AT5G35450

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
5
Physical Location & Seq
Forward (+)
13666524 .. 13671200
4677 bp
Loading structure...
UTR
Exon/CDS
Intron
AT5G35450.1

Sequence Viewer

Length: 2706 bp
ATGGCTGAAGGAGTTGTGTCGTTTGGAGTTCAGAAGCTTTGGGCGCTTCTTAATCGAGAATCCGAGCGATTGAATGGAATAGATGAGCAAGTTGATGGACTAAAGCGTCAGCTGAGAGGGTTACAGTCGCTGTTGAAAGATGCAGATGCAAAGAAACATGGAAGTGATAGGGTGAGGAACTTCTTGGAAGATGTCAAAGACCTTGTTTTTGATGCTGAGGATATAATTGAATCCTATGTTCTGAACAAACTTAGAGGAGAAGGAAAAGGGGTCAAGAATCATGTGAGACGACTTGCTTGCTTCTTGACGGATCGCCACAAGGTTGCTTCAGATATCGAGGGTATCACTAAAAGGATCTCTAAGGTGATTGGGGAAATGCAGAGTTTAGGGATACAACAACAAATCATTGATGGTGGTCGTTCGCTGTCTCTTCAGGACATACAGAGGGAGATCCGGCAAACGTTTCCTAACAGCTCTGAAAGCGATCTTGTCGGGGTGGAGCAAAGTGTTGAAGAATTGGTTGGTCCTATGGTGGAAATTGATAACATTCAAGTGGTTTCTATATCTGGGATGGGCGGTATTGGTAAAACCACTTTGGCCAGACAAATCTTTCATCATGATTTAGTCCGGCGTCATTTTGATGGATTCGCATGGGTCTGTGTTTCGCAACAATTTACTCAGAAGCATGTTTGGCAGAGAATCTTGCAAGAACTTCGGCCACACGATGGTGAGATCTTACAGATGGACGAATATACAATCCAGGGTAAACTCTTTCAGTTGTTGGAAACCGGTAGATATTTGGTTGTCCTCGATGATGTATGGAAAGAAGAAGACTGGGATCGAATAAAAGAAGTGTTTCCACGGAAAAGAGGTTGGAAGATGCTACTTACTTCTCGAAATGAAGGAGTTGGGTTACATGCTGATCCAACATGTTTATCTTTTAGAGCAAGAATCCTAAATCCCAAAGAAAGTTGGAAGCTCTTTGAGAGGATAGTCCCTAGAAGAAATGAAACTGAATATGAAGAAATGGAAGCCATCGGAAAGGAAATGGTCACATATTGTGGAGGACTACCATTAGCTGTTAAAGTTTTGGGAGGCTTGTTAGCTAATAAACATACAGCTAGTGAGTGGAAAAGAGTTAGTGAGAATATCGGAGCTCAAATCGTAGGAAAATCGTGCTTAGATGACAACAGTCTCAATTCGGTTTACCGAATATTGTCTTTGAGTTATGAAGATTTGCCAACGGATTTAAAGCATTGTTTCCTTTACCTAGCCCATTTCCCTGAAGATTACAAGATAAAGACACGGACATTGTACAGTTACTGGGCCGCAGAGGGAATTTACGATGGATTAACCATCCTTGATAGTGGAGAAGACTACCTAGAAGAACTAGTGAGGAGAAATTTGGTTATTGCTGAAAAGAGCAATTTGAGTTGGAGACTTAAACTTTGTCAAATGCATGACATGATGAGGGAAGTATGTATATCTAAAGCCAAAGTAGAGAACTTCCTCCAAATTATCAAAGTCCCTACTTCCACCTCTACCATCATTGCTCAATCTCCTAGTAGATCTCGAAGACTCACCGTACATAGTGGTAAAGCCTTTCATATACTAGGACACAAAAAAAAGGTCAGATCTCTTTTAGTTTTGGGACTCAAGGAAGATCTTTGGATACAATCAGCTTCACGCTTCCAAAGCTTACCATTGCTCAGGGTGTTGGATCTGTCTTCGGTAAAATTTGAAGGAGGGAAGTTACCTTCTAGCATTGGAGGGCTCATCCATTTGAGATTCTTGAGCTTACACCAAGCTGTGGTATCTCATCTACCTTCTACTATTCGGAATTTAAAGCTTATGCTCTATTTGAACTTACATGTTGCTATCGGGGTGCCGGTTCACGTGCCAAATGTTTTGAAAGAGATGCTAGAGTTGAGGTACCTTTCCCTACCTCTGGATATGCATGATAAAACCAAGTTGGAATTGGGTGATCTAGTGAACCTGGAGTACTTGTGGTGTTTCTCAACGCAACACAGTAGTGTGACAGACCTCCTCCGTATGACCAAGCTCAGGTTTTTCGGTGTATCTTTTAGTGAAAGGTGTACTTTTGAAAATCTATCTTCATCTCTCCGTCAATTTCGAAAGCTGGAGACACTTAGTTTCATTTATTCGCGCAAAACCTATATGGTTGATTATGTGGGAGAATTCGTTCTGGATTTTATTCATCTAAAGAAGTTAAGTTTGGGAGTACATTTGTCAAAGATTCCTGATCAACATCAATTACCTCCCCACATTGCACACATATATTTATTGTTTTGCCACATGGAGGAGGATCCAATGCCAATTCTAGAAAAGTTGCTTCATCTGAAGTCGGTTGAATTAAGACGCAAGGCTTTCATAGGGAGGAGAATGGTGTGCTCAAAAGGCGGGTTTCCTCAATTACGTGCTCTACAAATATCTGAACAATCGGAGTTGGAAGAGTGGATAGTAGAAGAAGGGTCGATGCCATGTCTTCGTGATTTAATTATACATAGTTGCGAAAAGTTGGAGGAACTTCCTGACGGACTCAAGTATGTAACATCCTTAAAGGAACTGAAGATTGAAGGAATGAAGAGGGAGTGGAAGGAGAAATTGGTTGGAGAAGATTACTACAAAGTCCAACACATTCCCGATGTTCAATTTTTCAACTGTGACGACGAACAAAGAGAATAA

Protein Analysis

901

Amino Acids

103.77

Weight (kDa)

7.4

Isoelectric Point (pI)

49.54

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 90 2.3e-19 Rx N-terminal domain
NB-ARC PF00931 167 - 335 6.6e-55 NB-ARC domain
WHD_DRP PF23559 427 - 493 6e-11 Disease resistance protein Winged helix domain
LRR_14 PF23598 543 - 874 1.2e-32 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 105
Acc65I GGTACC 1 cut(s) 1932
AccB1I GGYRCC 2 cut(s) 1885, 1932
AccB7I CCANNNNNTGG 2 cut(s) 725, 1810
AccII CGCG 1 cut(s) 2167
AciI CCGC 3 cut(s) 576, 1329, 2421
AclI AACGTT 1 cut(s) 461
AclWI GGATC 8 cut(s) 318, 362, 445, 846, 917, 1728, 2321, 2334
AcoI YGGCCR 2 cut(s) 597, 716
AcsI RAATTY 5 cut(s) 1338, 1402, 1736, 1840, 2198
AcuI CTGAAG 6 cut(s) 27, 312, 416, 1305, 2381, 2609
AcvI CACGTG 1 cut(s) 1897
AcyI GRCGYC 1 cut(s) 631
AfaI GTAC 6 cut(s) 1316, 1587, 1934, 2003, 2098, 2244
AfiI CCNNNNNNNGG 5 cut(s) 725, 1810, 1948, 2064, 2320
AflIII ACRYGT 2 cut(s) 929, 1870
AgeI ACCGGT 1 cut(s) 788
AhlI ACTAGT 1 cut(s) 1390
AjnI CCWGG 2 cut(s) 759, 1995
AjuI GAANNNNNNNTTGG 6 cut(s) 504, 536, 2219, 2251, 2609, 2641
AleI CACNNNNGTG 2 cut(s) 726, 2031
AloI GAACNNNNNNTCC 2 cut(s) 2187, 2219
Alw21I GWGCWC 3 cut(s) 1159, 2414, 2443
Alw26I GTCTC 5 cut(s) 280, 432, 1199, 1432, 2138
AlwI GGATC 8 cut(s) 318, 362, 445, 846, 917, 1728, 2321, 2334
AlwNI CAGNNNCTG 2 cut(s) 130, 1323
AoxI GGCC 3 cut(s) 597, 716, 1326
ApoI RAATTY 5 cut(s) 1338, 1402, 1736, 1840, 2198
ArsI GACNNNNNNTTYG 6 cut(s) 191, 223, 1431, 1463, 1614, 1646
AsiGI ACCGGT 1 cut(s) 788
Asp700I GAANNNNTTC 2 cut(s) 855, 2202
Asp718I GGTACC 1 cut(s) 1932
AspLEI GCGC 2 cut(s) 46, 2169
AspS9I GGNCC 2 cut(s) 524, 1326
AsuHPI GGTGA 5 cut(s) 184, 376, 740, 1573, 1994
AsuII TTCGAA 1 cut(s) 2134
AvaII GGWCC 1 cut(s) 524
BalI TGGCCA 1 cut(s) 599
BamHI GGATCC 1 cut(s) 2326
BanI GGYRCC 2 cut(s) 1885, 1932
BanII GRGCYC 2 cut(s) 1159, 1776
BbrPI CACGTG 1 cut(s) 1897
BbsI GAAGAC 5 cut(s) 837, 1380, 1582, 1719, 2498
Bbv12I GWGCWC 3 cut(s) 1159, 2414, 2443
BbvCI CCTCAGC 1 cut(s) 216
BcgI CGANNNNNNTGC 4 cut(s) 279, 313, 695, 729
BciT130I CCWGG 2 cut(s) 761, 1997
BciVI GTATCC 2 cut(s) 384, 1665
BclI TGATCA 1 cut(s) 2263
BcoDI GTCTC 5 cut(s) 280, 432, 1199, 1432, 2138
BcuI ACTAGT 1 cut(s) 1390
BfoI RGCGCY 1 cut(s) 47
BfuI GTATCC 2 cut(s) 384, 1665
BglII AGATCT 4 cut(s) 732, 1568, 1634, 1663
BisI GCNGC 1 cut(s) 1329
BlsI GCNGC 1 cut(s) 1330
BmcAI AGTACT 1 cut(s) 2003
Bme1390I CCNGG 2 cut(s) 761, 1997
Bme18I GGWCC 1 cut(s) 524
BmgT120I GGNCC 2 cut(s) 524, 1326
BmiI GGNNCC 3 cut(s) 1887, 1934, 2328
BmrFI CCNGG 2 cut(s) 761, 1997
BmrI ACTGGG 2 cut(s) 844, 1333
BmsI GCATC 6 cut(s) 130, 136, 202, 870, 1908, 2487
BmuI ACTGGG 2 cut(s) 844, 1333
BoxI GACNNNNGTC 1 cut(s) 1191
BpiI GAAGAC 5 cut(s) 837, 1380, 1582, 1719, 2498
BpmI CTGGAG 2 cut(s) 2018, 2162
Bpu10I CCTNAGC 3 cut(s) 216, 1709, 2063
Bpu14I TTCGAA 1 cut(s) 2134
BpuEI CTTGAG 3 cut(s) 1640, 1813, 2546
BsaAI YACGTR 2 cut(s) 1897, 2438
BsaBI GATNNNNATC 1 cut(s) 2268
BsaHI GRCGYC 1 cut(s) 631
BsaJI CCNNGG 2 cut(s) 760, 860
BsaWI WCCGGW 1 cut(s) 788
BsaXI ACNNNNNCTCC 4 cut(s) 1991, 2021, 2187, 2217
Bsc4I CCNNNNNNNGG 5 cut(s) 725, 1810, 1948, 2064, 2320
Bse118I RCCGGY 2 cut(s) 788, 1888
Bse1I ACTGG 2 cut(s) 839, 1328
Bse3DI GCAATG 3 cut(s) 1548, 1703, 2286
Bse8I GATNNNNATC 1 cut(s) 2268
BseBI CCWGG 2 cut(s) 761, 1997
BseDI CCNNGG 2 cut(s) 760, 860
BseGI GGATG 4 cut(s) 576, 1356, 1776, 2573
BseJI GATNNNNATC 1 cut(s) 2268
BseLI CCNNNNNNNGG 5 cut(s) 725, 1810, 1948, 2064, 2320
BseMI GCAATG 3 cut(s) 1548, 1703, 2286
BseMII CTCAG 5 cut(s) 104, 207, 692, 1723, 2077
BseNI ACTGG 2 cut(s) 839, 1328
BseRI GAGGAG 5 cut(s) 270, 1411, 2036, 2336, 2413
Bsh1236I CGCG 1 cut(s) 2167
BshFI GGCC 3 cut(s) 599, 718, 1328
BshNI GGYRCC 2 cut(s) 1885, 1932
BshTI ACCGGT 1 cut(s) 788
BsiHKAI GWGCWC 3 cut(s) 1159, 2414, 2443
BsiSI CCGG 4 cut(s) 454, 628, 789, 1889
BslFI GGGAC 3 cut(s) 980, 1511, 1665
BslI CCNNNNNNNGG 5 cut(s) 725, 1810, 1948, 2064, 2320
BsmAI GTCTC 5 cut(s) 280, 432, 1199, 1432, 2138
BsmBI CGTCTC 1 cut(s) 280
BsmFI GGGAC 3 cut(s) 980, 1511, 1665
BsnI GGCC 3 cut(s) 599, 718, 1328
Bsp119I TTCGAA 1 cut(s) 2134
Bsp1286I GDGCHC 4 cut(s) 1159, 1776, 2414, 2443
Bsp1407I TGTACA 1 cut(s) 1314
BspACI CCGC 3 cut(s) 576, 1329, 2421
BspANI GGCC 3 cut(s) 599, 718, 1328
BspCNI CTCAG 5 cut(s) 105, 208, 691, 1722, 2076
BspFNI CGCG 1 cut(s) 2167
BspHI TCATGA 1 cut(s) 616
BspLI GGNNCC 3 cut(s) 1887, 1934, 2328
BspPI GGATC 8 cut(s) 318, 362, 445, 846, 917, 1728, 2321, 2334
BspT104I TTCGAA 1 cut(s) 2134
BspT107I GGYRCC 2 cut(s) 1885, 1932
BsrDI GCAATG 3 cut(s) 1548, 1703, 2286
BsrFI RCCGGY 2 cut(s) 788, 1888
BsrGI TGTACA 1 cut(s) 1314
BsrI ACTGG 2 cut(s) 839, 1328
BssAI RCCGGY 2 cut(s) 788, 1888
BssECI CCNNGG 2 cut(s) 760, 860
BssNI GRCGYC 1 cut(s) 631
Bst2UI CCWGG 2 cut(s) 761, 1997
Bst4CI ACNGT 6 cut(s) 126, 1193, 1319, 1585, 2030, 2684
Bst6I CTCTTC 3 cut(s) 435, 2466, 2600
BstACI GRCGYC 1 cut(s) 631
BstAUI TGTACA 1 cut(s) 1314
BstBAI YACGTR 2 cut(s) 1897, 2438
BstBI TTCGAA 1 cut(s) 2134
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 9 cut(s) 113, 216, 251, 360, 678, 1180, 1709, 2063, 2150
BstDSI CCRYGG 1 cut(s) 860
BstF5I GGATG 4 cut(s) 576, 1356, 1776, 2573
BstFNI CGCG 1 cut(s) 2167
BstH2I RGCGCY 1 cut(s) 47
BstHHI GCGC 2 cut(s) 46, 2169
BstMAI GTCTC 5 cut(s) 280, 432, 1199, 1432, 2138
BstMWI GCNNNNNNNGC 5 cut(s) 43, 480, 691, 1695, 2418
BstNI CCWGG 2 cut(s) 761, 1997
BstNSI RCATGY 4 cut(s) 689, 920, 933, 1874
BstPAI GACNNNNGTC 1 cut(s) 1191
BstSCI CCNGG 2 cut(s) 759, 1995
BstUI CGCG 1 cut(s) 2167
BstV2I GAAGAC 5 cut(s) 837, 1380, 1582, 1719, 2498
BstX2I RGATCY 8 cut(s) 354, 450, 732, 1568, 1634, 1663, 1720, 2326
BstYI RGATCY 8 cut(s) 354, 450, 732, 1568, 1634, 1663, 1720, 2326
BsuI GTATCC 2 cut(s) 384, 1665
BsuRI GGCC 3 cut(s) 599, 718, 1328
BtgI CCRYGG 1 cut(s) 860
BtsCI GGATG 4 cut(s) 576, 1356, 1776, 2573
Cac8I GCNNGC 1 cut(s) 298
CaiI CAGNNNCTG 2 cut(s) 130, 1323
CciI TCATGA 1 cut(s) 616
CfoI GCGC 2 cut(s) 46, 2169
Cfr10I RCCGGY 2 cut(s) 788, 1888
Cfr13I GGNCC 2 cut(s) 524, 1326
CseI GACGC 3 cut(s) 95, 620, 2388
Csp6I GTAC 6 cut(s) 1315, 1586, 1933, 2002, 2097, 2243
CspAI ACCGGT 1 cut(s) 788
CviQI GTAC 6 cut(s) 1315, 1586, 1933, 2002, 2097, 2243
DdeI CTNAG 9 cut(s) 113, 216, 251, 360, 678, 1180, 1709, 2063, 2150
DraI TTTAAA 2 cut(s) 1251, 1845
DrdI GACNNNNNNGTC 1 cut(s) 105
DseDI GACNNNNNNGTC 1 cut(s) 105
EaeI YGGCCR 2 cut(s) 597, 716
Eam1104I CTCTTC 3 cut(s) 435, 2466, 2600
EarI CTCTTC 3 cut(s) 435, 2466, 2600
Ecl136II GAGCTC 1 cut(s) 1157
Eco24I GRGCYC 2 cut(s) 1159, 1776
Eco32I GATATC 1 cut(s) 334
Eco47I GGWCC 1 cut(s) 524
Eco53kI GAGCTC 1 cut(s) 1157
Eco57I CTGAAG 6 cut(s) 27, 312, 416, 1305, 2381, 2609
Eco72I CACGTG 1 cut(s) 1897
EcoICRI GAGCTC 1 cut(s) 1157
EcoRI GAATTC 1 cut(s) 2198
EcoRII CCWGG 2 cut(s) 759, 1995
EcoRV GATATC 1 cut(s) 334
EcoT22I ATGCAT 2 cut(s) 1461, 1959
EcoT38I GRGCYC 2 cut(s) 1159, 1776
Esp3I CGTCTC 1 cut(s) 280
FalI AAGNNNNNCTT 2 cut(s) 2083, 2115
FaqI GGGAC 3 cut(s) 980, 1511, 1665
FauI CCCGC 1 cut(s) 2414
FbaI TGATCA 1 cut(s) 2263
Fnu4HI GCNGC 1 cut(s) 1329
FokI GGATG 4 cut(s) 583, 1343, 1763, 2560
FriOI GRGCYC 2 cut(s) 1159, 1776
Fsp4HI GCNGC 1 cut(s) 1329
GlaI GCGC 2 cut(s) 45, 2168
GluI GCNGC 1 cut(s) 1329
GsuI CTGGAG 2 cut(s) 2018, 2162
HaeII RGCGCY 1 cut(s) 47
HaeIII GGCC 3 cut(s) 599, 718, 1328
HapII CCGG 4 cut(s) 454, 628, 789, 1889
HgaI GACGC 3 cut(s) 95, 620, 2388
HhaI GCGC 2 cut(s) 46, 2169
Hin1I GRCGYC 1 cut(s) 631
Hin6I GCGC 2 cut(s) 44, 2167
HinP1I GCGC 2 cut(s) 44, 2167
HindIII AAGCTT 3 cut(s) 35, 1696, 1847
HpaII CCGG 4 cut(s) 454, 628, 789, 1889
HphI GGTGA 5 cut(s) 184, 376, 740, 1573, 1994
Hpy166II GTNNAC 5 cut(s) 767, 1207, 1894, 1993, 2097
Hpy8I GTNNAC 5 cut(s) 767, 1207, 1894, 1993, 2097
Hpy99I CGWCG 1 cut(s) 2693
HpyAV CCTTC 8 cut(s) 254, 896, 1736, 1767, 1836, 2483, 2591, 2611
HpyCH4III ACNGT 6 cut(s) 126, 1193, 1319, 1585, 2030, 2684
HpyCH4IV ACGT 3 cut(s) 461, 1896, 2437
HpyCH4V TGCA 7 cut(s) 143, 149, 379, 706, 1459, 1957, 2291
HpyF10VI GCNNNNNNNGC 5 cut(s) 43, 480, 691, 1695, 2418
HpyF3I CTNAG 9 cut(s) 113, 216, 251, 360, 678, 1180, 1709, 2063, 2150
HpySE526I ACGT 3 cut(s) 461, 1896, 2437
Hsp92I GRCGYC 1 cut(s) 631
HspAI GCGC 2 cut(s) 44, 2167
KpnI GGTACC 1 cut(s) 1936
Ksp22I TGATCA 1 cut(s) 2263
LmnI GCTCC 2 cut(s) 499, 1154
LweI GCATC 6 cut(s) 130, 136, 202, 870, 1908, 2487
MaeII ACGT 3 cut(s) 461, 1896, 2437
MaeIII GTNAC 8 cut(s) 120, 912, 1051, 1319, 1752, 2035, 2569, 2684
MflI RGATCY 8 cut(s) 354, 450, 732, 1568, 1634, 1663, 1720, 2326
MhlI GDGCHC 4 cut(s) 1159, 1776, 2414, 2443
MlsI TGGCCA 1 cut(s) 599
MluNI TGGCCA 1 cut(s) 599
MlyI GAGTC 3 cut(s) 1572, 1647, 2553
Mox20I TGGCCA 1 cut(s) 599
Mph1103I ATGCAT 2 cut(s) 1461, 1959
MroXI GAANNNNTTC 2 cut(s) 855, 2202
MscI TGGCCA 1 cut(s) 599
MslI CAYNNNNRTG 5 cut(s) 162, 551, 639, 726, 2031
Msp20I TGGCCA 1 cut(s) 599
MspA1I CMGCKG 1 cut(s) 112
MspI CCGG 4 cut(s) 454, 628, 789, 1889
MspR9I CCNGG 2 cut(s) 761, 1997
MvaI CCWGG 2 cut(s) 761, 1997
MvnI CGCG 1 cut(s) 2167
MwoI GCNNNNNNNGC 5 cut(s) 43, 480, 691, 1695, 2418
NlaIV GGNNCC 3 cut(s) 1887, 1934, 2328
NmuCI GTSAC 3 cut(s) 1051, 2035, 2684
NsiI ATGCAT 2 cut(s) 1461, 1959
NspI RCATGY 4 cut(s) 689, 920, 933, 1874
NspV TTCGAA 1 cut(s) 2134
OliI CACNNNNGTG 2 cut(s) 726, 2031
PagI TCATGA 1 cut(s) 616
PciI ACATGT 2 cut(s) 929, 1870
PdmI GAANNNNTTC 2 cut(s) 855, 2202
PfeI GAWTC 8 cut(s) 59, 230, 277, 645, 699, 951, 1788, 2257
PflMI CCANNNNNTGG 2 cut(s) 725, 1810
PinAI ACCGGT 1 cut(s) 788
PkrI GCNGC 1 cut(s) 1330
PleI GAGTC 3 cut(s) 1572, 1647, 2553
PmaCI CACGTG 1 cut(s) 1897
PmlI CACGTG 1 cut(s) 1897
PpsI GAGTC 3 cut(s) 1572, 1647, 2553
Ppu21I YACGTR 2 cut(s) 1897, 2438
PscI ACATGT 2 cut(s) 929, 1870
PshAI GACNNNNGTC 1 cut(s) 1191
Psp124BI GAGCTC 1 cut(s) 1159
Psp1406I AACGTT 1 cut(s) 461
Psp6I CCWGG 2 cut(s) 759, 1995
PspCI CACGTG 1 cut(s) 1897
PspGI CCWGG 2 cut(s) 759, 1995
PspN4I GGNNCC 3 cut(s) 1887, 1934, 2328
PspPI GGNCC 2 cut(s) 524, 1326
PsrI GAACNNNNNNTAC 2 cut(s) 1985, 2017
PstNI CAGNNNCTG 2 cut(s) 130, 1323
PsuI RGATCY 8 cut(s) 354, 450, 732, 1568, 1634, 1663, 1720, 2326
PvuII CAGCTG 1 cut(s) 112
RsaI GTAC 6 cut(s) 1316, 1587, 1934, 2003, 2098, 2244
RsaNI GTAC 6 cut(s) 1315, 1586, 1933, 2002, 2097, 2243
RseI CAYNNNNRTG 5 cut(s) 162, 551, 639, 726, 2031
SacI GAGCTC 1 cut(s) 1159
SatI GCNGC 1 cut(s) 1329
Sau96I GGNCC 2 cut(s) 524, 1326
ScaI AGTACT 1 cut(s) 2003
SchI GAGTC 3 cut(s) 1572, 1647, 2553
ScrFI CCNGG 2 cut(s) 761, 1997
SduI GDGCHC 4 cut(s) 1159, 1776, 2414, 2443
SfaNI GCATC 6 cut(s) 130, 136, 202, 870, 1908, 2487
SfuI TTCGAA 1 cut(s) 2134
SinI GGWCC 1 cut(s) 524
SmiMI CAYNNNNRTG 5 cut(s) 162, 551, 639, 726, 2031
SmlI CTYRAG 3 cut(s) 1655, 1792, 2561
SmoI CTYRAG 3 cut(s) 1655, 1792, 2561
SpeI ACTAGT 1 cut(s) 1390
SsiI CCGC 3 cut(s) 576, 1329, 2421
SspI AATATT 1 cut(s) 1215
SstI GAGCTC 1 cut(s) 1159
StyD4I CCNGG 2 cut(s) 759, 1995
TaaI ACNGT 6 cut(s) 126, 1193, 1319, 1585, 2030, 2684
TaiI ACGT 3 cut(s) 464, 1899, 2440
TaqI TCGA 8 cut(s) 55, 336, 810, 841, 895, 1573, 2134, 2495
TatI WGTACW 4 cut(s) 1314, 2001, 2096, 2242
TauI GCSGC 1 cut(s) 1331
TfiI GAWTC 8 cut(s) 59, 230, 277, 645, 699, 951, 1788, 2257
TseFI GTSAC 3 cut(s) 1051, 2035, 2684
Tsp45I GTSAC 3 cut(s) 1051, 2035, 2684
TspGWI ACGGA 7 cut(s) 323, 877, 1259, 1321, 2039, 2114, 2571
Van91I CCANNNNNTGG 2 cut(s) 725, 1810
VpaK11BI GGWCC 1 cut(s) 524
XapI RAATTY 5 cut(s) 1338, 1402, 1736, 1840, 2198
XbaI TCTAGA 1 cut(s) 2341
XceI RCATGY 4 cut(s) 689, 920, 933, 1874
XcmI CCANNNNNNNNNTGG 1 cut(s) 1975
XmnI GAANNNNTTC 2 cut(s) 855, 2202
ZrmI AGTACT 1 cut(s) 2003
Zsp2I ATGCAT 2 cut(s) 1461, 1959
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.