cut(s) 633, 876, 1195
BstMWI GCNNNNNNNGC 6 cut(s) 322, 1205, 1214, 1236, 1738, 2085
BstNI CCWGG 3 cut(s) 392, 1667, 1808
BstNSI RCATGY 3 cut(s) 320, 551, 956
BstSCI CCNGG 4 cut(s) 390, 1479, 1665, 1806
BstSFI CTRYAG 1 cut(s) 1194
BstUI CGCG 1 cut(s) 493
BstV1I GCAGC 4 cut(s) 39, 1992, 2004, 2007
BstV2I GAAGAC 2 cut(s) 468, 1044
BstX2I RGATCY 9 cut(s) 81, 330, 553, 827, 1304, 1396, 1447, 1802, 1993
BstXI CCANNNNNNTGG 1 cut(s) 272
BstYI RGATCY 9 cut(s) 81, 330, 553, 827, 1304, 1396, 1447, 1802, 1993
BstZ17I GTATAC 1 cut(s) 1343
Bsu15I ATCGAT 1 cut(s) 30
BsuRI GGCC 1 cut(s) 734
BsuTUI ATCGAT 1 cut(s) 30
BtgI CCRYGG 2 cut(s) 491, 690
BtgZI GCGATG 1 cut(s) 2176
BtsCI GGATG 6 cut(s) 207, 1020, 1336, 1452, 1563, 1945
BtsI GCAGTG 1 cut(s) 489
BtsIMutI CAGTG 1 cut(s) 489
Cac8I GCNNGC 1 cut(s) 1056
CciI TCATGA 1 cut(s) 247
Cfr10I RCCGGY 1 cut(s) 419
Cfr13I GGNCC 3 cut(s) 469, 809, 1711
Cfr42I CCGCGG 1 cut(s) 494
ClaI ATCGAT 1 cut(s) 30
Csp6I GTAC 5 cut(s) 257, 651, 1250, 1603, 1696
CspAI ACCGGT 1 cut(s) 419
CviQI GTAC 5 cut(s) 257, 651, 1250, 1603, 1696
DdeI CTNAG 8 cut(s) 835, 875, 1226, 1385, 1598, 1728, 1733, 1742
DraI TTTAAA 4 cut(s) 406, 574, 903, 2112
DraIII CACNNNGTG 1 cut(s) 163
EaeI YGGCCR 1 cut(s) 732
Eam1104I CTCTTC 3 cut(s) 953, 1044, 2133
EarI CTCTTC 3 cut(s) 953, 1044, 2133
Ecl136II GAGCTC 1 cut(s) 1741
Eco130I CCWWGG 2 cut(s) 690, 1919
Eco24I GRGCYC 1 cut(s) 1743
Eco32I GATATC 1 cut(s) 1491
Eco47I GGWCC 3 cut(s) 469, 809, 1711
Eco53kI GAGCTC 1 cut(s) 1741
Eco57I CTGAAG 2 cut(s) 615, 1592
Eco72I CACGTG 1 cut(s) 711
Eco88I CYCGRG 2 cut(s) 779, 1404
EcoICRI GAGCTC 1 cut(s) 1741
EcoRII CCWGG 3 cut(s) 390, 1665, 1806
EcoRV GATATC 1 cut(s) 1491
EcoT14I CCWWGG 2 cut(s) 690, 1919
EcoT22I ATGCAT 2 cut(s) 1125, 1629
EcoT38I GRGCYC 1 cut(s) 1743
ErhI CCWWGG 2 cut(s) 690, 1919
Esp3I CGTCTC 1 cut(s) 633
FalI AAGNNNNNCTT 2 cut(s) 896, 928
FaqI GGGAC 3 cut(s) 374, 482, 1293
FauNDI CATATG 3 cut(s) 372, 1722, 1914
FbaI TGATCA 1 cut(s) 1930
FblI GTMKAC 1 cut(s) 1342
Fnu4HI GCNGC 5 cut(s) 53, 981, 1981, 2018, 2021
FokI GGATG 6 cut(s) 214, 1007, 1343, 1439, 1570, 1932
FriOI GRGCYC 1 cut(s) 1743
Fsp4HI GCNGC 5 cut(s) 53, 981, 1981, 2018, 2021
GluI GCNGC 5 cut(s) 53, 981, 1981, 2018, 2021
GsuI CTGGAG 3 cut(s) 374, 1688, 1829
HaeIII GGCC 1 cut(s) 734
HapII CCGG 3 cut(s) 85, 420, 1480
HincII GTYRAC 1 cut(s) 1353
HindII GTYRAC 1 cut(s) 1353
HindIII AAGCTT 1 cut(s) 1523
HinfI GANTC 8 cut(s) 276, 582, 1242, 1349, 1464, 1516, 1670, 2005
HpaII CCGG 3 cut(s) 85, 420, 1480
HphI GGTGA 1 cut(s) 1877
Hpy166II GTNNAC 7 cut(s) 306, 398, 653, 1343, 1353, 1376, 1663
Hpy188I TCNGA 8 cut(s) 109, 661, 876, 1006, 1304, 1370, 1875, 2063
Hpy188III TCNNGA 9 cut(s) 248, 440, 593, 779, 935, 1468, 1928, 2002, 2009
Hpy8I GTNNAC 7 cut(s) 306, 398, 653, 1343, 1353, 1376, 1663
Hpy99I CGWCG 1 cut(s) 2063
HpyAV CCTTC 9 cut(s) 527, 980, 1277, 1412, 1443, 1512, 1616, 2058, 2150
HpyCH4III ACNGT 3 cut(s) 104, 303, 775
HpyCH4IV ACGT 4 cut(s) 92, 447, 710, 998
HpyCH4V TGCA 7 cut(s) 55, 551, 1123, 1591, 1627, 1980, 2023
HpyF10VI GCNNNNNNNGC 6 cut(s) 322, 1205, 1214, 1236, 1738, 2085
HpyF3I CTNAG 8 cut(s) 835, 875, 1226, 1385, 1598, 1728, 1733, 1742
HpySE526I ACGT 4 cut(s) 92, 447, 710, 998
KpnI GGTACC 1 cut(s) 1606
Ksp22I TGATCA 1 cut(s) 1930
KspI CCGCGG 1 cut(s) 494
LguI GCTCTTC 1 cut(s) 1044
LmnI GCTCC 2 cut(s) 70, 1738
Lsp1109I GCAGC 4 cut(s) 39, 1992, 2004, 2007
LweI GCATC 3 cut(s) 501, 1578, 2153
MaeII ACGT 4 cut(s) 92, 447, 710, 998
MaeIII GTNAC 6 cut(s) 155, 706, 1428, 1611, 1652, 1769
MfeI CAATTG 1 cut(s) 1796
MflI RGATCY 9 cut(s) 81, 330, 553, 827, 1304, 1396, 1447, 1802, 1993
MhlI GDGCHC 2 cut(s) 1743, 2081
MlyI GAGTC 3 cut(s) 1236, 1358, 1679
MmeI TCCRAC 7 cut(s) 485, 520, 584, 1374, 1623, 2041, 2115
Mph1103I ATGCAT 2 cut(s) 1125, 1629
MroXI GAANNNNTTC 1 cut(s) 1869
MseI TTAA 8 cut(s) 405, 477, 573, 738, 902, 1521, 2042, 2111
MslI CAYNNNNRTG 3 cut(s) 182, 270, 1824
MspA1I CMGCKG 1 cut(s) 493
MspCI CTTAAG 1 cut(s) 1520
MspI CCGG 3 cut(s) 85, 420, 1480
MspR9I CCNGG 4 cut(s) 392, 1481, 1667, 1808
MunI CAATTG 1 cut(s) 1796
MvaI CCWGG 3 cut(s) 392, 1667, 1808
MvnI CGCG 1 cut(s) 493
MwoI GCNNNNNNNGC 6 cut(s) 322, 1205, 1214, 1236, 1738, 2085
NciI CCSGG 1 cut(s) 1481
NcoI CCATGG 1 cut(s) 690
NdeI CATATG 3 cut(s) 372, 1722, 1914
NheI GCTAGC 1 cut(s) 1054
NlaIV GGNNCC 4 cut(s) 470, 811, 1604, 1995
NmuCI GTSAC 4 cut(s) 155, 706, 1652, 1769
NsiI ATGCAT 2 cut(s) 1125, 1629
NspI RCATGY 3 cut(s) 320, 551, 956
PagI TCATGA 1 cut(s) 247
PciI ACATGT 1 cut(s) 952
PciSI GCTCTTC 1 cut(s) 1044
PdmI GAANNNNTTC 1 cut(s) 1869
PfeI GAWTC 5 cut(s) 276, 582, 1464, 1516, 2005
PflMI CCANNNNNTGG 1 cut(s) 356
PinAI ACCGGT 1 cut(s) 419
PkrI GCNGC 5 cut(s) 54, 982, 1982, 2019, 2022
PleI GAGTC 3 cut(s) 1236, 1357, 1678
PmaCI CACGTG 1 cut(s) 711
PmlI CACGTG 1 cut(s) 711
PpsI GAGTC 3 cut(s) 1236, 1357, 1678
Ppu21I YACGTR 1 cut(s) 711
PscI ACATGT 1 cut(s) 952
Psp124BI GAGCTC 1 cut(s) 1743
Psp1406I AACGTT 1 cut(s) 92
Psp6I CCWGG 3 cut(s) 390, 1665, 1806
PspCI CACGTG 1 cut(s) 711
PspGI CCWGG 3 cut(s) 390, 1665, 1806
PspN4I GGNNCC 4 cut(s) 470, 811, 1604, 1995
PspPI GGNCC 3 cut(s) 469, 809, 1711
PsuI RGATCY 9 cut(s) 81, 330, 553, 827, 1304, 1396, 1447, 1802, 1993
RsaI GTAC 5 cut(s) 258, 652, 1251, 1604, 1697
RsaNI GTAC 5 cut(s) 257, 651, 1250, 1603, 1696
RseI CAYNNNNRTG 3 cut(s) 182, 270, 1824
SacI GAGCTC 1 cut(s) 1743
SacII CCGCGG 1 cut(s) 494
SapI GCTCTTC 1 cut(s) 1044
SaqAI TTAA 8 cut(s) 405, 477, 573, 738, 902, 1521, 2042, 2111
SatI GCNGC 5 cut(s) 53, 981, 1981, 2018, 2021
Sau96I GGNCC 3 cut(s) 469, 809, 1711
SchI GAGTC 3 cut(s) 1236, 1358, 1679
ScrFI CCNGG 4 cut(s) 392, 1481, 1667, 1808
SduI GDGCHC 2 cut(s) 1743, 2081
SfaNI GCATC 3 cut(s) 501, 1578, 2153
SfcI CTRYAG 1 cut(s) 1194
Sfr303I CCGCGG 1 cut(s) 494
SgrBI CCGCGG 1 cut(s) 494
SinI GGWCC 3 cut(s) 469, 809, 1711
SmiMI CAYNNNNRTG 3 cut(s) 182, 270, 1824
SmlI CTYRAG 3 cut(s) 1459, 1468, 1520
SmoI CTYRAG 3 cut(s) 1459, 1468, 1520
SsiI CCGC 5 cut(s) 491, 493, 980, 1513, 2088
SspI AATATT 2 cut(s) 805, 941
SstI GAGCTC 1 cut(s) 1743
StyD4I CCNGG 4 cut(s) 390, 1479, 1665, 1806
StyI CCWWGG 2 cut(s) 690, 1919
TaaI ACNGT 3 cut(s) 104, 303, 775
TaiI ACGT 4 cut(s) 95, 450, 713, 1001
TaqI TCGA 7 cut(s) 30, 44, 854, 862, 1080, 1219, 1326
TaqII GACCGA 1 cut(s) 486
TauI GCSGC 1 cut(s) 983
TfiI GAWTC 5 cut(s) 276, 582, 1464, 1516, 2005
Tru1I TTAA 8 cut(s) 405, 477, 573, 738, 902, 1521, 2042, 2111
Tru9I TTAA 8 cut(s) 405, 477, 573, 738, 902, 1521, 2042, 2111
TscAI CASTG 1 cut(s) 489
TseFI GTSAC 4 cut(s) 155, 706, 1652, 1769
TseI GCWGC 4 cut(s) 52, 1980, 2017, 2020
Tsp45I GTSAC 4 cut(s) 155, 706, 1652, 1769
TspDTI ATGAA 9 cut(s) 17, 233, 546, 620, 690, 897, 1553, 1694, 1808
TspGWI ACGGA 1 cut(s) 1237
TspRI CASTG 1 cut(s) 489
Van91I CCANNNNNTGG 1 cut(s) 356
Vha464I CTTAAG 1 cut(s) 1520
VpaK11BI GGWCC 3 cut(s) 469, 809, 1711
XapI RAATTY 2 cut(s) 886, 1681
XceI RCATGY 3 cut(s) 320, 551, 956
XmiI GTMKAC 1 cut(s) 1342
XmnI GAANNNNTTC 1 cut(s) 1869
Zsp2I ATGCAT 2 cut(s) 1125, 1629
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.