Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001582.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

42890 .. 46181

Gene Structure 3292 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001582.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2859 bp

atggctgaggctgttgtttcttttctcgtggaaagagttggtgacttcatcattcaagaaggcagatccttgtccggagttcgcgatcaagttgagcgtgcacatacagacctagtgttcatcaagggcttcctcaaagatgcagacgcaaagcgacgagatgatgaggctatacgcatttttgttgccaaaattagagatgctgcttatgatttggaggatgtcattgaagcttttgtcttgaaggtggattccaagaggaaaggaggtctgaagaatgttttgaagaggttggggtgcatcttcattgaaggagttcgtcgtcacaatattgggttagaaattggggtaattactaccacgatctctgatttgaagcagaacttgcaaacttatgatatcaaggagataagggagagtggaggttcgacttccttgcaatggcaggagaggcaacagcaattgaggcgtacttactctcatgttgtcaaccgtaatgttgttgggtcagagggaagtgtacatgaattggttgggcatttggtgaaggaagagcatcgccaccgagttgtttctatttgggggatgggcgggtccgggaagagcactcttgctagagaggtttatcatcataaagatgttatgcaacattttgattgttttgcttgggtgtgtatatctcaacaatatcaagtaagggatgtttgggagaggatttatgtcaaacttatttctgctacagatgagcagagaaaagaaattgcaagattgaaggatgatgagataccggggaggctttcttgtctccaaaacgaaagaaaatgtttgattgtcctcgatgacatttggaaaaccgagacgtgggactttttgaaagctgcatttcaacatgatgagaaatcaaagagcaagatactacttaccacacgcaataaaaatgtagctttgcatgccgatgtgaatggcttccactaccaacccccgccactaaatgcgactgaaagttgggagttgtttgagaggattgcaatgtgtggaagtgacgatgcaatagacaaggaagcctatgcaaaggaggaattaggaaagaagatgctcccacattgtgcaggtctgccattagctatcactgtgcttgcaggacttttagctagaaagaacacagtgagtgaatggaataccgtacacgaaaatgtatgtgtatacataagtagaggcattgaccgccatgaagaagaacatgcaagtgtatcatgggtgttggcattgagttatgatgacttgccgtatcacttaaaaccctgtttcttgtatttaggacattttcccgaggattatgagatcaatgtgaagattttgacaaaattatggattgcagaaggttttatttctttgacacaacaacgacaaggttcaagggaaacaatggaggatgtggcatacaattggttgaatgagttggtagaaaggtgtgtgattcaagtaggacagagaagttcaacttttgagaatattcaaacttgccggatgcatgatcttttgcgagatttgtgtttgaggaaggcggaagaggaaaattttctccaagttgtcaaaggttctcataaaaatgaggcaatgcatccagtttcttcttcttcttcttccatggtaacctatgtatcatcaatgggtaagattcgaagacttgccgtctacttggatgagaatgatgataaattggtaccctcacttggggaaagaggtggacaccttaggtccttgttatattttggccccaacgataattgttggttccctaaaaggaaagaattaataccttccatgttcaaggatttcaaattactcagagtgttgaggattgaaggtatgtctgatggagaagtaaaaatagagctgcctagagaaattggaaacatggtccacttgaggtttctgagtctaaggagaagtaatataaaatcgtttcctccgttcctaggaaacttgatttgtttgcagacacttgatttccgtgttagagatgccgccatgtttatcccaaatgtgatatgcaagatgaataagttgagacatttataccttccattgagttacagggctagaggtaaactgcagctatctactctcggtgatttacaaactttaaattctgtttcgaatggatattgtgatttgaatgatcttgctaaactaggcaatctaaggaaactgagaataagattgtcatctagccaatcgaaaattctggagaaaatcttggatgcggcaggctgcgtgctcaacggtattcggtccctgcggttggacaacgatgttggaatggaaagcggtgcagaggttagtcaaatagttgcagggtgcggtcaaatatacaagttgacgctgagggggcccacactagaactaccgcaagagttccactccttttcaaacctcaccaagttacgtttgtccttttgtgctctcaaggacgaccaaatggccgtactagagaagctgccgaacctgaaaagtcttgaactggcgttgaatatgtttgaggaaaatacaaaagtattggttttctccgctggaagctttcatcgtcttcagtttctttggcttcatgctttgaaaggaataacagagtggagggtggaggaaggagccatgccttgtctctgcaaattggtcattaataattgcagagaattgagtacggttccagatgggctgagacaccttactaccctcaaggaattgaagattgagcatatgcttgaactattctgtagtaagcttgaggaaggaggagaagacttccataaagtccaacacatcacttcccttttaatcgatgtgggattaaaagagtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

952

Amino Acids

108.74

Weight (kDa)

7.56

Isoelectric Point (pI)

43.12

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1100
Acc65I	GGTACC	1 cut(s)	1723
AccB1I	GGYRCC	1 cut(s)	1723
AccI	GTMKAC	2 cut(s)	1203, 1695
AccII	CGCG	1 cut(s)	84
AccIII	TCCGGA	1 cut(s)	74
AclWI	GGATC	1 cut(s)	60
AcoI	YGGCCR	1 cut(s)	2484
AcsI	RAATTY	3 cut(s)	1576, 2149, 2244
AcuI	CTGAAG	2 cut(s)	293, 2576
AdeI	CACNNNGTG	1 cut(s)	1106
AfaI	GTAC	6 cut(s)	472, 522, 1185, 1725, 2490, 2701
AfiI	CCNNNNNNNGG	6 cut(s)	441, 861, 1733, 1734, 1979, 2305
AhdI	GACNNNNNGTC	1 cut(s)	1691
AjiI	CACGTC	1 cut(s)	861
AjuI	GAANNNNNNNTTGG	2 cut(s)	2229, 2261
Alw21I	GWGCWC	4 cut(s)	103, 608, 2283, 2467
Alw26I	GTCTC	5 cut(s)	809, 851, 2065, 2666, 2713
Alw44I	GTGCAC	1 cut(s)	99
AlwI	GGATC	1 cut(s)	60
Ama87I	CYCGRG	1 cut(s)	1328
Aor13HI	TCCGGA	1 cut(s)	74
AoxI	GGCC	3 cut(s)	1774, 2393, 2484
ApaI	GGGCCC	1 cut(s)	2397
ApaLI	GTGCAC	1 cut(s)	99
ApeKI	GCWGC	6 cut(s)	203, 878, 1897, 2116, 2274, 2500
ApoI	RAATTY	3 cut(s)	1576, 2149, 2244
AseI	ATTAAT	2 cut(s)	1814, 2679
Asp700I	GAANNNNTTC	3 cut(s)	315, 965, 1578
Asp718I	GGTACC	1 cut(s)	1723
AspA2I	CCTAGG	1 cut(s)	1978
AspS9I	GGNCC	7 cut(s)	594, 1758, 1775, 1921, 2295, 2393, 2394
AsuC2I	CCSGG	2 cut(s)	598, 789
AsuHPI	GGTGA	4 cut(s)	53, 556, 2144, 2431
AsuII	TTCGAA	2 cut(s)	1681, 2159
AvaI	CYCGRG	1 cut(s)	1328
AvaII	GGWCC	4 cut(s)	594, 1758, 1921, 2295
AvrII	CCTAGG	1 cut(s)	1978
AxyI	CCTNAGG	1 cut(s)	1754
BaeGI	GKGCMC	2 cut(s)	103, 2397
BaeI	ACNNNNGTAYC	2 cut(s)	1644, 1677
BanI	GGYRCC	1 cut(s)	1723
BanII	GRGCYC	1 cut(s)	2397
BauI	CACGAG	1 cut(s)	26
BbsI	GAAGAC	3 cut(s)	1690, 2582, 2805
Bbv12I	GWGCWC	4 cut(s)	103, 608, 2283, 2467
BbvCI	CCTCAGC	2 cut(s)	6, 2387
BbvI	GCAGC	6 cut(s)	190, 865, 1884, 2128, 2261, 2487
BccI	CCATC	3 cut(s)	580, 1871, 2705
BceAI	ACGGC	3 cut(s)	1270, 1676, 2471
BcgI	CGANNNNNNTGC	2 cut(s)	418, 452
BcnI	CCSGG	2 cut(s)	598, 789
BcoDI	GTCTC	5 cut(s)	809, 851, 2065, 2666, 2713
BfmI	CTRYAG	3 cut(s)	738, 2114, 2773
BfuAI	ACCTGC	1 cut(s)	1100
BisI	GCNGC	8 cut(s)	204, 879, 1898, 2028, 2117, 2268, 2275, 2501
BlnI	CCTAGG	1 cut(s)	1978
BlsI	GCNGC	8 cut(s)	205, 880, 1899, 2029, 2118, 2269, 2276, 2502
Bme1390I	CCNGG	2 cut(s)	598, 789
Bme18I	GGWCC	4 cut(s)	594, 1758, 1921, 2295
BmeRI	GACNNNNNGTC	1 cut(s)	1691
BmeT110I	CYCGRG	1 cut(s)	1328
BmgBI	CACGTC	1 cut(s)	861
BmgT120I	GGNCC	7 cut(s)	594, 1758, 1775, 1921, 2295, 2393, 2394
BmiI	GGNNCC	9 cut(s)	595, 1725, 1777, 1796, 2297, 2394, 2395, 2650, 2706
BmrFI	CCNGG	2 cut(s)	598, 789
BpiI	GAAGAC	3 cut(s)	1690, 2582, 2805
BplI	GAGNNNNNCTC	2 cut(s)	2408, 2440
BpmI	CTGGAG	1 cut(s)	2270
Bpu10I	CCTNAGC	2 cut(s)	6, 2387
Bpu14I	TTCGAA	2 cut(s)	1681, 2159
BpuEI	CTTGAG	4 cut(s)	1948, 2453, 2720, 2804
BpuMI	CCSGG	2 cut(s)	598, 789
Bsa29I	ATCGAT	1 cut(s)	2838
BsaBI	GATNNNNATC	1 cut(s)	2227
BsaJI	CCNNGG	4 cut(s)	788, 1329, 1647, 1978
BsaWI	WCCGGW	1 cut(s)	74
Bsc4I	CCNNNNNNNGG	6 cut(s)	441, 861, 1733, 1734, 1979, 2305
Bse1I	ACTGG	2 cut(s)	1625, 2529
Bse21I	CCTNAGG	1 cut(s)	1754
Bse3DI	GCAATG	3 cut(s)	446, 1035, 1623
Bse8I	GATNNNNATC	1 cut(s)	2227
BseAI	TCCGGA	1 cut(s)	74
BseCI	ATCGAT	1 cut(s)	2838
BseDI	CCNNGG	4 cut(s)	788, 1329, 1647, 1978
BseGI	GGATG	9 cut(s)	226, 591, 706, 781, 1438, 1533, 1621, 1708, 2269
BseJI	GATNNNNATC	1 cut(s)	2227
BseLI	CCNNNNNNNGG	6 cut(s)	441, 861, 1733, 1734, 1979, 2305
BseMI	GCAATG	3 cut(s)	446, 1035, 1623
BseMII	CTCAG	5 cut(s)	1861, 1928, 2204, 2378, 2708
BseNI	ACTGG	2 cut(s)	1625, 2529
BseRI	GAGGAG	1 cut(s)	2808
BseSI	GKGCMC	2 cut(s)	103, 2397
BseXI	GCAGC	6 cut(s)	190, 865, 1884, 2128, 2261, 2487
BsgI	GTGCAG	2 cut(s)	1128, 2355
Bsh1236I	CGCG	1 cut(s)	84
BshFI	GGCC	3 cut(s)	1776, 2395, 2486
BshNI	GGYRCC	1 cut(s)	1723
BshVI	ATCGAT	1 cut(s)	2838
BsiHKAI	GWGCWC	4 cut(s)	103, 608, 2283, 2467
BsiHKCI	CYCGRG	1 cut(s)	1328
BsiSI	CCGG	4 cut(s)	75, 597, 788, 1525
BslFI	GGGAC	2 cut(s)	878, 2281
BslI	CCNNNNNNNGG	6 cut(s)	441, 861, 1733, 1734, 1979, 2305
BsmAI	GTCTC	5 cut(s)	809, 851, 2065, 2666, 2713
BsmBI	CGTCTC	1 cut(s)	851
BsmFI	GGGAC	2 cut(s)	878, 2281
BsnI	GGCC	3 cut(s)	1776, 2395, 2486
BsoBI	CYCGRG	1 cut(s)	1328
Bsp119I	TTCGAA	2 cut(s)	1681, 2159
Bsp120I	GGGCCC	1 cut(s)	2393
Bsp1286I	GDGCHC	5 cut(s)	103, 608, 2283, 2397, 2467
Bsp13I	TCCGGA	1 cut(s)	74
Bsp1407I	TGTACA	1 cut(s)	520
Bsp143I	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
Bsp19I	CCATGG	1 cut(s)	1647
Bsp68I	TCGCGA	1 cut(s)	84
BspANI	GGCC	3 cut(s)	1776, 2395, 2486
BspCNI	CTCAG	5 cut(s)	1860, 1929, 2205, 2379, 2709
BspDI	ATCGAT	1 cut(s)	2838
BspEI	TCCGGA	1 cut(s)	74
BspFNI	CGCG	1 cut(s)	84
BspLI	GGNNCC	9 cut(s)	595, 1725, 1777, 1796, 2297, 2394, 2395, 2650, 2706
BspMAI	CTGCAG	1 cut(s)	2118
BspMI	ACCTGC	1 cut(s)	1100
BspPI	GGATC	1 cut(s)	60
BspQI	GCTCTTC	2 cut(s)	546, 596
BspT104I	TTCGAA	2 cut(s)	1681, 2159
BspT107I	GGYRCC	1 cut(s)	1723
BsrDI	GCAATG	3 cut(s)	446, 1035, 1623
BsrGI	TGTACA	1 cut(s)	520
BsrI	ACTGG	2 cut(s)	1625, 2529
BssECI	CCNNGG	4 cut(s)	788, 1329, 1647, 1978
BssMI	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
BssNAI	GTATAC	1 cut(s)	1204
BssSI	CACGAG	1 cut(s)	26
BssT1I	CCWWGG	2 cut(s)	1647, 1978
Bst1107I	GTATAC	1 cut(s)	1204
Bst2BI	CACGAG	1 cut(s)	26
Bst4CI	ACNGT	6 cut(s)	494, 1132, 1165, 1183, 2288, 2704
Bst6I	CTCTTC	4 cut(s)	281, 546, 596, 1563
BstAPI	GCANNNNNTGC	1 cut(s)	385
BstAUI	TGTACA	1 cut(s)	520
BstBI	TTCGAA	2 cut(s)	1681, 2159
BstC8I	GCNNGC	5 cut(s)	99, 951, 1137, 2272, 2279
BstDEI	CTNAG	9 cut(s)	6, 1754, 1847, 1937, 1943, 2204, 2213, 2387, 2717
BstDSI	CCRYGG	1 cut(s)	1647
BstEII	GGTNACC	1 cut(s)	1651
BstF5I	GGATG	9 cut(s)	226, 591, 706, 781, 1438, 1533, 1621, 1708, 2269
BstFNI	CGCG	1 cut(s)	84
BstKTI	GATC	6 cut(s)	68, 88, 366, 1344, 1537, 2185
BstMAI	GTCTC	5 cut(s)	809, 851, 2065, 2666, 2713
BstMBI	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
BstMWI	GCNNNNNNNGC	6 cut(s)	385, 451, 466, 950, 1224, 2392
BstNSI	RCATGY	2 cut(s)	953, 1244
BstPI	GGTNACC	1 cut(s)	1651
BstSCI	CCNGG	2 cut(s)	596, 787
BstSFI	CTRYAG	3 cut(s)	738, 2114, 2773
BstSLI	GKGCMC	2 cut(s)	103, 2397
BstUI	CGCG	1 cut(s)	84
BstV1I	GCAGC	6 cut(s)	190, 865, 1884, 2128, 2261, 2487
BstV2I	GAAGAC	3 cut(s)	1690, 2582, 2805
BstX2I	RGATCY	1 cut(s)	65
BstYI	RGATCY	1 cut(s)	65
BstZ17I	GTATAC	1 cut(s)	1204
Bsu15I	ATCGAT	1 cut(s)	2838
Bsu36I	CCTNAGG	1 cut(s)	1754
BsuRI	GGCC	3 cut(s)	1776, 2395, 2486
BsuTUI	ATCGAT	1 cut(s)	2838
BtgI	CCRYGG	1 cut(s)	1647
BtgZI	GCGATG	1 cut(s)	542
BtrI	CACGTC	1 cut(s)	861
BtsCI	GGATG	9 cut(s)	226, 591, 706, 781, 1438, 1533, 1621, 1708, 2269
BtsIMutI	CAGTG	2 cut(s)	1128, 1170
BtuMI	TCGCGA	1 cut(s)	84
BveI	ACCTGC	1 cut(s)	1100
Cac8I	GCNNGC	5 cut(s)	99, 951, 1137, 2272, 2279
Cfr13I	GGNCC	7 cut(s)	594, 1758, 1775, 1921, 2295, 2393, 2394
ClaI	ATCGAT	1 cut(s)	2838
CseI	GACGC	2 cut(s)	155, 2392
Csp6I	GTAC	6 cut(s)	471, 521, 1184, 1724, 2489, 2700
CviQI	GTAC	6 cut(s)	471, 521, 1184, 1724, 2489, 2700
DdeI	CTNAG	9 cut(s)	6, 1754, 1847, 1937, 1943, 2204, 2213, 2387, 2717
DpnI	GATC	6 cut(s)	67, 87, 365, 1343, 1536, 2184
DpnII	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
DraI	TTTAAA	1 cut(s)	2148
DraIII	CACNNNGTG	1 cut(s)	1106
DriI	GACNNNNNGTC	1 cut(s)	1691
EaeI	YGGCCR	1 cut(s)	2484
Eam1104I	CTCTTC	4 cut(s)	281, 546, 596, 1563
Eam1105I	GACNNNNNGTC	1 cut(s)	1691
EarI	CTCTTC	4 cut(s)	281, 546, 596, 1563
EciI	GGCGGA	1 cut(s)	1580
Eco130I	CCWWGG	2 cut(s)	1647, 1978
Eco24I	GRGCYC	1 cut(s)	2397
Eco32I	GATATC	1 cut(s)	400
Eco47I	GGWCC	4 cut(s)	594, 1758, 1921, 2295
Eco57I	CTGAAG	2 cut(s)	293, 2576
Eco81I	CCTNAGG	1 cut(s)	1754
Eco88I	CYCGRG	1 cut(s)	1328
Eco91I	GGTNACC	1 cut(s)	1651
EcoO109I	RGGNCCY	2 cut(s)	1758, 2393
EcoO65I	GGTNACC	1 cut(s)	1651
EcoRV	GATATC	1 cut(s)	400
EcoT14I	CCWWGG	2 cut(s)	1647, 1978
EcoT22I	ATGCAT	2 cut(s)	1533, 1623
EcoT38I	GRGCYC	1 cut(s)	2397
ErhI	CCWWGG	2 cut(s)	1647, 1978
Esp3I	CGTCTC	1 cut(s)	851
FalI	AAGNNNNNCTT	4 cut(s)	368, 400, 1486, 1518
FaqI	GGGAC	2 cut(s)	878, 2281
FauI	CCCGC	2 cut(s)	584, 990
FauNDI	CATATG	1 cut(s)	2757
FblI	GTMKAC	2 cut(s)	1203, 1695
Fnu4HI	GCNGC	8 cut(s)	204, 879, 1898, 2028, 2117, 2268, 2275, 2501
FokI	GGATG	9 cut(s)	233, 598, 713, 788, 1445, 1540, 1608, 1715, 2276
FriOI	GRGCYC	1 cut(s)	2397
Fsp4HI	GCNGC	8 cut(s)	204, 879, 1898, 2028, 2117, 2268, 2275, 2501
GluI	GCNGC	8 cut(s)	204, 879, 1898, 2028, 2117, 2268, 2275, 2501
GsuI	CTGGAG	1 cut(s)	2270
HaeIII	GGCC	3 cut(s)	1776, 2395, 2486
HapII	CCGG	4 cut(s)	75, 597, 788, 1525
HgaI	GACGC	2 cut(s)	155, 2392
HincII	GTYRAC	2 cut(s)	490, 2382
HindII	GTYRAC	2 cut(s)	490, 2382
HindIII	AAGCTT	3 cut(s)	231, 2578, 2780
HinfI	GANTC	4 cut(s)	251, 1477, 1678, 1939
HpaII	CCGG	4 cut(s)	75, 597, 788, 1525
HphI	GGTGA	4 cut(s)	53, 556, 2144, 2431
Hpy188I	TCNGA	6 cut(s)	273, 370, 511, 1850, 1876, 1938
Hpy188III	TCNNGA	8 cut(s)	56, 75, 83, 241, 1328, 2249, 2519, 2708
Hpy99I	CGWCG	2 cut(s)	159, 324
HpyCH4III	ACNGT	6 cut(s)	494, 1132, 1165, 1183, 2288, 2704
HpyCH4IV	ACGT	2 cut(s)	860, 2449
HpyF10VI	GCNNNNNNNGC	6 cut(s)	385, 451, 466, 950, 1224, 2392
HpyF3I	CTNAG	9 cut(s)	6, 1754, 1847, 1937, 1943, 2204, 2213, 2387, 2717
HpySE526I	ACGT	2 cut(s)	860, 2449
Kpn2I	TCCGGA	1 cut(s)	74
KpnI	GGTACC	1 cut(s)	1727
Kzo9I	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
LguI	GCTCTTC	2 cut(s)	546, 596
LmnI	GCTCC	2 cut(s)	1101, 2648
Lsp1109I	GCAGC	6 cut(s)	190, 865, 1884, 2128, 2261, 2487
MaeII	ACGT	2 cut(s)	860, 2449
MaeIII	GTNAC	6 cut(s)	41, 323, 1040, 1651, 2093, 2445
MalI	GATC	6 cut(s)	67, 87, 365, 1343, 1536, 2184
MboI	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
MfeI	CAATTG	2 cut(s)	461, 1444
MflI	RGATCY	1 cut(s)	65
MhlI	GDGCHC	5 cut(s)	103, 608, 2283, 2397, 2467
MlyI	GAGTC	1 cut(s)	1948
MmeI	TCCRAC	3 cut(s)	2286, 2299, 2839
Mph1103I	ATGCAT	2 cut(s)	1533, 1623
MroI	TCCGGA	1 cut(s)	74
MroXI	GAANNNNTTC	3 cut(s)	315, 965, 1578
MseI	TTAA	6 cut(s)	1295, 1814, 2147, 2679, 2834, 2849
MslI	CAYNNNNRTG	5 cut(s)	636, 954, 1191, 1245, 1608
MspA1I	CMGCKG	1 cut(s)	2573
MspI	CCGG	4 cut(s)	75, 597, 788, 1525
MspR9I	CCNGG	2 cut(s)	598, 789
MunI	CAATTG	2 cut(s)	461, 1444
MvnI	CGCG	1 cut(s)	84
MwoI	GCNNNNNNNGC	6 cut(s)	385, 451, 466, 950, 1224, 2392
NciI	CCSGG	2 cut(s)	598, 789
NcoI	CCATGG	1 cut(s)	1647
NdeI	CATATG	1 cut(s)	2757
NdeII	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
NlaIV	GGNNCC	9 cut(s)	595, 1725, 1777, 1796, 2297, 2394, 2395, 2650, 2706
NmuCI	GTSAC	3 cut(s)	41, 323, 1040
NruI	TCGCGA	1 cut(s)	84
NsiI	ATGCAT	2 cut(s)	1533, 1623
NspI	RCATGY	2 cut(s)	953, 1244
NspV	TTCGAA	2 cut(s)	1681, 2159
PaeI	GCATGC	1 cut(s)	953
PciSI	GCTCTTC	2 cut(s)	546, 596
PcsI	WCGNNNNNNNCGW	1 cut(s)	1970
PdmI	GAANNNNTTC	3 cut(s)	315, 965, 1578
PfeI	GAWTC	3 cut(s)	251, 1477, 1678
PfoI	TCCNGGA	1 cut(s)	596
PkrI	GCNGC	8 cut(s)	205, 880, 1899, 2029, 2118, 2269, 2276, 2502
PleI	GAGTC	1 cut(s)	1947
PpsI	GAGTC	1 cut(s)	1947
PpuMI	RGGWCCY	1 cut(s)	1758
PshBI	ATTAAT	2 cut(s)	1814, 2679
Psp5II	RGGWCCY	1 cut(s)	1758
PspEI	GGTNACC	1 cut(s)	1651
PspN4I	GGNNCC	9 cut(s)	595, 1725, 1777, 1796, 2297, 2394, 2395, 2650, 2706
PspOMI	GGGCCC	1 cut(s)	2393
PspPI	GGNCC	7 cut(s)	594, 1758, 1775, 1921, 2295, 2393, 2394
PspPPI	RGGWCCY	1 cut(s)	1758
PstI	CTGCAG	1 cut(s)	2118
PsuI	RGATCY	1 cut(s)	65
RruI	TCGCGA	1 cut(s)	84
RsaI	GTAC	6 cut(s)	472, 522, 1185, 1725, 2490, 2701
RsaNI	GTAC	6 cut(s)	471, 521, 1184, 1724, 2489, 2700
RseI	CAYNNNNRTG	5 cut(s)	636, 954, 1191, 1245, 1608
SapI	GCTCTTC	2 cut(s)	546, 596
SaqAI	TTAA	6 cut(s)	1295, 1814, 2147, 2679, 2834, 2849
SatI	GCNGC	8 cut(s)	204, 879, 1898, 2028, 2117, 2268, 2275, 2501
Sau3AI	GATC	6 cut(s)	65, 85, 363, 1341, 1534, 2182
Sau96I	GGNCC	7 cut(s)	594, 1758, 1775, 1921, 2295, 2393, 2394
SchI	GAGTC	1 cut(s)	1948
ScrFI	CCNGG	2 cut(s)	598, 789
SduI	GDGCHC	5 cut(s)	103, 608, 2283, 2397, 2467
SfcI	CTRYAG	3 cut(s)	738, 2114, 2773
SfuI	TTCGAA	2 cut(s)	1681, 2159
SinI	GGWCC	4 cut(s)	594, 1758, 1921, 2295
SmiMI	CAYNNNNRTG	5 cut(s)	636, 954, 1191, 1245, 1608
SmlI	CTYRAG	4 cut(s)	1927, 2468, 2735, 2783
SmoI	CTYRAG	4 cut(s)	1927, 2468, 2735, 2783
SphI	GCATGC	1 cut(s)	953
SspI	AATATT	2 cut(s)	331, 1513
StyD4I	CCNGG	2 cut(s)	596, 787
StyI	CCWWGG	2 cut(s)	1647, 1978
TaaI	ACNGT	6 cut(s)	494, 1132, 1165, 1183, 2288, 2704
TaiI	ACGT	2 cut(s)	863, 2452
TaqI	TCGA	6 cut(s)	428, 837, 1681, 2159, 2240, 2838
TaqII	GACCGA	1 cut(s)	2283
TatI	WGTACW	1 cut(s)	520
TauI	GCSGC	2 cut(s)	2030, 2270
TfiI	GAWTC	3 cut(s)	251, 1477, 1678
Tru1I	TTAA	6 cut(s)	1295, 1814, 2147, 2679, 2834, 2849
Tru9I	TTAA	6 cut(s)	1295, 1814, 2147, 2679, 2834, 2849
TscAI	CASTG	2 cut(s)	1135, 1170
TseFI	GTSAC	3 cut(s)	41, 323, 1040
TseI	GCWGC	6 cut(s)	203, 878, 1897, 2116, 2274, 2500
Tsp45I	GTSAC	3 cut(s)	41, 323, 1040
TspDTI	ATGAA	8 cut(s)	37, 109, 295, 540, 1245, 2075, 2573, 2597
TspGWI	ACGGA	2 cut(s)	1962, 2003
TspRI	CASTG	2 cut(s)	1135, 1170
VneI	GTGCAC	1 cut(s)	99
VpaK11BI	GGWCC	4 cut(s)	594, 1758, 1921, 2295
VspI	ATTAAT	2 cut(s)	1814, 2679
XapI	RAATTY	3 cut(s)	1576, 2149, 2244
XceI	RCATGY	2 cut(s)	953, 1244
XmaJI	CCTAGG	1 cut(s)	1978
XmiI	GTMKAC	2 cut(s)	1203, 1695
XmnI	GAANNNNTTC	3 cut(s)	315, 965, 1578
Zsp2I	ATGCAT	2 cut(s)	1533, 1623

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.