Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

36454992 .. 36458331

Gene Structure 3340 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57056

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2841 bp

ATGGCTGAAGGCGTTGTTACAGTTGTGGCTGAAGGGATCAAGCCCCTTGGAGAGTTCATCATTCAGCAAGCGAAATTCTTGGGTGGAGTCAGCAATCAAATTGAGCTTGCGCAGAACGAGCTACACGTGATCCGGGGATTTCTAAAAGATGCAGATACGAGGCAACAAGATGAAGAACGCGTACGCAATTGTGTTGAACTTATCAGAGATGCTGCTTATGACTTGGAGGATGTCATTGAATCTTTTTACTTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACTGAGAAGAGGATTGTTCTCAAAAGGTTTGCCTGCATCTTTAATGAAGGACTTAATCGATACAAGATTGGGTCCGAAATTGAGCATATTATGGCCAAACTTTCTCGTCTGAGGTCGAATTTGGAGACTTATAACATAAGACAAATAAGTGGGGGTGAAAGTGTGGCTTCAGGTTTCAAGAGGCAACCAGATAGGAGGCGAACTTACGCTCATGAAGTTGAAAGTCATATTGTTGGGTTGGAGGAAATTACGGGAACACTGGTGAAAAAGTTGGTGAAAGAAGGAAAGCGTCACCTAGTTATTTCTATTTGGGGGATGGGCGGCTCAGGAAAAACCACTCTTGCAAAACAGGTTTTTCGTCAAAATGAAATTAAGCGTCATTTTGATTGTTTTGCTTGGGTCTCTATATCTCAACAATGGGAAGGAAAGGTTGTATTGGAAGAGATTTTAATCAAACTCACTTCCCCATCAATAGAGAAAAGGAAAGAAATATCCAAAATGAAAATGGATGAAATAGCAGAGGAGGTCTATAGTATCCAACGAGAAGAGAGATGTTTGGTGGTCCTTGATGACATATGGACTCAAGAGGCTTGGAATTCGATAAAAGCTGGATTCCCAATCAATGAGGAAACAGAGAGCCGGATATTACTCACTACTCGCAAGAAAGAAGTCGCCTTGCTTGCATCCAGAAATGATCATCTCCACCAACCTCAGCAACTAGATGACAACCAGTGCTGGGAACTGTTTGAAAAGATAGCCATATGTGGAAGCGACAAAACAGACTTCGAAATTGATGCAGAGAAGAGAAAATTAGGAGAGGAGATGCTTAAACATTGTTCAGGTCTACCATTAGCCATCACTGTGCTCGCTGGTCTTCTTAGTAGACGAGAGACGGTTGATGAATGGAAGACGGTACTTGGAAATGTTAATGTATACATAATGAGAGGCACAAATGTCCCTGAAAGAGAAAAGACAAGTCAGGAGTGTGGTGTTTCAGGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTGAAACTCTGCTTTCTGTATTTAGCCCAATATCCTGAGGATCATGAGATACAGGTAACAAGATTGACTCAATTATGGATTGCAGAAGGGTTTATACCTTCAACATCAGAAATACATGGTTCAATTGAATTAATGGAAGATGTATCATATGGTTGCCTAACTGAACTGGTGCAAAGATCTATGGTTCAAGTTGGAATATATGGTTCTAGTGGGAAGGTGAAACGTTTCCGTCTCCATGATCTTATGCGGGACTTGTGCTTGCAAAAGGCAAAAGAGGAGAACTTTCTCGGTATTGTTAACTCTTCTTTGGGTCTGGGATCTAATGCAGCGCTGATCGGTAAGGTTCGAAGACTTGCCCTCTATTTGGACGAAAATGAGGATGGAAGAGATGGCCACATCAGATCTCTATTATACTTTGGCCTAGGAGAGATCAACCAAAAGTGGAACAAAAGAATAATACGATCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTTCAGTTTGAAAATATATTTAGAGATTTTGACTTGCCAAAGACGATTGGGAATCTAGTCCACCTGAGGTTTCTGAGTCTGAAGAATAGTGAATTTCGTGCCTTGCCATCATCTGTATCTAATCTGGTACTCTTGCAAACTCTAGATCTGCGGGGTATAGGAACTATACGTACCAAAATCAGAAATGTGTTTTGGAATTTGGAGCAACTGAGGCATTTGTATTTACCAGTGTATAGTGACATTGGAAAACTGTCATTTGCAAGGCTGTGCAATTTGCAGACGTTGGTCAATGTTAGAATTGAGGAATGTGATTGGAATGATCTTGTTCAATTAAGCAATCTGAAGAAACTACGCATAAGGGCATCAGAGACTAGTGAGTTGGAAAAGCTGAAGGACATGTTGATATCAAGGAATAGAACATATAAACATCTTCGGTCTCTATCTCTGCAGGTAAACCGACCGTTTGCTGGGGATATTATACCAAGTGATATAGTATTAAGGTGTCCTCATTTATACAAGCTGCAACTGGAGGGGAAAATTACAGCGTTCCCGAAAGAGCTCCCAAACCTCGCCAAGTTAACGCTGTTTGGAACAAGACTGAAGGGTGACCAGATTGAAATACTGGAGACGCTGCCCAACTTAAGGGTGCTTTACCTCGGTTGGCTTTCTTTCGAATCAGAAACAATGGTTTTCTCCCAAGGAGGCTTTCCTCATCTGGAATTTCTTAACCTTGGAACTTTGGAGGATTTGAAGGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCGCATTGAAAGGTGCCGAGAATTGCGGGCAGTTCCAGATGGGCTTCAGGAGATTACAACCCTCAAGGAATTAACAATTGACGGGATGCCCAGTAGATTCTGCAGTAGGGGAAGGAGGAGAGGATTTCTACAAAATCAAACATGTGCCTTCTCTTATAATCACAAATATCGTAACCTGGCTCTAGCTGAAGGAGCCAGCAGGTGCTTCTCAAGTAGTTGCGGGTCCAGCTGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

946

Amino Acids

108.47

Weight (kDa)

8.57

Isoelectric Point (pI)

52.6

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 91	2e-19	Rx N-terminal domain
NB-ARC	PF00931	177 - 347	2e-41	NB-ARC domain
WHD_DRP	PF23559	449 - 524	1.1e-17	Disease resistance protein Winged helix domain
LRR_14	PF23598	593 - 896	1.7e-37	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	411, 2763
AarI	CACCTGC	1 cut(s)	2796
Acc16I	TGCGCA	2 cut(s)	111, 2609
Acc36I	ACCTGC	2 cut(s)	2248, 2796
AccB1I	GGYRCC	1 cut(s)	2619
AccI	GTMKAC	3 cut(s)	1123, 1162, 1212
AccII	CGCG	1 cut(s)	180
AciI	CCGC	5 cut(s)	600, 1561, 1960, 2632, 2826
AclI	AACGTT	1 cut(s)	1537
AclWI	GGATC	4 cut(s)	44, 124, 1362, 1639
AcoI	YGGCCR	2 cut(s)	372, 1705
AcsI	RAATTY	6 cut(s)	74, 397, 874, 1901, 2005, 2528
AcvI	CACGTG	1 cut(s)	127
AfaI	GTAC	5 cut(s)	183, 280, 1194, 1938, 1981
AfeI	AGCGCT	1 cut(s)	1644
AfiI	CCNNNNNNNGG	4 cut(s)	1015, 1678, 2276, 2451
AflII	CTTAAG	1 cut(s)	2449
AflIII	ACRYGT	4 cut(s)	124, 178, 2205, 2747
AhlI	ACTAGT	1 cut(s)	2180
AjnI	CCWGG	2 cut(s)	263, 2781
AjuI	GAANNNNNNNTTGG	4 cut(s)	1984, 2016, 2499, 2531
AluBI	AGCT	8 cut(s)	106, 121, 887, 2197, 2329, 2368, 2792, 2835
AluI	AGCT	8 cut(s)	106, 121, 887, 2197, 2329, 2368, 2792, 2835
Alw21I	GWGCWC	2 cut(s)	1146, 2370
Alw26I	GTCTC	7 cut(s)	398, 685, 1163, 1550, 2171, 2250, 2429
AlwI	GGATC	4 cut(s)	44, 124, 1362, 1639
Aor51HI	AGCGCT	1 cut(s)	1644
AoxI	GGCC	3 cut(s)	372, 1705, 1732
ApeKI	GCWGC	4 cut(s)	212, 1640, 2329, 2440
ApoI	RAATTY	6 cut(s)	74, 397, 874, 1901, 2005, 2528
AseI	ATTAAT	1 cut(s)	1445
Asp700I	GAANNNNTTC	1 cut(s)	1538
AspA2I	CCTAGG	1 cut(s)	1735
AspLEI	GCGC	3 cut(s)	112, 1645, 2610
AspS9I	GGNCC	3 cut(s)	351, 841, 2829
AsuC2I	CCSGG	1 cut(s)	134
AsuHPI	GGTGA	6 cut(s)	446, 553, 563, 565, 1543, 2426
AsuII	TTCGAA	3 cut(s)	1065, 1660, 2481
AvaII	GGWCC	3 cut(s)	351, 841, 2829
AvrII	CCTAGG	1 cut(s)	1735
AxyI	CCTNAGG	2 cut(s)	1350, 1874
BalI	TGGCCA	2 cut(s)	374, 1707
BanI	GGYRCC	1 cut(s)	2619
BanII	GRGCYC	1 cut(s)	2370
BarI	GAAGNNNNNNTAC	4 cut(s)	165, 197, 1392, 1424
BbrPI	CACGTG	1 cut(s)	127
BbsI	GAAGAC	4 cut(s)	1145, 1193, 1669, 2588
Bbv12I	GWGCWC	2 cut(s)	1146, 2370
BbvCI	CCTCAGC	1 cut(s)	990
BbvI	GCAGC	4 cut(s)	199, 1652, 2316, 2427
BccI	CCATC	8 cut(s)	589, 754, 1142, 1315, 1688, 1697, 1924, 2639
BcgI	CGANNNNNNTGC	2 cut(s)	1055, 1089
BciT130I	CCWGG	2 cut(s)	265, 2783
BciVI	GTATCC	1 cut(s)	824
BclI	TGATCA	1 cut(s)	973
BcnI	CCSGG	1 cut(s)	134
BcoDI	GTCTC	7 cut(s)	398, 685, 1163, 1550, 2171, 2250, 2429
BcuI	ACTAGT	1 cut(s)	2180
BfaI	CTAG	9 cut(s)	575, 998, 1521, 1736, 1865, 1952, 2181, 2592, 2789
BfmI	CTRYAG	3 cut(s)	808, 2255, 2707
BfoI	RGCGCY	1 cut(s)	1646
BfrI	CTTAAG	1 cut(s)	2449
BfuAI	ACCTGC	2 cut(s)	2248, 2796
BfuI	GTATCC	1 cut(s)	824
BglII	AGATCT	3 cut(s)	1490, 1715, 1954
BisI	GCNGC	5 cut(s)	213, 601, 1641, 2330, 2441
BlnI	CCTAGG	1 cut(s)	1735
BlsI	GCNGC	5 cut(s)	214, 602, 1642, 2331, 2442
Bme1390I	CCNGG	3 cut(s)	134, 265, 2783
Bme18I	GGWCC	3 cut(s)	351, 841, 2829
BmgT120I	GGNCC	3 cut(s)	351, 841, 2829
BmiI	GGNNCC	4 cut(s)	352, 2621, 2800, 2830
BmrFI	CCNGG	3 cut(s)	134, 265, 2783
BmrI	ACTGGG	1 cut(s)	2691
BmsI	GCATC	8 cut(s)	139, 199, 324, 971, 1063, 1092, 2180, 2682
BmuI	ACTGGG	1 cut(s)	2691
BoxI	GACNNNNGTC	1 cut(s)	2093
BpiI	GAAGAC	4 cut(s)	1145, 1193, 1669, 2588
BpmI	CTGGAG	2 cut(s)	2357, 2453
Bpu10I	CCTNAGC	2 cut(s)	604, 990
Bpu14I	TTCGAA	3 cut(s)	1065, 1660, 2481
BpuEI	CTTGAG	3 cut(s)	846, 2654, 2800
BpuMI	CCSGG	1 cut(s)	134
Bsa29I	ATCGAT	1 cut(s)	337
BsaAI	YACGTR	2 cut(s)	127, 1979
BsaBI	GATNNNNATC	1 cut(s)	728
BsaI	GGTCTC	2 cut(s)	685, 2250
BsaJI	CCNNGG	6 cut(s)	46, 133, 1735, 2464, 2506, 2539
BsaXI	ACNNNNNCTCC	2 cut(s)	262, 292
Bsc4I	CCNNNNNNNGG	4 cut(s)	1015, 1678, 2276, 2451
Bse1I	ACTGG	7 cut(s)	543, 1009, 1485, 2036, 2340, 2436, 2697
Bse21I	CCTNAGG	2 cut(s)	1350, 1874
Bse8I	GATNNNNATC	1 cut(s)	728
BseBI	CCWGG	2 cut(s)	265, 2783
BseCI	ATCGAT	1 cut(s)	337
BseDI	CCNNGG	6 cut(s)	46, 133, 1735, 2464, 2506, 2539
BseGI	GGATG	6 cut(s)	235, 600, 793, 962, 1699, 2697
BseJI	GATNNNNATC	1 cut(s)	728
BseLI	CCNNNNNNNGG	4 cut(s)	1015, 1678, 2276, 2451
BseMII	CTCAG	8 cut(s)	273, 380, 618, 1004, 1341, 1865, 1874, 2009
BseNI	ACTGG	7 cut(s)	543, 1009, 1485, 2036, 2340, 2436, 2697
BseRI	GAGGAG	6 cut(s)	283, 288, 815, 1112, 1604, 2737
BseXI	GCAGC	4 cut(s)	199, 1652, 2316, 2427
BseYI	CCCAGC	2 cut(s)	1014, 2276
Bsh1236I	CGCG	1 cut(s)	180
Bsh1285I	CGRYCG	1 cut(s)	2270
BshFI	GGCC	3 cut(s)	374, 1707, 1734
BshNI	GGYRCC	1 cut(s)	2619
BshVI	ATCGAT	1 cut(s)	337
BsiEI	CGRYCG	1 cut(s)	2270
BsiHKAI	GWGCWC	2 cut(s)	1146, 2370
BsiSI	CCGG	2 cut(s)	133, 919
BsiWI	CGTACG	1 cut(s)	181
BslFI	GGGAC	2 cut(s)	1220, 1577
BslI	CCNNNNNNNGG	4 cut(s)	1015, 1678, 2276, 2451
BsmAI	GTCTC	7 cut(s)	398, 685, 1163, 1550, 2171, 2250, 2429
BsmBI	CGTCTC	3 cut(s)	1163, 1550, 2429
BsmFI	GGGAC	2 cut(s)	1220, 1577
BsnI	GGCC	3 cut(s)	374, 1707, 1734
Bso31I	GGTCTC	2 cut(s)	685, 2250
Bsp119I	TTCGAA	3 cut(s)	1065, 1660, 2481
Bsp1286I	GDGCHC	2 cut(s)	1146, 2370
BspACI	CCGC	5 cut(s)	600, 1561, 1960, 2632, 2826
BspANI	GGCC	3 cut(s)	374, 1707, 1734
BspCNI	CTCAG	8 cut(s)	274, 381, 617, 1003, 1342, 1866, 1875, 2010
BspDI	ATCGAT	1 cut(s)	337
BspFNI	CGCG	1 cut(s)	180
BspHI	TCATGA	2 cut(s)	490, 1357
BspLI	GGNNCC	4 cut(s)	352, 2621, 2800, 2830
BspMAI	CTGCAG	2 cut(s)	2259, 2711
BspMI	ACCTGC	2 cut(s)	2248, 2796
BspPI	GGATC	4 cut(s)	44, 124, 1362, 1639
BspT104I	TTCGAA	3 cut(s)	1065, 1660, 2481
BspT107I	GGYRCC	1 cut(s)	2619
BspTI	CTTAAG	1 cut(s)	2449
BspTNI	GGTCTC	2 cut(s)	685, 2250
BsrI	ACTGG	7 cut(s)	543, 1009, 1485, 2036, 2340, 2436, 2697
BssECI	CCNNGG	6 cut(s)	46, 133, 1735, 2464, 2506, 2539
BssNAI	GTATAC	1 cut(s)	1213
BssT1I	CCWWGG	4 cut(s)	46, 1735, 2506, 2539
Bst1107I	GTATAC	1 cut(s)	1213
Bst2UI	CCWGG	2 cut(s)	265, 2783
Bst4CI	ACNGT	7 cut(s)	22, 1023, 1141, 1174, 1192, 2061, 2271
Bst6I	CTCTTC	6 cut(s)	281, 714, 819, 1076, 1621, 1693
BstAFI	CTTAAG	1 cut(s)	2449
BstBAI	YACGTR	2 cut(s)	127, 1979
BstBI	TTCGAA	3 cut(s)	1065, 1660, 2481
BstC8I	GCNNGC	8 cut(s)	69, 108, 313, 960, 1146, 1574, 2634, 2803
BstEII	GGTNACC	1 cut(s)	2414
BstF5I	GGATG	6 cut(s)	235, 600, 793, 962, 1699, 2697
BstFNI	CGCG	1 cut(s)	180
BstH2I	RGCGCY	1 cut(s)	1646
BstHHI	GCGC	3 cut(s)	112, 1645, 2610
BstMAI	GTCTC	7 cut(s)	398, 685, 1163, 1550, 2171, 2250, 2429
BstMCI	CGRYCG	1 cut(s)	2270
BstMWI	GCNNNNNNNGC	5 cut(s)	118, 959, 2020, 2798, 2832
BstNI	CCWGG	2 cut(s)	265, 2783
BstNSI	RCATGY	2 cut(s)	2209, 2751
BstPAI	GACNNNNGTC	1 cut(s)	2093
BstPI	GGTNACC	1 cut(s)	2414
BstSCI	CCNGG	3 cut(s)	132, 263, 2781
BstSFI	CTRYAG	3 cut(s)	808, 2255, 2707
BstSNI	TACGTA	1 cut(s)	1979
BstUI	CGCG	1 cut(s)	180
BstV1I	GCAGC	4 cut(s)	199, 1652, 2316, 2427
BstV2I	GAAGAC	4 cut(s)	1145, 1193, 1669, 2588
BstX2I	RGATCY	4 cut(s)	1490, 1631, 1715, 1954
BstYI	RGATCY	4 cut(s)	1490, 1631, 1715, 1954
BstZ17I	GTATAC	1 cut(s)	1213
Bsu15I	ATCGAT	1 cut(s)	337
Bsu36I	CCTNAGG	2 cut(s)	1350, 1874
BsuI	GTATCC	1 cut(s)	824
BsuRI	GGCC	3 cut(s)	374, 1707, 1734
BsuTUI	ATCGAT	1 cut(s)	337
BtsCI	GGATG	6 cut(s)	235, 600, 793, 962, 1699, 2697
BtsIMutI	CAGTG	4 cut(s)	536, 1016, 1137, 2043
BveI	ACCTGC	2 cut(s)	2248, 2796
Cac8I	GCNNGC	8 cut(s)	69, 108, 313, 960, 1146, 1574, 2634, 2803
CciI	TCATGA	2 cut(s)	490, 1357
CfoI	GCGC	3 cut(s)	112, 1645, 2610
Cfr13I	GGNCC	3 cut(s)	351, 841, 2829
ClaI	ATCGAT	1 cut(s)	337
CseI	GACGC	3 cut(s)	557, 644, 2446
Csp6I	GTAC	5 cut(s)	182, 279, 1193, 1937, 1980
CviAII	CATG	7 cut(s)	491, 1358, 1430, 1550, 2206, 2587, 2748
CviQI	GTAC	5 cut(s)	182, 279, 1193, 1937, 1980
EaeI	YGGCCR	2 cut(s)	372, 1705
Eam1104I	CTCTTC	6 cut(s)	281, 714, 819, 1076, 1621, 1693
EarI	CTCTTC	6 cut(s)	281, 714, 819, 1076, 1621, 1693
Ecl136II	GAGCTC	1 cut(s)	2368
Eco105I	TACGTA	1 cut(s)	1979
Eco130I	CCWWGG	4 cut(s)	46, 1735, 2506, 2539
Eco24I	GRGCYC	1 cut(s)	2370
Eco31I	GGTCTC	2 cut(s)	685, 2250
Eco32I	GATATC	1 cut(s)	2214
Eco47I	GGWCC	3 cut(s)	351, 841, 2829
Eco47III	AGCGCT	1 cut(s)	1644
Eco53kI	GAGCTC	1 cut(s)	2368
Eco72I	CACGTG	1 cut(s)	127
Eco81I	CCTNAGG	2 cut(s)	1350, 1874
Eco91I	GGTNACC	1 cut(s)	2414
EcoICRI	GAGCTC	1 cut(s)	2368
EcoO65I	GGTNACC	1 cut(s)	2414
EcoRI	GAATTC	1 cut(s)	874
EcoRII	CCWGG	2 cut(s)	263, 2781
EcoRV	GATATC	1 cut(s)	2214
EcoT14I	CCWWGG	4 cut(s)	46, 1735, 2506, 2539
EcoT38I	GRGCYC	1 cut(s)	2370
ErhI	CCWWGG	4 cut(s)	46, 1735, 2506, 2539
Esp3I	CGTCTC	3 cut(s)	1163, 1550, 2429
FaeI	CATG	7 cut(s)	494, 1361, 1433, 1553, 2209, 2590, 2751
FalI	AAGNNNNNCTT	2 cut(s)	430, 462
FaqI	GGGAC	2 cut(s)	1220, 1577
FatI	CATG	7 cut(s)	490, 1357, 1429, 1549, 2205, 2586, 2747
FauI	CCCGC	4 cut(s)	1554, 1953, 2625, 2819
FauNDI	CATATG	3 cut(s)	854, 1040, 1462
FbaI	TGATCA	1 cut(s)	973
FblI	GTMKAC	3 cut(s)	1123, 1162, 1212
Fnu4HI	GCNGC	5 cut(s)	213, 601, 1641, 2330, 2441
FokI	GGATG	6 cut(s)	242, 607, 800, 949, 1706, 2704
FriOI	GRGCYC	1 cut(s)	2370
Fsp4HI	GCNGC	5 cut(s)	213, 601, 1641, 2330, 2441
FspBI	CTAG	9 cut(s)	575, 998, 1521, 1736, 1865, 1952, 2181, 2592, 2789
FspI	TGCGCA	2 cut(s)	111, 2609
GlaI	GCGC	3 cut(s)	111, 1644, 2609
GluI	GCNGC	5 cut(s)	213, 601, 1641, 2330, 2441
GsaI	CCCAGC	2 cut(s)	1018, 2280
GsuI	CTGGAG	2 cut(s)	2357, 2453
HaeII	RGCGCY	1 cut(s)	1646
HaeIII	GGCC	3 cut(s)	374, 1707, 1734
HapII	CCGG	2 cut(s)	133, 919
HgaI	GACGC	3 cut(s)	557, 644, 2446
HhaI	GCGC	3 cut(s)	112, 1645, 2610
Hin1II	CATG	7 cut(s)	494, 1361, 1433, 1553, 2209, 2590, 2751
Hin6I	GCGC	3 cut(s)	110, 1643, 2608
HinP1I	GCGC	3 cut(s)	110, 1643, 2608
HincII	GTYRAC	2 cut(s)	1612, 2388
HindII	GTYRAC	2 cut(s)	1612, 2388
HinfI	GANTC	9 cut(s)	87, 239, 859, 891, 1381, 1861, 1885, 2483, 2703
HpaI	GTTAAC	2 cut(s)	1612, 2388
HpaII	CCGG	2 cut(s)	133, 919
HphI	GGTGA	6 cut(s)	446, 553, 563, 565, 1543, 2426
Hpy166II	GTNNAC	7 cut(s)	1124, 1163, 1213, 1612, 1870, 2263, 2388
Hpy8I	GTNNAC	7 cut(s)	1124, 1163, 1213, 1612, 1870, 2263, 2388
HpyCH4III	ACNGT	7 cut(s)	22, 1023, 1141, 1174, 1192, 2061, 2271
HpyCH4IV	ACGT	4 cut(s)	126, 1537, 1978, 2090
HpyF10VI	GCNNNNNNNGC	5 cut(s)	118, 959, 2020, 2798, 2832
HpySE526I	ACGT	4 cut(s)	126, 1537, 1978, 2090
Hsp92II	CATG	7 cut(s)	494, 1361, 1433, 1553, 2209, 2590, 2751
HspAI	GCGC	3 cut(s)	110, 1643, 2608
Ksp22I	TGATCA	1 cut(s)	973
KspAI	GTTAAC	2 cut(s)	1612, 2388
LmnI	GCTCC	3 cut(s)	2011, 2373, 2798
Lsp1109I	GCAGC	4 cut(s)	199, 1652, 2316, 2427
LweI	GCATC	8 cut(s)	139, 199, 324, 971, 1063, 1092, 2180, 2682
MaeI	CTAG	9 cut(s)	575, 998, 1521, 1736, 1865, 1952, 2181, 2592, 2789
MaeII	ACGT	4 cut(s)	126, 1537, 1978, 2090
MaeIII	GTNAC	6 cut(s)	16, 569, 1369, 2045, 2414, 2777
MfeI	CAATTG	3 cut(s)	187, 1437, 2682
MflI	RGATCY	4 cut(s)	1490, 1631, 1715, 1954
MhlI	GDGCHC	2 cut(s)	1146, 2370
MlsI	TGGCCA	2 cut(s)	374, 1707
MluI	ACGCGT	1 cut(s)	178
MluNI	TGGCCA	2 cut(s)	374, 1707
MlyI	GAGTC	4 cut(s)	96, 853, 1375, 1894
MmeI	TCCRAC	4 cut(s)	498, 841, 1486, 2169
Mox20I	TGGCCA	2 cut(s)	374, 1707
MroXI	GAANNNNTTC	1 cut(s)	1538
MscI	TGGCCA	2 cut(s)	374, 1707
MslI	CAYNNNNRTG	1 cut(s)	1139
Msp20I	TGGCCA	2 cut(s)	374, 1707
MspA1I	CMGCKG	1 cut(s)	2835
MspCI	CTTAAG	1 cut(s)	2449
MspI	CCGG	2 cut(s)	133, 919
MspR9I	CCNGG	3 cut(s)	134, 265, 2783
MunI	CAATTG	3 cut(s)	187, 1437, 2682
MvaI	CCWGG	2 cut(s)	265, 2783
MvnI	CGCG	1 cut(s)	180
MwoI	GCNNNNNNNGC	5 cut(s)	118, 959, 2020, 2798, 2832
NciI	CCSGG	1 cut(s)	134
NdeI	CATATG	3 cut(s)	854, 1040, 1462
NlaIII	CATG	7 cut(s)	494, 1361, 1433, 1553, 2209, 2590, 2751
NlaIV	GGNNCC	4 cut(s)	352, 2621, 2800, 2830
NmeAIII	GCCGAG	1 cut(s)	2648
NmuCI	GTSAC	3 cut(s)	569, 2045, 2414
NsbI	TGCGCA	2 cut(s)	111, 2609
NspI	RCATGY	2 cut(s)	2209, 2751
NspV	TTCGAA	3 cut(s)	1065, 1660, 2481
PagI	TCATGA	2 cut(s)	490, 1357
PaqCI	CACCTGC	1 cut(s)	2796
PciI	ACATGT	2 cut(s)	2205, 2747
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PdmI	GAANNNNTTC	1 cut(s)	1538
PfeI	GAWTC	5 cut(s)	239, 891, 1861, 2483, 2703
Pfl23II	CGTACG	1 cut(s)	181
PfoI	TCCNGGA	1 cut(s)	263
PkrI	GCNGC	5 cut(s)	214, 602, 1642, 2331, 2442
PleI	GAGTC	4 cut(s)	95, 853, 1375, 1893
PmaCI	CACGTG	1 cut(s)	127
PmlI	CACGTG	1 cut(s)	127
PpsI	GAGTC	4 cut(s)	95, 853, 1375, 1893
Ppu21I	YACGTR	2 cut(s)	127, 1979
PscI	ACATGT	2 cut(s)	2205, 2747
PshAI	GACNNNNGTC	1 cut(s)	2093
PshBI	ATTAAT	1 cut(s)	1445
PsiI	TTATAA	2 cut(s)	411, 2763
Psp124BI	GAGCTC	1 cut(s)	2370
Psp1406I	AACGTT	1 cut(s)	1537
Psp6I	CCWGG	2 cut(s)	263, 2781
PspCI	CACGTG	1 cut(s)	127
PspEI	GGTNACC	1 cut(s)	2414
PspFI	CCCAGC	2 cut(s)	1014, 2276
PspGI	CCWGG	2 cut(s)	263, 2781
PspLI	CGTACG	1 cut(s)	181
PspN4I	GGNNCC	4 cut(s)	352, 2621, 2800, 2830
PspPI	GGNCC	3 cut(s)	351, 841, 2829
PsrI	GAACNNNNNNTAC	2 cut(s)	1963, 1995
PstI	CTGCAG	2 cut(s)	2259, 2711
PsuI	RGATCY	4 cut(s)	1490, 1631, 1715, 1954
PvuII	CAGCTG	1 cut(s)	2835
RsaI	GTAC	5 cut(s)	183, 280, 1194, 1938, 1981
RsaNI	GTAC	5 cut(s)	182, 279, 1193, 1937, 1980
RseI	CAYNNNNRTG	1 cut(s)	1139
SacI	GAGCTC	1 cut(s)	2370
SatI	GCNGC	5 cut(s)	213, 601, 1641, 2330, 2441
Sau96I	GGNCC	3 cut(s)	351, 841, 2829
SchI	GAGTC	4 cut(s)	96, 853, 1375, 1894
ScrFI	CCNGG	3 cut(s)	134, 265, 2783
SduI	GDGCHC	2 cut(s)	1146, 2370
SfaNI	GCATC	8 cut(s)	139, 199, 324, 971, 1063, 1092, 2180, 2682
SfcI	CTRYAG	3 cut(s)	808, 2255, 2707
SfuI	TTCGAA	3 cut(s)	1065, 1660, 2481
SinI	GGWCC	3 cut(s)	351, 841, 2829
SmiMI	CAYNNNNRTG	1 cut(s)	1139
SmlI	CTYRAG	4 cut(s)	861, 2449, 2669, 2815
SmoI	CTYRAG	4 cut(s)	861, 2449, 2669, 2815
SnaBI	TACGTA	1 cut(s)	1979
SpeI	ACTAGT	1 cut(s)	2180
SsiI	CCGC	5 cut(s)	600, 1561, 1960, 2632, 2826
SspMI	CTAG	9 cut(s)	575, 998, 1521, 1736, 1865, 1952, 2181, 2592, 2789
SstI	GAGCTC	1 cut(s)	2370
StyD4I	CCNGG	3 cut(s)	132, 263, 2781
StyI	CCWWGG	4 cut(s)	46, 1735, 2506, 2539
TaaI	ACNGT	7 cut(s)	22, 1023, 1141, 1174, 1192, 2061, 2271
TaiI	ACGT	4 cut(s)	129, 1540, 1981, 2093
TaqI	TCGA	6 cut(s)	337, 395, 878, 1065, 1660, 2481
TaqII	GACCGA	1 cut(s)	2232
TauI	GCSGC	1 cut(s)	603
TfiI	GAWTC	5 cut(s)	239, 891, 1861, 2483, 2703
TscAI	CASTG	4 cut(s)	543, 1016, 1144, 2043
TseFI	GTSAC	3 cut(s)	569, 2045, 2414
TseI	GCWGC	4 cut(s)	212, 1640, 2329, 2440
Tsp45I	GTSAC	3 cut(s)	569, 2045, 2414
TspDTI	ATGAA	8 cut(s)	46, 186, 339, 507, 660, 794, 804, 1194
TspGWI	ACGGA	1 cut(s)	1532
TspRI	CASTG	4 cut(s)	543, 1016, 1144, 2043
Vha464I	CTTAAG	1 cut(s)	2449
VpaK11BI	GGWCC	3 cut(s)	351, 841, 2829
VspI	ATTAAT	1 cut(s)	1445
XapI	RAATTY	6 cut(s)	74, 397, 874, 1901, 2005, 2528
XbaI	TCTAGA	1 cut(s)	1951
XceI	RCATGY	2 cut(s)	2209, 2751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	781
XmaJI	CCTAGG	1 cut(s)	1735
XmiI	GTMKAC	3 cut(s)	1123, 1162, 1212
XmnI	GAANNNNTTC	1 cut(s)	1538
XspI	CTAG	9 cut(s)	575, 998, 1521, 1736, 1865, 1952, 2181, 2592, 2789

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.