AT1G58400

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
21695699 .. 21699695
3997 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G58400.2

Sequence Viewer

Length: 2703 bp
ATGGTCGAGGCAATTGTTTCATTTGGAGTAGAAAAGCTTTGGGACCGACTGACCCAAGAATACGAGCAATTTCAAGGAGTTGAAGATCGAATAGCTGAACTAAAAAGTAATCTAAACTTGTTAAAGTCCTTTTTGAAAGATGCAGAAGCCAAGAAAAATACAAGTCAGATGGTGCGACATTGTGTTGAAGAGATTAAAGAAATTGTTTATGATACGGAGAATATGATCGAAACGTTTATTCTCAAAGAAGCAGCCCGAAAAAGAAGTGGCATCATCAGGCGTATCACAAAACTAACTTGCATTAAAGTGCATCGTTGGGAATTTGCGTCCGATATTGGAGGCATAAGTAAGAGGATCTCTAAGGTGATTCAAGACATGCATAGTTTTGGAGTACAACAGATGATTTCCGATGGTAGTCAGTCTTCACATCTACTACAAGAAAGAGAAAGGGAGATGCGACAAACGTTTTCTAGGGGTTACGAAAGCGACTTTGTGGGGTTGGAGGTAAATGTTAAGAAACTGGTTGGATATTTGGTGGAGGAAGATGACATTCAAATTGTTTCGGTAACCGGGATGGGAGGTCTTGGTAAAACCACCCTTGCAAGACAAGTTTTTAACCATGAGGATGTTAAACATCAGTTTGATAGACTCGCATGGGTGTGTGTCTCACAAGAGTTTACTCGGAAAAATGTATGGCAAATGATCTTGCAGAATCTAACCTCTAGAGAAACGAAAGATGAAATCTTGCAAATGGAAGAAGCTGAACTCCATGATGAACTCTTTCAGCTATTGGAGACATCTAAATCATTAATTGTTTTTGATGACATATGGAAAGAAGAAGACTGGGGCCTAATCAATCCAATATTTCCACCAAAAAAAGAGACTATCGCAATGCATGGAAATAGAAGATATGTCAACTTTAAACCAGAATGCCTAACTATTCTAGAGAGTTGGATACTTTTCCAAAGAATTGCAATGCCAAGGGTAGATGAATCAGAATTCAAGGTTGATAAGGAAATGGAAATGATGGGTAAGCAAATGATTAAATATTGTGGAGGACTACCATTGGCCGTCAAAGTGTTGGGAGGGTTGTTAGCTGCAAAATACACTTTTCATGATTGGAAACGATTATCTGAGAATATTGGATGTCATATCGTGGGAAGAACCGATTTCAGTGACGGTAACAACAGTTCAGTTTACCATGTATTGTCTCTGAGCTTTGAAGAGTTGCCTAGTTATTTGAAGCATTGCTTCCTCTACTTGGCCCATTTTCCAGAAGATCATAACATAAAGGTAGAAAAATTGTCTTATTGTTGGGCTGCTGAAGGAATATTAGAACCTCGACATTACCATGGACAGACTATTCGAGATGTTGGAGAAAGCTACATAGAGGAGTTAGTGAGGAGAAATATGGTTATTGCCGAAAGAGATGTTACGACTTTGAGATTTGAAGCTTGTCATTTGCATGACATGATGAGAGAAGTTTGTTTGTTAAAAGCCAAAGAAGAGAACTTCGTTCAAATCGCAAGTATCCTCCCTCCAACCGCAAACTCGCAATATCCTGGTACATCTCGCAGATTTGTCTCACAAAATCCTACTACATTACATGTTAGTAGAGATATAAATAATCCAAAACTTCAATCTCTCCTTATTGTATGGGAGAACAGAAGAAAGAGTTGGAAGCTATTAGGTTCAAGCTTTATAAGGTTAGAACTACTGAGGGTATTAGATCTCTATAAAGCCAAGTTTGAAGGGAGAAATTTACCTTCTGGCATTGGAAAGCTCATCCACTTGAGATACTTGAACTTAGATTTGGCTCGTGTATCTCGTCTACCTTCTTCTCTAGGAAACCTAAGGTTGCTGATCTATCTAGACATAAATGTATGCACGAAATCTCTATTCGTGCCCAATTGCTTGATGGGGATGCATGAATTAAGATACCTTAGACTACCATTTAATACGTCGAAGGAGATAAAGTTGGGACTGTGTAATCTCGTAAACTTGGAGACCTTAGAGAATTTCTCAACAGAGAATAGCAGCTTAGAGGATCTTCGTGGTATGGTAAGTTTGAGGACTCTCACCATTGGTTTATTTAAGCACATTAGTAAAGAGACTCTGTTTGCATCAATACTTGGGATGAGGCACCTGGAAAATCTTAGCATAAGGACACCAGACGGGTCTTCAAAGTTTAAAAGGATAATGGAAGATGGAATCGTATTGGATGCCATTCATCTAAAACAATTGAATTTGAGGTTATATATGCCAAAGTTACCTGATGAACAACACTTCCCTTCTCACCTTACAAGCATATCTCTAGATGGTTGTTGTTTGGTGGAGGATCCGTTACCGATTCTAGAGAAATTACTTGAGTTGAAAGAGGTTCGTTTAGACTTTCGAGCTTTCTGTGGGAAGAGAATGGTTAGCTCGGACGGTGGGTTTCCTCAATTGCACAGGCTATATATATGGGGATTAGCTGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGCCACGTCTTCATACTCTGACTATATGGAATTGTCAAAAATTAAAGCAGCTTCCTGATGGTTTGCGATTCATCTATTCTATAAAAGATTTGGATATGGACAAGAAATGGAAGGAAATATTGTCAGAAGGAGGAGAAGAATATTACAAAGTCCAACACATTCCTTCTGTTAAATTCGAAAAGGACTACAAATAA

Protein Analysis

900

Amino Acids

104.53

Weight (kDa)

6.68

Isoelectric Point (pI)

45.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 89 1.6e-21 Rx N-terminal domain
NB-ARC PF00931 169 - 338 8e-48 NB-ARC domain
WHD_DRP PF23559 434 - 505 2.5e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 575 - 876 5.6e-33 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1703
AccB1I GGYRCC 1 cut(s) 2142
AccI GTMKAC 1 cut(s) 1831
AciI CCGC 1 cut(s) 1545
AclI AACGTT 2 cut(s) 233, 464
AclWI GGATC 4 cut(s) 362, 2055, 2333, 2346
AcoI YGGCCR 1 cut(s) 1068
AcsI RAATTY 6 cut(s) 320, 998, 1759, 2017, 2245, 2681
AcuI CTGAAG 1 cut(s) 1344
AfaI GTAC 2 cut(s) 393, 1567
AfiI CCNNNNNNNGG 1 cut(s) 1261
AflIII ACRYGT 1 cut(s) 1606
AjiI CACGTC 1 cut(s) 2516
AjnI CCWGG 2 cut(s) 1561, 2145
AjuI GAANNNNNNNTTGG 4 cut(s) 1660, 1692, 1796, 1828
AloI GAACNNNNNNTCC 2 cut(s) 2271, 2303
Alw26I GTCTC 7 cut(s) 670, 788, 875, 1215, 1588, 2000, 2105
AlwI GGATC 4 cut(s) 362, 2055, 2333, 2346
AoxI GGCC 3 cut(s) 847, 1068, 1263
ApeKI GCWGC 5 cut(s) 251, 1097, 1319, 2037, 2557
ApoI RAATTY 6 cut(s) 320, 998, 1759, 2017, 2245, 2681
ArsI GACNNNNNNTTYG 2 cut(s) 1347, 1379
AseI ATTAAT 1 cut(s) 809
Asp700I GAANNNNTTC 1 cut(s) 780
AspS9I GGNCC 3 cut(s) 43, 847, 1264
AsuC2I CCSGG 1 cut(s) 571
AsuHPI GGTGA 3 cut(s) 376, 2071, 2288
AsuII TTCGAA 1 cut(s) 2685
AvaII GGWCC 1 cut(s) 43
AxyI CCTNAGG 1 cut(s) 1853
BaeGI GKGCMC 1 cut(s) 1908
BamHI GGATCC 1 cut(s) 2338
BanI GGYRCC 1 cut(s) 2142
BarI GAAGNNNNNNTAC 2 cut(s) 406, 438
BauI CACGAG 1 cut(s) 1818
BbsI GAAGAC 4 cut(s) 414, 846, 2172, 2510
BbvI GCAGC 5 cut(s) 263, 1084, 1306, 2049, 2569
BccI CCATC 8 cut(s) 163, 404, 568, 1021, 1912, 2201, 2312, 2561
BceAI ACGGC 1 cut(s) 1055
BciT130I CCWGG 2 cut(s) 1563, 2147
BciVI GTATCC 2 cut(s) 948, 1541
BcnI CCSGG 1 cut(s) 571
BcoDI GTCTC 7 cut(s) 670, 788, 875, 1215, 1588, 2000, 2105
BfaI CTAG 8 cut(s) 471, 723, 944, 1233, 1844, 1871, 2315, 2354
BfuI GTATCC 2 cut(s) 948, 1541
BglII AGATCT 1 cut(s) 1729
BisI GCNGC 5 cut(s) 252, 1098, 1320, 2038, 2558
BlsI GCNGC 5 cut(s) 253, 1099, 1321, 2039, 2559
Bme1390I CCNGG 3 cut(s) 571, 1563, 2147
Bme18I GGWCC 1 cut(s) 43
BmgBI CACGTC 1 cut(s) 2516
BmgT120I GGNCC 3 cut(s) 43, 847, 1264
BmiI GGNNCC 5 cut(s) 44, 848, 2144, 2340, 2506
BmrFI CCNGG 3 cut(s) 571, 1563, 2147
BmrI ACTGGG 1 cut(s) 853
BmsI GCATC 7 cut(s) 130, 279, 319, 444, 1914, 2132, 2212
BmuI ACTGGG 1 cut(s) 853
BpiI GAAGAC 4 cut(s) 414, 846, 2172, 2510
BplI GAGNNNNNCTC 2 cut(s) 2006, 2038
Bpu14I TTCGAA 1 cut(s) 2685
BpuEI CTTGAG 2 cut(s) 1813, 2387
BpuMI CCSGG 1 cut(s) 571
BsaI GGTCTC 1 cut(s) 2000
BsaJI CCNNGG 2 cut(s) 980, 1351
BsaXI ACNNNNNCTCC 4 cut(s) 1961, 1991, 2327, 2357
Bsc4I CCNNNNNNNGG 1 cut(s) 1261
Bse1I ACTGG 2 cut(s) 525, 848
Bse21I CCTNAGG 1 cut(s) 1853
Bse3DI GCAATG 3 cut(s) 897, 981, 1246
BseBI CCWGG 2 cut(s) 1563, 2147
BseDI CCNNGG 2 cut(s) 980, 1351
BseGI GGATG 7 cut(s) 579, 631, 1151, 1785, 1929, 2142, 2227
BseLI CCNNNNNNNGG 1 cut(s) 1261
BseMI GCAATG 3 cut(s) 897, 981, 1246
BseMII CTCAG 4 cut(s) 1125, 1205, 1709, 2466
BseNI ACTGG 2 cut(s) 525, 848
BseRI GAGGAG 3 cut(s) 1406, 1417, 2655
BseSI GKGCMC 1 cut(s) 1908
BseXI GCAGC 5 cut(s) 263, 1084, 1306, 2049, 2569
BshFI GGCC 3 cut(s) 849, 1070, 1265
BshNI GGYRCC 1 cut(s) 2142
BsiSI CCGG 1 cut(s) 570
BslFI GGGAC 2 cut(s) 56, 1995
BslI CCNNNNNNNGG 1 cut(s) 1261
BsmAI GTCTC 7 cut(s) 670, 788, 875, 1215, 1588, 2000, 2105
BsmFI GGGAC 2 cut(s) 56, 1995
BsmI GAATGC 1 cut(s) 935
BsnI GGCC 3 cut(s) 849, 1070, 1265
Bso31I GGTCTC 1 cut(s) 2000
Bsp119I TTCGAA 1 cut(s) 2685
Bsp1286I GDGCHC 1 cut(s) 1908
Bsp143I GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
Bsp19I CCATGG 1 cut(s) 1351
BspACI CCGC 1 cut(s) 1545
BspANI GGCC 3 cut(s) 849, 1070, 1265
BspCNI CTCAG 4 cut(s) 1126, 1206, 1710, 2467
BspHI TCATGA 1 cut(s) 1114
BspLI GGNNCC 5 cut(s) 44, 848, 2144, 2340, 2506
BspPI GGATC 4 cut(s) 362, 2055, 2333, 2346
BspT104I TTCGAA 1 cut(s) 2685
BspT107I GGYRCC 1 cut(s) 2142
BspTNI GGTCTC 1 cut(s) 2000
BsrDI GCAATG 3 cut(s) 897, 981, 1246
BsrI ACTGG 2 cut(s) 525, 848
BssECI CCNNGG 2 cut(s) 980, 1351
BssMI GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
BssSI CACGAG 1 cut(s) 1818
BssT1I CCWWGG 2 cut(s) 980, 1351
Bst2BI CACGAG 1 cut(s) 1818
Bst2UI CCWGG 2 cut(s) 1563, 2147
Bst4CI ACNGT 4 cut(s) 1181, 1190, 1986, 2432
Bst6I CTCTTC 5 cut(s) 183, 1218, 1500, 2405, 2478
BstBI TTCGAA 1 cut(s) 2685
BstDSI CCRYGG 1 cut(s) 1351
BstEII GGTNACC 1 cut(s) 565
BstF5I GGATG 7 cut(s) 579, 631, 1151, 1785, 1929, 2142, 2227
BstKTI GATC 9 cut(s) 88, 228, 357, 705, 1282, 1732, 1866, 2050, 2341
BstMAI GTCTC 7 cut(s) 670, 788, 875, 1215, 1588, 2000, 2105
BstMBI GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
BstNI CCWGG 2 cut(s) 1563, 2147
BstNSI RCATGY 2 cut(s) 379, 1610
BstPI GGTNACC 1 cut(s) 565
BstSCI CCNGG 3 cut(s) 569, 1561, 2145
BstSLI GKGCMC 1 cut(s) 1908
BstV1I GCAGC 5 cut(s) 263, 1084, 1306, 2049, 2569
BstV2I GAAGAC 4 cut(s) 414, 846, 2172, 2510
BstX2I RGATCY 4 cut(s) 354, 1729, 2047, 2338
BstYI RGATCY 4 cut(s) 354, 1729, 2047, 2338
Bsu36I CCTNAGG 1 cut(s) 1853
BsuI GTATCC 2 cut(s) 948, 1541
BsuRI GGCC 3 cut(s) 849, 1070, 1265
BtgI CCRYGG 1 cut(s) 1351
BtrI CACGTC 1 cut(s) 2516
BtsCI GGATG 7 cut(s) 579, 631, 1151, 1785, 1929, 2142, 2227
BtsIMutI CAGTG 1 cut(s) 1180
CciI TCATGA 1 cut(s) 1114
Cfr13I GGNCC 3 cut(s) 43, 847, 1264
CseI GACGC 1 cut(s) 315
Csp6I GTAC 2 cut(s) 392, 1566
CviQI GTAC 2 cut(s) 392, 1566
DpnI GATC 9 cut(s) 87, 227, 356, 704, 1281, 1731, 1865, 2049, 2340
DpnII GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
DraI TTTAAA 2 cut(s) 922, 2191
EaeI YGGCCR 1 cut(s) 1068
Eam1104I CTCTTC 5 cut(s) 183, 1218, 1500, 2405, 2478
EarI CTCTTC 5 cut(s) 183, 1218, 1500, 2405, 2478
Eco130I CCWWGG 2 cut(s) 980, 1351
Eco31I GGTCTC 1 cut(s) 2000
Eco47I GGWCC 1 cut(s) 43
Eco57I CTGAAG 1 cut(s) 1344
Eco81I CCTNAGG 1 cut(s) 1853
Eco91I GGTNACC 1 cut(s) 565
EcoO109I RGGNCCY 1 cut(s) 847
EcoO65I GGTNACC 1 cut(s) 565
EcoRI GAATTC 1 cut(s) 998
EcoRII CCWGG 2 cut(s) 1561, 2145
EcoT14I CCWWGG 2 cut(s) 980, 1351
EcoT22I ATGCAT 3 cut(s) 381, 897, 1929
ErhI CCWWGG 2 cut(s) 980, 1351
FalI AAGNNNNNCTT 2 cut(s) 1235, 1267
FaqI GGGAC 2 cut(s) 56, 1995
FauNDI CATATG 1 cut(s) 827
FblI GTMKAC 1 cut(s) 1831
Fnu4HI GCNGC 5 cut(s) 252, 1098, 1320, 2038, 2558
FokI GGATG 7 cut(s) 586, 638, 1158, 1772, 1936, 2149, 2234
Fsp4HI GCNGC 5 cut(s) 252, 1098, 1320, 2038, 2558
FspBI CTAG 8 cut(s) 471, 723, 944, 1233, 1844, 1871, 2315, 2354
GluI GCNGC 5 cut(s) 252, 1098, 1320, 2038, 2558
HaeIII GGCC 3 cut(s) 849, 1070, 1265
HapII CCGG 1 cut(s) 570
HgaI GACGC 1 cut(s) 315
HincII GTYRAC 1 cut(s) 916
HindII GTYRAC 1 cut(s) 916
HindIII AAGCTT 3 cut(s) 35, 1452, 1696
HinfI GANTC 9 cut(s) 367, 648, 712, 992, 2074, 2113, 2211, 2350, 2577
HpaII CCGG 1 cut(s) 570
HphI GGTGA 3 cut(s) 376, 2071, 2288
Hpy166II GTNNAC 5 cut(s) 678, 916, 1198, 1832, 1999
Hpy8I GTNNAC 5 cut(s) 678, 916, 1198, 1832, 1999
Hpy99I CGWCG 1 cut(s) 1966
HpyCH4III ACNGT 4 cut(s) 1181, 1190, 1986, 2432
HpyCH4IV ACGT 4 cut(s) 233, 464, 1961, 2515
HpySE526I ACGT 4 cut(s) 233, 464, 1961, 2515
Kzo9I GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
LmnI GCTCC 1 cut(s) 2510
Lsp1109I GCAGC 5 cut(s) 263, 1084, 1306, 2049, 2569
LweI GCATC 7 cut(s) 130, 279, 319, 444, 1914, 2132, 2212
MaeI CTAG 8 cut(s) 471, 723, 944, 1233, 1844, 1871, 2315, 2354
MaeII ACGT 4 cut(s) 233, 464, 1961, 2515
MaeIII GTNAC 7 cut(s) 476, 565, 1175, 1181, 1432, 2268, 2343
MalI GATC 9 cut(s) 87, 227, 356, 704, 1281, 1731, 1865, 2049, 2340
MboI GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
MfeI CAATTG 4 cut(s) 12, 1909, 2240, 2444
MflI RGATCY 4 cut(s) 354, 1729, 2047, 2338
MhlI GDGCHC 1 cut(s) 1908
MlyI GAGTC 3 cut(s) 642, 2068, 2107
MmeI TCCRAC 7 cut(s) 480, 505, 932, 1354, 1565, 1658, 2686
Mph1103I ATGCAT 3 cut(s) 381, 897, 1929
MroXI GAANNNNTTC 1 cut(s) 780
MslI CAYNNNNRTG 5 cut(s) 305, 624, 658, 1350, 1464
MspI CCGG 1 cut(s) 570
MspR9I CCNGG 3 cut(s) 571, 1563, 2147
MunI CAATTG 4 cut(s) 12, 1909, 2240, 2444
Mva1269I GAATGC 1 cut(s) 935
MvaI CCWGG 2 cut(s) 1563, 2147
NciI CCSGG 1 cut(s) 571
NcoI CCATGG 1 cut(s) 1351
NdeI CATATG 1 cut(s) 827
NdeII GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
NlaIV GGNNCC 5 cut(s) 44, 848, 2144, 2340, 2506
NmuCI GTSAC 1 cut(s) 1175
NsiI ATGCAT 3 cut(s) 381, 897, 1929
NspI RCATGY 2 cut(s) 379, 1610
NspV TTCGAA 1 cut(s) 2685
PagI TCATGA 1 cut(s) 1114
PciI ACATGT 1 cut(s) 1606
PcsI WCGNNNNNNNCGW 1 cut(s) 1825
PctI GAATGC 1 cut(s) 935
PdmI GAANNNNTTC 1 cut(s) 780
PfeI GAWTC 6 cut(s) 367, 712, 992, 2211, 2350, 2577
PkrI GCNGC 5 cut(s) 253, 1099, 1321, 2039, 2559
PleI GAGTC 3 cut(s) 642, 2068, 2107
PpsI GAGTC 3 cut(s) 642, 2068, 2107
PscI ACATGT 1 cut(s) 1606
PshBI ATTAAT 1 cut(s) 809
PsiI TTATAA 1 cut(s) 1703
Psp1406I AACGTT 2 cut(s) 233, 464
Psp6I CCWGG 2 cut(s) 1561, 2145
PspEI GGTNACC 1 cut(s) 565
PspGI CCWGG 2 cut(s) 1561, 2145
PspN4I GGNNCC 5 cut(s) 44, 848, 2144, 2340, 2506
PspPI GGNCC 3 cut(s) 43, 847, 1264
PsrI GAACNNNNNNTAC 2 cut(s) 1174, 1206
PsuI RGATCY 4 cut(s) 354, 1729, 2047, 2338
RsaI GTAC 2 cut(s) 393, 1567
RsaNI GTAC 2 cut(s) 392, 1566
RseI CAYNNNNRTG 5 cut(s) 305, 624, 658, 1350, 1464
SatI GCNGC 5 cut(s) 252, 1098, 1320, 2038, 2558
Sau3AI GATC 9 cut(s) 85, 225, 354, 702, 1279, 1729, 1863, 2047, 2338
Sau96I GGNCC 3 cut(s) 43, 847, 1264
SchI GAGTC 3 cut(s) 642, 2068, 2107
ScrFI CCNGG 3 cut(s) 571, 1563, 2147
SduI GDGCHC 1 cut(s) 1908
SfaNI GCATC 7 cut(s) 130, 279, 319, 444, 1914, 2132, 2212
SfuI TTCGAA 1 cut(s) 2685
SinI GGWCC 1 cut(s) 43
SmiMI CAYNNNNRTG 5 cut(s) 305, 624, 658, 1350, 1464
SmlI CTYRAG 2 cut(s) 1792, 2366
SmoI CTYRAG 2 cut(s) 1792, 2366
SsiI CCGC 1 cut(s) 1545
SspI AATATT 6 cut(s) 864, 1049, 1141, 1332, 2628, 2651
SspMI CTAG 8 cut(s) 471, 723, 944, 1233, 1844, 1871, 2315, 2354
StyD4I CCNGG 3 cut(s) 569, 1561, 2145
StyI CCWWGG 2 cut(s) 980, 1351
TaaI ACNGT 4 cut(s) 1181, 1190, 1986, 2432
TaiI ACGT 4 cut(s) 236, 467, 1964, 2518
TaqI TCGA 8 cut(s) 6, 88, 228, 1342, 1366, 1964, 2395, 2685
TaqII GACCGA 1 cut(s) 60
TatI WGTACW 1 cut(s) 391
TfiI GAWTC 6 cut(s) 367, 712, 992, 2211, 2350, 2577
TscAI CASTG 1 cut(s) 1180
TseFI GTSAC 1 cut(s) 1175
TseI GCWGC 5 cut(s) 251, 1097, 1319, 2037, 2557
Tsp45I GTSAC 1 cut(s) 1175
TspGWI ACGGA 2 cut(s) 230, 2331
TspRI CASTG 1 cut(s) 1180
VpaK11BI GGWCC 1 cut(s) 43
VspI ATTAAT 1 cut(s) 809
XapI RAATTY 6 cut(s) 320, 998, 1759, 2017, 2245, 2681
XbaI TCTAGA 5 cut(s) 722, 943, 1870, 2314, 2353
XceI RCATGY 2 cut(s) 379, 1610
XcmI CCANNNNNNNNNTGG 1 cut(s) 1915
XmiI GTMKAC 1 cut(s) 1831
XmnI GAANNNNTTC 1 cut(s) 780
XspI CTAG 8 cut(s) 471, 723, 944, 1233, 1844, 1871, 2315, 2354
Zsp2I ATGCAT 3 cut(s) 381, 897, 1929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.