Rmu_sc0000255.1_g000045

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000255.1
Physical Location & Seq
Reverse (-)
221816 .. 222376
561 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000255.1_g000045.1.cds

Sequence Viewer

Length: 561 bp
atgcttcaacactgtgggggtttaccattggccatcactgtgttcgcaggacttctagccaggaaagatgctgttaatgaatgggaaaaggtgctgaagaatgttcatgtattcataaggacaggcacaagtcatgaagaggaatatacaggtgcattacgggtgttggaattaagttatgaagacttaccgtatcacttaaaaccatgcttcttgtattttggcaatttccctgaagatacaaagataactgtgaaaaggttgactcaactaaggattgcagaaggttttgtatcttcagcaaatcgaagggaaggtatagggaaaataatggaggatgtagcatacaattggttgggggagttggtaaaaaggtgtgtggtccaaattggggagcaaggctcaagtagaaaaattaaatcttgttatctccatgatcttgtgcgagacatgtgcttgttgaaggcggaagaggagaattttcttcaggttgtcagtttacacaacaatgaggaaatgcatcatttttcgtctgccgtggaaaggaaaggaaagtgttag

Protein Analysis

186

Amino Acids

21.27

Weight (kDa)

6.71

Isoelectric Point (pI)

36.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 467
AcoI YGGCCR 1 cut(s) 30
AcsI RAATTY 1 cut(s) 478
AcuI CTGAAG 4 cut(s) 116, 255, 282, 470
AfiI CCNNNNNNNGG 2 cut(s) 391, 543
AflIII ACRYGT 1 cut(s) 450
AgsI TTSAA 2 cut(s) 8, 463
AjnI CCWGG 1 cut(s) 59
Alw26I GTCTC 1 cut(s) 441
AoxI GGCC 1 cut(s) 30
ApoI RAATTY 1 cut(s) 478
AspS9I GGNCC 1 cut(s) 382
AvaII GGWCC 1 cut(s) 382
BalI TGGCCA 1 cut(s) 32
BbsI GAAGAC 1 cut(s) 189
BccI CCATC 1 cut(s) 41
BceAI ACGGC 1 cut(s) 521
BcgI CGANNNNNNTGC 2 cut(s) 435, 469
BciT130I CCWGG 1 cut(s) 61
BcoDI GTCTC 1 cut(s) 441
BfaI CTAG 1 cut(s) 56
Bme1390I CCNGG 1 cut(s) 61
Bme18I GGWCC 1 cut(s) 382
BmgT120I GGNCC 1 cut(s) 382
BmrFI CCNGG 1 cut(s) 61
BmsI GCATC 2 cut(s) 58, 529
BpiI GAAGAC 1 cut(s) 189
BplI GAGNNNNNCTC 2 cut(s) 386, 418
BpuEI CTTGAG 1 cut(s) 388
BsaJI CCNNGG 1 cut(s) 537
Bsc4I CCNNNNNNNGG 2 cut(s) 391, 543
BseBI CCWGG 1 cut(s) 61
BseDI CCNNGG 1 cut(s) 537
BseGI GGATG 1 cut(s) 343
BseLI CCNNNNNNNGG 2 cut(s) 391, 543
BseRI GAGGAG 1 cut(s) 488
BshFI GGCC 1 cut(s) 32
BslI CCNNNNNNNGG 2 cut(s) 391, 543
BsmAI GTCTC 1 cut(s) 441
BsnI GGCC 1 cut(s) 32
Bsp143I GATC 1 cut(s) 436
BspACI CCGC 1 cut(s) 467
BspANI GGCC 1 cut(s) 32
BspHI TCATGA 1 cut(s) 133
BssECI CCNNGG 1 cut(s) 537
BssMI GATC 1 cut(s) 436
Bst2UI CCWGG 1 cut(s) 61
Bst4CI ACNGT 4 cut(s) 14, 40, 192, 253
Bst6I CTCTTC 2 cut(s) 132, 465
BstDEI CTNAG 1 cut(s) 272
BstDSI CCRYGG 1 cut(s) 537
BstF5I GGATG 1 cut(s) 343
BstKTI GATC 1 cut(s) 439
BstMAI GTCTC 1 cut(s) 441
BstMBI GATC 1 cut(s) 436
BstNI CCWGG 1 cut(s) 61
BstNSI RCATGY 1 cut(s) 454
BstSCI CCNGG 1 cut(s) 59
BstV2I GAAGAC 1 cut(s) 189
BsuRI GGCC 1 cut(s) 32
BtgI CCRYGG 1 cut(s) 537
BtsCI GGATG 1 cut(s) 343
BtsIMutI CAGTG 2 cut(s) 10, 36
CciI TCATGA 1 cut(s) 133
Cfr13I GGNCC 1 cut(s) 382
CviAII CATG 5 cut(s) 107, 134, 207, 434, 451
CviJI RGCY 3 cut(s) 32, 59, 402
CviKI_1 RGCY 3 cut(s) 32, 59, 402
DdeI CTNAG 1 cut(s) 272
DpnI GATC 1 cut(s) 438
DpnII GATC 1 cut(s) 436
EaeI YGGCCR 1 cut(s) 30
Eam1104I CTCTTC 2 cut(s) 132, 465
EarI CTCTTC 2 cut(s) 132, 465
EciI GGCGGA 1 cut(s) 482
Eco47I GGWCC 1 cut(s) 382
Eco57I CTGAAG 4 cut(s) 116, 255, 282, 470
EcoRII CCWGG 1 cut(s) 59
EcoT22I ATGCAT 1 cut(s) 522
FaeI CATG 5 cut(s) 110, 137, 210, 437, 454
FatI CATG 5 cut(s) 106, 133, 206, 433, 450
FokI GGATG 1 cut(s) 350
FspBI CTAG 1 cut(s) 56
HaeIII GGCC 1 cut(s) 32
Hin1II CATG 5 cut(s) 110, 137, 210, 437, 454
HincII GTYRAC 1 cut(s) 264
HindII GTYRAC 1 cut(s) 264
HinfI GANTC 1 cut(s) 265
Hpy166II GTNNAC 3 cut(s) 23, 264, 500
Hpy188III TCNNGA 1 cut(s) 134
Hpy8I GTNNAC 3 cut(s) 23, 264, 500
HpyAV CCTTC 4 cut(s) 278, 303, 308, 457
HpyCH4III ACNGT 4 cut(s) 14, 40, 192, 253
HpyCH4V TGCA 3 cut(s) 155, 281, 520
HpyF3I CTNAG 1 cut(s) 272
Hsp92II CATG 5 cut(s) 110, 137, 210, 437, 454
Kzo9I GATC 1 cut(s) 436
LmnI GCTCC 1 cut(s) 394
LpnPI CCDG 7 cut(s) 33, 46, 73, 108, 135, 246, 473
LweI GCATC 2 cut(s) 58, 529
MaeI CTAG 1 cut(s) 56
MalI GATC 1 cut(s) 438
MboI GATC 1 cut(s) 436
MboII GAAGA 7 cut(s) 109, 149, 194, 248, 288, 476, 482
MfeI CAATTG 1 cut(s) 349
MlsI TGGCCA 1 cut(s) 32
MluCI AATT 6 cut(s) 170, 226, 349, 387, 414, 478
MluNI TGGCCA 1 cut(s) 32
MlyI GAGTC 1 cut(s) 259
MmeI TCCRAC 1 cut(s) 147
MnlI CCTC 4 cut(s) 133, 328, 466, 505
Mox20I TGGCCA 1 cut(s) 32
Mph1103I ATGCAT 1 cut(s) 522
MscI TGGCCA 1 cut(s) 32
MseI TTAA 4 cut(s) 75, 173, 200, 417
MslI CAYNNNNRTG 2 cut(s) 38, 507
Msp20I TGGCCA 1 cut(s) 32
MspR9I CCNGG 1 cut(s) 61
MunI CAATTG 1 cut(s) 349
MvaI CCWGG 1 cut(s) 61
NdeII GATC 1 cut(s) 436
NlaIII CATG 5 cut(s) 110, 137, 210, 437, 454
NsiI ATGCAT 1 cut(s) 522
NspI RCATGY 1 cut(s) 454
PagI TCATGA 1 cut(s) 133
PciI ACATGT 1 cut(s) 450
PleI GAGTC 1 cut(s) 259
PpsI GAGTC 1 cut(s) 259
PscI ACATGT 1 cut(s) 450
Psp6I CCWGG 1 cut(s) 59
PspGI CCWGG 1 cut(s) 59
PspPI GGNCC 1 cut(s) 382
RseI CAYNNNNRTG 2 cut(s) 38, 507
SaqAI TTAA 4 cut(s) 75, 173, 200, 417
Sau3AI GATC 1 cut(s) 436
Sau96I GGNCC 1 cut(s) 382
SchI GAGTC 1 cut(s) 259
ScrFI CCNGG 1 cut(s) 61
SetI ASST 7 cut(s) 93, 154, 263, 289, 319, 377, 492
SfaNI GCATC 2 cut(s) 58, 529
SinI GGWCC 1 cut(s) 382
SmiMI CAYNNNNRTG 2 cut(s) 38, 507
SmlI CTYRAG 1 cut(s) 403
SmoI CTYRAG 1 cut(s) 403
Sse9I AATT 6 cut(s) 170, 226, 349, 387, 414, 478
SsiI CCGC 1 cut(s) 467
SspMI CTAG 1 cut(s) 56
StyD4I CCNGG 1 cut(s) 59
TaaI ACNGT 4 cut(s) 14, 40, 192, 253
TaqI TCGA 1 cut(s) 307
TasI AATT 6 cut(s) 170, 226, 349, 387, 414, 478
Tru1I TTAA 4 cut(s) 75, 173, 200, 417
Tru9I TTAA 4 cut(s) 75, 173, 200, 417
TscAI CASTG 2 cut(s) 17, 43
TspDTI ATGAA 5 cut(s) 93, 95, 103, 150, 195
TspRI CASTG 2 cut(s) 17, 43
VpaK11BI GGWCC 1 cut(s) 382
XapI RAATTY 1 cut(s) 478
XceI RCATGY 1 cut(s) 454
XspI CTAG 1 cut(s) 56
Zsp2I ATGCAT 1 cut(s) 522
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.