Prupe.1G194900_v2.0.a1

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000069
Physical Location & Seq
Reverse (-)
18447562 .. 18450107
2546 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G194900.1

Sequence Viewer

Length: 1950 bp
ATGGCTGCTGAGGTAGTTGTGTCGGTTGTGATGCAGAAACTCACCAACATGCTGGTTCAAGAATCGACGATCTCCGACGAGATGATAGATCAGGCTGAGGGCCTCAGAATAAGATTCAGAGAAATGCAAAGATACTTGAGAGATGCGGAAAGCAAACAAGAAAGCTACGAAGATGTTAGGAAGTGGATGGCAGAGTTTCTGGGCATAGCGTATGATTTGGAGGACTTCGTCGACATTTTTGTCCTCGAAAGAACGCGACGGAGGAGATCGAGCTTCATCGGCTACATTGCGACATTGGAAGGCCTGAAGGCTACTCTGAAACTCTGCAGCGAGATGAAAGAAATAGAAGGCAAAATCTCGGATTATATGTCCAAGTTTAGCCAAATAAACCAGCGCCTTACTCTCTCAATGGACAAGGGGCCAATTTTGCGAAAGCAAAATGATCTGCCTGAGGACCTGCCCTCCCACCTGAGGCCTTGCCTTCTGTATCTGGGAATGTTTCCAAAAGAAGTGGACATACCCGTGAGAAGATTGTTTCATCTATGGCTTGCAGAAGGATTTGTGAAACAGTCGCCTGGAATGTCTCCAGAGGATTTGGTGGAGGAATATCTAGCAGAACTGGTGAGAAGAGAAATGATTCTTGTGTTTAGTTTCAGGTCAGATGGAAGTGCAAAGACATGCCGTATGCCGGAAAAGCTTCGGCATGTCCTTTCACTCAAAGCTGAGGAAATTGGTCTGTTTTATATCCATGGGAAATTAGCTTCTCGTGCACCGGCATCATCAGTCTCTGATCCCCAGTTTGCAGTTCGTCGTGTGGTTGAGCATGCTGACATTAAAGACTACCCAGGTGAGACTGAGTTTTATGTCAAAAATCTGCGCTCTTATATTTCCTTTAACACCCAAAAGAAGGATTTGCAAGCAATCCAAATTGGGAAGTTTGTGAGCAAGATTATTGGTAAAAGAGGATATGCATTACTTAGGGTGCTTGATCTTGAAGGGGTTTATAAACCTCAGTTGCCTGAAGAGCTGGGGTTTCTTTACCACTTGAGGTATCTGGGTTTGAGGTGGACCTTCTCGGATGCTCTTCCTACATCTGTGGGGCACCTACCCTACCTAGAGACCCTGGATGTCAAGCACACTTATATAAGAACTCTCCCAAGTACCATTTGGAAAATGAAGCTTCTGCGGCATCTATACTTGAATGATATTCGGTTGGACATGTCTGTGCATAGACATAGCACTAATCCTCTGACCCAACTTCAGACATTGTGGGGGTTATTGGTGGACAAGAAGACCCCCGTGAAGGATGGTCTGAACAGGTTGGTTAATCTCAGAAAATTGGGTCTCACATGCCACTCAATCTCCACGGAAGGAATAGGCCAGTGGATCTTAAGACTAACAGGCCTCAGGTCCTTAAAGTTGAGATGTAAGAATGAAATAGGCGAACCTTCATCACTCCATCTACCGTCTTTGGCGAATCTCCAGCACCTCACACATGTTTATTTGCTGGGTAGATTACCAAAGTTAAATGAAAAGTTCGAATTCCCACCTCAACTCAGAGTCCTAACTTTATCAGTCTCAAAACTAGAGGATGATCCTATGCCAAAGCTAGCGCGGCTTAAAAACTTGTCCGTGCTGAGGCTTTTGGCTAATTCTTACACTGGAAAAAAAATGGATTGCCCTGAAGGAGGGTTTGGTTCACTTCGAGTTCTGAGACTATGGATGCTGGAAAATCTAGAGGAATGGGAGGTGGCAGAAGGAGCTATGAAGAACCTCCAAGAATTGGAAATCCGATGCTGCAGTAGCCTTAAAGCAGTTCCAGATAGAGTGCTGAAATCTAGTACCTTTGAAAAATTGAATCTAATAAATATGTCGCCGGCATTTGTTGCAGATTGTGAAGCTAAAAAGCAGGAGAAAACAACCATGACCAAGGAAACATGGGAATTCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 ko04626 map04014 map04626
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

650

Amino Acids

74.83

Weight (kDa)

9.02

Isoelectric Point (pI)

53.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1005
AasI GACNNNNNNGTC 1 cut(s) 239
Acc36I ACCTGC 1 cut(s) 465
AccB1I GGYRCC 1 cut(s) 1101
AccB7I CCANNNNNTGG 1 cut(s) 1783
AccI GTMKAC 1 cut(s) 231
AccII CGCG 2 cut(s) 256, 1615
AciI CCGC 3 cut(s) 146, 1186, 1615
AclWI GGATC 3 cut(s) 785, 1394, 1589
AcsI RAATTY 2 cut(s) 1541, 1943
AcuI CTGAAG 4 cut(s) 326, 1041, 1244, 1704
AfaI GTAC 2 cut(s) 1162, 1843
AfiI CCNNNNNNNGG 7 cut(s) 471, 688, 907, 1303, 1638, 1688, 1783
AflII CTTAAG 1 cut(s) 1390
AflIII ACRYGT 2 cut(s) 1218, 1495
AgsI TTSAA 5 cut(s) 59, 995, 1201, 1850, 1858
AjnI CCWGG 3 cut(s) 574, 844, 1122
AjuI GAANNNNNNNTTGG 2 cut(s) 1677, 1709
Alw21I GWGCWC 1 cut(s) 772
Alw26I GTCTC 7 cut(s) 588, 790, 845, 1112, 1349, 1582, 1708
Alw44I GTGCAC 1 cut(s) 768
AlwI GGATC 3 cut(s) 785, 1394, 1589
AlwNI CAGNNNCTG 1 cut(s) 788
AoxI GGCC 6 cut(s) 100, 301, 419, 473, 1378, 1402
ApaLI GTGCAC 1 cut(s) 768
ApeKI GCWGC 3 cut(s) 5, 327, 1797
ApoI RAATTY 2 cut(s) 1541, 1943
Asp700I GAANNNNTTC 2 cut(s) 636, 696
AspLEI GCGC 3 cut(s) 396, 879, 1615
AspS9I GGNCC 5 cut(s) 100, 419, 454, 1068, 1410
AsuHPI GGTGA 3 cut(s) 34, 634, 860
AsuII TTCGAA 1 cut(s) 1539
AsuNHI GCTAGC 1 cut(s) 1609
AvaII GGWCC 3 cut(s) 454, 1068, 1410
AxyI CCTNAGG 3 cut(s) 450, 470, 1406
BaeGI GKGCMC 2 cut(s) 772, 1104
BanI GGYRCC 1 cut(s) 1101
BarI GAAGNNNNNNTAC 2 cut(s) 501, 533
BauI CACGAG 1 cut(s) 765
BbsI GAAGAC 1 cut(s) 1298
Bbv12I GWGCWC 1 cut(s) 772
BbvCI CCTCAGC 4 cut(s) 9, 96, 723, 1637
BbvI GCAGC 2 cut(s) 339, 1784
BccI CCATC 4 cut(s) 181, 656, 1301, 1467
BceAI ACGGC 1 cut(s) 666
BciT130I CCWGG 3 cut(s) 576, 846, 1124
BcoDI GTCTC 7 cut(s) 588, 790, 845, 1112, 1349, 1582, 1708
BfaI CTAG 6 cut(s) 611, 1115, 1586, 1610, 1736, 1839
BfmI CTRYAG 2 cut(s) 325, 1798
BfoI RGCGCY 1 cut(s) 397
BfrI CTTAAG 1 cut(s) 1390
BfuAI ACCTGC 1 cut(s) 465
BisI GCNGC 5 cut(s) 6, 328, 1187, 1616, 1798
BlsI GCNGC 5 cut(s) 7, 329, 1188, 1617, 1799
Bme1390I CCNGG 3 cut(s) 576, 846, 1124
Bme18I GGWCC 3 cut(s) 454, 1068, 1410
BmgT120I GGNCC 5 cut(s) 100, 419, 454, 1068, 1410
BmiI GGNNCC 2 cut(s) 420, 1103
BmrFI CCNGG 3 cut(s) 576, 846, 1124
BmrI ACTGGG 1 cut(s) 790
BmsI GCATC 7 cut(s) 21, 133, 785, 1069, 1198, 1713, 1784
BmtI GCTAGC 1 cut(s) 1613
BmuI ACTGGG 1 cut(s) 790
BpiI GAAGAC 1 cut(s) 1298
BpmI CTGGAG 2 cut(s) 570, 1466
Bpu10I CCTNAGC 4 cut(s) 9, 96, 723, 1637
Bpu14I TTCGAA 1 cut(s) 1539
BpuEI CTTGAG 2 cut(s) 157, 1066
BsaI GGTCTC 2 cut(s) 1112, 1349
BsaJI CCNNGG 5 cut(s) 748, 844, 1122, 1365, 1929
BsaXI ACNNNNNCTCC 4 cut(s) 446, 476, 1346, 1376
Bsc4I CCNNNNNNNGG 7 cut(s) 471, 688, 907, 1303, 1638, 1688, 1783
Bse118I RCCGGY 2 cut(s) 772, 1876
Bse1I ACTGG 4 cut(s) 624, 796, 1381, 1666
Bse21I CCTNAGG 3 cut(s) 450, 470, 1406
Bse3DI GCAATG 1 cut(s) 285
BseBI CCWGG 3 cut(s) 576, 846, 1124
BseDI CCNNGG 5 cut(s) 748, 844, 1122, 1365, 1929
BseGI GGATG 6 cut(s) 192, 1084, 1132, 1312, 1597, 1728
BseLI CCNNNNNNNGG 7 cut(s) 471, 688, 907, 1303, 1638, 1688, 1783
BseMI GCAATG 1 cut(s) 285
BseNI ACTGG 4 cut(s) 624, 796, 1381, 1666
BseRI GAGGAG 1 cut(s) 277
BseSI GKGCMC 2 cut(s) 772, 1104
BseXI GCAGC 2 cut(s) 339, 1784
BseYI CCCAGC 2 cut(s) 1027, 1507
Bsh1236I CGCG 2 cut(s) 256, 1615
BshFI GGCC 6 cut(s) 102, 303, 421, 475, 1380, 1404
BshNI GGYRCC 1 cut(s) 1101
BsiHKAI GWGCWC 1 cut(s) 772
BsiSI CCGG 3 cut(s) 689, 773, 1877
BslI CCNNNNNNNGG 7 cut(s) 471, 688, 907, 1303, 1638, 1688, 1783
BsmAI GTCTC 7 cut(s) 588, 790, 845, 1112, 1349, 1582, 1708
BsnI GGCC 6 cut(s) 102, 303, 421, 475, 1380, 1404
Bso31I GGTCTC 2 cut(s) 1112, 1349
Bsp119I TTCGAA 1 cut(s) 1539
Bsp1286I GDGCHC 2 cut(s) 772, 1104
Bsp143I GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
Bsp19I CCATGG 1 cut(s) 748
BspACI CCGC 3 cut(s) 146, 1186, 1615
BspANI GGCC 6 cut(s) 102, 303, 421, 475, 1380, 1404
BspFNI CGCG 2 cut(s) 256, 1615
BspLI GGNNCC 2 cut(s) 420, 1103
BspMAI CTGCAG 2 cut(s) 329, 1802
BspMI ACCTGC 1 cut(s) 465
BspOI GCTAGC 1 cut(s) 1613
BspPI GGATC 3 cut(s) 785, 1394, 1589
BspQI GCTCTTC 2 cut(s) 1017, 1089
BspT104I TTCGAA 1 cut(s) 1539
BspT107I GGYRCC 1 cut(s) 1101
BspTI CTTAAG 1 cut(s) 1390
BspTNI GGTCTC 2 cut(s) 1112, 1349
BsrDI GCAATG 1 cut(s) 285
BsrFI RCCGGY 2 cut(s) 772, 1876
BsrI ACTGG 4 cut(s) 624, 796, 1381, 1666
BssAI RCCGGY 2 cut(s) 772, 1876
BssECI CCNNGG 5 cut(s) 748, 844, 1122, 1365, 1929
BssMI GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
BssSI CACGAG 1 cut(s) 765
BssT1I CCWWGG 2 cut(s) 748, 1929
Bst2BI CACGAG 1 cut(s) 765
Bst2UI CCWGG 3 cut(s) 576, 846, 1124
Bst4CI ACNGT 2 cut(s) 570, 1467
Bst6I CTCTTC 3 cut(s) 622, 1017, 1089
BstAFI CTTAAG 1 cut(s) 1390
BstAPI GCANNNNNTGC 1 cut(s) 1886
BstBI TTCGAA 1 cut(s) 1539
BstC8I GCNNGC 5 cut(s) 549, 825, 918, 1611, 1878
BstDSI CCRYGG 2 cut(s) 748, 1365
BstENI CCTNNNNNAGG 1 cut(s) 1686
BstF5I GGATG 6 cut(s) 192, 1084, 1132, 1312, 1597, 1728
BstFNI CGCG 2 cut(s) 256, 1615
BstH2I RGCGCY 1 cut(s) 397
BstHHI GCGC 3 cut(s) 396, 879, 1615
BstKTI GATC 8 cut(s) 72, 91, 269, 445, 793, 991, 1389, 1597
BstMAI GTCTC 7 cut(s) 588, 790, 845, 1112, 1349, 1582, 1708
BstMBI GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
BstNI CCWGG 3 cut(s) 576, 846, 1124
BstNSI RCATGY 7 cut(s) 52, 681, 707, 827, 1222, 1353, 1499
BstSCI CCNGG 3 cut(s) 574, 844, 1122
BstSFI CTRYAG 2 cut(s) 325, 1798
BstSLI GKGCMC 2 cut(s) 772, 1104
BstUI CGCG 2 cut(s) 256, 1615
BstV1I GCAGC 2 cut(s) 339, 1784
BstV2I GAAGAC 1 cut(s) 1298
BstX2I RGATCY 1 cut(s) 1386
BstXI CCANNNNNNTGG 1 cut(s) 52
BstYI RGATCY 1 cut(s) 1386
Bsu36I CCTNAGG 3 cut(s) 450, 470, 1406
BsuRI GGCC 6 cut(s) 102, 303, 421, 475, 1380, 1404
BtgI CCRYGG 2 cut(s) 748, 1365
BtsCI GGATG 6 cut(s) 192, 1084, 1132, 1312, 1597, 1728
BtsIMutI CAGTG 2 cut(s) 1388, 1659
BveI ACCTGC 1 cut(s) 465
Cac8I GCNNGC 5 cut(s) 549, 825, 918, 1611, 1878
CaiI CAGNNNCTG 1 cut(s) 788
CfoI GCGC 3 cut(s) 396, 879, 1615
Cfr10I RCCGGY 2 cut(s) 772, 1876
Cfr13I GGNCC 5 cut(s) 100, 419, 454, 1068, 1410
Csp6I GTAC 2 cut(s) 1161, 1842
CspCI CAANNNNNGTGG 2 cut(s) 492, 527
CviQI GTAC 2 cut(s) 1161, 1842
DpnI GATC 8 cut(s) 71, 90, 268, 444, 792, 990, 1388, 1596
DpnII GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
DrdI GACNNNNNNGTC 1 cut(s) 239
DseDI GACNNNNNNGTC 1 cut(s) 239
Eam1104I CTCTTC 3 cut(s) 622, 1017, 1089
EarI CTCTTC 3 cut(s) 622, 1017, 1089
Eco130I CCWWGG 2 cut(s) 748, 1929
Eco147I AGGCCT 3 cut(s) 303, 475, 1404
Eco31I GGTCTC 2 cut(s) 1112, 1349
Eco47I GGWCC 3 cut(s) 454, 1068, 1410
Eco57I CTGAAG 4 cut(s) 326, 1041, 1244, 1704
Eco81I CCTNAGG 3 cut(s) 450, 470, 1406
EcoNI CCTNNNNNAGG 1 cut(s) 1686
EcoO109I RGGNCCY 3 cut(s) 100, 454, 1410
EcoRI GAATTC 2 cut(s) 1541, 1943
EcoRII CCWGG 3 cut(s) 574, 844, 1122
EcoT14I CCWWGG 2 cut(s) 748, 1929
EcoT22I ATGCAT 1 cut(s) 973
ErhI CCWWGG 2 cut(s) 748, 1929
FblI GTMKAC 1 cut(s) 231
Fnu4HI GCNGC 5 cut(s) 6, 328, 1187, 1616, 1798
FokI GGATG 6 cut(s) 199, 1091, 1139, 1319, 1604, 1735
Fsp4HI GCNGC 5 cut(s) 6, 328, 1187, 1616, 1798
FspBI CTAG 6 cut(s) 611, 1115, 1586, 1610, 1736, 1839
GlaI GCGC 3 cut(s) 395, 878, 1614
GluI GCNGC 5 cut(s) 6, 328, 1187, 1616, 1798
GsaI CCCAGC 2 cut(s) 1031, 1511
GsuI CTGGAG 2 cut(s) 570, 1466
HaeII RGCGCY 1 cut(s) 397
HaeIII GGCC 6 cut(s) 102, 303, 421, 475, 1380, 1404
HapII CCGG 3 cut(s) 689, 773, 1877
HhaI GCGC 3 cut(s) 396, 879, 1615
Hin6I GCGC 3 cut(s) 394, 877, 1613
HinP1I GCGC 3 cut(s) 394, 877, 1613
HincII GTYRAC 1 cut(s) 232
HindII GTYRAC 1 cut(s) 232
HindIII AAGCTT 2 cut(s) 695, 1178
HinfI GANTC 6 cut(s) 62, 114, 637, 1477, 1560, 1858
HpaII CCGG 3 cut(s) 689, 773, 1877
HphI GGTGA 3 cut(s) 34, 634, 860
Hpy166II GTNNAC 6 cut(s) 232, 514, 770, 1068, 1285, 1700
Hpy188III TCNNGA 5 cut(s) 59, 587, 992, 1736, 1820
Hpy8I GTNNAC 6 cut(s) 232, 514, 770, 1068, 1285, 1700
Hpy99I CGWCG 5 cut(s) 70, 80, 233, 261, 813
HpyCH4III ACNGT 2 cut(s) 570, 1467
HspAI GCGC 3 cut(s) 394, 877, 1613
KroI GCCGGC 1 cut(s) 1876
KroNI GCCGGC 1 cut(s) 1878
Kzo9I GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
LguI GCTCTTC 2 cut(s) 1017, 1089
LmnI GCTCC 1 cut(s) 1760
Lsp1109I GCAGC 2 cut(s) 339, 1784
LweI GCATC 7 cut(s) 21, 133, 785, 1069, 1198, 1713, 1784
MaeI CTAG 6 cut(s) 611, 1115, 1586, 1610, 1736, 1839
MalI GATC 8 cut(s) 71, 90, 268, 444, 792, 990, 1388, 1596
MboI GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
MboII GAAGA 7 cut(s) 182, 540, 639, 1034, 1076, 1303, 1780
MflI RGATCY 1 cut(s) 1386
MhlI GDGCHC 2 cut(s) 772, 1104
MlyI GAGTC 1 cut(s) 1569
MmeI TCCRAC 2 cut(s) 99, 1194
Mph1103I ATGCAT 1 cut(s) 973
MroNI GCCGGC 1 cut(s) 1876
MroXI GAANNNNTTC 2 cut(s) 636, 696
MseI TTAA 8 cut(s) 834, 894, 1326, 1391, 1415, 1526, 1620, 1809
MslI CAYNNNNRTG 3 cut(s) 47, 521, 1223
MspCI CTTAAG 1 cut(s) 1390
MspI CCGG 3 cut(s) 689, 773, 1877
MspR9I CCNGG 3 cut(s) 576, 846, 1124
MvaI CCWGG 3 cut(s) 576, 846, 1124
MvnI CGCG 2 cut(s) 256, 1615
NaeI GCCGGC 1 cut(s) 1878
NcoI CCATGG 1 cut(s) 748
NdeII GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
NgoMIV GCCGGC 1 cut(s) 1876
NheI GCTAGC 1 cut(s) 1609
NlaIV GGNNCC 2 cut(s) 420, 1103
NsiI ATGCAT 1 cut(s) 973
NspI RCATGY 7 cut(s) 52, 681, 707, 827, 1222, 1353, 1499
NspV TTCGAA 1 cut(s) 1539
PaeI GCATGC 1 cut(s) 827
PceI AGGCCT 3 cut(s) 303, 475, 1404
PciI ACATGT 2 cut(s) 1218, 1495
PciSI GCTCTTC 2 cut(s) 1017, 1089
PdiI GCCGGC 1 cut(s) 1878
PdmI GAANNNNTTC 2 cut(s) 636, 696
PfeI GAWTC 5 cut(s) 62, 114, 637, 1477, 1858
PflFI GACNNNGTC 1 cut(s) 227
PflMI CCANNNNNTGG 1 cut(s) 1783
PkrI GCNGC 5 cut(s) 7, 329, 1188, 1617, 1799
PleI GAGTC 1 cut(s) 1568
PpsI GAGTC 1 cut(s) 1568
PpuMI RGGWCCY 2 cut(s) 454, 1410
PscI ACATGT 2 cut(s) 1218, 1495
PsiI TTATAA 1 cut(s) 1005
Psp5II RGGWCCY 2 cut(s) 454, 1410
Psp6I CCWGG 3 cut(s) 574, 844, 1122
PspFI CCCAGC 2 cut(s) 1027, 1507
PspGI CCWGG 3 cut(s) 574, 844, 1122
PspN4I GGNNCC 2 cut(s) 420, 1103
PspPI GGNCC 5 cut(s) 100, 419, 454, 1068, 1410
PspPPI RGGWCCY 2 cut(s) 454, 1410
PstI CTGCAG 2 cut(s) 329, 1802
PstNI CAGNNNCTG 1 cut(s) 788
PsuI RGATCY 1 cut(s) 1386
PsyI GACNNNGTC 1 cut(s) 227
RsaI GTAC 2 cut(s) 1162, 1843
RsaNI GTAC 2 cut(s) 1161, 1842
RseI CAYNNNNRTG 3 cut(s) 47, 521, 1223
SalI GTCGAC 1 cut(s) 230
SapI GCTCTTC 2 cut(s) 1017, 1089
SaqAI TTAA 8 cut(s) 834, 894, 1326, 1391, 1415, 1526, 1620, 1809
SatI GCNGC 5 cut(s) 6, 328, 1187, 1616, 1798
Sau3AI GATC 8 cut(s) 69, 88, 266, 442, 790, 988, 1386, 1594
Sau96I GGNCC 5 cut(s) 100, 419, 454, 1068, 1410
SchI GAGTC 1 cut(s) 1569
ScrFI CCNGG 3 cut(s) 576, 846, 1124
SduI GDGCHC 2 cut(s) 772, 1104
SfaNI GCATC 7 cut(s) 21, 133, 785, 1069, 1198, 1713, 1784
SfcI CTRYAG 2 cut(s) 325, 1798
SfuI TTCGAA 1 cut(s) 1539
SinI GGWCC 3 cut(s) 454, 1068, 1410
SmiMI CAYNNNNRTG 3 cut(s) 47, 521, 1223
SmlI CTYRAG 3 cut(s) 136, 1045, 1390
SmoI CTYRAG 3 cut(s) 136, 1045, 1390
SphI GCATGC 1 cut(s) 827
SseBI AGGCCT 3 cut(s) 303, 475, 1404
SsiI CCGC 3 cut(s) 146, 1186, 1615
SspMI CTAG 6 cut(s) 611, 1115, 1586, 1610, 1736, 1839
StuI AGGCCT 3 cut(s) 303, 475, 1404
StyD4I CCNGG 3 cut(s) 574, 844, 1122
StyI CCWWGG 2 cut(s) 748, 1929
TaaI ACNGT 2 cut(s) 570, 1467
TaqI TCGA 6 cut(s) 65, 231, 246, 269, 1539, 1705
TauI GCSGC 2 cut(s) 1189, 1618
TfiI GAWTC 5 cut(s) 62, 114, 637, 1477, 1858
Tru1I TTAA 8 cut(s) 834, 894, 1326, 1391, 1415, 1526, 1620, 1809
Tru9I TTAA 8 cut(s) 834, 894, 1326, 1391, 1415, 1526, 1620, 1809
TscAI CASTG 2 cut(s) 1388, 1666
TseI GCWGC 3 cut(s) 5, 327, 1797
TspDTI ATGAA 8 cut(s) 265, 350, 527, 1190, 1440, 1449, 1545, 1781
TspGWI ACGGA 3 cut(s) 274, 1382, 1621
TspRI CASTG 2 cut(s) 1388, 1666
Tth111I GACNNNGTC 1 cut(s) 227
Van91I CCANNNNNTGG 1 cut(s) 1783
Vha464I CTTAAG 1 cut(s) 1390
VneI GTGCAC 1 cut(s) 768
VpaK11BI GGWCC 3 cut(s) 454, 1068, 1410
XagI CCTNNNNNAGG 1 cut(s) 1686
XapI RAATTY 2 cut(s) 1541, 1943
XbaI TCTAGA 1 cut(s) 1735
XceI RCATGY 7 cut(s) 52, 681, 707, 827, 1222, 1353, 1499
XcmI CCANNNNNNNNNTGG 1 cut(s) 1164
XmiI GTMKAC 1 cut(s) 231
XmnI GAANNNNTTC 2 cut(s) 636, 696
XspI CTAG 6 cut(s) 611, 1115, 1586, 1610, 1736, 1839
Zsp2I ATGCAT 1 cut(s) 973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.