Rw1G016280

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
36166056 .. 36169604
3549 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G016280.1

Sequence Viewer

Length: 2988 bp
ATGGCTGAAGGTGTTGTTACTGTTGTGGCTCAAGGGATCAAGCCCCTGGGAGATTTCATCATTCAGCAAGCGAAGTTCTTGAGTGGAGTAAGCTACCAAGTTGAGCTGGCACAAGTTGAACTTCAATTGATCCGGGGCTTCCTCAGAGATGCAGACGCAAGACAAGGAGACGAAGAAGTAGTACGCATTTGGGTTAAATTGATTAGAGATGCTGCTTATGACTTGGAGGATGTTATTGAATCTTTTGCCTTGAAAGTGGCTTCCAGGAGGAGAGGAGGTACGGTGAAGATTTCTCTCAAAAGGTTTGCCAGCATCTTTAATGAAGGAGTTAATCGATACAAGATTGGTTCCGAAATTGAGGATATTATGACCAAACTTTCTCATCTGAGGTCGAGTTTGCAAAGTTATAACATCAGGCAAATAAGTGGGGGTGATGGTGTCGCTACTTCTTTTAAGAGGCAACTAGACCGGCGGCTAACATATGCTCATGAAGTTGAAAGTCATACTGTTGGCTTAGAGGAAAACACAGATATACTGGTGAAGGAGTTGGTGGGAAAAGGAAAGCGTCACCGTGTTGTTTCTATTTGGGGGATGGGCGGCTCTGGAAAAACCACTCTTGCAAAACAGGTTTTTCTTCAAAATGAAGTTAAGCGTCATTTTGGTTGTTTTGCTTGGGTCTGTATATCTCAACAATGGGAAGGAAAGGTTGTATTGGAAGAGATTTTAATTAAACTCACTTCCCCAACAACAGAGAAAAGGAAAGAAATTTCCAAAATGAAAAAGGATGAAATAGCGAGGGAGGTCTGTAGTATCCAACGAGAAAAGAGATGTCTGGTCGTCCTTGATGACATATGGACTCAAGAGGCTTGGCATTCGATAAAAGCTGGATTCCCAATCAATGAGGAAACAGAGAGCCGGATATTACTCACTACTCGCAAGAAAGAAGTTGCCTTGCTTGCATCCAAAAATGATCATCTCCACCAACCTCTACCACTAGATGACAATCAAAGCTGGGAACTGTTTGAAAACATAGCGATGTGTGGAAGCGACAAAACAGACTTGGAAATTTATGCAAAGAAGAGAGAATTAGGAAAGAAGATGCTTGTACATTGTTCAGGTTTACCATTAGCCATCAATGTGCTCGCTGGTCTTCTTAGTAGACGAGAGACGGTTGATGAGTGGGACACAATACTTAGAAATGTTGATGTATACATAATGAGAGGCACAAATGTCCTTGAAAGAGAACAGACAAGTCAGGAGTGTGGTGTTTCAGGTGTCTTGGCTTTGAGTTATGATGACTTACCATCTCACTTAAAACTATGCTTTTTGTATTTAGCCCAATTTCCTGAGGATCATGAGATACGGGTAAAAAGACTTGTTCAATTATGGATTGCAGAAGGGTTTATAACTTCAACGTCAGAAATGCATGTTTCAGTGGAAATTTTGGAAGAATTGTCATATAGTTGCCTAGTTGAATTGGTGGAAAGATCTATGGTTCAAGTTGTAGAATATGGTTTAAGTGGGCAGGTGAAAACTTGTCGTCTCCATGATTTTATGCGAGACTTGTGCTTGCAAAAGGCAGAAGAGGAGAATTTTCTCCGAATTATTAACTTTTCTGCGGGATTGGTATCTAAGACAGCACTAATTGGCAAGGTTCGAAGACTTGCCCTCTATTTGGACAAAAATGTAAAATATGATTTTTGTATAGATGGAAGAGATGAGCACATTAGGTCTCTATTATACTTTACCCCAAAAGGGTTTGACCAAAAGTGGAACAAAAAAGTAATGCGATCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTTAAGTTTGAAAATATAGAGAGAGAATTTCAGTTACCGAAAACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTGAAGCATAGTGCATATCGTGGGTTGCCATCATCTGTATCTAATCTGGTACTTTTGCAAACTCTAGATCTGCGGTATAATTATTTATATGAAGGATCTTGTTTTGGTCGGGAGTGGGCGACCAGAATTAGAAATGTGTTTTGGAATATGGAGCAACTGAGGCATTTATATTTACCTTGGCGTCACTATATAAGTGAACAGAAACTCTCATTTGCCAGGCTGTGCAAATTGCAGACGTTGGGTGATCTTCCAATTGAGAAATGTGATTTGAATGATCTTGTTCAGTTAACCAATCTGAAGAAAATATCCATAATTGTATCACAGCCTAGTCACTTGGAAAAGTTCAAGAACATGTTGATATCACGAAATGTAACATACGAGCATCTTCGATCGCTATCTTTGAAGCTCAACCAAGATGATAATGAGGATATAGCACGAGATATAGTATTAAGGTGTCCTCATATATACAAGCTGCGACTGGTTGGGAAAATGACGGAGTTTCCAGTAGAGCTCCTGGGCTATCCAAACCTCACCAAGATAACGTTGGTTAGTACAGAACTGAGGTGTGACCAGATAGAAATACTGAAGATGCTGCCCAATTTAAGGGTGCTTTACCTGGGTAGTAATGCTTTCAATACAAGAACAATGGTTTTCTCCCCAGGAGGTTTTCCTCATCTGGAATTTCTTACCCTTAGTGCTTTGTTTATGTTGAACGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCATATTGAATGGTGCCTACAATTATGGGAAGTACCAGATGGGCTTCAGCATACTACTACCCTCAAGGAATTAACAATCAACGTGATGACCAGTAGATTCTGCAGTAGGGTTGGGGAAGGAGGAGAGGATTTCTACAAAATTAAACATGTGCCTTCTATTATAATCACAAATATTCAACCCGACTACAAGAAAGACAAGGAGCCAGAAATGGAGGAAGCAGCAGGTGCATCTCGAGTAGTTGCTAATGACTATGAGGAATCAACTATGGACGCTCCTCCGCCTCCTGAAGAAAAAACAGAGGAAATACAAGCTGCATCCACTCCTTAA

Protein Analysis

995

Amino Acids

114.47

Weight (kDa)

7.11

Isoelectric Point (pI)

49.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 12 - 91 1.6e-19 Rx N-terminal domain
NB-ARC PF00931 174 - 348 2.1e-39 NB-ARC domain
WHD_DRP PF23559 448 - 523 4.6e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 593 - 918 2.1e-34 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 408, 1406, 2822
AarI CACCTGC 2 cut(s) 1516, 2873
Acc36I ACCTGC 2 cut(s) 1516, 2873
AccB1I GGYRCC 1 cut(s) 2673
AccI GTMKAC 2 cut(s) 1159, 1209
AciI CCGC 5 cut(s) 472, 597, 1619, 1975, 2939
AclI AACGTT 1 cut(s) 2444
AclWI GGATC 4 cut(s) 44, 124, 1359, 2005
AcsI RAATTY 6 cut(s) 765, 1065, 1440, 1591, 1850, 2582
AcuI CTGAAG 7 cut(s) 27, 1925, 2219, 2507, 2636, 2690, 2967
AcyI GRCGYC 1 cut(s) 2083
AfaI GTAC 6 cut(s) 183, 280, 1107, 1953, 2455, 2694
AfiI CCNNNNNNNGG 3 cut(s) 1675, 1755, 2505
AflII CTTAAG 1 cut(s) 1826
AflIII ACRYGT 2 cut(s) 2253, 2806
AjnI CCWGG 6 cut(s) 45, 263, 2117, 2415, 2517, 2560
AjuI GAANNNNNNNTTGG 2 cut(s) 2026, 2058
AluBI AGCT 8 cut(s) 93, 106, 884, 1011, 2308, 2374, 2413, 2972
AluI AGCT 8 cut(s) 93, 106, 884, 1011, 2308, 2374, 2413, 2972
Alw21I GWGCWC 3 cut(s) 1143, 1725, 2415
Alw26I GTCTC 5 cut(s) 162, 1160, 1547, 1554, 1737
AlwI GGATC 4 cut(s) 44, 124, 1359, 2005
Ama87I CYCGRG 1 cut(s) 2892
ApeKI GCWGC 5 cut(s) 212, 2374, 2494, 2879, 2972
ApoI RAATTY 6 cut(s) 765, 1065, 1440, 1591, 1850, 2582
AsuC2I CCSGG 1 cut(s) 134
AsuHPI GGTGA 7 cut(s) 295, 443, 550, 560, 1540, 2156, 2425
AsuII TTCGAA 1 cut(s) 1657
AvaI CYCGRG 1 cut(s) 2892
AxyI CCTNAGG 1 cut(s) 1347
BanI GGYRCC 1 cut(s) 2673
BanII GRGCYC 1 cut(s) 2415
BarI GAAGNNNNNNTAC 2 cut(s) 165, 197
BauI CACGAG 1 cut(s) 2337
BbsI GAAGAC 3 cut(s) 1142, 1666, 2642
Bbv12I GWGCWC 3 cut(s) 1143, 1725, 2415
BbvI GCAGC 5 cut(s) 199, 2361, 2481, 2891, 2959
BccI CCATC 7 cut(s) 428, 586, 1139, 1312, 1703, 1939, 2693
BcgI CGANNNNNNTGC 2 cut(s) 1548, 1582
BciT130I CCWGG 6 cut(s) 47, 265, 2119, 2417, 2519, 2562
BciVI GTATCC 1 cut(s) 821
BclI TGATCA 1 cut(s) 970
BcnI CCSGG 1 cut(s) 134
BcoDI GTCTC 5 cut(s) 162, 1160, 1547, 1554, 1737
BfaI CTAG 7 cut(s) 464, 995, 1469, 1880, 1967, 2229, 2646
BfmI CTRYAG 2 cut(s) 805, 2761
BfrI CTTAAG 1 cut(s) 1826
BfuAI ACCTGC 2 cut(s) 1516, 2873
BfuI GTATCC 1 cut(s) 821
BglII AGATCT 2 cut(s) 1487, 1969
BisI GCNGC 7 cut(s) 213, 473, 598, 2375, 2495, 2880, 2973
BlsI GCNGC 7 cut(s) 214, 474, 599, 2376, 2496, 2881, 2974
Bme1390I CCNGG 7 cut(s) 47, 134, 265, 2119, 2417, 2519, 2562
BmeT110I CYCGRG 1 cut(s) 2892
BmiI GGNNCC 3 cut(s) 349, 2675, 2862
BmrFI CCNGG 7 cut(s) 47, 134, 265, 2119, 2417, 2519, 2562
BmsI GCATC 9 cut(s) 139, 199, 321, 968, 1089, 2293, 2481, 2897, 2984
BpiI GAAGAC 3 cut(s) 1142, 1666, 2642
Bpu14I TTCGAA 1 cut(s) 1657
BpuEI CTTGAG 5 cut(s) 15, 100, 843, 1909, 2708
BpuMI CCSGG 1 cut(s) 134
Bsa29I ATCGAT 1 cut(s) 334
BsaBI GATNNNNATC 3 cut(s) 1002, 1627, 2296
BsaHI GRCGYC 1 cut(s) 2083
BsaI GGTCTC 1 cut(s) 1737
BsaJI CCNNGG 7 cut(s) 45, 46, 133, 2078, 2416, 2518, 2560
BsaXI ACNNNNNCTCC 4 cut(s) 262, 267, 292, 297
Bsc4I CCNNNNNNNGG 3 cut(s) 1675, 1755, 2505
Bse118I RCCGGY 1 cut(s) 468
Bse1I ACTGG 4 cut(s) 540, 2385, 2405, 2751
Bse21I CCTNAGG 1 cut(s) 1347
Bse8I GATNNNNATC 3 cut(s) 1002, 1627, 2296
BseBI CCWGG 6 cut(s) 47, 265, 2119, 2417, 2519, 2562
BseCI ATCGAT 1 cut(s) 334
BseDI CCNNGG 7 cut(s) 45, 46, 133, 2078, 2416, 2518, 2560
BseGI GGATG 5 cut(s) 235, 597, 790, 959, 2975
BseJI GATNNNNATC 3 cut(s) 1002, 1627, 2296
BseLI CCNNNNNNNGG 3 cut(s) 1675, 1755, 2505
BseMII CTCAG 6 cut(s) 157, 377, 1338, 1889, 2051, 2453
BseNI ACTGG 4 cut(s) 540, 2385, 2405, 2751
BseRI GAGGAG 5 cut(s) 283, 288, 1601, 2796, 2925
BseXI GCAGC 5 cut(s) 199, 2361, 2481, 2891, 2959
BseYI CCCAGC 1 cut(s) 1011
Bsh1285I CGRYCG 1 cut(s) 2294
BshNI GGYRCC 1 cut(s) 2673
BshVI ATCGAT 1 cut(s) 334
BsiEI CGRYCG 1 cut(s) 2294
BsiHKAI GWGCWC 3 cut(s) 1143, 1725, 2415
BsiHKCI CYCGRG 1 cut(s) 2892
BsiSI CCGG 3 cut(s) 133, 469, 916
BslFI GGGAC 1 cut(s) 1196
BslI CCNNNNNNNGG 3 cut(s) 1675, 1755, 2505
BsmAI GTCTC 5 cut(s) 162, 1160, 1547, 1554, 1737
BsmBI CGTCTC 3 cut(s) 162, 1160, 1547
BsmFI GGGAC 1 cut(s) 1196
BsmI GAATGC 1 cut(s) 871
Bso31I GGTCTC 1 cut(s) 1737
BsoBI CYCGRG 1 cut(s) 2892
Bsp119I TTCGAA 1 cut(s) 1657
Bsp1286I GDGCHC 3 cut(s) 1143, 1725, 2415
Bsp1407I TGTACA 1 cut(s) 1105
BspACI CCGC 5 cut(s) 472, 597, 1619, 1975, 2939
BspCNI CTCAG 6 cut(s) 156, 378, 1339, 1890, 2052, 2454
BspDI ATCGAT 1 cut(s) 334
BspHI TCATGA 2 cut(s) 487, 1354
BspLI GGNNCC 3 cut(s) 349, 2675, 2862
BspMAI CTGCAG 1 cut(s) 2765
BspMI ACCTGC 2 cut(s) 1516, 2873
BspPI GGATC 4 cut(s) 44, 124, 1359, 2005
BspT104I TTCGAA 1 cut(s) 1657
BspT107I GGYRCC 1 cut(s) 2673
BspTI CTTAAG 1 cut(s) 1826
BspTNI GGTCTC 1 cut(s) 1737
BsrFI RCCGGY 1 cut(s) 468
BsrGI TGTACA 1 cut(s) 1105
BsrI ACTGG 4 cut(s) 540, 2385, 2405, 2751
BssAI RCCGGY 1 cut(s) 468
BssECI CCNNGG 7 cut(s) 45, 46, 133, 2078, 2416, 2518, 2560
BssNAI GTATAC 1 cut(s) 1210
BssNI GRCGYC 1 cut(s) 2083
BssSI CACGAG 1 cut(s) 2337
BssT1I CCWWGG 1 cut(s) 2078
Bst1107I GTATAC 1 cut(s) 1210
Bst2BI CACGAG 1 cut(s) 2337
Bst2UI CCWGG 6 cut(s) 47, 265, 2119, 2417, 2519, 2562
Bst4CI ACNGT 6 cut(s) 22, 283, 508, 572, 1020, 1171
Bst6I CTCTTC 4 cut(s) 711, 1073, 1578, 1708
BstACI GRCGYC 1 cut(s) 2083
BstAFI CTTAAG 1 cut(s) 1826
BstAPI GCANNNNNTGC 1 cut(s) 2885
BstAUI TGTACA 1 cut(s) 1105
BstBI TTCGAA 1 cut(s) 1657
BstC8I GCNNGC 6 cut(s) 69, 108, 310, 957, 1143, 1571
BstF5I GGATG 5 cut(s) 235, 597, 790, 959, 2975
BstMAI GTCTC 5 cut(s) 162, 1160, 1547, 1554, 1737
BstMCI CGRYCG 1 cut(s) 2294
BstMWI GCNNNNNNNGC 3 cut(s) 956, 2062, 2885
BstNI CCWGG 6 cut(s) 47, 265, 2119, 2417, 2519, 2562
BstNSI RCATGY 3 cut(s) 1430, 2257, 2810
BstSCI CCNGG 7 cut(s) 45, 132, 263, 2117, 2415, 2517, 2560
BstSFI CTRYAG 2 cut(s) 805, 2761
BstV1I GCAGC 5 cut(s) 199, 2361, 2481, 2891, 2959
BstV2I GAAGAC 3 cut(s) 1142, 1666, 2642
BstX2I RGATCY 3 cut(s) 1487, 1969, 1997
BstYI RGATCY 3 cut(s) 1487, 1969, 1997
BstZ17I GTATAC 1 cut(s) 1210
Bsu15I ATCGAT 1 cut(s) 334
Bsu36I CCTNAGG 1 cut(s) 1347
BsuI GTATCC 1 cut(s) 821
BsuTUI ATCGAT 1 cut(s) 334
BtgZI GCGATG 1 cut(s) 1049
BtsCI GGATG 5 cut(s) 235, 597, 790, 959, 2975
BtsIMutI CAGTG 1 cut(s) 1440
BveI ACCTGC 2 cut(s) 1516, 2873
Cac8I GCNNGC 6 cut(s) 69, 108, 310, 957, 1143, 1571
CciI TCATGA 2 cut(s) 487, 1354
Cfr10I RCCGGY 1 cut(s) 468
ClaI ATCGAT 1 cut(s) 334
CseI GACGC 5 cut(s) 164, 554, 641, 2072, 2939
Csp6I GTAC 6 cut(s) 182, 279, 1106, 1952, 2454, 2693
CviAII CATG 7 cut(s) 488, 1355, 1427, 1547, 2254, 2641, 2807
CviQI GTAC 6 cut(s) 182, 279, 1106, 1952, 2454, 2693
Eam1104I CTCTTC 4 cut(s) 711, 1073, 1578, 1708
EarI CTCTTC 4 cut(s) 711, 1073, 1578, 1708
EciI GGCGGA 1 cut(s) 2928
Ecl136II GAGCTC 1 cut(s) 2413
Eco130I CCWWGG 1 cut(s) 2078
Eco24I GRGCYC 1 cut(s) 2415
Eco31I GGTCTC 1 cut(s) 1737
Eco32I GATATC 1 cut(s) 2262
Eco53kI GAGCTC 1 cut(s) 2413
Eco57I CTGAAG 7 cut(s) 27, 1925, 2219, 2507, 2636, 2690, 2967
Eco81I CCTNAGG 1 cut(s) 1347
Eco88I CYCGRG 1 cut(s) 2892
EcoICRI GAGCTC 1 cut(s) 2413
EcoRII CCWGG 6 cut(s) 45, 263, 2117, 2415, 2517, 2560
EcoRV GATATC 1 cut(s) 2262
EcoT14I CCWWGG 1 cut(s) 2078
EcoT22I ATGCAT 1 cut(s) 1428
EcoT38I GRGCYC 1 cut(s) 2415
ErhI CCWWGG 1 cut(s) 2078
Esp3I CGTCTC 3 cut(s) 162, 1160, 1547
FaeI CATG 7 cut(s) 491, 1358, 1430, 1550, 2257, 2644, 2810
FalI AAGNNNNNCTT 2 cut(s) 105, 137
FaqI GGGAC 1 cut(s) 1196
FatI CATG 7 cut(s) 487, 1354, 1426, 1546, 2253, 2640, 2806
FauI CCCGC 1 cut(s) 1612
FauNDI CATATG 2 cut(s) 481, 851
FbaI TGATCA 1 cut(s) 970
FblI GTMKAC 2 cut(s) 1159, 1209
Fnu4HI GCNGC 7 cut(s) 213, 473, 598, 2375, 2495, 2880, 2973
FokI GGATG 5 cut(s) 242, 604, 797, 946, 2962
FriOI GRGCYC 1 cut(s) 2415
Fsp4HI GCNGC 7 cut(s) 213, 473, 598, 2375, 2495, 2880, 2973
FspBI CTAG 7 cut(s) 464, 995, 1469, 1880, 1967, 2229, 2646
GluI GCNGC 7 cut(s) 213, 473, 598, 2375, 2495, 2880, 2973
GsaI CCCAGC 1 cut(s) 1015
HapII CCGG 3 cut(s) 133, 469, 916
HgaI GACGC 5 cut(s) 164, 554, 641, 2072, 2939
Hin1I GRCGYC 1 cut(s) 2083
Hin1II CATG 7 cut(s) 491, 1358, 1430, 1550, 2257, 2644, 2810
HincII GTYRAC 1 cut(s) 2190
HindII GTYRAC 1 cut(s) 2190
HinfI GANTC 7 cut(s) 239, 856, 888, 1876, 1900, 2757, 2918
HpaI GTTAAC 1 cut(s) 2190
HpaII CCGG 3 cut(s) 133, 469, 916
HphI GGTGA 7 cut(s) 295, 443, 550, 560, 1540, 2156, 2425
Hpy166II GTNNAC 6 cut(s) 1121, 1160, 1210, 1885, 2099, 2190
Hpy188I TCNGA 9 cut(s) 146, 352, 387, 1420, 1601, 1899, 1905, 2199, 2655
Hpy8I GTNNAC 6 cut(s) 1121, 1160, 1210, 1885, 2099, 2190
HpyAV CCTTC 7 cut(s) 317, 535, 692, 1391, 1988, 2771, 2823
HpyCH4III ACNGT 6 cut(s) 22, 283, 508, 572, 1020, 1171
HpyCH4IV ACGT 4 cut(s) 1415, 2138, 2444, 2742
HpyF10VI GCNNNNNNNGC 3 cut(s) 956, 2062, 2885
HpySE526I ACGT 4 cut(s) 1415, 2138, 2444, 2742
Hsp92I GRCGYC 1 cut(s) 2083
Hsp92II CATG 7 cut(s) 491, 1358, 1430, 1550, 2257, 2644, 2810
Ksp22I TGATCA 1 cut(s) 970
KspAI GTTAAC 1 cut(s) 2190
LmnI GCTCC 4 cut(s) 2053, 2418, 2860, 2938
Lsp1109I GCAGC 5 cut(s) 199, 2361, 2481, 2891, 2959
LweI GCATC 9 cut(s) 139, 199, 321, 968, 1089, 2293, 2481, 2897, 2984
MaeI CTAG 7 cut(s) 464, 995, 1469, 1880, 1967, 2229, 2646
MaeII ACGT 4 cut(s) 1415, 2138, 2444, 2742
MaeIII GTNAC 7 cut(s) 16, 566, 1857, 2084, 2231, 2272, 2468
MfeI CAATTG 2 cut(s) 125, 2154
MflI RGATCY 3 cut(s) 1487, 1969, 1997
MhlI GDGCHC 3 cut(s) 1143, 1725, 2415
MlyI GAGTC 2 cut(s) 850, 1909
MmeI TCCRAC 1 cut(s) 838
Mph1103I ATGCAT 1 cut(s) 1428
MslI CAYNNNNRTG 2 cut(s) 1034, 1136
MspCI CTTAAG 1 cut(s) 1826
MspI CCGG 3 cut(s) 133, 469, 916
MspR9I CCNGG 7 cut(s) 47, 134, 265, 2119, 2417, 2519, 2562
MunI CAATTG 2 cut(s) 125, 2154
Mva1269I GAATGC 1 cut(s) 871
MvaI CCWGG 6 cut(s) 47, 265, 2119, 2417, 2519, 2562
MwoI GCNNNNNNNGC 3 cut(s) 956, 2062, 2885
NciI CCSGG 1 cut(s) 134
NdeI CATATG 2 cut(s) 481, 851
NlaIII CATG 7 cut(s) 491, 1358, 1430, 1550, 2257, 2644, 2810
NlaIV GGNNCC 3 cut(s) 349, 2675, 2862
NmuCI GTSAC 4 cut(s) 566, 2084, 2231, 2468
NsiI ATGCAT 1 cut(s) 1428
NspI RCATGY 3 cut(s) 1430, 2257, 2810
NspV TTCGAA 1 cut(s) 1657
PacI TTAATTAA 1 cut(s) 729
PaeR7I CTCGAG 1 cut(s) 2892
PagI TCATGA 2 cut(s) 487, 1354
PaqCI CACCTGC 2 cut(s) 1516, 2873
PasI CCCWGGG 1 cut(s) 46
PciI ACATGT 2 cut(s) 2253, 2806
PctI GAATGC 1 cut(s) 871
PfeI GAWTC 5 cut(s) 239, 888, 1876, 2757, 2918
PfoI TCCNGGA 1 cut(s) 263
PkrI GCNGC 7 cut(s) 214, 474, 599, 2376, 2496, 2881, 2974
Ple19I CGATCG 1 cut(s) 2294
PleI GAGTC 2 cut(s) 850, 1908
PpsI GAGTC 2 cut(s) 850, 1908
PscI ACATGT 2 cut(s) 2253, 2806
PsiI TTATAA 3 cut(s) 408, 1406, 2822
Psp124BI GAGCTC 1 cut(s) 2415
Psp1406I AACGTT 1 cut(s) 2444
Psp6I CCWGG 6 cut(s) 45, 263, 2117, 2415, 2517, 2560
PspFI CCCAGC 1 cut(s) 1011
PspGI CCWGG 6 cut(s) 45, 263, 2117, 2415, 2517, 2560
PspN4I GGNNCC 3 cut(s) 349, 2675, 2862
PstI CTGCAG 1 cut(s) 2765
PsuI RGATCY 3 cut(s) 1487, 1969, 1997
PvuI CGATCG 1 cut(s) 2294
RsaI GTAC 6 cut(s) 183, 280, 1107, 1953, 2455, 2694
RsaNI GTAC 6 cut(s) 182, 279, 1106, 1952, 2454, 2693
RseI CAYNNNNRTG 2 cut(s) 1034, 1136
SacI GAGCTC 1 cut(s) 2415
SatI GCNGC 7 cut(s) 213, 473, 598, 2375, 2495, 2880, 2973
SchI GAGTC 2 cut(s) 850, 1909
ScrFI CCNGG 7 cut(s) 47, 134, 265, 2119, 2417, 2519, 2562
SduI GDGCHC 3 cut(s) 1143, 1725, 2415
SfaNI GCATC 9 cut(s) 139, 199, 321, 968, 1089, 2293, 2481, 2897, 2984
SfcI CTRYAG 2 cut(s) 805, 2761
Sfr274I CTCGAG 1 cut(s) 2892
SfuI TTCGAA 1 cut(s) 1657
SlaI CTCGAG 1 cut(s) 2892
SmiMI CAYNNNNRTG 2 cut(s) 1034, 1136
SmlI CTYRAG 7 cut(s) 30, 79, 858, 1826, 1888, 2723, 2892
SmoI CTYRAG 7 cut(s) 30, 79, 858, 1826, 1888, 2723, 2892
SsiI CCGC 5 cut(s) 472, 597, 1619, 1975, 2939
SspI AATATT 1 cut(s) 2833
SspMI CTAG 7 cut(s) 464, 995, 1469, 1880, 1967, 2229, 2646
SstI GAGCTC 1 cut(s) 2415
StyD4I CCNGG 7 cut(s) 45, 132, 263, 2117, 2415, 2517, 2560
StyI CCWWGG 1 cut(s) 2078
TaaI ACNGT 6 cut(s) 22, 283, 508, 572, 1020, 1171
TaiI ACGT 4 cut(s) 1418, 2141, 2447, 2745
TaqI TCGA 6 cut(s) 334, 392, 875, 1657, 2290, 2893
TatI WGTACW 2 cut(s) 1105, 2453
TauI GCSGC 2 cut(s) 475, 600
TfiI GAWTC 5 cut(s) 239, 888, 1876, 2757, 2918
TscAI CASTG 1 cut(s) 1440
TseFI GTSAC 4 cut(s) 566, 2084, 2231, 2468
TseI GCWGC 5 cut(s) 212, 2374, 2494, 2879, 2972
Tsp45I GTSAC 4 cut(s) 566, 2084, 2231, 2468
TspDTI ATGAA 7 cut(s) 46, 336, 504, 657, 791, 801, 2007
TspGWI ACGGA 1 cut(s) 2411
TspRI CASTG 1 cut(s) 1440
Vha464I CTTAAG 1 cut(s) 1826
XapI RAATTY 6 cut(s) 765, 1065, 1440, 1591, 1850, 2582
XbaI TCTAGA 1 cut(s) 1966
XceI RCATGY 3 cut(s) 1430, 2257, 2810
XcmI CCANNNNNNNNNTGG 1 cut(s) 2443
XhoI CTCGAG 1 cut(s) 2892
XmiI GTMKAC 2 cut(s) 1159, 1209
XspI CTAG 7 cut(s) 464, 995, 1469, 1880, 1967, 2229, 2646
Zsp2I ATGCAT 1 cut(s) 1428
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.