Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb7

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

8653234 .. 8661686

Gene Structure 8453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_7g08870.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3000 bp

ATGGCTGAGGCTGTTGTTGCAATTGTGGCGGAAGGGCTGAAGCCGCTCGGAGACTTCATCATACAGCAAGCCAACATCTTGAGTGGAGTGAGCAGTCAAGTTGAGCTCGCACGAACTGAACTACAATTCATGTATGGCTTCCTGAAAGATGCAGATGCAAAGCAAGAAGATAATGAAGTGGTACGGATTTGGGTTGCCAACATCCGAGATGCTGCTTATGATTTGGAGGATGTCATCGAAACTTTTGTCTTGAAAGTGGCTTTGAAGAGGAGAGTTGGGAGTAAAAAGATTGTGTTGAAGAGGTATGCTTGCATCTTCAAAGAAGGGTGTTATCTCTACAGGATTGGATCAGACATCGAGCAGATTACGAACAAGATTTCTAAACTGCGGTTGAGTTTGCAGAGTTATAACATAAAGGAAATAAGGGGCAGTGAAGCAGTTGCTAGTCCTACTTCATCACAAGACAGGAGGCTAACTTTTCCCCATGTTATGGAACGCGATGTTGTTGGAATACAAGACAACATAGAAACATTGGCTAAGAATTTGGTAGAAGATGAGAAATGCCATAGGGTGCTTTCCATTTGGGGTATGGGCGGTTCGGGGAAGACCACTCTAGCAAAACATGTTTATCATCACAATGAAGTCAGGCGTCATTTTGATTGTTTTGCTTGGGTGTGTATATCTCAGAGATGCCAAGGAAGAGATGTTTTGGAAGAAATTTTAGTCAAGTTGAAATCTGCTACCAAAGTCCAAAGAGAAGAGATTGAGAAATTGAAGACGGATGAAATAGCAGAGCAACTTTGTACCATGCAACAAGAAAGCAAGTGCTTGGTCGTGGTTGATGACATTTGGACCCTTGAAGCGTGGAATTCCTTAAAAGCTGGATTTCCAATGAAGGAAGAAACACACAGCAGAGTGTTACTCACTACTCGCAACAAAGAAGTAGCTATGCATGCATCTGGAAATAATTTCTTATACCAACCCCAGCCACTAAGCAAAACAGAAAGTTGGGAATTGTTTGAGAAGATAACAATTTCAGGAAGACACAACACAGATCCTGAAACATATGCAAAGAAGGAAGAATTGGGAAAGAAGATGCTTCAACACTGCGCAGGTTTGCCATTAGCCATCACTGTGCTTGCTGGAGTTCTAGCTAGAAAAGTTACTGTTGAGGAGTGGGACTTGGTGCGTGAGAATGTTGATGTATATATAAGGAAGGGGACTGTCCTTGAACGAGGAAACAGAGGCCAAGAATATGAGGGTACAGCATGGGTATTGGCATTGAGTTATGATAACTTGCCATATCGCTTGAAACTATGTTTTTTATATTTATGCCAGTTTCCTGAAGATTATGAGATTCCGGTGAAAAGGTTGACTCAGTTATGGATAGCAGAAGGTCTTATACCCTTGTCATCGACAGAAATGATGGAAGATGAAGCGTATAATTGCCTAAATGAGTTGGTGGAAAGGTGTATGGTTCAAGTCGGAAAACATGGTTCAACTAATAAGATTAAAACTTGTCGCCTCCACGATCTTATACGAGACTTGTGTGTTTTGAAAGCTAAAGAGGAGAACTTTCTATATGTTATCCATTTGTCTCAAGCCATAGCATCCATGGCAGCACCAATTGGTAAAGTTCGAAGGCTTGCCATCTATTTGGACAAAGAAGTAGACCAATTAGCTCCAACAAGAGATGGTCAGCTAAGGTCTCTATTATACTTTGTTGATCCAGAATACTATTTCCAGAATAGGAGTGCAAGATTATTACACCCCATATTGGAGGACTTCAAATTCTTGAGAGTTTTGAAGTTCGAAGATATTGGTGGAGATGTAGAGTTGCCGAGCACAATCGGGAATCTCATACACTTGAGGTTCTTAAGTCTGAAGAATAGTAACATAAAAAGGTTGCCATCATCTGTAGCCAATTTGGTGTTCTTACAGACCCTGGACTTGCGTTGTTTTGACTGGGATTTCTTAAAAATGCAAAATGTGTTTGGGAAGATGGAGCACTTGAGACATTTGTATTTACCTGGCAGACACAGAGTGAGTGAGAGACTGTCATTGGCTAGTCTTCGCAATTTGCAGACGCTAGTTAATATTTCTAGCGAAGATTTTGATTTGAATGATCTAGCTGAACTAACCAGTCTTAGAAAACTAATCATAAGTGCACCAAGGTCGACACCGTTGAAATTTCTGGAGGAAATTTTGGAGTCTGGGAGCATCACATTCAAGCATCTTCTATCTCTATCTGTAGAGGTAGACTCTGGCTCTGGAGTTTTACCAACAAATATAGTACTAAGGTGCCCTAATCTATACAAGCTACGACTGCATGGGCGCATCACAGAGCTACCACAACACATTTGCTGCTATCCAAACCTCACCAAGATGACATTACAGGGAACTGGTCTCAGGGAAGATCAGACAGAGTTACTAGCGAAACTGCCAAACTTGAGAATTCTTTACCTTGGCTTCTACGCTTTCCAATCGGAGACGATTGTGTTCTCGGAAGGAGGCTTTCCTCATCTGGAATTTCTTTCGCTTGATTGGTGGTGGCAGTTGAAGGAGTGGAGGGTGGAGAAAGGATCGATGCCTAGTCTTTGCAGATTGCACATTGAAGATTGCTCCGCATTGAGGGAACTTCCTGATGGTCTTCAATATGTTTCCACCCTCAAGGAAATAACCATCAATTTTATGTACAGAGAATTCTGTACTAGAGTTGGGGAAGGAGGAGAGGACTTCTACAAAATCAAACATGTGCCTTCCCTTATAATCACAAATATTACTTTTACTGAAGAGTCAGAAATGCTGGAATCAACAACGCTAAGGGAAATGGATGGGACAGCAGCAGCGCCATCTTGCCAAATCAGAACCAAGCAAGAAACTGAACTGGAGATGGAATCACTAGCCGTCTCTGAAGTAGTTGATCCGGTCAGAGTTGCTGAGCAACCTACGATGGATAATGCTCCTGGGGAAATAGTTGAAATTCAAGTTGCTTGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

1000

Amino Acids

114.22

Weight (kDa)

5.89

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 94	5.1e-21	Rx N-terminal domain
NB-ARC	PF00931	172 - 346	2.1e-40	NB-ARC domain
WHD_DRP	PF23559	447 - 517	1.7e-19	Disease resistance protein Winged helix domain
LRR_14	PF23598	589 - 901	2.4e-41	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	408, 2768
Acc16I	TGCGCA	1 cut(s)	1111
Acc36I	ACCTGC	1 cut(s)	1103
AccB1I	GGYRCC	1 cut(s)	2301
AccB7I	CCANNNNNTGG	1 cut(s)	490
AccBSI	CCGCTC	1 cut(s)	46
AccI	GTMKAC	3 cut(s)	1671, 2177, 2259
AccII	CGCG	1 cut(s)	498
AciI	CCGC	5 cut(s)	29, 44, 388, 594, 2625
AclWI	GGATC	5 cut(s)	355, 1049, 1721, 2590, 2918
AcuI	CTGAAG	5 cut(s)	59, 1365, 1904, 2811, 2934
AcyI	GRCGYC	1 cut(s)	649
AdeI	CACNNNGTG	1 cut(s)	2044
AfaI	GTAC	6 cut(s)	183, 805, 1264, 2295, 2696, 2710
AfiI	CCNNNNNNNGG	3 cut(s)	490, 1777, 2631
AflII	CTTAAG	1 cut(s)	1876
AflIII	ACRYGT	2 cut(s)	622, 2752
AjnI	CCWGG	3 cut(s)	1944, 2029, 2965
AjuI	GAANNNNNNNTTGG	4 cut(s)	1067, 1099, 1916, 1948
Alw21I	GWGCWC	4 cut(s)	108, 1847, 2010, 2170
Alw26I	GTCTC	9 cut(s)	45, 1536, 1602, 1713, 2008, 2047, 2411, 2483, 2914
Alw44I	GTGCAC	1 cut(s)	2166
AlwI	GGATC	5 cut(s)	355, 1049, 1721, 2590, 2918
AlwNI	CAGNNNCTG	2 cut(s)	1058, 1945
AoxI	GGCC	1 cut(s)	1246
ApaLI	GTGCAC	1 cut(s)	2166
ApeKI	GCWGC	5 cut(s)	212, 1619, 2364, 2843, 2846
ArsI	GACNNNNNNTTYG	2 cut(s)	231, 263
AspLEI	GCGC	3 cut(s)	1112, 2337, 2851
AspS9I	GGNCC	1 cut(s)	852
AsuHPI	GGTGA	2 cut(s)	1375, 2371
AsuII	TTCGAA	2 cut(s)	1639, 1812
AvaII	GGWCC	1 cut(s)	852
BaeGI	GKGCMC	2 cut(s)	2170, 2306
BanI	GGYRCC	1 cut(s)	2301
BanII	GRGCYC	1 cut(s)	108
BarI	GAAGNNNNNNTAC	2 cut(s)	1386, 1418
BbsI	GAAGAC	5 cut(s)	611, 782, 1048, 2063, 2642
Bbv12I	GWGCWC	4 cut(s)	108, 1847, 2010, 2170
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	5 cut(s)	199, 1631, 2351, 2855, 2858
BceAI	ACGGC	1 cut(s)	2891
BcgI	CGANNNNNNTGC	2 cut(s)	2157, 2191
BciT130I	CCWGG	3 cut(s)	1946, 2031, 2967
BcoDI	GTCTC	9 cut(s)	45, 1536, 1602, 1713, 2008, 2047, 2411, 2483, 2914
BfmI	CTRYAG	3 cut(s)	337, 1917, 2250
BfoI	RGCGCY	1 cut(s)	2852
BfrI	CTTAAG	1 cut(s)	1876
BfuAI	ACCTGC	1 cut(s)	1103
BisI	GCNGC	6 cut(s)	44, 213, 1620, 2365, 2844, 2847
BlpI	GCTNAGC	1 cut(s)	2940
BlsI	GCNGC	6 cut(s)	45, 214, 1621, 2366, 2845, 2848
BmcAI	AGTACT	1 cut(s)	2295
Bme1390I	CCNGG	3 cut(s)	1946, 2031, 2967
Bme18I	GGWCC	1 cut(s)	852
BmgT120I	GGNCC	1 cut(s)	852
BmiI	GGNNCC	2 cut(s)	854, 2303
BmrFI	CCNGG	3 cut(s)	1946, 2031, 2967
BmrI	ACTGGG	1 cut(s)	1975
BmuI	ACTGGG	1 cut(s)	1975
BpiI	GAAGAC	5 cut(s)	611, 782, 1048, 2063, 2642
BplI	GAGNNNNNCTC	4 cut(s)	906, 938, 2246, 2278
BpmI	CTGGAG	4 cut(s)	1164, 2216, 2292, 2909
Bpu10I	CCTNAGC	3 cut(s)	6, 1703, 2822
Bpu1102I	GCTNAGC	1 cut(s)	2940
Bpu14I	TTCGAA	2 cut(s)	1639, 1812
BpuEI	CTTGAG	7 cut(s)	100, 1584, 1816, 1888, 2032, 2470, 2654
Bsa29I	ATCGAT	1 cut(s)	2585
BsaHI	GRCGYC	1 cut(s)	649
BsaI	GGTCTC	2 cut(s)	1713, 2411
BsaJI	CCNNGG	6 cut(s)	694, 1614, 1944, 2171, 2464, 2966
BsaWI	WCCGGW	2 cut(s)	1360, 2926
Bsc4I	CCNNNNNNNGG	3 cut(s)	490, 1777, 2631
Bse1I	ACTGG	5 cut(s)	1336, 1970, 2142, 2407, 2892
BseBI	CCWGG	3 cut(s)	1946, 2031, 2967
BseCI	ATCGAT	1 cut(s)	2585
BseDI	CCNNGG	6 cut(s)	694, 1614, 1944, 2171, 2464, 2966
BseGI	GGATG	5 cut(s)	201, 235, 787, 1610, 2839
BseLI	CCNNNNNNNGG	3 cut(s)	490, 1777, 2631
BseMII	CTCAG	4 cut(s)	698, 1391, 2422, 2931
BseNI	ACTGG	5 cut(s)	1336, 1970, 2142, 2407, 2892
BseRI	GAGGAG	4 cut(s)	283, 1187, 1583, 2742
BseSI	GKGCMC	2 cut(s)	2170, 2306
BseXI	GCAGC	5 cut(s)	199, 1631, 2351, 2855, 2858
BseYI	CCCAGC	1 cut(s)	984
Bsh1236I	CGCG	1 cut(s)	498
BshFI	GGCC	1 cut(s)	1248
BshNI	GGYRCC	1 cut(s)	2301
BshVI	ATCGAT	1 cut(s)	2585
BsiHKAI	GWGCWC	4 cut(s)	108, 1847, 2010, 2170
BsiSI	CCGG	2 cut(s)	1361, 2927
BslFI	GGGAC	3 cut(s)	1193, 1234, 2851
BslI	CCNNNNNNNGG	3 cut(s)	490, 1777, 2631
BsmAI	GTCTC	9 cut(s)	45, 1536, 1602, 1713, 2008, 2047, 2411, 2483, 2914
BsmBI	CGTCTC	2 cut(s)	2483, 2914
BsmFI	GGGAC	3 cut(s)	1193, 1234, 2851
BsnI	GGCC	1 cut(s)	1248
Bso31I	GGTCTC	2 cut(s)	1713, 2411
Bsp119I	TTCGAA	2 cut(s)	1639, 1812
Bsp1286I	GDGCHC	5 cut(s)	108, 1847, 2010, 2170, 2306
Bsp1407I	TGTACA	1 cut(s)	2694
Bsp143I	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
Bsp1720I	GCTNAGC	1 cut(s)	2940
Bsp19I	CCATGG	1 cut(s)	1614
BspACI	CCGC	5 cut(s)	29, 44, 388, 594, 2625
BspANI	GGCC	1 cut(s)	1248
BspCNI	CTCAG	4 cut(s)	697, 1390, 2421, 2932
BspDI	ATCGAT	1 cut(s)	2585
BspFNI	CGCG	1 cut(s)	498
BspLI	GGNNCC	2 cut(s)	854, 2303
BspMI	ACCTGC	1 cut(s)	1103
BspPI	GGATC	5 cut(s)	355, 1049, 1721, 2590, 2918
BspT104I	TTCGAA	2 cut(s)	1639, 1812
BspT107I	GGYRCC	1 cut(s)	2301
BspTI	CTTAAG	1 cut(s)	1876
BspTNI	GGTCTC	2 cut(s)	1713, 2411
BsrBI	CCGCTC	1 cut(s)	46
BsrGI	TGTACA	1 cut(s)	2694
BsrI	ACTGG	5 cut(s)	1336, 1970, 2142, 2407, 2892
BssECI	CCNNGG	6 cut(s)	694, 1614, 1944, 2171, 2464, 2966
BssMI	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
BssNI	GRCGYC	1 cut(s)	649
BssT1I	CCWWGG	4 cut(s)	694, 1614, 2171, 2464
Bst2UI	CCWGG	3 cut(s)	1946, 2031, 2967
Bst4CI	ACNGT	5 cut(s)	1135, 1168, 1225, 2058, 2184
Bst6I	CTCTTC	5 cut(s)	260, 293, 694, 753, 2787
BstACI	GRCGYC	1 cut(s)	649
BstAFI	CTTAAG	1 cut(s)	1876
BstAUI	TGTACA	1 cut(s)	2694
BstBI	TTCGAA	2 cut(s)	1639, 1812
BstC8I	GCNNGC	6 cut(s)	69, 108, 310, 954, 1140, 1647
BstDSI	CCRYGG	1 cut(s)	1614
BstF5I	GGATG	5 cut(s)	201, 235, 787, 1610, 2839
BstFNI	CGCG	1 cut(s)	498
BstH2I	RGCGCY	1 cut(s)	2852
BstHHI	GCGC	3 cut(s)	1112, 2337, 2851
BstKTI	GATC	8 cut(s)	350, 1057, 1534, 1729, 2128, 2419, 2585, 2926
BstMAI	GTCTC	9 cut(s)	45, 1536, 1602, 1713, 2008, 2047, 2411, 2483, 2914
BstMBI	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
BstMWI	GCNNNNNNNGC	6 cut(s)	17, 26, 43, 953, 1616, 2326
BstNI	CCWGG	3 cut(s)	1946, 2031, 2967
BstNSI	RCATGY	3 cut(s)	626, 956, 2756
BstSCI	CCNGG	3 cut(s)	1944, 2029, 2965
BstSFI	CTRYAG	3 cut(s)	337, 1917, 2250
BstSLI	GKGCMC	2 cut(s)	2170, 2306
BstUI	CGCG	1 cut(s)	498
BstV1I	GCAGC	5 cut(s)	199, 1631, 2351, 2855, 2858
BstV2I	GAAGAC	5 cut(s)	611, 782, 1048, 2063, 2642
BstX2I	RGATCY	1 cut(s)	1054
BstXI	CCANNNNNNTGG	1 cut(s)	1657
BstYI	RGATCY	1 cut(s)	1054
Bsu15I	ATCGAT	1 cut(s)	2585
BsuRI	GGCC	1 cut(s)	1248
BsuTUI	ATCGAT	1 cut(s)	2585
BtgI	CCRYGG	1 cut(s)	1614
BtgZI	GCGATG	1 cut(s)	513
BtsCI	GGATG	5 cut(s)	201, 235, 787, 1610, 2839
BtsI	GCAGTG	2 cut(s)	436, 1105
BtsIMutI	CAGTG	3 cut(s)	436, 1105, 1131
BveI	ACCTGC	1 cut(s)	1103
Cac8I	GCNNGC	6 cut(s)	69, 108, 310, 954, 1140, 1647
CaiI	CAGNNNCTG	2 cut(s)	1058, 1945
CfoI	GCGC	3 cut(s)	1112, 2337, 2851
Cfr13I	GGNCC	1 cut(s)	852
ClaI	ATCGAT	1 cut(s)	2585
CseI	GACGC	2 cut(s)	638, 2095
Csp6I	GTAC	6 cut(s)	182, 804, 1263, 2294, 2695, 2709
CviQI	GTAC	6 cut(s)	182, 804, 1263, 2294, 2695, 2709
DpnI	GATC	8 cut(s)	349, 1056, 1533, 1728, 2127, 2418, 2584, 2925
DpnII	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
DraIII	CACNNNGTG	1 cut(s)	2044
Eam1104I	CTCTTC	5 cut(s)	260, 293, 694, 753, 2787
EarI	CTCTTC	5 cut(s)	260, 293, 694, 753, 2787
EciI	GGCGGA	1 cut(s)	44
Ecl136II	GAGCTC	1 cut(s)	106
Eco130I	CCWWGG	4 cut(s)	694, 1614, 2171, 2464
Eco24I	GRGCYC	1 cut(s)	108
Eco31I	GGTCTC	2 cut(s)	1713, 2411
Eco47I	GGWCC	1 cut(s)	852
Eco53kI	GAGCTC	1 cut(s)	106
Eco57I	CTGAAG	5 cut(s)	59, 1365, 1904, 2811, 2934
EcoICRI	GAGCTC	1 cut(s)	106
EcoRI	GAATTC	3 cut(s)	868, 2454, 2702
EcoRII	CCWGG	3 cut(s)	1944, 2029, 2965
EcoT14I	CCWWGG	4 cut(s)	694, 1614, 2171, 2464
EcoT22I	ATGCAT	2 cut(s)	954, 958
EcoT38I	GRGCYC	1 cut(s)	108
ErhI	CCWWGG	4 cut(s)	694, 1614, 2171, 2464
Esp3I	CGTCTC	2 cut(s)	2483, 2914
FaqI	GGGAC	3 cut(s)	1193, 1234, 2851
FauNDI	CATATG	1 cut(s)	1066
FblI	GTMKAC	3 cut(s)	1671, 2177, 2259
Fnu4HI	GCNGC	6 cut(s)	44, 213, 1620, 2365, 2844, 2847
FokI	GGATG	5 cut(s)	188, 242, 794, 1597, 2846
FriOI	GRGCYC	1 cut(s)	108
Fsp4HI	GCNGC	6 cut(s)	44, 213, 1620, 2365, 2844, 2847
FspI	TGCGCA	1 cut(s)	1111
GlaI	GCGC	3 cut(s)	1111, 2336, 2850
GluI	GCNGC	6 cut(s)	44, 213, 1620, 2365, 2844, 2847
GsaI	CCCAGC	1 cut(s)	988
GsuI	CTGGAG	4 cut(s)	1164, 2216, 2292, 2909
HaeII	RGCGCY	1 cut(s)	2852
HaeIII	GGCC	1 cut(s)	1248
HapII	CCGG	2 cut(s)	1361, 2927
HgaI	GACGC	2 cut(s)	638, 2095
HhaI	GCGC	3 cut(s)	1112, 2337, 2851
Hin1I	GRCGYC	1 cut(s)	649
Hin6I	GCGC	3 cut(s)	1110, 2335, 2849
HinP1I	GCGC	3 cut(s)	1110, 2335, 2849
HincII	GTYRAC	2 cut(s)	1374, 2178
HindII	GTYRAC	2 cut(s)	1374, 2178
HinfI	GANTC	8 cut(s)	1357, 1375, 1855, 2210, 2261, 2795, 2810, 2897
HpaII	CCGG	2 cut(s)	1361, 2927
HphI	GGTGA	2 cut(s)	1375, 2371
Hpy166II	GTNNAC	5 cut(s)	1374, 1672, 2168, 2178, 2260
Hpy8I	GTNNAC	5 cut(s)	1374, 1672, 2168, 2178, 2260
HpyCH4III	ACNGT	5 cut(s)	1135, 1168, 1225, 2058, 2184
HpyF10VI	GCNNNNNNNGC	6 cut(s)	17, 26, 43, 953, 1616, 2326
Hsp92I	GRCGYC	1 cut(s)	649
HspAI	GCGC	3 cut(s)	1110, 2335, 2849
Kzo9I	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
LmnI	GCTCC	5 cut(s)	1687, 2005, 2217, 2627, 2968
Lsp1109I	GCAGC	5 cut(s)	199, 1631, 2351, 2855, 2858
MaeIII	GTNAC	4 cut(s)	918, 1162, 1892, 2427
MalI	GATC	8 cut(s)	349, 1056, 1533, 1728, 2127, 2418, 2584, 2925
MbiI	CCGCTC	1 cut(s)	46
MboI	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
MfeI	CAATTG	2 cut(s)	21, 1626
MflI	RGATCY	1 cut(s)	1054
MhlI	GDGCHC	5 cut(s)	108, 1847, 2010, 2170, 2306
MlyI	GAGTC	4 cut(s)	1369, 2219, 2255, 2804
MmeI	TCCRAC	3 cut(s)	487, 1465, 1709
Mph1103I	ATGCAT	2 cut(s)	954, 958
MseI	TTAA	5 cut(s)	875, 1512, 1877, 1976, 2094
MslI	CAYNNNNRTG	3 cut(s)	636, 1133, 2384
MspCI	CTTAAG	1 cut(s)	1876
MspI	CCGG	2 cut(s)	1361, 2927
MspR9I	CCNGG	3 cut(s)	1946, 2031, 2967
MunI	CAATTG	2 cut(s)	21, 1626
MvaI	CCWGG	3 cut(s)	1946, 2031, 2967
MvnI	CGCG	1 cut(s)	498
MwoI	GCNNNNNNNGC	6 cut(s)	17, 26, 43, 953, 1616, 2326
NcoI	CCATGG	1 cut(s)	1614
NdeI	CATATG	1 cut(s)	1066
NdeII	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
NlaIV	GGNNCC	2 cut(s)	854, 2303
NmeAIII	GCCGAG	1 cut(s)	1866
NsbI	TGCGCA	1 cut(s)	1111
NsiI	ATGCAT	2 cut(s)	954, 958
NspI	RCATGY	3 cut(s)	626, 956, 2756
NspV	TTCGAA	2 cut(s)	1639, 1812
PaeI	GCATGC	1 cut(s)	956
PciI	ACATGT	2 cut(s)	622, 2752
PfeI	GAWTC	4 cut(s)	1357, 1855, 2810, 2897
PflMI	CCANNNNNTGG	1 cut(s)	490
PkrI	GCNGC	6 cut(s)	45, 214, 1621, 2366, 2845, 2848
PleI	GAGTC	4 cut(s)	1369, 2218, 2255, 2803
PpsI	GAGTC	4 cut(s)	1369, 2218, 2255, 2803
PscI	ACATGT	2 cut(s)	622, 2752
PsiI	TTATAA	2 cut(s)	408, 2768
Psp124BI	GAGCTC	1 cut(s)	108
Psp6I	CCWGG	3 cut(s)	1944, 2029, 2965
PspFI	CCCAGC	1 cut(s)	984
PspGI	CCWGG	3 cut(s)	1944, 2029, 2965
PspN4I	GGNNCC	2 cut(s)	854, 2303
PspPI	GGNCC	1 cut(s)	852
PsrI	GAACNNNNNNTAC	2 cut(s)	580, 612
PstNI	CAGNNNCTG	2 cut(s)	1058, 1945
PsuI	RGATCY	1 cut(s)	1054
RsaI	GTAC	6 cut(s)	183, 805, 1264, 2295, 2696, 2710
RsaNI	GTAC	6 cut(s)	182, 804, 1263, 2294, 2695, 2709
RseI	CAYNNNNRTG	3 cut(s)	636, 1133, 2384
SacI	GAGCTC	1 cut(s)	108
SalI	GTCGAC	1 cut(s)	2176
SaqAI	TTAA	5 cut(s)	875, 1512, 1877, 1976, 2094
SatI	GCNGC	6 cut(s)	44, 213, 1620, 2365, 2844, 2847
Sau3AI	GATC	8 cut(s)	347, 1054, 1531, 1726, 2125, 2416, 2582, 2923
Sau96I	GGNCC	1 cut(s)	852
ScaI	AGTACT	1 cut(s)	2295
SchI	GAGTC	4 cut(s)	1369, 2219, 2255, 2804
ScrFI	CCNGG	3 cut(s)	1946, 2031, 2967
SduI	GDGCHC	5 cut(s)	108, 1847, 2010, 2170, 2306
SfcI	CTRYAG	3 cut(s)	337, 1917, 2250
SfuI	TTCGAA	2 cut(s)	1639, 1812
SinI	GGWCC	1 cut(s)	852
SmiMI	CAYNNNNRTG	3 cut(s)	636, 1133, 2384
SmlI	CTYRAG	8 cut(s)	79, 1599, 1795, 1867, 1876, 2011, 2449, 2669
SmoI	CTYRAG	8 cut(s)	79, 1599, 1795, 1867, 1876, 2011, 2449, 2669
SphI	GCATGC	1 cut(s)	956
SsiI	CCGC	5 cut(s)	29, 44, 388, 594, 2625
SspI	AATATT	2 cut(s)	2098, 2779
SstI	GAGCTC	1 cut(s)	108
StyD4I	CCNGG	3 cut(s)	1944, 2029, 2965
StyI	CCWWGG	4 cut(s)	694, 1614, 2171, 2464
TaaI	ACNGT	5 cut(s)	1135, 1168, 1225, 2058, 2184
TaqI	TCGA	7 cut(s)	237, 357, 1415, 1639, 1812, 2177, 2585
TatI	WGTACW	3 cut(s)	2293, 2694, 2708
TauI	GCSGC	1 cut(s)	46
TfiI	GAWTC	4 cut(s)	1357, 1855, 2810, 2897
Tru1I	TTAA	5 cut(s)	875, 1512, 1877, 1976, 2094
Tru9I	TTAA	5 cut(s)	875, 1512, 1877, 1976, 2094
TscAI	CASTG	3 cut(s)	436, 1112, 1138
TseI	GCWGC	5 cut(s)	212, 1619, 2364, 2843, 2846
TspDTI	ATGAA	8 cut(s)	46, 118, 189, 444, 654, 798, 908, 1449
TspGWI	ACGGA	2 cut(s)	199, 794
TspRI	CASTG	3 cut(s)	436, 1112, 1138
Van91I	CCANNNNNTGG	1 cut(s)	490
Vha464I	CTTAAG	1 cut(s)	1876
VneI	GTGCAC	1 cut(s)	2166
VpaK11BI	GGWCC	1 cut(s)	852
XceI	RCATGY	3 cut(s)	626, 956, 2756
XcmI	CCANNNNNNNNNTGG	2 cut(s)	586, 1612
XmiI	GTMKAC	3 cut(s)	1671, 2177, 2259
ZrmI	AGTACT	1 cut(s)	2295
Zsp2I	ATGCAT	2 cut(s)	954, 958

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.