RchiOBHm_Chr1g0345941

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
38132314 .. 38135684
3371 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57223

Sequence Viewer

Length: 2934 bp
ATGGCTGAGGCTGTTGTGTCAATTGTTATTGAAGGAATCAAGCCCCTCGGAGACTTGATCGTTCGGGAGGCAAAATTGTTGAGTGGAGTGGGCTATCAAGTTGAGCTTGCACAAGTCGAGCTACACTTGATGAGTGCCTTCCTGAAAGATGCAGATTCAAGAACTGGAGACGATGAAGTGGTACGCATTTGGGTGAAACTGATCAGAGATGTTGCTTATGATTTGGAGGATGTTATTGAATCTTTTGCATTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACCATGAAGATTGCTCTGAAAAGGTTTGCCTGCGTCTTCAATGAAGGAATTGATCGTCACAAGATTGGGTCAGAAATTGAGGATATTATGACCACACTTTCTCATTTGAGGTCAAGTTTGCAAAGTTATAATATAAGACAAAGTGATCCTCCTCAACGTGTCGCTTCTTTCAAGTTTCAAAAGCAACGAGATCTGAGGCGAACCTACGCTCATGAAATTGAAAGTCATCTTGTTGGGTTAGAGGAAAGCACAGACATATTGGTGAAGGAGCTAGTGAGAGAAGGAAAGCGCCACCGTGTTGTTTCTATTTGGGGGATGGGCGGCTCTGGAAAAACAACTCTTGCAAAACAGGTCCATCTTCAAAATGAAGTTAAGCGTCATTTTGATGGTTTTGCTTGGGTGTGTATATCTCAACAATGTATCGGAAGAGATGTGTTGGAAGATATTTTAGTCAAACTCACTTCCCCACCAGAAGAGCGAAGGAAACAGATAGCAAAGATGGAAAAAGATGAAATAGCAAAGACTCTCTGTGGAATCCAAACAGAAAAGAGATGTCTAGTGATCCTTGATGATATATGGACTCACGAGGCATGGCATTCTTTAAAACCTGGATTTCCGGTCAATGAGGAAACAGAGAGCCGGATATTACTCACCACTCGCAAGAAGGAAGTTGCCTTGCTTGCATCCAGAAATGATTTTCTCCACCAACCTCGACCTCTAGATGAAAAGCAAAGCTGGGAACTGTTTCAGAAAATAGCCATAAGTGGAAGCGACAGTACAATTTGTGCAAAGAAGACAGAATTAGGAAAGAAGATGTTGGTACATTGCTCAGGTCTCCCATTAGCCATCAGAATGCTCGCTGGTCTTCTAAGTAGACGAGAGACAGATGATGAGTGGGAAACAGTACTTAGAAATGTTAATGTATACATAATGAGAGGCACAAATGTCCTTGATAGACAAAATACAGGTCAAGACTATGGTGTATTGAGTGTCTTGGCATTGAGTTATGATGATTTACCATCTCACTTAAAACTCTGCTTTCTATACTTGGCACAATATCCTGAGGATCATGAGATACCGGTAAAAAGATTGACTCAATTATGGATTGCAGAAGGGTTTATTACTTCAACATCAGAAATACAAGGTTCGGTGGAAATAATGGAAGATGTATCATATGGTTGCCTAACTGAACTGGTGGAAAGATCTATGGTTCAAGTTGTAAACTATGGTTTAAGTGGGAAGGTGAAAACTTGTCGTCTCCATGATCTTATGCAGGACTTGTGCTTGCAAAAGGCAAAAGAGGAGAACTTTCTCGGTGTTGGTAACTTTTCTGTTGGTCCGGTATCTAATGCAACACTGATTGGTAAGGTTCGAAGACTTGCCCTCCATTTGGACGAAAATGTTAAATATGAGTTCAGTGGTAAGGATGGAAGAGATGGCCATATCAGATCTCTATTATACTTTGCCCCAAAATACTTCAATCGAAAGTGGAACAAAAGAATAATACGATCAATATTCAATGACTTCAAATTGCTTAGAGTCTTGAAGTTTGAAAATATAGATAGAGAGTTTGAGTTACCAAAGACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTGAAGGATAGTGCATTTCGTGCCTTGCCATCATCTGTATCTAATCTGGTACTTTTGCAGACTCTAGATCTGCGTGGTTGTCTTTTATCCTATTGTTTTTTTTGGATGACCAAAATCAGATATGTGTTTTCGAATATGGAGCAACTGAGGCATTTATATTTACCTTCTCAGCACTCTGTAAGTGGTAAGAAACTGTCATTTGCAAGGCTGCGCAATTTGCAGACGTTGCTCAATGTTTCAATCGAGAAATGTGATTTGAATGATCTTGTTCAGTTAACCAATCTCAAAAAACTAGGCATAATTGCATCACAGCCTAGTCACTTGAAAAGGTTGAAGAATGTGTTGATATTAAGAAGTATAACATATGAGCATCTTCGGTCGCTAACTTTGACCGTGTATCGTGGTTGTGATGATTTACGAAGAGATATTGTATTAAGGTGTCCCCATTTATACAAGCTGCAACTGAACGGGAAAATTACAGCATTACCAGAAGAGCTCCTGGGCTATCCAAATCTCACCAAGATAAAGCTGAGAGGAACAAGACTGAAGGGTGACCAGATTGAAATACTGGAGAAGCTGCCCAATTTAAGGGTGCTTTACCTCGATGTGTTTTCTTTCGAATCAGAAACAATGGTTTTCTCCCAAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTCATTACTTGCGTGATTTGAAGGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCGCATTAAATATTGCAAAGAATTGCTGGCAGTTCCAGATGGGCTTCAGGATATTACTACCCTCAAGGAATTAACAATTGACCGGATGCCCAGTAGATTCTGCAGTAGGTTTGGGGAAGGAGGAGAGGATTTCTACAAAATCAAACATGTGCCTTCTCTTATAATCACAAATATTCTTCATTTGGACGAGGAGCCAGAAATGGAGGAAGCAGCAGGGGCGTCCCGAGTAGTAGTTACGGGTCCAGTCAGCGACTCTCATCAGGAATTAACTGTGGATGGTATGTGTGACTAA

Protein Analysis

977

Amino Acids

111.87

Weight (kDa)

8.55

Isoelectric Point (pI)

49.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 91 7.9e-20 Rx N-terminal domain
NB-ARC PF00931 175 - 349 7.9e-41 NB-ARC domain
WHD_DRP PF23559 446 - 521 1.6e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 598 - 907 3.9e-34 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 408, 2804
Acc16I TGCGCA 2 cut(s) 2111, 2645
Acc65I GGTACC 1 cut(s) 278
AccB1I GGYRCC 1 cut(s) 278
AccI GTMKAC 2 cut(s) 1153, 1203
AciI CCGC 1 cut(s) 600
AclWI GGATC 3 cut(s) 419, 835, 1353
AcoI YGGCCR 1 cut(s) 1717
AcsI RAATTY 1 cut(s) 2564
AcuI CTGAAG 4 cut(s) 1922, 2465, 2618, 2672
AcyI GRCGYC 1 cut(s) 2861
AfaI GTAC 6 cut(s) 183, 280, 1057, 1101, 1185, 1950
AfiI CCNNNNNNNGG 2 cut(s) 1669, 2487
AflIII ACRYGT 2 cut(s) 436, 2788
AgeI ACCGGT 1 cut(s) 1357
AjnI CCWGG 3 cut(s) 263, 886, 2397
AjuI GAANNNNNNNTTGG 2 cut(s) 2535, 2567
AluBI AGCT 8 cut(s) 106, 121, 550, 1014, 2356, 2395, 2428, 2476
AluI AGCT 8 cut(s) 106, 121, 550, 1014, 2356, 2395, 2428, 2476
Alw21I GWGCWC 1 cut(s) 2397
Alw26I GTCTC 5 cut(s) 45, 162, 1118, 1154, 1541
AlwI GGATC 3 cut(s) 419, 835, 1353
Ama87I CYCGRG 1 cut(s) 2865
AoxI GGCC 1 cut(s) 1717
ApeKI GCWGC 4 cut(s) 2107, 2356, 2476, 2852
ApoI RAATTY 1 cut(s) 2564
ArsI GACNNNNNNTTYG 2 cut(s) 1231, 1263
AsiGI ACCGGT 1 cut(s) 1357
Asp700I GAANNNNTTC 1 cut(s) 1023
Asp718I GGTACC 1 cut(s) 278
AspLEI GCGC 3 cut(s) 570, 2112, 2646
AspS9I GGNCC 3 cut(s) 631, 1616, 2882
AsuHPI GGTGA 6 cut(s) 205, 553, 922, 1534, 2407, 2462
AsuII TTCGAA 3 cut(s) 1651, 2030, 2517
AvaI CYCGRG 1 cut(s) 2865
AvaII GGWCC 3 cut(s) 631, 1616, 2882
AxyI CCTNAGG 1 cut(s) 1341
BalI TGGCCA 1 cut(s) 1719
BanI GGYRCC 1 cut(s) 278
BanII GRGCYC 1 cut(s) 2397
BarI GAAGNNNNNNTAC 2 cut(s) 1039, 1071
BauI CACGAG 1 cut(s) 863
BbsI GAAGAC 5 cut(s) 307, 1079, 1136, 1660, 2624
Bbv12I GWGCWC 1 cut(s) 2397
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 4 cut(s) 2094, 2343, 2463, 2864
BciT130I CCWGG 3 cut(s) 265, 888, 2399
BclI TGATCA 1 cut(s) 201
BcoDI GTCTC 5 cut(s) 45, 162, 1118, 1154, 1541
BfaI CTAG 8 cut(s) 551, 836, 998, 1877, 1964, 2192, 2214, 2628
BfmI CTRYAG 1 cut(s) 2743
BfoI RGCGCY 1 cut(s) 571
BglII AGATCT 4 cut(s) 469, 1481, 1727, 1966
BisI GCNGC 5 cut(s) 601, 2108, 2357, 2477, 2853
BlsI GCNGC 5 cut(s) 602, 2109, 2358, 2478, 2854
BmcAI AGTACT 1 cut(s) 1185
Bme1390I CCNGG 3 cut(s) 265, 888, 2399
Bme18I GGWCC 3 cut(s) 631, 1616, 2882
BmeT110I CYCGRG 1 cut(s) 2865
BmgT120I GGNCC 3 cut(s) 631, 1616, 2882
BmiI GGNNCC 3 cut(s) 280, 2835, 2883
BmrFI CCNGG 3 cut(s) 265, 888, 2399
BmrI ACTGGG 1 cut(s) 2727
BmsI GCATC 5 cut(s) 139, 971, 2213, 2278, 2718
BmuI ACTGGG 1 cut(s) 2727
BpiI GAAGAC 5 cut(s) 307, 1079, 1136, 1660, 2624
BpmI CTGGAG 2 cut(s) 186, 2489
Bpu10I CCTNAGC 2 cut(s) 6, 1108
Bpu14I TTCGAA 3 cut(s) 1651, 2030, 2517
BpuEI CTTGAG 2 cut(s) 1906, 2690
BsaHI GRCGYC 1 cut(s) 2861
BsaI GGTCTC 1 cut(s) 1118
BsaJI CCNNGG 3 cut(s) 46, 2398, 2542
BsaWI WCCGGW 4 cut(s) 895, 1357, 1618, 2724
BsaXI ACNNNNNCTCC 4 cut(s) 262, 292, 1647, 1677
Bsc4I CCNNNNNNNGG 2 cut(s) 1669, 2487
Bse118I RCCGGY 1 cut(s) 1357
Bse1I ACTGG 5 cut(s) 169, 1476, 2472, 2733, 2885
Bse21I CCTNAGG 1 cut(s) 1341
Bse3DI GCAATG 1 cut(s) 1102
BseBI CCWGG 3 cut(s) 265, 888, 2399
BseDI CCNNGG 3 cut(s) 46, 2398, 2542
BseGI GGATG 7 cut(s) 235, 600, 962, 1711, 2010, 2733, 2923
BseLI CCNNNNNNNGG 2 cut(s) 1669, 2487
BseMI GCAATG 1 cut(s) 1102
BseMII CTCAG 7 cut(s) 464, 1122, 1332, 1886, 2036, 2081, 2420
BseNI ACTGG 5 cut(s) 169, 1476, 2472, 2733, 2885
BseRI GAGGAG 6 cut(s) 283, 288, 420, 1595, 2778, 2846
BseXI GCAGC 4 cut(s) 2094, 2343, 2463, 2864
BseYI CCCAGC 1 cut(s) 1014
Bsh1285I CGRYCG 1 cut(s) 2279
BshFI GGCC 1 cut(s) 1719
BshNI GGYRCC 1 cut(s) 278
BshTI ACCGGT 1 cut(s) 1357
BsiEI CGRYCG 1 cut(s) 2279
BsiHKAI GWGCWC 1 cut(s) 2397
BsiHKCI CYCGRG 1 cut(s) 2865
BsiSI CCGG 5 cut(s) 896, 919, 1358, 1619, 2725
BslFI GGGAC 2 cut(s) 2325, 2848
BslI CCNNNNNNNGG 2 cut(s) 1669, 2487
BsmAI GTCTC 5 cut(s) 45, 162, 1118, 1154, 1541
BsmBI CGTCTC 2 cut(s) 162, 1541
BsmFI GGGAC 2 cut(s) 2325, 2848
BsmI GAATGC 2 cut(s) 874, 1137
BsnI GGCC 1 cut(s) 1719
Bso31I GGTCTC 1 cut(s) 1118
BsoBI CYCGRG 1 cut(s) 2865
Bsp119I TTCGAA 3 cut(s) 1651, 2030, 2517
Bsp1286I GDGCHC 1 cut(s) 2397
BspACI CCGC 1 cut(s) 600
BspANI GGCC 1 cut(s) 1719
BspCNI CTCAG 7 cut(s) 465, 1121, 1333, 1887, 2037, 2080, 2421
BspHI TCATGA 2 cut(s) 490, 1348
BspLI GGNNCC 3 cut(s) 280, 2835, 2883
BspMAI CTGCAG 1 cut(s) 2747
BspPI GGATC 3 cut(s) 419, 835, 1353
BspQI GCTCTTC 2 cut(s) 747, 2385
BspT104I TTCGAA 3 cut(s) 1651, 2030, 2517
BspT107I GGYRCC 1 cut(s) 278
BspTNI GGTCTC 1 cut(s) 1118
BsrDI GCAATG 1 cut(s) 1102
BsrFI RCCGGY 1 cut(s) 1357
BsrI ACTGG 5 cut(s) 169, 1476, 2472, 2733, 2885
BssAI RCCGGY 1 cut(s) 1357
BssECI CCNNGG 3 cut(s) 46, 2398, 2542
BssNAI GTATAC 1 cut(s) 1204
BssNI GRCGYC 1 cut(s) 2861
BssSI CACGAG 1 cut(s) 863
BssT1I CCWWGG 1 cut(s) 2542
Bst1107I GTATAC 1 cut(s) 1204
Bst2BI CACGAG 1 cut(s) 863
Bst2UI CCWGG 3 cut(s) 265, 888, 2399
Bst4CI ACNGT 7 cut(s) 575, 1023, 1055, 1183, 2094, 2293, 2914
Bst6I CTCTTC 5 cut(s) 700, 747, 1705, 2314, 2385
BstACI GRCGYC 1 cut(s) 2861
BstAPI GCANNNNNTGC 2 cut(s) 1919, 2125
BstBI TTCGAA 3 cut(s) 1651, 2030, 2517
BstC8I GCNNGC 6 cut(s) 108, 310, 960, 1137, 1565, 2670
BstEII GGTNACC 1 cut(s) 2450
BstF5I GGATG 7 cut(s) 235, 600, 962, 1711, 2010, 2733, 2923
BstH2I RGCGCY 1 cut(s) 571
BstHHI GCGC 3 cut(s) 570, 2112, 2646
BstMAI GTCTC 5 cut(s) 45, 162, 1118, 1154, 1541
BstMCI CGRYCG 1 cut(s) 2279
BstMWI GCNNNNNNNGC 6 cut(s) 959, 1919, 2047, 2116, 2125, 2858
BstNI CCWGG 3 cut(s) 265, 888, 2399
BstNSI RCATGY 1 cut(s) 2792
BstPI GGTNACC 1 cut(s) 2450
BstSCI CCNGG 3 cut(s) 263, 886, 2397
BstSFI CTRYAG 1 cut(s) 2743
BstV1I GCAGC 4 cut(s) 2094, 2343, 2463, 2864
BstV2I GAAGAC 5 cut(s) 307, 1079, 1136, 1660, 2624
BstX2I RGATCY 4 cut(s) 469, 1481, 1727, 1966
BstYI RGATCY 4 cut(s) 469, 1481, 1727, 1966
BstZ17I GTATAC 1 cut(s) 1204
Bsu36I CCTNAGG 1 cut(s) 1341
BsuRI GGCC 1 cut(s) 1719
BtsCI GGATG 7 cut(s) 235, 600, 962, 1711, 2010, 2733, 2923
BtsIMutI CAGTG 2 cut(s) 1634, 1702
Cac8I GCNNGC 6 cut(s) 108, 310, 960, 1137, 1565, 2670
CciI TCATGA 2 cut(s) 490, 1348
CfoI GCGC 3 cut(s) 570, 2112, 2646
Cfr10I RCCGGY 1 cut(s) 1357
Cfr13I GGNCC 3 cut(s) 631, 1616, 2882
CseI GACGC 3 cut(s) 301, 644, 2850
Csp6I GTAC 6 cut(s) 182, 279, 1056, 1100, 1184, 1949
CspAI ACCGGT 1 cut(s) 1357
CviAII CATG 7 cut(s) 283, 491, 870, 1349, 1541, 2623, 2789
CviQI GTAC 6 cut(s) 182, 279, 1056, 1100, 1184, 1949
DraI TTTAAA 1 cut(s) 882
EaeI YGGCCR 1 cut(s) 1717
Eam1104I CTCTTC 5 cut(s) 700, 747, 1705, 2314, 2385
EarI CTCTTC 5 cut(s) 700, 747, 1705, 2314, 2385
Ecl136II GAGCTC 1 cut(s) 2395
Eco130I CCWWGG 1 cut(s) 2542
Eco24I GRGCYC 1 cut(s) 2397
Eco31I GGTCTC 1 cut(s) 1118
Eco47I GGWCC 3 cut(s) 631, 1616, 2882
Eco53kI GAGCTC 1 cut(s) 2395
Eco57I CTGAAG 4 cut(s) 1922, 2465, 2618, 2672
Eco81I CCTNAGG 1 cut(s) 1341
Eco88I CYCGRG 1 cut(s) 2865
Eco91I GGTNACC 1 cut(s) 2450
EcoICRI GAGCTC 1 cut(s) 2395
EcoO65I GGTNACC 1 cut(s) 2450
EcoRII CCWGG 3 cut(s) 263, 886, 2397
EcoT14I CCWWGG 1 cut(s) 2542
EcoT38I GRGCYC 1 cut(s) 2397
ErhI CCWWGG 1 cut(s) 2542
Esp3I CGTCTC 2 cut(s) 162, 1541
FaeI CATG 7 cut(s) 286, 494, 873, 1352, 1544, 2626, 2792
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 2 cut(s) 2325, 2848
FatI CATG 7 cut(s) 282, 490, 869, 1348, 1540, 2622, 2788
FauNDI CATATG 2 cut(s) 1453, 2263
FbaI TGATCA 1 cut(s) 201
FblI GTMKAC 2 cut(s) 1153, 1203
Fnu4HI GCNGC 5 cut(s) 601, 2108, 2357, 2477, 2853
FokI GGATG 7 cut(s) 242, 607, 949, 1718, 2017, 2740, 2930
FriOI GRGCYC 1 cut(s) 2397
Fsp4HI GCNGC 5 cut(s) 601, 2108, 2357, 2477, 2853
FspBI CTAG 8 cut(s) 551, 836, 998, 1877, 1964, 2192, 2214, 2628
FspI TGCGCA 2 cut(s) 2111, 2645
GlaI GCGC 3 cut(s) 569, 2111, 2645
GluI GCNGC 5 cut(s) 601, 2108, 2357, 2477, 2853
GsaI CCCAGC 1 cut(s) 1018
GsuI CTGGAG 2 cut(s) 186, 2489
HaeII RGCGCY 1 cut(s) 571
HaeIII GGCC 1 cut(s) 1719
HapII CCGG 5 cut(s) 896, 919, 1358, 1619, 2725
HgaI GACGC 3 cut(s) 301, 644, 2850
HhaI GCGC 3 cut(s) 570, 2112, 2646
Hin1I GRCGYC 1 cut(s) 2861
Hin1II CATG 7 cut(s) 286, 494, 873, 1352, 1544, 2626, 2792
Hin6I GCGC 3 cut(s) 568, 2110, 2644
HinP1I GCGC 3 cut(s) 568, 2110, 2644
HincII GTYRAC 1 cut(s) 2175
HindII GTYRAC 1 cut(s) 2175
HpaI GTTAAC 1 cut(s) 2175
HpaII CCGG 5 cut(s) 896, 919, 1358, 1619, 2725
HphI GGTGA 6 cut(s) 205, 553, 922, 1534, 2407, 2462
Hpy166II GTNNAC 5 cut(s) 1154, 1204, 1501, 1882, 2175
Hpy8I GTNNAC 5 cut(s) 1154, 1204, 1501, 1882, 2175
HpyCH4III ACNGT 7 cut(s) 575, 1023, 1055, 1183, 2094, 2293, 2914
HpyCH4IV ACGT 2 cut(s) 436, 2123
HpyF10VI GCNNNNNNNGC 6 cut(s) 959, 1919, 2047, 2116, 2125, 2858
HpySE526I ACGT 2 cut(s) 436, 2123
Hsp92I GRCGYC 1 cut(s) 2861
Hsp92II CATG 7 cut(s) 286, 494, 873, 1352, 1544, 2626, 2792
HspAI GCGC 3 cut(s) 568, 2110, 2644
KpnI GGTACC 1 cut(s) 282
Ksp22I TGATCA 1 cut(s) 201
KspAI GTTAAC 1 cut(s) 2175
LguI GCTCTTC 2 cut(s) 747, 2385
LmnI GCTCC 4 cut(s) 547, 2038, 2400, 2833
Lsp1109I GCAGC 4 cut(s) 2094, 2343, 2463, 2864
LweI GCATC 5 cut(s) 139, 971, 2213, 2278, 2718
MaeI CTAG 8 cut(s) 551, 836, 998, 1877, 1964, 2192, 2214, 2628
MaeII ACGT 2 cut(s) 436, 2123
MaeIII GTNAC 7 cut(s) 335, 1601, 1854, 2216, 2450, 2875, 2927
MfeI CAATTG 2 cut(s) 21, 2718
MflI RGATCY 4 cut(s) 469, 1481, 1727, 1966
MhlI GDGCHC 1 cut(s) 2397
MlsI TGGCCA 1 cut(s) 1719
MluNI TGGCCA 1 cut(s) 1719
MlyI GAGTC 7 cut(s) 796, 853, 1366, 1827, 1906, 1954, 2888
MmeI TCCRAC 1 cut(s) 696
Mox20I TGGCCA 1 cut(s) 1719
MroXI GAANNNNTTC 1 cut(s) 1023
MscI TGGCCA 1 cut(s) 1719
MslI CAYNNNNRTG 4 cut(s) 191, 539, 663, 1130
Msp20I TGGCCA 1 cut(s) 1719
MspI CCGG 5 cut(s) 896, 919, 1358, 1619, 2725
MspR9I CCNGG 3 cut(s) 265, 888, 2399
MunI CAATTG 2 cut(s) 21, 2718
Mva1269I GAATGC 2 cut(s) 874, 1137
MvaI CCWGG 3 cut(s) 265, 888, 2399
MwoI GCNNNNNNNGC 6 cut(s) 959, 1919, 2047, 2116, 2125, 2858
NdeI CATATG 2 cut(s) 1453, 2263
NlaIII CATG 7 cut(s) 286, 494, 873, 1352, 1544, 2626, 2792
NlaIV GGNNCC 3 cut(s) 280, 2835, 2883
NmuCI GTSAC 4 cut(s) 335, 2216, 2450, 2927
NsbI TGCGCA 2 cut(s) 2111, 2645
NspI RCATGY 1 cut(s) 2792
NspV TTCGAA 3 cut(s) 1651, 2030, 2517
PagI TCATGA 2 cut(s) 490, 1348
PciI ACATGT 1 cut(s) 2788
PciSI GCTCTTC 2 cut(s) 747, 2385
PctI GAATGC 2 cut(s) 874, 1137
PdmI GAANNNNTTC 1 cut(s) 1023
PfeI GAWTC 7 cut(s) 36, 155, 239, 813, 1873, 2519, 2739
PfoI TCCNGGA 1 cut(s) 263
PinAI ACCGGT 1 cut(s) 1357
PkrI GCNGC 5 cut(s) 602, 2109, 2358, 2478, 2854
PleI GAGTC 7 cut(s) 796, 853, 1366, 1826, 1905, 1954, 2888
PpsI GAGTC 7 cut(s) 796, 853, 1366, 1826, 1905, 1954, 2888
PscI ACATGT 1 cut(s) 2788
PsiI TTATAA 2 cut(s) 408, 2804
Psp124BI GAGCTC 1 cut(s) 2397
Psp6I CCWGG 3 cut(s) 263, 886, 2397
PspEI GGTNACC 1 cut(s) 2450
PspFI CCCAGC 1 cut(s) 1014
PspGI CCWGG 3 cut(s) 263, 886, 2397
PspN4I GGNNCC 3 cut(s) 280, 2835, 2883
PspPI GGNCC 3 cut(s) 631, 1616, 2882
PstI CTGCAG 1 cut(s) 2747
PsuI RGATCY 4 cut(s) 469, 1481, 1727, 1966
RsaI GTAC 6 cut(s) 183, 280, 1057, 1101, 1185, 1950
RsaNI GTAC 6 cut(s) 182, 279, 1056, 1100, 1184, 1949
RseI CAYNNNNRTG 4 cut(s) 191, 539, 663, 1130
SacI GAGCTC 1 cut(s) 2397
SapI GCTCTTC 2 cut(s) 747, 2385
SatI GCNGC 5 cut(s) 601, 2108, 2357, 2477, 2853
Sau96I GGNCC 3 cut(s) 631, 1616, 2882
ScaI AGTACT 1 cut(s) 1185
SchI GAGTC 7 cut(s) 796, 853, 1366, 1827, 1906, 1954, 2888
ScrFI CCNGG 3 cut(s) 265, 888, 2399
SduI GDGCHC 1 cut(s) 2397
SfaNI GCATC 5 cut(s) 139, 971, 2213, 2278, 2718
SfcI CTRYAG 1 cut(s) 2743
SfuI TTCGAA 3 cut(s) 1651, 2030, 2517
SinI GGWCC 3 cut(s) 631, 1616, 2882
SmiMI CAYNNNNRTG 4 cut(s) 191, 539, 663, 1130
SmlI CTYRAG 2 cut(s) 1885, 2705
SmoI CTYRAG 2 cut(s) 1885, 2705
SsiI CCGC 1 cut(s) 600
SspI AATATT 3 cut(s) 1794, 2654, 2815
SspMI CTAG 8 cut(s) 551, 836, 998, 1877, 1964, 2192, 2214, 2628
SstI GAGCTC 1 cut(s) 2397
StyD4I CCNGG 3 cut(s) 263, 886, 2397
StyI CCWWGG 1 cut(s) 2542
TaaI ACNGT 7 cut(s) 575, 1023, 1055, 1183, 2094, 2293, 2914
TaiI ACGT 2 cut(s) 439, 2126
TaqI TCGA 8 cut(s) 117, 991, 1651, 1762, 2030, 2142, 2502, 2517
TaqII GACCGA 1 cut(s) 2265
TatI WGTACW 2 cut(s) 1055, 1183
TauI GCSGC 1 cut(s) 603
TfiI GAWTC 7 cut(s) 36, 155, 239, 813, 1873, 2519, 2739
TscAI CASTG 2 cut(s) 1641, 1702
TseFI GTSAC 4 cut(s) 335, 2216, 2450, 2927
TseI GCWGC 4 cut(s) 2107, 2356, 2476, 2852
Tsp45I GTSAC 4 cut(s) 335, 2216, 2450, 2927
TspDTI ATGAA 9 cut(s) 189, 299, 336, 507, 660, 804, 1017, 2567, 2810
TspRI CASTG 2 cut(s) 1641, 1702
VpaK11BI GGWCC 3 cut(s) 631, 1616, 2882
XapI RAATTY 1 cut(s) 2564
XbaI TCTAGA 2 cut(s) 997, 1963
XceI RCATGY 1 cut(s) 2792
XmiI GTMKAC 2 cut(s) 1153, 1203
XmnI GAANNNNTTC 1 cut(s) 1023
XspI CTAG 8 cut(s) 551, 836, 998, 1877, 1964, 2192, 2214, 2628
ZrmI AGTACT 1 cut(s) 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.