Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

9721472 .. 9726017

Gene Structure 4546 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1092100.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2403 bp

ATGTCCCCCTTTTTCTTATTCTATTTTATTAGCCGAAAGGTATTGTCCACTTGGTCACAAATCCAACAGAAGGAACAAAGGCAAAGTTATCCTCATGTTATTCAACGTGATGTTGTCGGGTTAGAGAAGGACAAAGAGAAATTAGTCTCGCAGTTGGTGAAAGAAGAAAAAGGCCTCCAAGTTGTATCTATTTGGGGGATGGGCGGTTCAGGAAAGACCACTCTTGCAAAACAAGTTTATGATCACAATGAAGCTATTAAGCGTCACTTCGATTGTTTTGCTTGGGTGTGTGTATCACAACAATGCCAAGGAAAAGAGGTTTTGGAAGATATTTTGATCAAGCTTACTCGTGCCACCGAAAAAGAGGACATAGAAGAAATTTTGAAAATGAAGAAGGAACAAATAGCAGAAAGGCTTTGCATCATCCAAAAAGAAAAGAAATGTTTGGTGGTTCTTGATGATATTTGGACTCCTGACGCGTGGAACTCTTTAAAACCTGGATTTCCAATTGGTGAGGAAACAAAGACTCGTATATTACTCACCACTCGGAAGAAGGACGTTGCTGAAATTGCTGGAGAAAATTGTTCTGTTCATGAATCTCGTATGCTAGATGATAAGGAAAGCTGGGAACTGTTTAAGAAGATAGCAATCTCTCGAAGAGATCAAACAAACTCTAAAATTGATGCTGAGAAGGAAGAACTAGGAAAGGAGATGCTTAAACATTGTGCAGGTCTACCATTAGCTATTACTGTGCTTGCGGGACTTCTAGCTAGAAAAGTCACAGTTGAGGAGTGGAAAACAGTAAACAAGAATGTCCATGCGTATATACGGAGAGGAACTAATCTTGATCAAGAATACAAAGGCGACCAAGAATATGCAGGTGCATTAAGGGTGTTAGCATTGAGTTATGACGAGTTACCATATCGTTTAAAACTATGCTTTCTATATTTAGGCCATTTTGCAGAGGATTATGAGATACCGGTCAAAAGATTGGCTCAGTTATGGATAGCAGAAGGTTTTATATCTTCAGCATCCCAAAGACATGGTTCAGCGGAAGTATTGGAAGATGTAGCATATACTTGCTTAAGTGAGTTGGTGCAAAGATGTATGGTTCAAGTTGGAACACTTGGTTCAACTAAGAAGATCAAAACATGTCATCTTCATGATCTTATGCGAGACTTGTGCTTGGTAAAGGCAGAAGAGGAGGACTTTCTTCACGTTGTAAATTTTACCAGCACGATAACCAAGACAGCGACAATTCCTAAAGGTCGAAGACTTGCTGTACATGTGGAAACAGAATTTGTTGATAAATTTGCTCCCACAAGAAATGACCACCTTAGGTCTTTGTTATTCTTTGTCGACCCAGAATATGGATTCTCCAACTGGAAGAAAAAATTCTTGCGGTCAGTAGTATGCAACTTCAAATTGCTCAGGGTTCTAAAGTTTGAAGGCATACGGAGAAAAGTAGAGTTGCCGAGTACTATTGGGAATCTAATCCACTTAAGGTTTTTAAGTCTAAGGGGAAGTAAAGTAAGACGGTTGCCATCATCTTTAGGTAATTTGGTATGTTTGCAAACTCTAGACTTACGCTTGCTTGTTGGGAGGGTGGTGAAAGTACCAAATGTGATTTGGAAGATGAAAGAATTGAGACATTTATATTTACCCGTATGGAACGGAGGGAGGTTGAAGTTGGCTGCTCTTGGGAATTTGCAGAGTTTAGTCAATATTGCAGGTGCTGATTGTGATTTGAATCATCTTGCTGAATTGACCAATCTCAGAAAACTGTTCGTATCAGGTGGGGTGGAAAATATGGAGGCAAAGTTGAAATCTACTGGCATCACATTTAACCATCTTCGATATCTATCTGTGCTCTGTCCTGCAGAAGGTATACCAATGAATATGGTATTGAGTTGTCCTCATATATACAAACTTCAATTGAGAGGGAGAATGAGAGATGGATCATTGGAAGGTCTCCAGTACTATCAGAACCTCACTAAGATGTCGCTGTGTGATACTAATCTACAGTTGGAGAGTCTCAAAATACTTGAGAAGATCCCAAACTTAAGAATGCTTTGGCTTGGTAGTTTTGCTTTGTCGATTGTTTCATCAGAAGTAGTTGTCTCAGAAGAAGGTTATCCTAATCTTGAATTTCTTTCACTTGATGGGTTGTGGGGATTAAAGAGTTGGAGCATAGAGAAAGGAGGCATGCCTAGTCTCTGCAGATTGTCTGTTCTCTGGTGCGCATTGAGGGCAGTTCCTGAGGGGCTTCAGCATGTTACTACCCTCAAGGAACTGACAATCAGACGCATGTCTCGGGAATTCTGTAGAAGGATTGGGGAGGGAGGAGAGGATTTCTACAAAATTCAACACGTGCCTTCTGTTATAATAACAGATATTCGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

801

Amino Acids

91.41

Weight (kDa)

8.99

Isoelectric Point (pI)

44.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NB-ARC	PF00931	42 - 221	6.3e-45	NB-ARC domain
WHD_DRP	PF23559	320 - 395	1e-16	Disease resistance protein Winged helix domain
LRR_14	PF23598	471 - 769	1.3e-31	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2384
AarI	CACCTGC	2 cut(s)	869, 1721
Acc16I	TGCGCA	1 cut(s)	2242
Acc36I	ACCTGC	3 cut(s)	719, 869, 1721
AccB7I	CCANNNNNTGG	1 cut(s)	1370
AccI	GTMKAC	3 cut(s)	733, 1359, 1888
AccII	CGCG	1 cut(s)	479
AciI	CCGC	4 cut(s)	204, 758, 1052, 1402
AclWI	GGATC	2 cut(s)	1966, 2047
AcsI	RAATTY	9 cut(s)	378, 1225, 1298, 1310, 1394, 1705, 2147, 2318, 2361
AcuI	CTGAAG	2 cut(s)	1011, 2252
AcvI	CACGTG	1 cut(s)	2371
AfaI	GTAC	4 cut(s)	1284, 1480, 1617, 1979
AfiI	CCNNNNNNNGG	3 cut(s)	70, 1370, 1883
AflII	CTTAAG	3 cut(s)	1084, 1501, 2062
AflIII	ACRYGT	4 cut(s)	477, 1151, 1285, 2368
AgeI	ACCGGT	1 cut(s)	979
AjnI	CCWGG	1 cut(s)	496
AloI	GAACNNNNNNTCC	2 cut(s)	190, 222
AluBI	AGCT	5 cut(s)	254, 343, 624, 743, 770
AluI	AGCT	5 cut(s)	254, 343, 624, 743, 770
Alw21I	GWGCWC	1 cut(s)	1872
Alw26I	GTCTC	8 cut(s)	151, 1170, 1642, 1976, 2039, 2125, 2219, 2316
AlwI	GGATC	2 cut(s)	1966, 2047
AlwNI	CAGNNNCTG	2 cut(s)	1736, 2258
Ama87I	CYCGRG	1 cut(s)	2313
AoxI	GGCC	2 cut(s)	172, 952
ApeKI	GCWGC	1 cut(s)	1694
ApoI	RAATTY	9 cut(s)	378, 1225, 1298, 1310, 1394, 1705, 2147, 2318, 2361
AsiGI	ACCGGT	1 cut(s)	979
Asp700I	GAANNNNTTC	1 cut(s)	1394
AspLEI	GCGC	1 cut(s)	2243
AsuHPI	GGTGA	4 cut(s)	169, 524, 532, 1621
AvaI	CYCGRG	1 cut(s)	2313
AxyI	CCTNAGG	2 cut(s)	1337, 2259
BauI	CACGAG	1 cut(s)	348
BbrPI	CACGTG	1 cut(s)	2371
BbsI	GAAGAC	1 cut(s)	1279
Bbv12I	GWGCWC	1 cut(s)	1872
BbvI	GCAGC	1 cut(s)	1681
BccI	CCATC	5 cut(s)	193, 1552, 1857, 1949, 2156
BcgI	CGANNNNNNTGC	4 cut(s)	260, 294, 1164, 1198
BciT130I	CCWGG	1 cut(s)	498
BclI	TGATCA	3 cut(s)	241, 336, 847
BcoDI	GTCTC	8 cut(s)	151, 1170, 1642, 1976, 2039, 2125, 2219, 2316
BfaI	CTAG	6 cut(s)	608, 701, 767, 771, 1580, 2211
BfmI	CTRYAG	4 cut(s)	1878, 2021, 2218, 2323
BfrI	CTTAAG	3 cut(s)	1084, 1501, 2062
BfuAI	ACCTGC	3 cut(s)	719, 869, 1721
BisI	GCNGC	1 cut(s)	1695
BlsI	GCNGC	1 cut(s)	1696
BmcAI	AGTACT	2 cut(s)	1480, 1979
Bme1390I	CCNGG	1 cut(s)	498
BmeT110I	CYCGRG	1 cut(s)	2313
BmrFI	CCNGG	1 cut(s)	498
BmsI	GCATC	5 cut(s)	429, 673, 702, 1040, 1845
BoxI	GACNNNNGTC	1 cut(s)	2308
BpiI	GAAGAC	1 cut(s)	1279
BplI	GAGNNNNNCTC	2 cut(s)	1900, 1932
BpmI	CTGGAG	2 cut(s)	594, 1958
Bpu10I	CCTNAGC	1 cut(s)	1430
BpuEI	CTTGAG	2 cut(s)	2066, 2270
BsaAI	YACGTR	1 cut(s)	2371
BsaBI	GATNNNNATC	4 cut(s)	647, 1749, 1861, 2016
BsaI	GGTCTC	1 cut(s)	1976
BsaJI	CCNNGG	1 cut(s)	307
BsaWI	WCCGGW	1 cut(s)	979
BsaXI	ACNNNNNCTCC	2 cut(s)	1805, 1835
Bsc4I	CCNNNNNNNGG	3 cut(s)	70, 1370, 1883
Bse118I	RCCGGY	1 cut(s)	979
Bse1I	ACTGG	3 cut(s)	1388, 1837, 1975
Bse21I	CCTNAGG	2 cut(s)	1337, 2259
Bse8I	GATNNNNATC	4 cut(s)	647, 1749, 1861, 2016
BseBI	CCWGG	1 cut(s)	498
BseDI	CCNNGG	1 cut(s)	307
BseGI	GGATG	3 cut(s)	204, 423, 1031
BseJI	GATNNNNATC	4 cut(s)	647, 1749, 1861, 2016
BseLI	CCNNNNNNNGG	3 cut(s)	70, 1370, 1883
BseMII	CTCAG	6 cut(s)	678, 1010, 1444, 1789, 2136, 2250
BseNI	ACTGG	3 cut(s)	1388, 1837, 1975
BseRI	GAGGAG	3 cut(s)	803, 1217, 2358
BseXI	GCAGC	1 cut(s)	1681
BseYI	CCCAGC	1 cut(s)	624
BsgI	GTGCAG	1 cut(s)	747
Bsh1236I	CGCG	1 cut(s)	479
BshFI	GGCC	2 cut(s)	174, 954
BshTI	ACCGGT	1 cut(s)	979
BsiHKAI	GWGCWC	1 cut(s)	1872
BsiHKCI	CYCGRG	1 cut(s)	2313
BsiSI	CCGG	1 cut(s)	980
BslFI	GGGAC	1 cut(s)	774
BslI	CCNNNNNNNGG	3 cut(s)	70, 1370, 1883
BsmAI	GTCTC	8 cut(s)	151, 1170, 1642, 1976, 2039, 2125, 2219, 2316
BsmFI	GGGAC	1 cut(s)	774
BsmI	GAATGC	1 cut(s)	2073
BsnI	GGCC	2 cut(s)	174, 954
Bso31I	GGTCTC	1 cut(s)	1976
BsoBI	CYCGRG	1 cut(s)	2313
Bsp1286I	GDGCHC	1 cut(s)	1872
Bsp1407I	TGTACA	1 cut(s)	1282
Bsp143I	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
BspACI	CCGC	4 cut(s)	204, 758, 1052, 1402
BspANI	GGCC	2 cut(s)	174, 954
BspCNI	CTCAG	6 cut(s)	679, 1009, 1443, 1788, 2135, 2251
BspFNI	CGCG	1 cut(s)	479
BspHI	TCATGA	2 cut(s)	592, 1162
BspMAI	CTGCAG	2 cut(s)	1882, 2222
BspMI	ACCTGC	3 cut(s)	719, 869, 1721
BspPI	GGATC	2 cut(s)	1966, 2047
BspTI	CTTAAG	3 cut(s)	1084, 1501, 2062
BspTNI	GGTCTC	1 cut(s)	1976
BsrFI	RCCGGY	1 cut(s)	979
BsrGI	TGTACA	1 cut(s)	1282
BsrI	ACTGG	3 cut(s)	1388, 1837, 1975
BssAI	RCCGGY	1 cut(s)	979
BssECI	CCNNGG	1 cut(s)	307
BssMI	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
BssNAI	GTATAC	1 cut(s)	1889
BssSI	CACGAG	1 cut(s)	348
BssT1I	CCWWGG	1 cut(s)	307
Bst1107I	GTATAC	1 cut(s)	1889
Bst2BI	CACGAG	1 cut(s)	348
Bst2UI	CCWGG	1 cut(s)	498
Bst4CI	ACNGT	7 cut(s)	633, 751, 784, 802, 1539, 1785, 2025
Bst6I	CTCTTC	2 cut(s)	652, 1194
BstAFI	CTTAAG	3 cut(s)	1084, 1501, 2062
BstAUI	TGTACA	1 cut(s)	1282
BstBAI	YACGTR	1 cut(s)	2371
BstC8I	GCNNGC	3 cut(s)	756, 1592, 2207
BstENI	CCTNNNNNAGG	1 cut(s)	1881
BstF5I	GGATG	3 cut(s)	204, 423, 1031
BstFNI	CGCG	1 cut(s)	479
BstHHI	GCGC	1 cut(s)	2243
BstKTI	GATC	8 cut(s)	244, 339, 664, 850, 1146, 1168, 1961, 2055
BstMAI	GTCTC	8 cut(s)	151, 1170, 1642, 1976, 2039, 2125, 2219, 2316
BstMBI	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
BstMWI	GCNNNNNNNGC	2 cut(s)	569, 2249
BstNI	CCWGG	1 cut(s)	498
BstNSI	RCATGY	5 cut(s)	1155, 1289, 2209, 2276, 2311
BstPAI	GACNNNNGTC	1 cut(s)	2308
BstSCI	CCNGG	1 cut(s)	496
BstSFI	CTRYAG	4 cut(s)	1878, 2021, 2218, 2323
BstUI	CGCG	1 cut(s)	479
BstV1I	GCAGC	1 cut(s)	1681
BstV2I	GAAGAC	1 cut(s)	1279
BstX2I	RGATCY	1 cut(s)	2052
BstXI	CCANNNNNNTGG	1 cut(s)	1043
BstYI	RGATCY	1 cut(s)	2052
BstZ17I	GTATAC	1 cut(s)	1889
Bsu36I	CCTNAGG	2 cut(s)	1337, 2259
BsuRI	GGCC	2 cut(s)	174, 954
BtsCI	GGATG	3 cut(s)	204, 423, 1031
BveI	ACCTGC	3 cut(s)	719, 869, 1721
Cac8I	GCNNGC	3 cut(s)	756, 1592, 2207
CaiI	CAGNNNCTG	2 cut(s)	1736, 2258
CciI	TCATGA	2 cut(s)	592, 1162
CfoI	GCGC	1 cut(s)	2243
Cfr10I	RCCGGY	1 cut(s)	979
CseI	GACGC	3 cut(s)	251, 485, 2313
Csp6I	GTAC	4 cut(s)	1283, 1479, 1616, 1978
CspAI	ACCGGT	1 cut(s)	979
CviQI	GTAC	4 cut(s)	1283, 1479, 1616, 1978
DpnI	GATC	8 cut(s)	243, 338, 663, 849, 1145, 1167, 1960, 2054
DpnII	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
DraI	TTTAAA	2 cut(s)	492, 930
Eam1104I	CTCTTC	2 cut(s)	652, 1194
EarI	CTCTTC	2 cut(s)	652, 1194
Eco130I	CCWWGG	1 cut(s)	307
Eco147I	AGGCCT	1 cut(s)	174
Eco31I	GGTCTC	1 cut(s)	1976
Eco32I	GATATC	1 cut(s)	1859
Eco57I	CTGAAG	2 cut(s)	1011, 2252
Eco72I	CACGTG	1 cut(s)	2371
Eco81I	CCTNAGG	2 cut(s)	1337, 2259
Eco88I	CYCGRG	1 cut(s)	2313
EcoNI	CCTNNNNNAGG	1 cut(s)	1881
EcoRI	GAATTC	1 cut(s)	2318
EcoRII	CCWGG	1 cut(s)	496
EcoRV	GATATC	1 cut(s)	1859
EcoT14I	CCWWGG	1 cut(s)	307
ErhI	CCWWGG	1 cut(s)	307
FalI	AAGNNNNNCTT	2 cut(s)	251, 283
FaqI	GGGAC	1 cut(s)	774
FauI	CCCGC	1 cut(s)	751
FbaI	TGATCA	3 cut(s)	241, 336, 847
FblI	GTMKAC	3 cut(s)	733, 1359, 1888
Fnu4HI	GCNGC	1 cut(s)	1695
FokI	GGATG	3 cut(s)	211, 410, 1018
Fsp4HI	GCNGC	1 cut(s)	1695
FspAI	RTGCGCAY	1 cut(s)	2242
FspBI	CTAG	6 cut(s)	608, 701, 767, 771, 1580, 2211
FspI	TGCGCA	1 cut(s)	2242
GlaI	GCGC	1 cut(s)	2242
GluI	GCNGC	1 cut(s)	1695
GsaI	CCCAGC	1 cut(s)	628
GsuI	CTGGAG	2 cut(s)	594, 1958
HaeIII	GGCC	2 cut(s)	174, 954
HapII	CCGG	1 cut(s)	980
HgaI	GACGC	3 cut(s)	251, 485, 2313
HhaI	GCGC	1 cut(s)	2243
Hin6I	GCGC	1 cut(s)	2241
HinP1I	GCGC	1 cut(s)	2241
HincII	GTYRAC	1 cut(s)	1360
HindII	GTYRAC	1 cut(s)	1360
HindIII	AAGCTT	1 cut(s)	341
HinfI	GANTC	7 cut(s)	469, 526, 596, 1374, 1489, 1750, 2032
HpaII	CCGG	1 cut(s)	980
HphI	GGTGA	4 cut(s)	169, 524, 532, 1621
Hpy166II	GTNNAC	5 cut(s)	48, 734, 805, 1360, 1889
Hpy188I	TCNGA	6 cut(s)	549, 1778, 1986, 2110, 2125, 2303
Hpy8I	GTNNAC	5 cut(s)	48, 734, 805, 1360, 1889
HpyCH4III	ACNGT	7 cut(s)	633, 751, 784, 802, 1539, 1785, 2025
HpyCH4IV	ACGT	4 cut(s)	106, 558, 1218, 2370
HpyF10VI	GCNNNNNNNGC	2 cut(s)	569, 2249
HpySE526I	ACGT	4 cut(s)	106, 558, 1218, 2370
HspAI	GCGC	1 cut(s)	2241
Ksp22I	TGATCA	3 cut(s)	241, 336, 847
Kzo9I	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
LmnI	GCTCC	2 cut(s)	1321, 2187
Lsp1109I	GCAGC	1 cut(s)	1681
LweI	GCATC	5 cut(s)	429, 673, 702, 1040, 1845
MaeI	CTAG	6 cut(s)	608, 701, 767, 771, 1580, 2211
MaeII	ACGT	4 cut(s)	106, 558, 1218, 2370
MaeIII	GTNAC	5 cut(s)	54, 263, 778, 915, 2275
MalI	GATC	8 cut(s)	243, 338, 663, 849, 1145, 1167, 1960, 2054
MboI	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
MfeI	CAATTG	2 cut(s)	507, 1934
MflI	RGATCY	1 cut(s)	2052
MhlI	GDGCHC	1 cut(s)	1872
MluI	ACGCGT	1 cut(s)	477
MlyI	GAGTC	3 cut(s)	463, 520, 2041
MmeI	TCCRAC	5 cut(s)	88, 1099, 1404, 2007, 2165
MroXI	GAANNNNTTC	1 cut(s)	1394
MslI	CAYNNNNRTG	3 cut(s)	301, 1161, 1997
MspA1I	CMGCKG	1 cut(s)	1052
MspCI	CTTAAG	3 cut(s)	1084, 1501, 2062
MspI	CCGG	1 cut(s)	980
MspR9I	CCNGG	1 cut(s)	498
MunI	CAATTG	2 cut(s)	507, 1934
Mva1269I	GAATGC	1 cut(s)	2073
MvaI	CCWGG	1 cut(s)	498
MvnI	CGCG	1 cut(s)	479
MwoI	GCNNNNNNNGC	2 cut(s)	569, 2249
NdeII	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
NmeAIII	GCCGAG	1 cut(s)	1500
NmuCI	GTSAC	3 cut(s)	54, 263, 778
NsbI	TGCGCA	1 cut(s)	2242
NspI	RCATGY	5 cut(s)	1155, 1289, 2209, 2276, 2311
PaeI	GCATGC	1 cut(s)	2209
PagI	TCATGA	2 cut(s)	592, 1162
PaqCI	CACCTGC	2 cut(s)	869, 1721
PceI	AGGCCT	1 cut(s)	174
PciI	ACATGT	2 cut(s)	1151, 1285
PctI	GAATGC	1 cut(s)	2073
PdmI	GAANNNNTTC	1 cut(s)	1394
PfeI	GAWTC	4 cut(s)	596, 1374, 1489, 1750
PflMI	CCANNNNNTGG	1 cut(s)	1370
PinAI	ACCGGT	1 cut(s)	979
PkrI	GCNGC	1 cut(s)	1696
PleI	GAGTC	3 cut(s)	463, 520, 2040
PmaCI	CACGTG	1 cut(s)	2371
PmlI	CACGTG	1 cut(s)	2371
PpsI	GAGTC	3 cut(s)	463, 520, 2040
Ppu21I	YACGTR	1 cut(s)	2371
PscI	ACATGT	2 cut(s)	1151, 1285
PshAI	GACNNNNGTC	1 cut(s)	2308
PsiI	TTATAA	1 cut(s)	2384
Psp6I	CCWGG	1 cut(s)	496
PspCI	CACGTG	1 cut(s)	2371
PspFI	CCCAGC	1 cut(s)	624
PspGI	CCWGG	1 cut(s)	496
PstI	CTGCAG	2 cut(s)	1882, 2222
PstNI	CAGNNNCTG	2 cut(s)	1736, 2258
PsuI	RGATCY	1 cut(s)	2052
RsaI	GTAC	4 cut(s)	1284, 1480, 1617, 1979
RsaNI	GTAC	4 cut(s)	1283, 1479, 1616, 1978
RseI	CAYNNNNRTG	3 cut(s)	301, 1161, 1997
SalI	GTCGAC	1 cut(s)	1358
SatI	GCNGC	1 cut(s)	1695
Sau3AI	GATC	8 cut(s)	241, 336, 661, 847, 1143, 1165, 1958, 2052
ScaI	AGTACT	2 cut(s)	1480, 1979
SchI	GAGTC	3 cut(s)	463, 520, 2041
ScrFI	CCNGG	1 cut(s)	498
SduI	GDGCHC	1 cut(s)	1872
SfaNI	GCATC	5 cut(s)	429, 673, 702, 1040, 1845
SfcI	CTRYAG	4 cut(s)	1878, 2021, 2218, 2323
SmiMI	CAYNNNNRTG	3 cut(s)	301, 1161, 1997
SmlI	CTYRAG	5 cut(s)	1084, 1501, 2045, 2062, 2285
SmoI	CTYRAG	5 cut(s)	1084, 1501, 2045, 2062, 2285
SphI	GCATGC	1 cut(s)	2209
SseBI	AGGCCT	1 cut(s)	174
SsiI	CCGC	4 cut(s)	204, 758, 1052, 1402
SspI	AATATT	1 cut(s)	1726
SspMI	CTAG	6 cut(s)	608, 701, 767, 771, 1580, 2211
StuI	AGGCCT	1 cut(s)	174
StyD4I	CCNGG	1 cut(s)	496
StyI	CCWWGG	1 cut(s)	307
TaaI	ACNGT	7 cut(s)	633, 751, 784, 802, 1539, 1785, 2025
TaiI	ACGT	4 cut(s)	109, 561, 1221, 2373
TaqI	TCGA	6 cut(s)	270, 655, 1270, 1359, 1855, 2096
TatI	WGTACW	3 cut(s)	1282, 1478, 1977
TfiI	GAWTC	4 cut(s)	596, 1374, 1489, 1750
TseFI	GTSAC	3 cut(s)	54, 263, 778
TseI	GCWGC	1 cut(s)	1694
Tsp45I	GTSAC	3 cut(s)	54, 263, 778
TspDTI	ATGAA	8 cut(s)	264, 404, 581, 609, 1151, 1652, 1910, 2094
TspGWI	ACGGA	3 cut(s)	844, 1471, 1689
Van91I	CCANNNNNTGG	1 cut(s)	1370
Vha464I	CTTAAG	3 cut(s)	1084, 1501, 2062
XagI	CCTNNNNNAGG	1 cut(s)	1881
XapI	RAATTY	9 cut(s)	378, 1225, 1298, 1310, 1394, 1705, 2147, 2318, 2361
XbaI	TCTAGA	1 cut(s)	1579
XceI	RCATGY	5 cut(s)	1155, 1289, 2209, 2276, 2311
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1626
XmiI	GTMKAC	3 cut(s)	733, 1359, 1888
XmnI	GAANNNNTTC	1 cut(s)	1394
XspI	CTAG	6 cut(s)	608, 701, 767, 771, 1580, 2211
ZrmI	AGTACT	2 cut(s)	1480, 1979

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.