RLG00000028838

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
29028937 .. 29029592
656 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000028838

Sequence Viewer

Length: 561 bp
ATGGAGAAGCTGCCTATCTTAAGGGTGCTTTTTCTCGGCCATGACTCGTTTGAAAAATCATTGGCTTTCTCTTTCTCCCAAGGAGGTTTTCCTCATCTTGAACTACTTTTTGCTGAATGGTTAAAATTACAAGAGTGGTCGGTGGAGAAAGGAGCCATTCCTAGACCCTACAGTTTGCGGATTAAATGTCGCTCTAAATTGAAACAAGTTCCTGAGGGGCTTCAACATATTACTACCCTCAAGAATTTAACCATCGAATGGATACCCAGCACATTCTGTAGTAGGGTTGTAGAAGGAGGAGAGGATTTCAACAAAATCAAACATGTCCCTTCTCTTATAATCACACATGTTATAAACTTTAAGAAAGACAAGGAGCCAGAAATGGAGGAAGCTGCAGGTAGCCCGATTTACATTTTTTGGGCTTTGCTTTCGTCTTTTGCGGCCTTAAATTCTTCAAACCTTCTCTTCCTCTCTCGTCCTACTTCAGCTGTGAGTTCTGTCTCCTCCTTCCTCTGCCCTTCTTCCCCTCACTGCTTCACACAGACTCGGTCACACAAGTAG

Protein Analysis

187

Amino Acids

21.05

Weight (kDa)

8.91

Isoelectric Point (pI)

50.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 338, 353
Acc36I ACCTGC 1 cut(s) 386
AccB7I CCANNNNNTGG 1 cut(s) 258
AciI CCGC 2 cut(s) 178, 440
AcoI YGGCCR 1 cut(s) 37
AcsI RAATTY 2 cut(s) 244, 448
AcuI CTGAAG 1 cut(s) 468
AfiI CCNNNNNNNGG 1 cut(s) 258
AflII CTTAAG 1 cut(s) 19
AflIII ACRYGT 2 cut(s) 322, 346
AgsI TTSAA 6 cut(s) 53, 101, 202, 224, 310, 456
AjuI GAANNNNNNNTTGG 2 cut(s) 72, 104
AluBI AGCT 3 cut(s) 10, 392, 488
AluI AGCT 3 cut(s) 10, 392, 488
Alw26I GTCTC 1 cut(s) 505
AoxI GGCC 2 cut(s) 37, 441
ApeKI GCWGC 2 cut(s) 10, 392
ApoI RAATTY 2 cut(s) 244, 448
AxyI CCTNAGG 1 cut(s) 213
BbvI GCAGC 1 cut(s) 379
BccI CCATC 1 cut(s) 260
BciVI GTATCC 1 cut(s) 255
BcoDI GTCTC 1 cut(s) 505
BfaI CTAG 1 cut(s) 162
BfmI CTRYAG 3 cut(s) 169, 277, 393
BfrI CTTAAG 1 cut(s) 19
BfuAI ACCTGC 1 cut(s) 386
BfuI GTATCC 1 cut(s) 255
BisI GCNGC 3 cut(s) 11, 393, 441
BlsI GCNGC 3 cut(s) 12, 394, 442
BmiI GGNNCC 2 cut(s) 154, 375
BpuEI CTTGAG 1 cut(s) 224
BsaJI CCNNGG 1 cut(s) 79
Bsc4I CCNNNNNNNGG 1 cut(s) 258
Bse21I CCTNAGG 1 cut(s) 213
BseDI CCNNGG 1 cut(s) 79
BseLI CCNNNNNNNGG 1 cut(s) 258
BseMII CTCAG 1 cut(s) 204
BseRI GAGGAG 2 cut(s) 312, 493
BseXI GCAGC 1 cut(s) 379
BseYI CCCAGC 1 cut(s) 266
BshFI GGCC 2 cut(s) 39, 443
BslFI GGGAC 1 cut(s) 311
BslI CCNNNNNNNGG 1 cut(s) 258
BsmAI GTCTC 1 cut(s) 505
BsmFI GGGAC 1 cut(s) 311
BsnI GGCC 2 cut(s) 39, 443
BspACI CCGC 2 cut(s) 178, 440
BspANI GGCC 2 cut(s) 39, 443
BspCNI CTCAG 1 cut(s) 205
BspLI GGNNCC 2 cut(s) 154, 375
BspMAI CTGCAG 1 cut(s) 397
BspMI ACCTGC 1 cut(s) 386
BspTI CTTAAG 1 cut(s) 19
BssECI CCNNGG 1 cut(s) 79
BssT1I CCWWGG 1 cut(s) 79
Bst4CI ACNGT 1 cut(s) 173
Bst6I CTCTTC 1 cut(s) 470
BstAFI CTTAAG 1 cut(s) 19
BstDEI CTNAG 1 cut(s) 213
BstMAI GTCTC 1 cut(s) 505
BstNSI RCATGY 2 cut(s) 326, 350
BstSFI CTRYAG 3 cut(s) 169, 277, 393
BstV1I GCAGC 1 cut(s) 379
Bsu36I CCTNAGG 1 cut(s) 213
BsuI GTATCC 1 cut(s) 255
BsuRI GGCC 2 cut(s) 39, 443
BtsI GCAGTG 1 cut(s) 529
BtsIMutI CAGTG 1 cut(s) 529
BveI ACCTGC 1 cut(s) 386
CviAII CATG 3 cut(s) 41, 323, 347
DdeI CTNAG 1 cut(s) 213
EaeI YGGCCR 1 cut(s) 37
Eam1104I CTCTTC 1 cut(s) 470
EarI CTCTTC 1 cut(s) 470
Eco130I CCWWGG 1 cut(s) 79
Eco57I CTGAAG 1 cut(s) 468
Eco81I CCTNAGG 1 cut(s) 213
EcoT14I CCWWGG 1 cut(s) 79
ErhI CCWWGG 1 cut(s) 79
FaeI CATG 3 cut(s) 44, 326, 350
FaiI YATR 6 cut(s) 42, 228, 324, 338, 348, 353
FaqI GGGAC 1 cut(s) 311
FatI CATG 3 cut(s) 40, 322, 346
Fnu4HI GCNGC 3 cut(s) 11, 393, 441
Fsp4HI GCNGC 3 cut(s) 11, 393, 441
FspBI CTAG 1 cut(s) 162
GluI GCNGC 3 cut(s) 11, 393, 441
GsaI CCCAGC 1 cut(s) 270
HaeIII GGCC 2 cut(s) 39, 443
Hin1II CATG 3 cut(s) 44, 326, 350
HinfI GANTC 2 cut(s) 44, 544
Hpy188III TCNNGA 3 cut(s) 98, 212, 241
HpyAV CCTTC 5 cut(s) 287, 339, 470, 517, 528
HpyCH4III ACNGT 1 cut(s) 173
HpyCH4V TGCA 1 cut(s) 395
HpyF3I CTNAG 1 cut(s) 213
Hsp92II CATG 3 cut(s) 44, 326, 350
LmnI GCTCC 2 cut(s) 152, 373
LpnPI CCDG 4 cut(s) 225, 280, 381, 390
Lsp1109I GCAGC 1 cut(s) 379
MaeI CTAG 1 cut(s) 162
MaeIII GTNAC 1 cut(s) 549
MboII GAAGA 3 cut(s) 444, 457, 513
MluCI AATT 4 cut(s) 125, 197, 244, 448
MlyI GAGTC 2 cut(s) 38, 538
MseI TTAA 6 cut(s) 20, 122, 183, 248, 360, 446
MspA1I CMGCKG 1 cut(s) 488
MspCI CTTAAG 1 cut(s) 19
NlaIII CATG 3 cut(s) 44, 326, 350
NlaIV GGNNCC 2 cut(s) 154, 375
NmeAIII GCCGAG 1 cut(s) 15
NmuCI GTSAC 1 cut(s) 549
NspI RCATGY 2 cut(s) 326, 350
PciI ACATGT 2 cut(s) 322, 346
PflFI GACNNNGTC 1 cut(s) 547
PflMI CCANNNNNTGG 1 cut(s) 258
PkrI GCNGC 3 cut(s) 12, 394, 442
PleI GAGTC 2 cut(s) 38, 538
PpsI GAGTC 2 cut(s) 38, 538
PscI ACATGT 2 cut(s) 322, 346
PsiI TTATAA 2 cut(s) 338, 353
PspFI CCCAGC 1 cut(s) 266
PspN4I GGNNCC 2 cut(s) 154, 375
PstI CTGCAG 1 cut(s) 397
PsyI GACNNNGTC 1 cut(s) 547
PvuII CAGCTG 1 cut(s) 488
SaqAI TTAA 6 cut(s) 20, 122, 183, 248, 360, 446
SatI GCNGC 3 cut(s) 11, 393, 441
SchI GAGTC 2 cut(s) 38, 538
SetI ASST 6 cut(s) 12, 88, 394, 400, 462, 490
SfcI CTRYAG 3 cut(s) 169, 277, 393
SmlI CTYRAG 2 cut(s) 19, 239
SmoI CTYRAG 2 cut(s) 19, 239
Sse9I AATT 4 cut(s) 125, 197, 244, 448
SsiI CCGC 2 cut(s) 178, 440
SspMI CTAG 1 cut(s) 162
StyI CCWWGG 1 cut(s) 79
TaaI ACNGT 1 cut(s) 173
TaqI TCGA 1 cut(s) 255
TaqII GACCGA 1 cut(s) 537
TasI AATT 4 cut(s) 125, 197, 244, 448
TauI GCSGC 1 cut(s) 443
Tru1I TTAA 6 cut(s) 20, 122, 183, 248, 360, 446
Tru9I TTAA 6 cut(s) 20, 122, 183, 248, 360, 446
TscAI CASTG 1 cut(s) 536
TseFI GTSAC 1 cut(s) 549
TseI GCWGC 2 cut(s) 10, 392
Tsp45I GTSAC 1 cut(s) 549
TspRI CASTG 1 cut(s) 536
Tth111I GACNNNGTC 1 cut(s) 547
Van91I CCANNNNNTGG 1 cut(s) 258
Vha464I CTTAAG 1 cut(s) 19
XapI RAATTY 2 cut(s) 244, 448
XceI RCATGY 2 cut(s) 326, 350
XspI CTAG 1 cut(s) 162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.