Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000004

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

30607725 .. 30608807

Gene Structure 1083 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_4G00309000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1083 bp

ATGATTTTATGCGAGACTTGTGCTTGCAAAAGGCAGAAGAGGAGAATTTTCTCCGAAATTATTAACTTCTCTACGGGACTGGTATCTAAGACACCACTCATTGGCAAGGTTCGAAGACTTGCCCTCCATTTGGATGAAAATGTTAAATATGATTTTAGTAGAGATGGAAGAGATGAGCACATTAGGTCTCTATTATACTTTACCCCAAAAGGGTTTGACCAAAAGTGGAAGAAAAAAGTAATGCGATCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTGAAGTTTGAAAATATAAAGAGAGAATTTCAGTTACCGAAAACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTAAAGCATAGTACATATAGTGGGTTGCCATCATCTGTTTCTAAGCTGGTACTTTTGCAAACTGTAGATCTGCGGTATAATTATTATTTATATGAAGGATCTTGTTTTGCTCGGGAGAGGGCGACCAGAATCAGAAATGTGTTTTGGAATATGGAGCAACTCATGAGGCATTTATATTTACCTTGGCGTCACTATATAAGTGAACAGAAACTCTCATTTGCAAGACTCTGCAATTTGCAGACGTTGGGTGATCTTCCAATTGAGAAATGTGATTTGAATGATCTTGTTCAGTTAACCAATCTGCAGAAAATATCTGTAATTGTATCACGGCCTAGCCACTTGGAAAAGTTCAAGAACATGTTGATATCAAGAAGTATAACATATGAGCATCTTCGATCGCTATCTTTGAAGCTAAACCGAGATGATAATGAGGATATAGCAAGAGATATAGTGTTAAGGTGTCCTTATATATACAAACTGCGACTGCTTGGGAAAATGACGGAGTTTCCAGAAGAGCTCTTGGGCTATCCAAAACTCACCAAGATAACGCTGGTTAGTACAGAACTGAGATGTGACCAGATAGAAATAGTGAAGATGCTGCCCAAGTTAAGGGTGCTTTACCTGGGTAGTAATGCTTTCAAATCAAAAACAATGGTTTTCTCCCCAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTAGTGCTTTGTTAGTTTGTTTATGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

360

Amino Acids

42.33

Weight (kDa)

9.69

Isoelectric Point (pI)

49.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_14	PF23598	78 - 353	3.6e-24	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	101
AciI	CCGC	1 cut(s)	430
AclWI	GGATC	1 cut(s)	463
AcsI	RAATTY	3 cut(s)	45, 305, 1043
AcuI	CTGAAG	1 cut(s)	302
AcyI	GRCGYC	1 cut(s)	544
AfaI	GTAC	3 cut(s)	370, 408, 916
AfiI	CCNNNNNNNGG	4 cut(s)	101, 130, 210, 966
AflIII	ACRYGT	1 cut(s)	714
AgsI	TTSAA	7 cut(s)	256, 265, 290, 634, 709, 766, 997
AjnI	CCWGG	2 cut(s)	978, 1021
AjuI	GAANNNNNNNTTGG	2 cut(s)	484, 516
AluBI	AGCT	3 cut(s)	403, 769, 874
AluI	AGCT	3 cut(s)	403, 769, 874
Alw21I	GWGCWC	2 cut(s)	180, 876
Alw26I	GTCTC	2 cut(s)	8, 192
AlwI	GGATC	1 cut(s)	463
Ama87I	CYCGRG	1 cut(s)	468
AoxI	GGCC	1 cut(s)	686
ApeKI	GCWGC	1 cut(s)	955
ApoI	RAATTY	3 cut(s)	45, 305, 1043
AsuHPI	GGTGA	2 cut(s)	617, 886
AsuII	TTCGAA	1 cut(s)	112
AvaI	CYCGRG	1 cut(s)	468
BanII	GRGCYC	1 cut(s)	876
BbsI	GAAGAC	1 cut(s)	121
Bbv12I	GWGCWC	2 cut(s)	180, 876
BbvI	GCAGC	1 cut(s)	942
BccI	CCATC	2 cut(s)	158, 394
BceAI	ACGGC	1 cut(s)	701
BcgI	CGANNNNNNTGC	1 cut(s)	36
BciT130I	CCWGG	2 cut(s)	980, 1023
BcoDI	GTCTC	2 cut(s)	8, 192
BfaI	CTAG	2 cut(s)	335, 690
BfmI	CTRYAG	2 cut(s)	420, 659
BglII	AGATCT	1 cut(s)	424
BisI	GCNGC	1 cut(s)	956
BlsI	GCNGC	1 cut(s)	957
Bme1390I	CCNGG	2 cut(s)	980, 1023
BmeT110I	CYCGRG	1 cut(s)	468
BmrFI	CCNGG	2 cut(s)	980, 1023
BmsI	GCATC	2 cut(s)	754, 942
BpiI	GAAGAC	1 cut(s)	121
Bpu14I	TTCGAA	1 cut(s)	112
BpuEI	CTTGAG	1 cut(s)	364
BsaBI	GATNNNNATC	1 cut(s)	757
BsaHI	GRCGYC	1 cut(s)	544
BsaI	GGTCTC	1 cut(s)	192
BsaJI	CCNNGG	3 cut(s)	539, 979, 1021
BsaXI	ACNNNNNCTCC	2 cut(s)	108, 138
Bsc4I	CCNNNNNNNGG	4 cut(s)	101, 130, 210, 966
Bse1I	ACTGG	1 cut(s)	84
Bse8I	GATNNNNATC	1 cut(s)	757
BseBI	CCWGG	2 cut(s)	980, 1023
BseDI	CCNNGG	3 cut(s)	539, 979, 1021
BseGI	GGATG	1 cut(s)	139
BseJI	GATNNNNATC	1 cut(s)	757
BseLI	CCNNNNNNNGG	4 cut(s)	101, 130, 210, 966
BseMII	CTCAG	2 cut(s)	344, 914
BseNI	ACTGG	1 cut(s)	84
BseRI	GAGGAG	1 cut(s)	55
BseXI	GCAGC	1 cut(s)	942
Bsh1285I	CGRYCG	1 cut(s)	755
BshFI	GGCC	1 cut(s)	688
BsiEI	CGRYCG	1 cut(s)	755
BsiHKAI	GWGCWC	2 cut(s)	180, 876
BsiHKCI	CYCGRG	1 cut(s)	468
BslFI	GGGAC	1 cut(s)	90
BslI	CCNNNNNNNGG	4 cut(s)	101, 130, 210, 966
BsmAI	GTCTC	2 cut(s)	8, 192
BsmFI	GGGAC	1 cut(s)	90
BsnI	GGCC	1 cut(s)	688
Bso31I	GGTCTC	1 cut(s)	192
BsoBI	CYCGRG	1 cut(s)	468
Bsp119I	TTCGAA	1 cut(s)	112
Bsp1286I	GDGCHC	2 cut(s)	180, 876
Bsp143I	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
BspACI	CCGC	1 cut(s)	430
BspANI	GGCC	1 cut(s)	688
BspCNI	CTCAG	2 cut(s)	345, 915
BspHI	TCATGA	1 cut(s)	519
BspMAI	CTGCAG	1 cut(s)	663
BspPI	GGATC	1 cut(s)	463
BspQI	GCTCTTC	1 cut(s)	864
BspT104I	TTCGAA	1 cut(s)	112
BspTNI	GGTCTC	1 cut(s)	192
BsrI	ACTGG	1 cut(s)	84
BssECI	CCNNGG	3 cut(s)	539, 979, 1021
BssMI	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
BssNI	GRCGYC	1 cut(s)	544
BssT1I	CCWWGG	1 cut(s)	539
Bst2UI	CCWGG	2 cut(s)	980, 1023
Bst4CI	ACNGT	1 cut(s)	421
Bst6I	CTCTTC	3 cut(s)	32, 163, 864
BstACI	GRCGYC	1 cut(s)	544
BstBI	TTCGAA	1 cut(s)	112
BstC8I	GCNNGC	1 cut(s)	25
BstDEI	CTNAG	6 cut(s)	87, 272, 353, 399, 923, 1055
BstF5I	GGATG	1 cut(s)	139
BstKTI	GATC	6 cut(s)	248, 427, 458, 610, 640, 755
BstMAI	GTCTC	2 cut(s)	8, 192
BstMBI	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
BstMCI	CGRYCG	1 cut(s)	755
BstNI	CCWGG	2 cut(s)	980, 1023
BstNSI	RCATGY	1 cut(s)	718
BstSCI	CCNGG	2 cut(s)	978, 1021
BstSFI	CTRYAG	2 cut(s)	420, 659
BstV1I	GCAGC	1 cut(s)	942
BstV2I	GAAGAC	1 cut(s)	121
BstX2I	RGATCY	2 cut(s)	424, 455
BstYI	RGATCY	2 cut(s)	424, 455
BsuRI	GGCC	1 cut(s)	688
BtsCI	GGATG	1 cut(s)	139
Cac8I	GCNNGC	1 cut(s)	25
CciI	TCATGA	1 cut(s)	519
CseI	GACGC	1 cut(s)	533
Csp6I	GTAC	3 cut(s)	369, 407, 915
CviAII	CATG	2 cut(s)	520, 715
CviJI	RGCY	7 cut(s)	403, 688, 693, 769, 874, 882, 1029
CviKI_1	RGCY	7 cut(s)	403, 688, 693, 769, 874, 882, 1029
CviQI	GTAC	3 cut(s)	369, 407, 915
DdeI	CTNAG	6 cut(s)	87, 272, 353, 399, 923, 1055
DpnI	GATC	6 cut(s)	247, 426, 457, 609, 639, 754
DpnII	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
Eam1104I	CTCTTC	3 cut(s)	32, 163, 864
EarI	CTCTTC	3 cut(s)	32, 163, 864
Ecl136II	GAGCTC	1 cut(s)	874
Eco130I	CCWWGG	1 cut(s)	539
Eco24I	GRGCYC	1 cut(s)	876
Eco31I	GGTCTC	1 cut(s)	192
Eco32I	GATATC	1 cut(s)	723
Eco53kI	GAGCTC	1 cut(s)	874
Eco57I	CTGAAG	1 cut(s)	302
Eco88I	CYCGRG	1 cut(s)	468
EcoICRI	GAGCTC	1 cut(s)	874
EcoRII	CCWGG	2 cut(s)	978, 1021
EcoRV	GATATC	1 cut(s)	723
EcoT14I	CCWWGG	1 cut(s)	539
EcoT38I	GRGCYC	1 cut(s)	876
ErhI	CCWWGG	1 cut(s)	539
FaeI	CATG	2 cut(s)	523, 718
FalI	AAGNNNNNCTT	2 cut(s)	805, 837
FaqI	GGGAC	1 cut(s)	90
FatI	CATG	2 cut(s)	519, 714
FauNDI	CATATG	1 cut(s)	739
Fnu4HI	GCNGC	1 cut(s)	956
FokI	GGATG	1 cut(s)	146
FriOI	GRGCYC	1 cut(s)	876
Fsp4HI	GCNGC	1 cut(s)	956
FspBI	CTAG	2 cut(s)	335, 690
GluI	GCNGC	1 cut(s)	956
HaeIII	GGCC	1 cut(s)	688
HgaI	GACGC	1 cut(s)	533
Hin1I	GRCGYC	1 cut(s)	544
Hin1II	CATG	2 cut(s)	523, 718
HincII	GTYRAC	1 cut(s)	651
HindII	GTYRAC	1 cut(s)	651
HinfI	GANTC	4 cut(s)	331, 355, 486, 582
HpaI	GTTAAC	1 cut(s)	651
HphI	GGTGA	2 cut(s)	617, 886
Hpy166II	GTNNAC	3 cut(s)	340, 560, 651
Hpy188I	TCNGA	4 cut(s)	55, 282, 354, 491
Hpy188III	TCNNGA	6 cut(s)	470, 520, 709, 726, 866, 1040
Hpy8I	GTNNAC	3 cut(s)	340, 560, 651
HpyAV	CCTTC	1 cut(s)	446
HpyCH4III	ACNGT	1 cut(s)	421
HpyCH4IV	ACGT	1 cut(s)	599
HpyCH4V	TGCA	6 cut(s)	27, 415, 578, 588, 595, 661
HpyF3I	CTNAG	6 cut(s)	87, 272, 353, 399, 923, 1055
HpySE526I	ACGT	1 cut(s)	599
Hsp92I	GRCGYC	1 cut(s)	544
Hsp92II	CATG	2 cut(s)	523, 718
KspAI	GTTAAC	1 cut(s)	651
Kzo9I	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
LguI	GCTCTTC	1 cut(s)	864
LmnI	GCTCC	1 cut(s)	511
Lsp1109I	GCAGC	1 cut(s)	942
LweI	GCATC	2 cut(s)	754, 942
MaeI	CTAG	2 cut(s)	335, 690
MaeII	ACGT	1 cut(s)	599
MaeIII	GTNAC	3 cut(s)	312, 545, 929
MalI	GATC	6 cut(s)	247, 426, 457, 609, 639, 754
MboI	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
MboII	GAAGA	8 cut(s)	49, 126, 180, 241, 602, 740, 881, 961
MfeI	CAATTG	1 cut(s)	615
MflI	RGATCY	2 cut(s)	424, 455
MhlI	GDGCHC	2 cut(s)	180, 876
MluCI	AATT	9 cut(s)	45, 57, 266, 305, 436, 589, 615, 675, 1043
MlyI	GAGTC	2 cut(s)	364, 576
MnlI	CCTC	8 cut(s)	33, 134, 339, 468, 516, 781, 1019, 1044
MseI	TTAA	5 cut(s)	63, 144, 650, 812, 965
MslI	CAYNNNNRTG	1 cut(s)	132
MspR9I	CCNGG	2 cut(s)	980, 1023
MunI	CAATTG	1 cut(s)	615
MvaI	CCWGG	2 cut(s)	980, 1023
NdeI	CATATG	1 cut(s)	739
NdeII	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
NlaIII	CATG	2 cut(s)	523, 718
NmuCI	GTSAC	2 cut(s)	545, 929
NspI	RCATGY	1 cut(s)	718
NspV	TTCGAA	1 cut(s)	112
PagI	TCATGA	1 cut(s)	519
PciI	ACATGT	1 cut(s)	714
PciSI	GCTCTTC	1 cut(s)	864
PfeI	GAWTC	2 cut(s)	331, 486
PflMI	CCANNNNNTGG	1 cut(s)	101
PkrI	GCNGC	1 cut(s)	957
Ple19I	CGATCG	1 cut(s)	755
PleI	GAGTC	2 cut(s)	363, 576
PpsI	GAGTC	2 cut(s)	363, 576
PscI	ACATGT	1 cut(s)	714
Psp124BI	GAGCTC	1 cut(s)	876
Psp6I	CCWGG	2 cut(s)	978, 1021
PspGI	CCWGG	2 cut(s)	978, 1021
PstI	CTGCAG	1 cut(s)	663
PsuI	RGATCY	2 cut(s)	424, 455
PvuI	CGATCG	1 cut(s)	755
RsaI	GTAC	3 cut(s)	370, 408, 916
RsaNI	GTAC	3 cut(s)	369, 407, 915
RseI	CAYNNNNRTG	1 cut(s)	132
SacI	GAGCTC	1 cut(s)	876
SapI	GCTCTTC	1 cut(s)	864
SaqAI	TTAA	5 cut(s)	63, 144, 650, 812, 965
SatI	GCNGC	1 cut(s)	956
Sau3AI	GATC	6 cut(s)	245, 424, 455, 607, 637, 752
SchI	GAGTC	2 cut(s)	364, 576
ScrFI	CCNGG	2 cut(s)	980, 1023
SduI	GDGCHC	2 cut(s)	180, 876
SfaNI	GCATC	2 cut(s)	754, 942
SfcI	CTRYAG	2 cut(s)	420, 659
SfuI	TTCGAA	1 cut(s)	112
SmiMI	CAYNNNNRTG	1 cut(s)	132
SmlI	CTYRAG	1 cut(s)	343
SmoI	CTYRAG	1 cut(s)	343
Sse9I	AATT	9 cut(s)	45, 57, 266, 305, 436, 589, 615, 675, 1043
SsiI	CCGC	1 cut(s)	430
SspMI	CTAG	2 cut(s)	335, 690
SstI	GAGCTC	1 cut(s)	876
StyD4I	CCNGG	2 cut(s)	978, 1021
StyI	CCWWGG	1 cut(s)	539
TaaI	ACNGT	1 cut(s)	421
TaiI	ACGT	1 cut(s)	602
TaqI	TCGA	2 cut(s)	112, 751
TasI	AATT	9 cut(s)	45, 57, 266, 305, 436, 589, 615, 675, 1043
TatI	WGTACW	2 cut(s)	368, 914
TfiI	GAWTC	2 cut(s)	331, 486
Tru1I	TTAA	5 cut(s)	63, 144, 650, 812, 965
Tru9I	TTAA	5 cut(s)	63, 144, 650, 812, 965
TseFI	GTSAC	2 cut(s)	545, 929
TseI	GCWGC	1 cut(s)	955
Tsp45I	GTSAC	2 cut(s)	545, 929
TspDTI	ATGAA	2 cut(s)	150, 465
TspGWI	ACGGA	1 cut(s)	872
Van91I	CCANNNNNTGG	1 cut(s)	101
XapI	RAATTY	3 cut(s)	45, 305, 1043
XceI	RCATGY	1 cut(s)	718
XcmI	CCANNNNNNNNNTGG	1 cut(s)	904
XspI	CTAG	2 cut(s)	335, 690

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.