Rh1CG180900

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Forward (+)
39914094 .. 39918863
4770 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG180900.1

Sequence Viewer

Length: 2016 bp
ATGGCTGAGGCTGTTGTGTCAATTGTTATTGAAGGAATCAAGCCCCTCGGAGACTTGATCGTTCGGGAGGCAAAATTCTTGAGTGGAGTGGGCTATCAAGTTGAGCTTGCACAAGTCGAGCTACACTTGATGAGTGCCTTCCTGAAAGATGCAGATTCAAGAACTGGAGACGATGAAGTGGTACGCATTTGGGTGAAACTCATCAGAGATGTTGCTTATGATTTGGAGGATGTTATTGAATCTTTTGCATTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACCATGAAGATTGCTCTGAAAAGGTTTGCCTGCGTCTTCAATGAAGGAATTGATCGTCACAAGATTGGGTCAGAAATTGAGGATATTATGACTACACTTTCTCATTTGAGAGAAAAGAGATGTCTGGTGATCCTTGATGATATATGGACTCACGAGGCATGGCATTCTTTAAAACCTGGATTTCCGGTCAATGAGGAAACAGAGAGCCGGATATTACTCACCACTCGCAAGAAGGAAGTTGCCTTGCTTGCATCCAGAAATGATTTTCTCCACCAACCTCGACCTCTAGATGAAAAGCAAAGCTGGGAACTGTTTCAGAAAATAGCCATAAGTGGAAGCGACAGTACAATTTGTGCAAAGAAGACAGAATTAGGAAAGAAGATGTTGGTACATTGCTCAGGTCTCCCATTAGCCATCAGAGTGCTCGCTGGTCTTCTTAGTAGACGAGAGACAGATGATGAGTGGGAAACAGTACTTAGAAATGTTAATGACTTGTGCTTGCAAAAGGCAAAAGAGGAGAACTTTCTTGGTATTGTTAACTTTTCTGTTGGTCCGGTATCTAATGCAACACTGATTGGTAAGGTTCGAAGACTTGCCCTCCATTTCGACGAAAATGTTAAATATGAGTTCAGTGGTAAGGATGGAAGAGATGGCCATATCAGGGAGTTTAAGTTACCAAAGACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTGTGAAGGATAGTGCATTTCGTGCCTTGCCATCATCTGTATCTAATCTGGTACTTTTGCAGACTCTAGATCTGCGTGGTTGTGGTTTTGGTTTATCAGATATTTGTTTTTTTTGGGACAGGAAGACCAAAATCAGATATGTGTTTTGGAATATGGAGCAACTGAGGCATTTATATTTACCTTCTGAGCACTCTGTAAGTGGTAAGAAACTGTCATTTGCAAGGCTGCGCAATTTGCAGACGTTGCTCAATGTTTCAATCGAGAAATGTGATTTGAATGATCTTGTTCAGTTAACCAATCTGAAAAAACTAGGCATAATTGCATCACAGCCTAGTCACTGGAAAAAGTTGAAGAATGCGTTGGTATTAAGAAGTATAACATATGAGCATCTTCGGTCGCTAACTTTGAGCGTGTCTCGTGGTTGTGATGATTTACCAAGAGATATTGTATTAAGGTGTCCCCATTTATACAAGCTGCAACTGAACGGGAAAATTACAGCATTACCAGAAGAGCTCCGGGGCTATCCAAATCTCACCAAGATAAAGCTGACAAAAACAGAACTGAAGGGTGACCAGATTGAAATACTGGAGAAGCTGCCCAACCTAAGGGTGCTTTACCTCGGTTTTGATTCTTTGGAATCAGAAACAATGGTTTTCTCCCAAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTACTCAATTGTATCATTTGAGGGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCGCATTGAATGGTGCTGGAGTTTGCGGACAGTTCCAGATGGGCTTCAGGAGGTTACTACCCTCAAGGAATTAACAATTGACCAGATGCTCACTAGATTCTGCAGAAGGGTTGGGGAAGGAGGAGAGGATTTCTACAAAATCAAACATGTGCCTTCTCTTATAATCACAAATATTCTTCCTTTGGACGAGGAGCCAGAAATGGAGGAAGCAGCAGTTGCGTCCCAAGTAGTAGTGGTAGCTAAAGCTAAAGGATGGATATAA

Protein Analysis

671

Amino Acids

76.58

Weight (kDa)

8.54

Isoelectric Point (pI)

45.46

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 91 1.5e-19 Rx N-terminal domain
NB-ARC PF00931 126 - 205 4.1e-17 NB-ARC domain
LRR_14 PF23598 320 - 612 3e-31 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1916
Acc16I TGCGCA 2 cut(s) 1223, 1757
Acc65I GGTACC 1 cut(s) 278
AccB1I GGYRCC 1 cut(s) 278
AccI GTMKAC 1 cut(s) 721
AciI CCGC 1 cut(s) 1780
AclWI GGATC 1 cut(s) 403
AcoI YGGCCR 1 cut(s) 931
AcsI RAATTY 2 cut(s) 74, 1676
AcuI CTGAAG 3 cut(s) 1577, 1730, 1784
AfaI GTAC 6 cut(s) 183, 280, 625, 669, 753, 1047
AfiI CCNNNNNNNGG 2 cut(s) 940, 1599
AflIII ACRYGT 1 cut(s) 1900
AjnI CCWGG 2 cut(s) 263, 454
AjuI GAANNNNNNNTTGG 4 cut(s) 1337, 1369, 1647, 1679
AluBI AGCT 9 cut(s) 106, 121, 582, 1468, 1507, 1540, 1588, 1994, 2000
AluI AGCT 9 cut(s) 106, 121, 582, 1468, 1507, 1540, 1588, 1994, 2000
Alw21I GWGCWC 3 cut(s) 705, 1185, 1509
Alw26I GTCTC 5 cut(s) 45, 162, 686, 722, 1413
AlwI GGATC 1 cut(s) 403
AoxI GGCC 1 cut(s) 931
ApeKI GCWGC 4 cut(s) 1219, 1468, 1588, 1964
ApoI RAATTY 2 cut(s) 74, 1676
Asp700I GAANNNNTTC 1 cut(s) 591
Asp718I GGTACC 1 cut(s) 278
AspLEI GCGC 2 cut(s) 1224, 1758
AspS9I GGNCC 1 cut(s) 830
AsuC2I CCSGG 1 cut(s) 1511
AsuHPI GGTGA 5 cut(s) 205, 418, 490, 1519, 1574
AsuII TTCGAA 1 cut(s) 865
AvaII GGWCC 1 cut(s) 830
AxyI CCTNAGG 1 cut(s) 1598
BalI TGGCCA 1 cut(s) 933
BanI GGYRCC 1 cut(s) 278
BanII GRGCYC 1 cut(s) 1509
BarI GAAGNNNNNNTAC 2 cut(s) 607, 639
BauI CACGAG 2 cut(s) 431, 1410
BbsI GAAGAC 6 cut(s) 307, 647, 704, 874, 1124, 1736
Bbv12I GWGCWC 3 cut(s) 705, 1185, 1509
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 4 cut(s) 1206, 1455, 1575, 1976
BccI CCATC 6 cut(s) 701, 914, 923, 1033, 1787, 2001
BciT130I CCWGG 2 cut(s) 265, 456
BcnI CCSGG 1 cut(s) 1511
BcoDI GTCTC 5 cut(s) 45, 162, 686, 722, 1413
BfaI CTAG 7 cut(s) 566, 974, 1061, 1304, 1326, 1740, 1848
BfmI CTRYAG 1 cut(s) 1855
BglII AGATCT 1 cut(s) 1063
BisI GCNGC 4 cut(s) 1220, 1469, 1589, 1965
BlsI GCNGC 4 cut(s) 1221, 1470, 1590, 1966
BmcAI AGTACT 1 cut(s) 753
Bme1390I CCNGG 3 cut(s) 265, 456, 1511
Bme18I GGWCC 1 cut(s) 830
BmgT120I GGNCC 1 cut(s) 830
BmiI GGNNCC 2 cut(s) 280, 1947
BmrFI CCNGG 3 cut(s) 265, 456, 1511
BmsI GCATC 5 cut(s) 139, 539, 1325, 1390, 1830
BpiI GAAGAC 6 cut(s) 307, 647, 704, 874, 1124, 1736
BplI GAGNNNNNCTC 2 cut(s) 1393, 1425
BpmI CTGGAG 3 cut(s) 186, 1601, 1792
Bpu10I CCTNAGC 2 cut(s) 6, 676
Bpu14I TTCGAA 1 cut(s) 865
BpuEI CTTGAG 3 cut(s) 100, 1003, 1802
BpuMI CCSGG 1 cut(s) 1511
BsaI GGTCTC 1 cut(s) 686
BsaJI CCNNGG 4 cut(s) 46, 1510, 1612, 1654
BsaWI WCCGGW 2 cut(s) 463, 832
BsaXI ACNNNNNCTCC 6 cut(s) 262, 292, 861, 891, 935, 965
Bsc4I CCNNNNNNNGG 2 cut(s) 940, 1599
Bse1I ACTGG 3 cut(s) 169, 1337, 1584
Bse21I CCTNAGG 1 cut(s) 1598
Bse3DI GCAATG 1 cut(s) 670
BseBI CCWGG 2 cut(s) 265, 456
BseDI CCNNGG 4 cut(s) 46, 1510, 1612, 1654
BseGI GGATG 4 cut(s) 235, 530, 925, 2012
BseLI CCNNNNNNNGG 2 cut(s) 940, 1599
BseMI GCAATG 1 cut(s) 670
BseMII CTCAG 4 cut(s) 690, 983, 1148, 1170
BseNI ACTGG 3 cut(s) 169, 1337, 1584
BseRI GAGGAG 5 cut(s) 283, 288, 809, 1890, 1958
BseXI GCAGC 4 cut(s) 1206, 1455, 1575, 1976
BseYI CCCAGC 1 cut(s) 582
Bsh1285I CGRYCG 1 cut(s) 1391
BshFI GGCC 1 cut(s) 933
BshNI GGYRCC 1 cut(s) 278
BsiEI CGRYCG 1 cut(s) 1391
BsiHKAI GWGCWC 3 cut(s) 705, 1185, 1509
BsiSI CCGG 4 cut(s) 464, 487, 833, 1510
BslFI GGGAC 3 cut(s) 1124, 1437, 1960
BslI CCNNNNNNNGG 2 cut(s) 940, 1599
BsmAI GTCTC 5 cut(s) 45, 162, 686, 722, 1413
BsmBI CGTCTC 1 cut(s) 162
BsmFI GGGAC 3 cut(s) 1124, 1437, 1960
BsmI GAATGC 2 cut(s) 442, 1354
BsnI GGCC 1 cut(s) 933
Bso31I GGTCTC 1 cut(s) 686
Bsp119I TTCGAA 1 cut(s) 865
Bsp1286I GDGCHC 3 cut(s) 705, 1185, 1509
Bsp143I GATC 5 cut(s) 57, 331, 408, 1063, 1273
BspACI CCGC 1 cut(s) 1780
BspANI GGCC 1 cut(s) 933
BspCNI CTCAG 4 cut(s) 689, 984, 1149, 1171
BspLI GGNNCC 2 cut(s) 280, 1947
BspMAI CTGCAG 1 cut(s) 1859
BspPI GGATC 1 cut(s) 403
BspQI GCTCTTC 1 cut(s) 1497
BspT104I TTCGAA 1 cut(s) 865
BspT107I GGYRCC 1 cut(s) 278
BspTNI GGTCTC 1 cut(s) 686
BsrDI GCAATG 1 cut(s) 670
BsrI ACTGG 3 cut(s) 169, 1337, 1584
BssECI CCNNGG 4 cut(s) 46, 1510, 1612, 1654
BssMI GATC 5 cut(s) 57, 331, 408, 1063, 1273
BssSI CACGAG 2 cut(s) 431, 1410
BssT1I CCWWGG 1 cut(s) 1654
Bst2BI CACGAG 2 cut(s) 431, 1410
Bst2UI CCWGG 2 cut(s) 265, 456
Bst4CI ACNGT 5 cut(s) 591, 623, 751, 1206, 1786
Bst6I CTCTTC 2 cut(s) 919, 1497
BstAPI GCANNNNNTGC 3 cut(s) 1016, 1237, 1970
BstBI TTCGAA 1 cut(s) 865
BstC8I GCNNGC 5 cut(s) 108, 310, 528, 705, 779
BstDEI CTNAG 8 cut(s) 6, 676, 716, 755, 992, 1157, 1179, 1598
BstEII GGTNACC 1 cut(s) 1562
BstF5I GGATG 4 cut(s) 235, 530, 925, 2012
BstHHI GCGC 2 cut(s) 1224, 1758
BstKTI GATC 5 cut(s) 60, 334, 411, 1066, 1276
BstMAI GTCTC 5 cut(s) 45, 162, 686, 722, 1413
BstMBI GATC 5 cut(s) 57, 331, 408, 1063, 1273
BstMCI CGRYCG 1 cut(s) 1391
BstMWI GCNNNNNNNGC 6 cut(s) 527, 1016, 1159, 1228, 1237, 1970
BstNI CCWGG 2 cut(s) 265, 456
BstNSI RCATGY 1 cut(s) 1904
BstPI GGTNACC 1 cut(s) 1562
BstSCI CCNGG 3 cut(s) 263, 454, 1509
BstSFI CTRYAG 1 cut(s) 1855
BstV1I GCAGC 4 cut(s) 1206, 1455, 1575, 1976
BstV2I GAAGAC 6 cut(s) 307, 647, 704, 874, 1124, 1736
BstX2I RGATCY 1 cut(s) 1063
BstYI RGATCY 1 cut(s) 1063
Bsu36I CCTNAGG 1 cut(s) 1598
BsuRI GGCC 1 cut(s) 933
BtsCI GGATG 4 cut(s) 235, 530, 925, 2012
BtsIMutI CAGTG 3 cut(s) 848, 916, 1330
Cac8I GCNNGC 5 cut(s) 108, 310, 528, 705, 779
CfoI GCGC 2 cut(s) 1224, 1758
Cfr13I GGNCC 1 cut(s) 830
CseI GACGC 2 cut(s) 301, 1962
Csp6I GTAC 6 cut(s) 182, 279, 624, 668, 752, 1046
CviAII CATG 4 cut(s) 283, 438, 1735, 1901
CviQI GTAC 6 cut(s) 182, 279, 624, 668, 752, 1046
DdeI CTNAG 8 cut(s) 6, 676, 716, 755, 992, 1157, 1179, 1598
DpnI GATC 5 cut(s) 59, 333, 410, 1065, 1275
DpnII GATC 5 cut(s) 57, 331, 408, 1063, 1273
DraI TTTAAA 1 cut(s) 450
EaeI YGGCCR 1 cut(s) 931
Eam1104I CTCTTC 2 cut(s) 919, 1497
EarI CTCTTC 2 cut(s) 919, 1497
Ecl136II GAGCTC 1 cut(s) 1507
Eco130I CCWWGG 1 cut(s) 1654
Eco24I GRGCYC 1 cut(s) 1509
Eco31I GGTCTC 1 cut(s) 686
Eco47I GGWCC 1 cut(s) 830
Eco53kI GAGCTC 1 cut(s) 1507
Eco57I CTGAAG 3 cut(s) 1577, 1730, 1784
Eco81I CCTNAGG 1 cut(s) 1598
Eco91I GGTNACC 1 cut(s) 1562
EcoICRI GAGCTC 1 cut(s) 1507
EcoO65I GGTNACC 1 cut(s) 1562
EcoRII CCWGG 2 cut(s) 263, 454
EcoT14I CCWWGG 1 cut(s) 1654
EcoT38I GRGCYC 1 cut(s) 1509
ErhI CCWWGG 1 cut(s) 1654
Esp3I CGTCTC 1 cut(s) 162
FaeI CATG 4 cut(s) 286, 441, 1738, 1904
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 3 cut(s) 1124, 1437, 1960
FatI CATG 4 cut(s) 282, 437, 1734, 1900
FauNDI CATATG 1 cut(s) 1375
FblI GTMKAC 1 cut(s) 721
Fnu4HI GCNGC 4 cut(s) 1220, 1469, 1589, 1965
FokI GGATG 3 cut(s) 242, 517, 932
FriOI GRGCYC 1 cut(s) 1509
Fsp4HI GCNGC 4 cut(s) 1220, 1469, 1589, 1965
FspBI CTAG 7 cut(s) 566, 974, 1061, 1304, 1326, 1740, 1848
FspI TGCGCA 2 cut(s) 1223, 1757
GlaI GCGC 2 cut(s) 1223, 1757
GluI GCNGC 4 cut(s) 1220, 1469, 1589, 1965
GsaI CCCAGC 1 cut(s) 586
GsuI CTGGAG 3 cut(s) 186, 1601, 1792
HaeIII GGCC 1 cut(s) 933
HapII CCGG 4 cut(s) 464, 487, 833, 1510
HgaI GACGC 2 cut(s) 301, 1962
HhaI GCGC 2 cut(s) 1224, 1758
Hin1II CATG 4 cut(s) 286, 441, 1738, 1904
Hin6I GCGC 2 cut(s) 1222, 1756
HinP1I GCGC 2 cut(s) 1222, 1756
HincII GTYRAC 2 cut(s) 817, 1287
HindII GTYRAC 2 cut(s) 817, 1287
HinfI GANTC 9 cut(s) 36, 155, 239, 427, 970, 1057, 1622, 1631, 1851
HpaI GTTAAC 2 cut(s) 817, 1287
HpaII CCGG 4 cut(s) 464, 487, 833, 1510
HphI GGTGA 5 cut(s) 205, 418, 490, 1519, 1574
Hpy166II GTNNAC 4 cut(s) 722, 817, 979, 1287
Hpy8I GTNNAC 4 cut(s) 722, 817, 979, 1287
Hpy99I CGWCG 1 cut(s) 890
HpyCH4III ACNGT 5 cut(s) 591, 623, 751, 1206, 1786
HpyCH4IV ACGT 1 cut(s) 1235
HpyF10VI GCNNNNNNNGC 6 cut(s) 527, 1016, 1159, 1228, 1237, 1970
HpyF3I CTNAG 8 cut(s) 6, 676, 716, 755, 992, 1157, 1179, 1598
HpySE526I ACGT 1 cut(s) 1235
Hsp92II CATG 4 cut(s) 286, 441, 1738, 1904
HspAI GCGC 2 cut(s) 1222, 1756
KpnI GGTACC 1 cut(s) 282
KspAI GTTAAC 2 cut(s) 817, 1287
Kzo9I GATC 5 cut(s) 57, 331, 408, 1063, 1273
LguI GCTCTTC 1 cut(s) 1497
LmnI GCTCC 3 cut(s) 1150, 1512, 1945
Lsp1109I GCAGC 4 cut(s) 1206, 1455, 1575, 1976
LweI GCATC 5 cut(s) 139, 539, 1325, 1390, 1830
MaeI CTAG 7 cut(s) 566, 974, 1061, 1304, 1326, 1740, 1848
MaeII ACGT 1 cut(s) 1235
MaeIII GTNAC 5 cut(s) 335, 951, 1328, 1562, 1807
MalI GATC 5 cut(s) 59, 333, 410, 1065, 1275
MboI GATC 5 cut(s) 57, 331, 408, 1063, 1273
MfeI CAATTG 3 cut(s) 21, 1694, 1830
MflI RGATCY 1 cut(s) 1063
MhlI GDGCHC 3 cut(s) 705, 1185, 1509
MlsI TGGCCA 1 cut(s) 933
MluNI TGGCCA 1 cut(s) 933
MlyI GAGTC 2 cut(s) 421, 1051
Mox20I TGGCCA 1 cut(s) 933
MroXI GAANNNNTTC 1 cut(s) 591
MscI TGGCCA 1 cut(s) 933
MseI TTAA 9 cut(s) 449, 765, 816, 897, 948, 1286, 1361, 1445, 1826
MslI CAYNNNNRTG 2 cut(s) 191, 698
Msp20I TGGCCA 1 cut(s) 933
MspI CCGG 4 cut(s) 464, 487, 833, 1510
MspR9I CCNGG 3 cut(s) 265, 456, 1511
MunI CAATTG 3 cut(s) 21, 1694, 1830
Mva1269I GAATGC 2 cut(s) 442, 1354
MvaI CCWGG 2 cut(s) 265, 456
MwoI GCNNNNNNNGC 6 cut(s) 527, 1016, 1159, 1228, 1237, 1970
NciI CCSGG 1 cut(s) 1511
NdeI CATATG 1 cut(s) 1375
NdeII GATC 5 cut(s) 57, 331, 408, 1063, 1273
NlaIII CATG 4 cut(s) 286, 441, 1738, 1904
NlaIV GGNNCC 2 cut(s) 280, 1947
NmuCI GTSAC 3 cut(s) 335, 1328, 1562
NsbI TGCGCA 2 cut(s) 1223, 1757
NspI RCATGY 1 cut(s) 1904
NspV TTCGAA 1 cut(s) 865
PciI ACATGT 1 cut(s) 1900
PciSI GCTCTTC 1 cut(s) 1497
PctI GAATGC 2 cut(s) 442, 1354
PdmI GAANNNNTTC 1 cut(s) 591
PfeI GAWTC 7 cut(s) 36, 155, 239, 970, 1622, 1631, 1851
PfoI TCCNGGA 1 cut(s) 263
PkrI GCNGC 4 cut(s) 1221, 1470, 1590, 1966
PleI GAGTC 2 cut(s) 421, 1051
PpsI GAGTC 2 cut(s) 421, 1051
PscI ACATGT 1 cut(s) 1900
PsiI TTATAA 1 cut(s) 1916
Psp124BI GAGCTC 1 cut(s) 1509
Psp6I CCWGG 2 cut(s) 263, 454
PspEI GGTNACC 1 cut(s) 1562
PspFI CCCAGC 1 cut(s) 582
PspGI CCWGG 2 cut(s) 263, 454
PspN4I GGNNCC 2 cut(s) 280, 1947
PspPI GGNCC 1 cut(s) 830
PstI CTGCAG 1 cut(s) 1859
PsuI RGATCY 1 cut(s) 1063
RsaI GTAC 6 cut(s) 183, 280, 625, 669, 753, 1047
RsaNI GTAC 6 cut(s) 182, 279, 624, 668, 752, 1046
RseI CAYNNNNRTG 2 cut(s) 191, 698
SacI GAGCTC 1 cut(s) 1509
SapI GCTCTTC 1 cut(s) 1497
SaqAI TTAA 9 cut(s) 449, 765, 816, 897, 948, 1286, 1361, 1445, 1826
SatI GCNGC 4 cut(s) 1220, 1469, 1589, 1965
Sau3AI GATC 5 cut(s) 57, 331, 408, 1063, 1273
Sau96I GGNCC 1 cut(s) 830
ScaI AGTACT 1 cut(s) 753
SchI GAGTC 2 cut(s) 421, 1051
ScrFI CCNGG 3 cut(s) 265, 456, 1511
SduI GDGCHC 3 cut(s) 705, 1185, 1509
SfaNI GCATC 5 cut(s) 139, 539, 1325, 1390, 1830
SfcI CTRYAG 1 cut(s) 1855
SfuI TTCGAA 1 cut(s) 865
SinI GGWCC 1 cut(s) 830
SmiMI CAYNNNNRTG 2 cut(s) 191, 698
SmlI CTYRAG 3 cut(s) 79, 982, 1817
SmoI CTYRAG 3 cut(s) 79, 982, 1817
SsiI CCGC 1 cut(s) 1780
SspI AATATT 1 cut(s) 1927
SspMI CTAG 7 cut(s) 566, 974, 1061, 1304, 1326, 1740, 1848
SstI GAGCTC 1 cut(s) 1509
StyD4I CCNGG 3 cut(s) 263, 454, 1509
StyI CCWWGG 1 cut(s) 1654
TaaI ACNGT 5 cut(s) 591, 623, 751, 1206, 1786
TaiI ACGT 1 cut(s) 1238
TaqI TCGA 5 cut(s) 117, 559, 865, 885, 1254
TaqII GACCGA 1 cut(s) 1377
TatI WGTACW 2 cut(s) 623, 751
TfiI GAWTC 7 cut(s) 36, 155, 239, 970, 1622, 1631, 1851
Tru1I TTAA 9 cut(s) 449, 765, 816, 897, 948, 1286, 1361, 1445, 1826
Tru9I TTAA 9 cut(s) 449, 765, 816, 897, 948, 1286, 1361, 1445, 1826
TscAI CASTG 3 cut(s) 855, 916, 1337
TseFI GTSAC 3 cut(s) 335, 1328, 1562
TseI GCWGC 4 cut(s) 1219, 1468, 1588, 1964
Tsp45I GTSAC 3 cut(s) 335, 1328, 1562
TspDTI ATGAA 4 cut(s) 189, 299, 336, 585
TspRI CASTG 3 cut(s) 855, 916, 1337
VpaK11BI GGWCC 1 cut(s) 830
XapI RAATTY 2 cut(s) 74, 1676
XbaI TCTAGA 2 cut(s) 565, 1060
XceI RCATGY 1 cut(s) 1904
XmiI GTMKAC 1 cut(s) 721
XmnI GAANNNNTTC 1 cut(s) 591
XspI CTAG 7 cut(s) 566, 974, 1061, 1304, 1326, 1740, 1848
ZrmI AGTACT 1 cut(s) 753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.