Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0008115.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

51360 .. 54697

Gene Structure 3338 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0008115.1_g000012.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2922 bp

atggctgaggctgttgtgtcaattgttattgaaggaatcaagcccctcggagacttgatcgttcgggaggcaaaattcttgagtggagtgggctatcaagttgagcttgcacaagtcgagctacacttgatgagtgccttcctgaaagatgcagattcaagaactggagacgatgaagtggtacgcatttgggtgaaactcatcagagatgttgcttatgatttggaggatgttattgaatcttttgcattgaaagtggcttccaggaggagaggaggtaccatgaagattgctctgaaaaggtttgcctgcgtcttcaatgaaggaattgatcgtcacaagattgggtcagaaattgaggatattatgactacactttctcatttgaggtcaagtttgcaaagttataatataagacaaagtgatcctcctgaacgtgtcgcttctttcaagtttcaaaagcaacgagatcggaggcgaacctacgctcatgaaattgaaagtcatcttgttgggatagaggaaagcacagacatattggtgaaggagctagtgagagaaggaaagcgccaccgtgttgtttctatttgggggatgggcggctctggaaaaacaactcttgcaaaacaggtccatcttcaaaatgaagttaagcgtcattttgatggttttgcttgggtgtgtatatctcaacaatgtatcggaagagatgtgttggaagatattttagtcaaactcacttccccaccagaagagcgaaggaaacagatagcaaagatggaaaaagatgaaatagcaaagactctctgtagaatccaaacagaaaagagatgtctagtgatcctggatgatatatggactcacgaggcatggcattctttaaaacctggatttccggtcaatgaggaaacagagagccggatattactcaccactcgcaagaaggaagttgccttgcttgcatccagaaatgattttctccaccaacctcgacctctagatgaaaagcaaagctgggaactgtttcagaaaatagccataagtggaagcgacagttcaatttgtgcaaagaagacagaattaggaaagaagatgttggtacattgctcaggtctcccattagccatcagagtgctcgctggtcttctaagtagacgagagacagatgatgagtgggaaacagtacttagaaatgttaatgtatacataatgagaggcacaaatgtccttgatagacaaaatacaggtcaagactatggtgtattgagtgtcttggcattgagttatgatgatttaccatctcacttaaaactctgctttctatacttggcacaatatcctgaggatcatgagataccggtaaaaagattgactcaattatggattgcagaagggtttattacttcaacatcagaaatacaaggttcggtggaaataatggaagatgtatcatatggttgcctaactgaactggtggaaagatctatggttcaagttgtaaactatggtttaagtgggaaggtgaaaacttgtcgtctccatgatcttatgcaggacttgtgcttgcaaaaggcaaaagaggagaactttctcggtattgttaacttttctgttggtccggtatctaatgcaacattgattggtaaggttcgaagactcgccctccatttcgacgaaaaagttaaatatgagttcagtggtaaggatggaagagatggccatatcaggtctctagtatactttgccccaagattcttcgagcaaaagtggaacaaaagaataatacgatcaatattcaatgacttcaaattgcttagagtcttgaagtttgaaaatatgtgtagggagtttgagttaccaaagacgattgggaatctagtccacttgaggtttctgagtctgaaggatagtgcatttcgtgccttgccatcatctgtatctaatctggtacttttgcagactctagatctgcgtggttgtcttttatcctctggtttattagatattcgtttttctcggatcaggatgaccaaaatcagacatgtgttttcgaatatggagcaactgaggcatttatatttaccttctgagcactctgtaagtggtaagaaactgtcatttgcaaggctgcgcaatttgcagacgttgctcaatgtttcaatcgagaaatgtgatttgaatgatcttgttcagttaaccaatctgaaaaaactaggcataattgcatcacagcctagtcacttgaaaaagttgaagaatgtgttgatattaggaagtataacatatgagcatcttcggtcgctaactttgagcgtgtctcatggttgtgatgatttaccaagagatattgtattaaggtgtccccatttatacaagctgcaactgaacgggaaaattacagcattaccagaagagctccggggctatccaaatctcaccaagataaagctgacaaaaacagaactgaagggtgaccagattgaaatactggagaagctgcccaacttaagggtgctttacctcggtgggcattctttcgaatcagaaacaatggttttctcccaaggaggctttcctcatctggaatttcttacccttggaggtttggatgatttgaaggagtggagggtggagaaagaagccatgcctagtcttcagagattgcgcattgtatggtgctggagtttgcggacagttccagatgggcttcaggagattactaccctcaaggaattaacaattgacgggatgctcagtagattctgcagtagggttggggaaggaggagaggatttcgacaaaatcaaacatgtgccttctcttataatcacaaatattcatcattgggacgaggagccagaaatggaggaagcagcaggtgcgtcccaagtagtaggtacgggtccagtcatcaggaattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

973

Amino Acids

110.95

Weight (kDa)

8.51

Isoelectric Point (pI)

48.43

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	408, 2825
AarI	CACCTGC	1 cut(s)	2867
Acc16I	TGCGCA	2 cut(s)	2132, 2666
Acc36I	ACCTGC	1 cut(s)	2867
Acc65I	GGTACC	1 cut(s)	278
AccB1I	GGYRCC	1 cut(s)	278
AccI	GTMKAC	3 cut(s)	1153, 1203, 1737
AciI	CCGC	2 cut(s)	600, 2689
AclWI	GGATC	4 cut(s)	419, 835, 1353, 2027
AcoI	YGGCCR	1 cut(s)	1717
AcsI	RAATTY	2 cut(s)	74, 2585
AcuI	CTGAAG	4 cut(s)	1922, 2486, 2639, 2693
AfaI	GTAC	6 cut(s)	183, 280, 1101, 1185, 1950, 2899
AfiI	CCNNNNNNNGG	1 cut(s)	2508
AflII	CTTAAG	1 cut(s)	2506
AflIII	ACRYGT	3 cut(s)	436, 2041, 2809
AgeI	ACCGGT	1 cut(s)	1357
AjnI	CCWGG	3 cut(s)	263, 843, 886
AjuI	GAANNNNNNNTTGG	2 cut(s)	2556, 2588
AluBI	AGCT	8 cut(s)	106, 121, 550, 1014, 2377, 2416, 2449, 2497
AluI	AGCT	8 cut(s)	106, 121, 550, 1014, 2377, 2416, 2449, 2497
Alw21I	GWGCWC	3 cut(s)	1137, 2094, 2418
Alw26I	GTCTC	7 cut(s)	45, 162, 1118, 1154, 1541, 1734, 2322
AlwI	GGATC	4 cut(s)	419, 835, 1353, 2027
AoxI	GGCC	1 cut(s)	1717
ApeKI	GCWGC	4 cut(s)	2128, 2377, 2497, 2873
ApoI	RAATTY	2 cut(s)	74, 2585
ArsI	GACNNNNNNTTYG	2 cut(s)	1231, 1263
AsiGI	ACCGGT	1 cut(s)	1357
Asp700I	GAANNNNTTC	1 cut(s)	1023
Asp718I	GGTACC	1 cut(s)	278
AspLEI	GCGC	3 cut(s)	570, 2133, 2667
AspS9I	GGNCC	3 cut(s)	631, 1616, 2903
AsuC2I	CCSGG	1 cut(s)	2420
AsuHPI	GGTGA	6 cut(s)	205, 553, 922, 1534, 2428, 2483
AsuII	TTCGAA	3 cut(s)	1651, 2051, 2538
AvaII	GGWCC	3 cut(s)	631, 1616, 2903
AxyI	CCTNAGG	1 cut(s)	1341
BalI	TGGCCA	1 cut(s)	1719
BanI	GGYRCC	1 cut(s)	278
BanII	GRGCYC	1 cut(s)	2418
BauI	CACGAG	1 cut(s)	863
BbsI	GAAGAC	5 cut(s)	307, 1079, 1136, 1660, 2645
Bbv12I	GWGCWC	3 cut(s)	1137, 2094, 2418
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	4 cut(s)	2115, 2364, 2484, 2885
BcgI	CGANNNNNNTGC	2 cut(s)	452, 486
BciT130I	CCWGG	3 cut(s)	265, 845, 888
BcnI	CCSGG	1 cut(s)	2420
BcoDI	GTCTC	7 cut(s)	45, 162, 1118, 1154, 1541, 1734, 2322
BfaI	CTAG	9 cut(s)	551, 836, 998, 1733, 1877, 1964, 2213, 2235, 2649
BfmI	CTRYAG	2 cut(s)	808, 2764
BfoI	RGCGCY	1 cut(s)	571
BfrI	CTTAAG	1 cut(s)	2506
BfuAI	ACCTGC	1 cut(s)	2867
BglII	AGATCT	2 cut(s)	1481, 1966
BisI	GCNGC	5 cut(s)	601, 2129, 2378, 2498, 2874
BlsI	GCNGC	5 cut(s)	602, 2130, 2379, 2499, 2875
BmcAI	AGTACT	1 cut(s)	1185
Bme1390I	CCNGG	4 cut(s)	265, 845, 888, 2420
Bme18I	GGWCC	3 cut(s)	631, 1616, 2903
BmgT120I	GGNCC	3 cut(s)	631, 1616, 2903
BmiI	GGNNCC	3 cut(s)	280, 2856, 2904
BmrFI	CCNGG	4 cut(s)	265, 845, 888, 2420
BmsI	GCATC	5 cut(s)	139, 971, 2234, 2299, 2739
BpiI	GAAGAC	5 cut(s)	307, 1079, 1136, 1660, 2645
BplI	GAGNNNNNCTC	2 cut(s)	2302, 2334
BpmI	CTGGAG	3 cut(s)	186, 2510, 2701
Bpu10I	CCTNAGC	2 cut(s)	6, 1108
Bpu14I	TTCGAA	3 cut(s)	1651, 2051, 2538
BpuEI	CTTGAG	3 cut(s)	100, 1906, 2711
BpuMI	CCSGG	1 cut(s)	2420
BsaI	GGTCTC	2 cut(s)	1118, 1734
BsaJI	CCNNGG	5 cut(s)	46, 2419, 2521, 2563, 2596
BsaWI	WCCGGW	3 cut(s)	895, 1357, 1618
BsaXI	ACNNNNNCTCC	6 cut(s)	262, 292, 1647, 1677, 1838, 1868
Bsc4I	CCNNNNNNNGG	1 cut(s)	2508
Bse118I	RCCGGY	1 cut(s)	1357
Bse1I	ACTGG	4 cut(s)	169, 1476, 2493, 2906
Bse21I	CCTNAGG	1 cut(s)	1341
Bse3DI	GCAATG	1 cut(s)	1102
BseBI	CCWGG	3 cut(s)	265, 845, 888
BseDI	CCNNGG	5 cut(s)	46, 2419, 2521, 2563, 2596
BseGI	GGATG	8 cut(s)	235, 600, 853, 962, 1711, 2031, 2614, 2754
BseLI	CCNNNNNNNGG	1 cut(s)	2508
BseMI	GCAATG	1 cut(s)	1102
BseMII	CTCAG	6 cut(s)	1122, 1332, 1886, 2057, 2079, 2767
BseNI	ACTGG	4 cut(s)	169, 1476, 2493, 2906
BseRI	GAGGAG	5 cut(s)	283, 288, 1595, 2799, 2867
BseXI	GCAGC	4 cut(s)	2115, 2364, 2484, 2885
BseYI	CCCAGC	1 cut(s)	1014
Bsh1285I	CGRYCG	1 cut(s)	2300
BshFI	GGCC	1 cut(s)	1719
BshNI	GGYRCC	1 cut(s)	278
BshTI	ACCGGT	1 cut(s)	1357
BsiEI	CGRYCG	1 cut(s)	2300
BsiHKAI	GWGCWC	3 cut(s)	1137, 2094, 2418
BsiSI	CCGG	5 cut(s)	896, 919, 1358, 1619, 2419
BslFI	GGGAC	3 cut(s)	2346, 2861, 2869
BslI	CCNNNNNNNGG	1 cut(s)	2508
BsmAI	GTCTC	7 cut(s)	45, 162, 1118, 1154, 1541, 1734, 2322
BsmBI	CGTCTC	2 cut(s)	162, 1541
BsmFI	GGGAC	3 cut(s)	2346, 2861, 2869
BsmI	GAATGC	2 cut(s)	874, 2530
BsnI	GGCC	1 cut(s)	1719
Bso31I	GGTCTC	2 cut(s)	1118, 1734
Bsp119I	TTCGAA	3 cut(s)	1651, 2051, 2538
Bsp1286I	GDGCHC	3 cut(s)	1137, 2094, 2418
BspACI	CCGC	2 cut(s)	600, 2689
BspANI	GGCC	1 cut(s)	1719
BspCNI	CTCAG	6 cut(s)	1121, 1333, 1887, 2058, 2080, 2766
BspHI	TCATGA	2 cut(s)	490, 1348
BspLI	GGNNCC	3 cut(s)	280, 2856, 2904
BspMAI	CTGCAG	1 cut(s)	2768
BspMI	ACCTGC	1 cut(s)	2867
BspPI	GGATC	4 cut(s)	419, 835, 1353, 2027
BspQI	GCTCTTC	2 cut(s)	747, 2406
BspT104I	TTCGAA	3 cut(s)	1651, 2051, 2538
BspT107I	GGYRCC	1 cut(s)	278
BspTI	CTTAAG	1 cut(s)	2506
BspTNI	GGTCTC	2 cut(s)	1118, 1734
BsrDI	GCAATG	1 cut(s)	1102
BsrFI	RCCGGY	1 cut(s)	1357
BsrI	ACTGG	4 cut(s)	169, 1476, 2493, 2906
BssAI	RCCGGY	1 cut(s)	1357
BssECI	CCNNGG	5 cut(s)	46, 2419, 2521, 2563, 2596
BssNAI	GTATAC	2 cut(s)	1204, 1738
BssSI	CACGAG	1 cut(s)	863
BssT1I	CCWWGG	2 cut(s)	2563, 2596
Bst1107I	GTATAC	2 cut(s)	1204, 1738
Bst2BI	CACGAG	1 cut(s)	863
Bst2UI	CCWGG	3 cut(s)	265, 845, 888
Bst4CI	ACNGT	6 cut(s)	575, 1023, 1055, 1183, 2115, 2695
Bst6I	CTCTTC	4 cut(s)	700, 747, 1705, 2406
BstAFI	CTTAAG	1 cut(s)	2506
BstAPI	GCANNNNNTGC	3 cut(s)	1919, 2146, 2879
BstBI	TTCGAA	3 cut(s)	1651, 2051, 2538
BstC8I	GCNNGC	5 cut(s)	108, 310, 960, 1137, 1565
BstEII	GGTNACC	1 cut(s)	2471
BstF5I	GGATG	8 cut(s)	235, 600, 853, 962, 1711, 2031, 2614, 2754
BstH2I	RGCGCY	1 cut(s)	571
BstHHI	GCGC	3 cut(s)	570, 2133, 2667
BstMAI	GTCTC	7 cut(s)	45, 162, 1118, 1154, 1541, 1734, 2322
BstMCI	CGRYCG	1 cut(s)	2300
BstMWI	GCNNNNNNNGC	6 cut(s)	959, 1919, 2068, 2137, 2146, 2879
BstNI	CCWGG	3 cut(s)	265, 845, 888
BstNSI	RCATGY	2 cut(s)	2045, 2813
BstPI	GGTNACC	1 cut(s)	2471
BstSCI	CCNGG	4 cut(s)	263, 843, 886, 2418
BstSFI	CTRYAG	2 cut(s)	808, 2764
BstV1I	GCAGC	4 cut(s)	2115, 2364, 2484, 2885
BstV2I	GAAGAC	5 cut(s)	307, 1079, 1136, 1660, 2645
BstX2I	RGATCY	2 cut(s)	1481, 1966
BstYI	RGATCY	2 cut(s)	1481, 1966
BstZ17I	GTATAC	2 cut(s)	1204, 1738
Bsu36I	CCTNAGG	1 cut(s)	1341
BsuRI	GGCC	1 cut(s)	1719
BtsCI	GGATG	8 cut(s)	235, 600, 853, 962, 1711, 2031, 2614, 2754
BtsIMutI	CAGTG	1 cut(s)	1702
BveI	ACCTGC	1 cut(s)	2867
Cac8I	GCNNGC	5 cut(s)	108, 310, 960, 1137, 1565
CciI	TCATGA	2 cut(s)	490, 1348
CfoI	GCGC	3 cut(s)	570, 2133, 2667
Cfr10I	RCCGGY	1 cut(s)	1357
Cfr13I	GGNCC	3 cut(s)	631, 1616, 2903
CseI	GACGC	3 cut(s)	301, 644, 2871
Csp6I	GTAC	6 cut(s)	182, 279, 1100, 1184, 1949, 2898
CspAI	ACCGGT	1 cut(s)	1357
CviAII	CATG	9 cut(s)	283, 491, 870, 1349, 1541, 2042, 2321, 2644, 2810
CviQI	GTAC	6 cut(s)	182, 279, 1100, 1184, 1949, 2898
DraI	TTTAAA	1 cut(s)	882
EaeI	YGGCCR	1 cut(s)	1717
Eam1104I	CTCTTC	4 cut(s)	700, 747, 1705, 2406
EarI	CTCTTC	4 cut(s)	700, 747, 1705, 2406
Ecl136II	GAGCTC	1 cut(s)	2416
Eco130I	CCWWGG	2 cut(s)	2563, 2596
Eco24I	GRGCYC	1 cut(s)	2418
Eco31I	GGTCTC	2 cut(s)	1118, 1734
Eco47I	GGWCC	3 cut(s)	631, 1616, 2903
Eco53kI	GAGCTC	1 cut(s)	2416
Eco57I	CTGAAG	4 cut(s)	1922, 2486, 2639, 2693
Eco81I	CCTNAGG	1 cut(s)	1341
Eco91I	GGTNACC	1 cut(s)	2471
EcoICRI	GAGCTC	1 cut(s)	2416
EcoO65I	GGTNACC	1 cut(s)	2471
EcoRII	CCWGG	3 cut(s)	263, 843, 886
EcoT14I	CCWWGG	2 cut(s)	2563, 2596
EcoT38I	GRGCYC	1 cut(s)	2418
ErhI	CCWWGG	2 cut(s)	2563, 2596
Esp3I	CGTCTC	2 cut(s)	162, 1541
FaeI	CATG	9 cut(s)	286, 494, 873, 1352, 1544, 2045, 2324, 2647, 2813
FalI	AAGNNNNNCTT	2 cut(s)	90, 122
FaqI	GGGAC	3 cut(s)	2346, 2861, 2869
FatI	CATG	9 cut(s)	282, 490, 869, 1348, 1540, 2041, 2320, 2643, 2809
FauNDI	CATATG	2 cut(s)	1453, 2284
FblI	GTMKAC	3 cut(s)	1153, 1203, 1737
Fnu4HI	GCNGC	5 cut(s)	601, 2129, 2378, 2498, 2874
FokI	GGATG	8 cut(s)	242, 607, 860, 949, 1718, 2038, 2621, 2761
FriOI	GRGCYC	1 cut(s)	2418
Fsp4HI	GCNGC	5 cut(s)	601, 2129, 2378, 2498, 2874
FspBI	CTAG	9 cut(s)	551, 836, 998, 1733, 1877, 1964, 2213, 2235, 2649
FspI	TGCGCA	2 cut(s)	2132, 2666
GlaI	GCGC	3 cut(s)	569, 2132, 2666
GluI	GCNGC	5 cut(s)	601, 2129, 2378, 2498, 2874
GsaI	CCCAGC	1 cut(s)	1018
GsuI	CTGGAG	3 cut(s)	186, 2510, 2701
HaeII	RGCGCY	1 cut(s)	571
HaeIII	GGCC	1 cut(s)	1719
HapII	CCGG	5 cut(s)	896, 919, 1358, 1619, 2419
HgaI	GACGC	3 cut(s)	301, 644, 2871
HhaI	GCGC	3 cut(s)	570, 2133, 2667
Hin1II	CATG	9 cut(s)	286, 494, 873, 1352, 1544, 2045, 2324, 2647, 2813
Hin6I	GCGC	3 cut(s)	568, 2131, 2665
HinP1I	GCGC	3 cut(s)	568, 2131, 2665
HincII	GTYRAC	2 cut(s)	1603, 2196
HindII	GTYRAC	2 cut(s)	1603, 2196
HpaI	GTTAAC	2 cut(s)	1603, 2196
HpaII	CCGG	5 cut(s)	896, 919, 1358, 1619, 2419
HphI	GGTGA	6 cut(s)	205, 553, 922, 1534, 2428, 2483
Hpy166II	GTNNAC	7 cut(s)	1154, 1204, 1501, 1603, 1738, 1882, 2196
Hpy8I	GTNNAC	7 cut(s)	1154, 1204, 1501, 1603, 1738, 1882, 2196
Hpy99I	CGWCG	1 cut(s)	1676
HpyCH4III	ACNGT	6 cut(s)	575, 1023, 1055, 1183, 2115, 2695
HpyCH4IV	ACGT	2 cut(s)	436, 2144
HpyF10VI	GCNNNNNNNGC	6 cut(s)	959, 1919, 2068, 2137, 2146, 2879
HpySE526I	ACGT	2 cut(s)	436, 2144
Hsp92II	CATG	9 cut(s)	286, 494, 873, 1352, 1544, 2045, 2324, 2647, 2813
HspAI	GCGC	3 cut(s)	568, 2131, 2665
KpnI	GGTACC	1 cut(s)	282
KspAI	GTTAAC	2 cut(s)	1603, 2196
LguI	GCTCTTC	2 cut(s)	747, 2406
LmnI	GCTCC	4 cut(s)	547, 2059, 2421, 2854
Lsp1109I	GCAGC	4 cut(s)	2115, 2364, 2484, 2885
LweI	GCATC	5 cut(s)	139, 971, 2234, 2299, 2739
MaeI	CTAG	9 cut(s)	551, 836, 998, 1733, 1877, 1964, 2213, 2235, 2649
MaeII	ACGT	2 cut(s)	436, 2144
MaeIII	GTNAC	4 cut(s)	335, 1854, 2237, 2471
MfeI	CAATTG	2 cut(s)	21, 2739
MflI	RGATCY	2 cut(s)	1481, 1966
MhlI	GDGCHC	3 cut(s)	1137, 2094, 2418
MlsI	TGGCCA	1 cut(s)	1719
MluNI	TGGCCA	1 cut(s)	1719
MlyI	GAGTC	7 cut(s)	796, 853, 1366, 1650, 1827, 1906, 1954
MmeI	TCCRAC	1 cut(s)	696
Mox20I	TGGCCA	1 cut(s)	1719
MroXI	GAANNNNTTC	1 cut(s)	1023
MscI	TGGCCA	1 cut(s)	1719
MslI	CAYNNNNRTG	5 cut(s)	191, 539, 663, 1130, 2325
Msp20I	TGGCCA	1 cut(s)	1719
MspCI	CTTAAG	1 cut(s)	2506
MspI	CCGG	5 cut(s)	896, 919, 1358, 1619, 2419
MspR9I	CCNGG	4 cut(s)	265, 845, 888, 2420
MunI	CAATTG	2 cut(s)	21, 2739
Mva1269I	GAATGC	2 cut(s)	874, 2530
MvaI	CCWGG	3 cut(s)	265, 845, 888
MwoI	GCNNNNNNNGC	6 cut(s)	959, 1919, 2068, 2137, 2146, 2879
NciI	CCSGG	1 cut(s)	2420
NdeI	CATATG	2 cut(s)	1453, 2284
NlaIII	CATG	9 cut(s)	286, 494, 873, 1352, 1544, 2045, 2324, 2647, 2813
NlaIV	GGNNCC	3 cut(s)	280, 2856, 2904
NmuCI	GTSAC	3 cut(s)	335, 2237, 2471
NsbI	TGCGCA	2 cut(s)	2132, 2666
NspI	RCATGY	2 cut(s)	2045, 2813
NspV	TTCGAA	3 cut(s)	1651, 2051, 2538
PagI	TCATGA	2 cut(s)	490, 1348
PaqCI	CACCTGC	1 cut(s)	2867
PciI	ACATGT	2 cut(s)	2041, 2809
PciSI	GCTCTTC	2 cut(s)	747, 2406
PctI	GAATGC	2 cut(s)	874, 2530
PdmI	GAANNNNTTC	1 cut(s)	1023
PfeI	GAWTC	8 cut(s)	36, 155, 239, 813, 1752, 1873, 2540, 2760
PfoI	TCCNGGA	2 cut(s)	263, 843
PinAI	ACCGGT	1 cut(s)	1357
PkrI	GCNGC	5 cut(s)	602, 2130, 2379, 2499, 2875
PleI	GAGTC	7 cut(s)	796, 853, 1366, 1650, 1826, 1905, 1954
PpsI	GAGTC	7 cut(s)	796, 853, 1366, 1650, 1826, 1905, 1954
PscI	ACATGT	2 cut(s)	2041, 2809
PsiI	TTATAA	2 cut(s)	408, 2825
Psp124BI	GAGCTC	1 cut(s)	2418
Psp6I	CCWGG	3 cut(s)	263, 843, 886
PspEI	GGTNACC	1 cut(s)	2471
PspFI	CCCAGC	1 cut(s)	1014
PspGI	CCWGG	3 cut(s)	263, 843, 886
PspN4I	GGNNCC	3 cut(s)	280, 2856, 2904
PspPI	GGNCC	3 cut(s)	631, 1616, 2903
PstI	CTGCAG	1 cut(s)	2768
PsuI	RGATCY	2 cut(s)	1481, 1966
RsaI	GTAC	6 cut(s)	183, 280, 1101, 1185, 1950, 2899
RsaNI	GTAC	6 cut(s)	182, 279, 1100, 1184, 1949, 2898
RseI	CAYNNNNRTG	5 cut(s)	191, 539, 663, 1130, 2325
SacI	GAGCTC	1 cut(s)	2418
SapI	GCTCTTC	2 cut(s)	747, 2406
SatI	GCNGC	5 cut(s)	601, 2129, 2378, 2498, 2874
Sau96I	GGNCC	3 cut(s)	631, 1616, 2903
ScaI	AGTACT	1 cut(s)	1185
SchI	GAGTC	7 cut(s)	796, 853, 1366, 1650, 1827, 1906, 1954
ScrFI	CCNGG	4 cut(s)	265, 845, 888, 2420
SduI	GDGCHC	3 cut(s)	1137, 2094, 2418
SfaNI	GCATC	5 cut(s)	139, 971, 2234, 2299, 2739
SfcI	CTRYAG	2 cut(s)	808, 2764
SfuI	TTCGAA	3 cut(s)	1651, 2051, 2538
SinI	GGWCC	3 cut(s)	631, 1616, 2903
SmiMI	CAYNNNNRTG	5 cut(s)	191, 539, 663, 1130, 2325
SmlI	CTYRAG	4 cut(s)	79, 1885, 2506, 2726
SmoI	CTYRAG	4 cut(s)	79, 1885, 2506, 2726
SsiI	CCGC	2 cut(s)	600, 2689
SspI	AATATT	2 cut(s)	1794, 2836
SspMI	CTAG	9 cut(s)	551, 836, 998, 1733, 1877, 1964, 2213, 2235, 2649
SstI	GAGCTC	1 cut(s)	2418
StyD4I	CCNGG	4 cut(s)	263, 843, 886, 2418
StyI	CCWWGG	2 cut(s)	2563, 2596
TaaI	ACNGT	6 cut(s)	575, 1023, 1055, 1183, 2115, 2695
TaiI	ACGT	2 cut(s)	439, 2147
TaqI	TCGA	9 cut(s)	117, 991, 1651, 1671, 1758, 2051, 2163, 2538, 2796
TaqII	GACCGA	1 cut(s)	2286
TatI	WGTACW	1 cut(s)	1183
TauI	GCSGC	1 cut(s)	603
TfiI	GAWTC	8 cut(s)	36, 155, 239, 813, 1752, 1873, 2540, 2760
TscAI	CASTG	1 cut(s)	1702
TseFI	GTSAC	3 cut(s)	335, 2237, 2471
TseI	GCWGC	4 cut(s)	2128, 2377, 2497, 2873
Tsp45I	GTSAC	3 cut(s)	335, 2237, 2471
TspDTI	ATGAA	8 cut(s)	189, 299, 336, 507, 660, 804, 1017, 2828
TspRI	CASTG	1 cut(s)	1702
Vha464I	CTTAAG	1 cut(s)	2506
VpaK11BI	GGWCC	3 cut(s)	631, 1616, 2903
XapI	RAATTY	2 cut(s)	74, 2585
XbaI	TCTAGA	2 cut(s)	997, 1963
XceI	RCATGY	2 cut(s)	2045, 2813
XmiI	GTMKAC	3 cut(s)	1153, 1203, 1737
XmnI	GAANNNNTTC	1 cut(s)	1023
XspI	CTAG	9 cut(s)	551, 836, 998, 1733, 1877, 1964, 2213, 2235, 2649
ZrmI	AGTACT	1 cut(s)	1185

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.