Rh4AG145900

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
36919873 .. 36923342
3470 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG145900.1

Sequence Viewer

Length: 2112 bp
ATGGCTGAGGCTGTTGTTTCCATTGTGGTGGGAACGCTCGCGGACTTTATCATTCAGGAAGCGAAGCACTTCTGTAGAGTTAGGGATCAGGTTGAGCTTGCACAAACAGAGCTTCAAATGATGCAAGGCTTCTTGAAAGATGCAGATAAAAGGCAACAAGACGATGAAACAGTGCGCATTTGGGTTGCCAAAGTTAGGGATGCTGCTTATGATATGGAGGAGGCTATCGAAATTTTTTCCTTTAAAGTCTCTTCCAAGACGAGAAGGCTTGCTTGTATCTTGATTAAAGGAAAGGGAGTTCACAAGATCGTTGCAGAAATTGAGAAAATCACAACCAGAATCTCTAGCTTGAGGCTGAGTTTGCAGACTTACAACATCAGAGAAATAAGGGAGGGTAGAGATGGTGCAACCTCTTCGTATCAGAGGCAGCAACAACTGAGGCGAACTTACTCTCACATTATTGAACGTGATGTTGTTGGATTACAAGACAACATAAAGGAATTGGTTACGCATCTGGTGAACGATGAGAATTGCCACAAAGTTGTTTCTATCTGGGGCATGGGTGGTTTGGGAAAGACCACTCTTGCAAAGCAAATTTATTATCAGAGTGAAGTTAGGCGCCATTTTAGTTGTTTTGCTTGGGTGTGTATATCTCACAGATTCCAAGTAAGGGAAGTCTGGGAAGGAATTTTGATTAAACTCATTTCTGCTACCAATGAGCAACGAGAAGAAATTGGGAGAATGAGGGAGGATGAAATTGCCAAAAAGCTTTATCTTATTCTACAAGAAAGGACATGTTTGGTGGTTCTTGATGACATCTGGAGTATAGAGACATGGGACTCTTTGAAAGCTGGATTTCCACATGAGAAAACTATGAGCAAAATATTACTCACTACGCGCAACAAAGCAGTAGCTCTGCACGCAGATAGAAAAGGGTTTCTTCACCAACCTCGGCCACTAAATGACTCTGAAAGTTGGCAATTGTTTGAGATCATAGCTATTTTTGGAAGGGAGGAAACAAATCCTGAAATCCACTCAAAGATGAAAGAGTTGGGAAAGAAGATGCTTCTGCATTGTGCAGGTTTGCCGTTAGCCATCAGTGCACTTGCCGGACTTCTAGCTAGAAAGGACACAATTGATGAGTGGAATGCAGTGCATAAGAATGTTTTTGCATACATAAGAAGAGGAAAAGGCCATGAACAAGAATATGCAGAAGTAGAGTTGCCAAGTGACATTGGGAATATGGTTCATCTCAGGTTCCTGAGCCTAAGGCGTTGTCATATAAAACGGTTGCCTTTGTCCATAGGGAATTTGAAGAGCATGCAAACTCTAGATCTTAGATTTCGTCAACTAGATATTGTTCCAAATGTGCTATGGAAGATGGAACAACTGAGACACTTGTATTTACCCCTGTACTACCGTGCAAGTGGTAAACTGCGGCTTGATACTCTTCACTATTTGCAGACCTTACTGCATGTTGACAATTCTCACTTGAATGATATTACTGAACTAACCAATCTTAAAAAATTGGCTGTGCAAGTGTCGAGCCCCTTGAAGAATCTGGAGAAGGTATTAGCATCTACAAGCAGCACACTTGAGCGCATCAGGTCTCTATACGTGCACAACGTAGTTGGAATTCATAGTTGTGCAGAGGTTTCACAAATAGTTTCAAAATGTCACAACATATACAAGCTTGATTTGAATGGTCCAACTGTAGAGTTACCAAAAGATCTTCAGTGCTATCCAAATCTCACCAAGTTATGGTTGTGTCGTTGCTTTCTAAAGGAGAATCAAATGTCAGTACTAGAGAAGCTGCCAAACTTAAGAAATCTTTATCTCCAATCCGGTACATTTGAGGACAATGTCAAGACACTAGTATGCTCCAAAGGAGGCTTTCTTCGTCTTGAATTCCTCTCCCTGAGCTACATGGACGAAATAGATGGGTGGACTGTGGAGGAAGGAGCCATGCCTAGTCTCTGCCAATTGCACATTTCGCGGTGTAGAGGATTGACCACATTTCCAGATGGCTTGAGGAAGGAGGAGAGGATTTCTATAAAATCCAACATGTGCCTTCGCTTGTATTTGGAGAGGCGTGCGACTAGGATCAAGTAG

Protein Analysis

703

Amino Acids

81.22

Weight (kDa)

9.02

Isoelectric Point (pI)

51.5

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 1.3e-24 Rx N-terminal domain
NB-ARC PF00931 162 - 333 2.9e-41 NB-ARC domain
LRR_14 PF23598 410 - 665 7.9e-34 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 176
Acc36I ACCTGC 1 cut(s) 1070
AccB1I GGYRCC 1 cut(s) 618
AccB7I CCANNNNNTGG 1 cut(s) 1761
AccII CGCG 3 cut(s) 41, 898, 1996
AciI CCGC 3 cut(s) 41, 1438, 1996
AclWI GGATC 2 cut(s) 93, 2111
AcoI YGGCCR 1 cut(s) 953
AcsI RAATTY 6 cut(s) 231, 594, 687, 1309, 1635, 1907
AcuI CTGAAG 1 cut(s) 1718
AcyI GRCGYC 1 cut(s) 619
AfaI GTAC 3 cut(s) 1415, 1803, 1849
AfiI CCNNNNNNNGG 3 cut(s) 195, 670, 1761
AflII CTTAAG 1 cut(s) 1822
AflIII ACRYGT 2 cut(s) 794, 2064
AhlI ACTAGT 1 cut(s) 1873
AloI GAACNNNNNNTCC 2 cut(s) 282, 314
Alw21I GWGCWC 2 cut(s) 1105, 1623
Alw26I GTCTC 5 cut(s) 253, 824, 1387, 1614, 1979
Alw44I GTGCAC 2 cut(s) 1101, 1619
AlwI GGATC 2 cut(s) 93, 2111
AoxI GGCC 2 cut(s) 953, 1192
ApaLI GTGCAC 2 cut(s) 1101, 1619
ApeKI GCWGC 4 cut(s) 203, 427, 1587, 1813
ApoI RAATTY 6 cut(s) 231, 594, 687, 1309, 1635, 1907
Asp700I GAANNNNTTC 1 cut(s) 68
AspLEI GCGC 4 cut(s) 177, 621, 900, 1602
AspS9I GGNCC 1 cut(s) 1706
AsuHPI GGTGA 3 cut(s) 529, 935, 1744
AvaII GGWCC 1 cut(s) 1706
AxyI CCTNAGG 1 cut(s) 1268
BaeGI GKGCMC 2 cut(s) 1105, 1623
BanI GGYRCC 1 cut(s) 618
BanII GRGCYC 1 cut(s) 1550
Bbv12I GWGCWC 2 cut(s) 1105, 1623
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 4 cut(s) 190, 439, 1599, 1800
BccI CCATC 5 cut(s) 395, 1103, 1375, 1934, 2018
BceAI ACGGC 1 cut(s) 1072
BcgI CGANNNNNNTGC 2 cut(s) 396, 430
BcoDI GTCTC 5 cut(s) 253, 824, 1387, 1614, 1979
BcuI ACTAGT 1 cut(s) 1873
BfaI CTAG 9 cut(s) 345, 1118, 1122, 1331, 1352, 1805, 1874, 1971, 2100
BfmI CTRYAG 2 cut(s) 73, 1713
BfoI RGCGCY 1 cut(s) 622
BfrI CTTAAG 1 cut(s) 1822
BfuAI ACCTGC 1 cut(s) 1070
BglII AGATCT 2 cut(s) 1333, 1729
BisI GCNGC 5 cut(s) 204, 428, 1439, 1588, 1814
BlsI GCNGC 5 cut(s) 205, 429, 1440, 1589, 1815
BmcAI AGTACT 1 cut(s) 1803
Bme18I GGWCC 1 cut(s) 1706
BmgT120I GGNCC 1 cut(s) 1706
BmiI GGNNCC 3 cut(s) 620, 1259, 1963
BmsI GCATC 7 cut(s) 111, 130, 190, 520, 1053, 1586, 1611
BpmI CTGGAG 2 cut(s) 841, 1583
Bpu10I CCTNAGC 3 cut(s) 6, 1262, 1919
BpuEI CTTGAG 3 cut(s) 370, 1616, 2050
BsaAI YACGTR 1 cut(s) 1618
BsaHI GRCGYC 1 cut(s) 619
BsaI GGTCTC 1 cut(s) 1614
BsaJI CCNNGG 1 cut(s) 950
BsaWI WCCGGW 1 cut(s) 1844
Bsc4I CCNNNNNNNGG 3 cut(s) 195, 670, 1761
Bse21I CCTNAGG 1 cut(s) 1268
BseDI CCNNGG 1 cut(s) 950
BseGI GGATG 2 cut(s) 205, 757
BseLI CCNNNNNNNGG 3 cut(s) 195, 670, 1761
BseMII CTCAG 6 cut(s) 347, 428, 1253, 1267, 1382, 1910
BseRI GAGGAG 2 cut(s) 233, 2054
BseSI GKGCMC 2 cut(s) 1105, 1623
BseXI GCAGC 4 cut(s) 190, 439, 1599, 1800
BsgI GTGCAG 3 cut(s) 902, 1098, 1668
Bsh1236I CGCG 3 cut(s) 41, 898, 1996
BshFI GGCC 2 cut(s) 955, 1194
BshNI GGYRCC 1 cut(s) 618
BsiHKAI GWGCWC 2 cut(s) 1105, 1623
BsiSI CCGG 2 cut(s) 1110, 1845
BslFI GGGAC 1 cut(s) 851
BslI CCNNNNNNNGG 3 cut(s) 195, 670, 1761
BsmAI GTCTC 5 cut(s) 253, 824, 1387, 1614, 1979
BsmFI GGGAC 1 cut(s) 851
BsmI GAATGC 1 cut(s) 1153
BsnI GGCC 2 cut(s) 955, 1194
Bso31I GGTCTC 1 cut(s) 1614
Bsp1286I GDGCHC 3 cut(s) 1105, 1550, 1623
Bsp143I GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
BspACI CCGC 3 cut(s) 41, 1438, 1996
BspANI GGCC 2 cut(s) 955, 1194
BspCNI CTCAG 6 cut(s) 348, 429, 1254, 1266, 1383, 1911
BspFNI CGCG 3 cut(s) 41, 898, 1996
BspLI GGNNCC 3 cut(s) 620, 1259, 1963
BspMI ACCTGC 1 cut(s) 1070
BspPI GGATC 2 cut(s) 93, 2111
BspQI GCTCTTC 1 cut(s) 1310
BspT107I GGYRCC 1 cut(s) 618
BspTI CTTAAG 1 cut(s) 1822
BspTNI GGTCTC 1 cut(s) 1614
BssECI CCNNGG 1 cut(s) 950
BssMI GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
BssNI GRCGYC 1 cut(s) 619
Bst4CI ACNGT 5 cut(s) 172, 1290, 1421, 1714, 1951
Bst6I CTCTTC 5 cut(s) 256, 418, 1177, 1310, 1455
BstACI GRCGYC 1 cut(s) 619
BstAFI CTTAAG 1 cut(s) 1822
BstBAI YACGTR 1 cut(s) 1618
BstC8I GCNNGC 6 cut(s) 39, 99, 270, 921, 1322, 2094
BstDEI CTNAG 9 cut(s) 6, 356, 437, 1253, 1262, 1268, 1337, 1391, 1919
BstF5I GGATG 2 cut(s) 205, 757
BstFNI CGCG 3 cut(s) 41, 898, 1996
BstH2I RGCGCY 1 cut(s) 622
BstHHI GCGC 4 cut(s) 177, 621, 900, 1602
BstKTI GATC 6 cut(s) 88, 309, 993, 1336, 1732, 2106
BstMAI GTCTC 5 cut(s) 253, 824, 1387, 1614, 1979
BstMBI GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
BstMWI GCNNNNNNNGC 4 cut(s) 361, 920, 1100, 1993
BstNSI RCATGY 4 cut(s) 798, 1324, 1478, 2068
BstSFI CTRYAG 2 cut(s) 73, 1713
BstSLI GKGCMC 2 cut(s) 1105, 1623
BstUI CGCG 3 cut(s) 41, 898, 1996
BstV1I GCAGC 4 cut(s) 190, 439, 1599, 1800
BstX2I RGATCY 2 cut(s) 1333, 1729
BstXI CCANNNNNNTGG 1 cut(s) 28
BstYI RGATCY 2 cut(s) 1333, 1729
Bsu36I CCTNAGG 1 cut(s) 1268
BsuRI GGCC 2 cut(s) 955, 1194
BtsCI GGATG 2 cut(s) 205, 757
BtsI GCAGTG 1 cut(s) 1158
BtsIMutI CAGTG 4 cut(s) 177, 1105, 1158, 1742
BveI ACCTGC 1 cut(s) 1070
Cac8I GCNNGC 6 cut(s) 39, 99, 270, 921, 1322, 2094
CfoI GCGC 4 cut(s) 177, 621, 900, 1602
Cfr13I GGNCC 1 cut(s) 1706
Csp6I GTAC 3 cut(s) 1414, 1802, 1848
CviQI GTAC 3 cut(s) 1414, 1802, 1848
DdeI CTNAG 9 cut(s) 6, 356, 437, 1253, 1262, 1268, 1337, 1391, 1919
DinI GGCGCC 1 cut(s) 620
DpnI GATC 6 cut(s) 87, 308, 992, 1335, 1731, 2105
DpnII GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
DraI TTTAAA 1 cut(s) 244
EaeI YGGCCR 1 cut(s) 953
Eam1104I CTCTTC 5 cut(s) 256, 418, 1177, 1310, 1455
EarI CTCTTC 5 cut(s) 256, 418, 1177, 1310, 1455
Eco24I GRGCYC 1 cut(s) 1550
Eco31I GGTCTC 1 cut(s) 1614
Eco47I GGWCC 1 cut(s) 1706
Eco57I CTGAAG 1 cut(s) 1718
Eco81I CCTNAGG 1 cut(s) 1268
EcoRI GAATTC 2 cut(s) 1635, 1907
EcoT38I GRGCYC 1 cut(s) 1550
EgeI GGCGCC 1 cut(s) 620
EheI GGCGCC 1 cut(s) 620
FalI AAGNNNNNCTT 4 cut(s) 256, 288, 924, 956
FaqI GGGAC 1 cut(s) 851
Fnu4HI GCNGC 5 cut(s) 204, 428, 1439, 1588, 1814
FokI GGATG 2 cut(s) 212, 764
FriOI GRGCYC 1 cut(s) 1550
Fsp4HI GCNGC 5 cut(s) 204, 428, 1439, 1588, 1814
FspAI RTGCGCAY 1 cut(s) 176
FspBI CTAG 9 cut(s) 345, 1118, 1122, 1331, 1352, 1805, 1874, 1971, 2100
FspI TGCGCA 1 cut(s) 176
GlaI GCGC 4 cut(s) 176, 620, 899, 1601
GluI GCNGC 5 cut(s) 204, 428, 1439, 1588, 1814
GsuI CTGGAG 2 cut(s) 841, 1583
HaeII RGCGCY 1 cut(s) 622
HaeIII GGCC 2 cut(s) 955, 1194
HapII CCGG 2 cut(s) 1110, 1845
HhaI GCGC 4 cut(s) 177, 621, 900, 1602
Hin1I GRCGYC 1 cut(s) 619
Hin6I GCGC 4 cut(s) 175, 619, 898, 1600
HinP1I GCGC 4 cut(s) 175, 619, 898, 1600
HincII GTYRAC 2 cut(s) 1349, 1480
HindII GTYRAC 2 cut(s) 1349, 1480
HindIII AAGCTT 2 cut(s) 767, 1691
HinfI GANTC 6 cut(s) 339, 660, 839, 965, 1558, 1789
HpaII CCGG 2 cut(s) 1110, 1845
HphI GGTGA 3 cut(s) 529, 935, 1744
Hpy166II GTNNAC 8 cut(s) 301, 520, 1103, 1349, 1433, 1480, 1621, 1947
Hpy188I TCNGA 4 cut(s) 380, 423, 606, 970
Hpy8I GTNNAC 8 cut(s) 301, 520, 1103, 1349, 1433, 1480, 1621, 1947
HpyAV CCTTC 7 cut(s) 258, 677, 1002, 1561, 1952, 2029, 2081
HpyCH4III ACNGT 5 cut(s) 172, 1290, 1421, 1714, 1951
HpyCH4IV ACGT 3 cut(s) 466, 1617, 1626
HpyF10VI GCNNNNNNNGC 4 cut(s) 361, 920, 1100, 1993
HpyF3I CTNAG 9 cut(s) 6, 356, 437, 1253, 1262, 1268, 1337, 1391, 1919
HpySE526I ACGT 3 cut(s) 466, 1617, 1626
Hsp92I GRCGYC 1 cut(s) 619
HspAI GCGC 4 cut(s) 175, 619, 898, 1600
KasI GGCGCC 1 cut(s) 618
Kzo9I GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
LguI GCTCTTC 1 cut(s) 1310
LmnI GCTCC 2 cut(s) 1886, 1961
Lsp1109I GCAGC 4 cut(s) 190, 439, 1599, 1800
LweI GCATC 7 cut(s) 111, 130, 190, 520, 1053, 1586, 1611
MaeI CTAG 9 cut(s) 345, 1118, 1122, 1331, 1352, 1805, 1874, 1971, 2100
MaeII ACGT 3 cut(s) 466, 1617, 1626
MaeIII GTNAC 4 cut(s) 505, 1229, 1676, 1719
MalI GATC 6 cut(s) 87, 308, 992, 1335, 1731, 2105
MboI GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
MfeI CAATTG 3 cut(s) 980, 1134, 1982
MflI RGATCY 2 cut(s) 1333, 1729
MhlI GDGCHC 3 cut(s) 1105, 1550, 1623
Mly113I GGCGCC 1 cut(s) 619
MlyI GAGTC 2 cut(s) 833, 959
MmeI TCCRAC 4 cut(s) 457, 1612, 1733, 2085
MroXI GAANNNNTTC 1 cut(s) 68
MseI TTAA 5 cut(s) 243, 285, 696, 1521, 1823
MslI CAYNNNNRTG 5 cut(s) 26, 1161, 1494, 1644, 1876
MspCI CTTAAG 1 cut(s) 1822
MspI CCGG 2 cut(s) 1110, 1845
MunI CAATTG 3 cut(s) 980, 1134, 1982
Mva1269I GAATGC 1 cut(s) 1153
MvnI CGCG 3 cut(s) 41, 898, 1996
MwoI GCNNNNNNNGC 4 cut(s) 361, 920, 1100, 1993
NarI GGCGCC 1 cut(s) 619
NdeII GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
NlaIV GGNNCC 3 cut(s) 620, 1259, 1963
NmeAIII GCCGAG 1 cut(s) 931
NmuCI GTSAC 2 cut(s) 1229, 1676
NsbI TGCGCA 1 cut(s) 176
NspI RCATGY 4 cut(s) 798, 1324, 1478, 2068
PaeI GCATGC 1 cut(s) 1324
PciI ACATGT 2 cut(s) 794, 2064
PciSI GCTCTTC 1 cut(s) 1310
PcsI WCGNNNNNNNCGW 1 cut(s) 1623
PctI GAATGC 1 cut(s) 1153
PdmI GAANNNNTTC 1 cut(s) 68
PfeI GAWTC 4 cut(s) 339, 660, 1558, 1789
PflFI GACNNNGTC 1 cut(s) 1862
PflMI CCANNNNNTGG 1 cut(s) 1761
PkrI GCNGC 5 cut(s) 205, 429, 1440, 1589, 1815
PleI GAGTC 2 cut(s) 833, 959
PluTI GGCGCC 1 cut(s) 622
PpsI GAGTC 2 cut(s) 833, 959
Ppu21I YACGTR 1 cut(s) 1618
PscI ACATGT 2 cut(s) 794, 2064
PspN4I GGNNCC 3 cut(s) 620, 1259, 1963
PspPI GGNCC 1 cut(s) 1706
PsuI RGATCY 2 cut(s) 1333, 1729
PsyI GACNNNGTC 1 cut(s) 1862
RsaI GTAC 3 cut(s) 1415, 1803, 1849
RsaNI GTAC 3 cut(s) 1414, 1802, 1848
RseI CAYNNNNRTG 5 cut(s) 26, 1161, 1494, 1644, 1876
SapI GCTCTTC 1 cut(s) 1310
SaqAI TTAA 5 cut(s) 243, 285, 696, 1521, 1823
SatI GCNGC 5 cut(s) 204, 428, 1439, 1588, 1814
Sau3AI GATC 6 cut(s) 85, 306, 990, 1333, 1729, 2103
Sau96I GGNCC 1 cut(s) 1706
ScaI AGTACT 1 cut(s) 1803
SchI GAGTC 2 cut(s) 833, 959
SduI GDGCHC 3 cut(s) 1105, 1550, 1623
SfaNI GCATC 7 cut(s) 111, 130, 190, 520, 1053, 1586, 1611
SfcI CTRYAG 2 cut(s) 73, 1713
SfoI GGCGCC 1 cut(s) 620
SinI GGWCC 1 cut(s) 1706
SmiMI CAYNNNNRTG 5 cut(s) 26, 1161, 1494, 1644, 1876
SmlI CTYRAG 4 cut(s) 349, 1595, 1822, 2029
SmoI CTYRAG 4 cut(s) 349, 1595, 1822, 2029
SpeI ACTAGT 1 cut(s) 1873
SphI GCATGC 1 cut(s) 1324
SsiI CCGC 3 cut(s) 41, 1438, 1996
SspDI GGCGCC 1 cut(s) 618
SspI AATATT 1 cut(s) 885
SspMI CTAG 9 cut(s) 345, 1118, 1122, 1331, 1352, 1805, 1874, 1971, 2100
TaaI ACNGT 5 cut(s) 172, 1290, 1421, 1714, 1951
TaiI ACGT 3 cut(s) 469, 1620, 1629
TaqI TCGA 2 cut(s) 228, 1544
TatI WGTACW 2 cut(s) 1413, 1801
TauI GCSGC 1 cut(s) 1441
TfiI GAWTC 4 cut(s) 339, 660, 1558, 1789
Tru1I TTAA 5 cut(s) 243, 285, 696, 1521, 1823
Tru9I TTAA 5 cut(s) 243, 285, 696, 1521, 1823
TscAI CASTG 4 cut(s) 177, 1105, 1158, 1742
TseFI GTSAC 2 cut(s) 1229, 1676
TseI GCWGC 4 cut(s) 203, 427, 1587, 1813
Tsp45I GTSAC 2 cut(s) 1229, 1676
TspDTI ATGAA 6 cut(s) 180, 768, 1058, 1212, 1238, 1628
TspRI CASTG 4 cut(s) 177, 1105, 1158, 1742
Tth111I GACNNNGTC 1 cut(s) 1862
Van91I CCANNNNNTGG 1 cut(s) 1761
Vha464I CTTAAG 1 cut(s) 1822
VneI GTGCAC 2 cut(s) 1101, 1619
VpaK11BI GGWCC 1 cut(s) 1706
XapI RAATTY 6 cut(s) 231, 594, 687, 1309, 1635, 1907
XbaI TCTAGA 1 cut(s) 1330
XceI RCATGY 4 cut(s) 798, 1324, 1478, 2068
XcmI CCANNNNNNNNNTGG 1 cut(s) 1371
XmnI GAANNNNTTC 1 cut(s) 68
XspI CTAG 9 cut(s) 345, 1118, 1122, 1331, 1352, 1805, 1874, 1971, 2100
ZrmI AGTACT 1 cut(s) 1803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.