Rh1CG161300

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
Physical Location & Seq
Reverse (-)
35709308 .. 35725269
15962 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG161300.1

Sequence Viewer

Length: 2748 bp
ATGGCCGAGGCTGCCGTTTTATTCTTGCTCGGAGATCTCACTAACTTTATCGTTGAGGAAAATCAATTGTTGAAGTTGAAGGGAGTCAAGGATCAATTTGAGCAGGCGCAAACGGTGCTACAGCAGATACAGGCCGTCCTGAAGGATGCGGGTTCAAAACAGGAAGAGGATGAAGAAATCGACGGATGGATGTCAACTGTTAGAGATGCTGTTTATAATTTGGAGGAAGTCGTTCAAGAATTTTTCTTTGAAGTGGCTTCCAAGAACAGAGAAAATAGTATGATGATTGTTCTGAAAAAGTTGGCTCGCTTCCCGAAGGACGGTAACAAAATTGGCTCACGAATTGAGAGCATCACGGCTGTACTTACAGAATTGAGCAGAAGACCATCAACTGACGGGGGAGGTGCCACTTCCGCTGAGAGGGAACGAGATCCAAGACAAACTACTCCATCTGTTCGTGAAGGTGATGTTGTTGGTGTACAGGGAGATATAAAGATGTTAGTCGAGCGTCTGGTTAACGAAGAAAACTGTCATCAAGTAGTTTCTATTTGGGGAATGGGCGGGTTGGGGAAAACCACGCTTGCAAAGATGGTTTATAATGATCCTGGTGTTAGGAACCATTTTAGTTATTTCGCTTGGGTGTGCATTTCTCAAAAATATCAAGAAAGAGATGTTTTGGGAGAAATTCTGGATCAACTTAACAGTGGGGATGTTCAGCAAAGAAGGGATTTTGCAAATACGACCACTCATGAATTAGCAGATCAACTTCGCACTGCCCTCCAAGCCAAAACATGTTTGGTGGTGCTTGATGACATTTGGAACCATGAAGTATGGCAATCTTTACGAGATGTAGTTCCACCTGTTACGGAAACAAAGAGCCGAATATTAGTCACTACTCGCAATACGCAAGTAGCTTCCCTTCCAAACGTGAATACTTCACTCTATGAAGCTCGGCTACTGAGTGATACTGAAAGCTGGGAACTGTTCGAGAAGAGAGCAAACTTTGGCGGAGAAGATACAGGATCCGATTATGAAATTAAGAGAACGCTAGGGGAGACGATGCTTAAACGTTGTGCAGGTTTGCCAGCAGCTATCATTTTGCTAGCAGGACTTCTAGCTCAAAAAAACACAGCTAGTGACTGGAATGCCGTGCATGATGGTGTTGTTAAATATTTATGGAGAGACACAGCATTTAATAGTCCAGTATCGGTGTTTGAAAGGAGTTACAGAGATCTACCATTTCGCTTACAGCCATGCTTTCAATATTTAGCACAATTTCCAGAAGATTATGAGATATCAACGAAAAGGTTGACTCAATTGTGGATGGCAGAAGGTCTTATACCTTCAGAAGGTCTTGTACCTTCAGAATCAGAAGAAACAATGGAAGATGTGTCATATCGTTTGTTAGATGAAATGGTGGAAAGGTCTATGGTTCAAGTTGGAGGACATGGTTCAACTAGGATGATAAAAACCTGCCGTCTGCATCGTCTCATGCGGGACATGTGCTTGATGAAGGCTAAAGAAGAGAATTTTCTCCAAGTTCAGGATCTTTCTGCAGCCACCTTTGTCCAGGCAGCACCAATTAATAAAGTTCGAAGGCTTTCCGTCTACTTGAAAGGAGAAGTTGATGAGTTGGCTCCCACTAGAACTGAAAGCAATGGTCACCTCAAGTCTCTGTTATACTTTGTCCAAGAAAACTTTTACTCAGAGCGCAGTAAAAATTTACTAGTGTCACTGTTCAAGGACTTCAAAATGCTTAGAGTGTTGAAGTTCGAAGATATGAAGGCAGAGCCAGAAGTAGAGCTACCGAGTGTTGTGGGGAATCTAGTGTTGCTGAGGTTCTTAAGTCTAAAGAATAGTGAGATAAAAAGGATTCCATCATCTGTAGCTAATTTGGTGTTTTTGCAAACTCTTGATATACGTTGTGCTGAATGGGTTAGCGTTGAAGTCCCAAATGTATTTGGGGAGATGAGCCAATTGAGACATTTGTATTTACCCTTGAATCACAGGGCAACTGCAAAACTGTCACTGGCTAATCTTAGCAATTTGCAGACACTAGTCAACTTATCAAGTGAAGATTGCAATTTGAATGATATTTTAAAATTGACCAGTCTAAGAAAACTAGTCATAAATGCACCACGGTCTACAGACTTGACAAATCTGGGTGAGTTTATGAGATCTAAAGACATCAGCTTCGACCGCCATCTCCACTCTCTATCTCTGATGGCGGGCAATGGTACTGGGGACATAACAATGGAGGTAGTATCAAGGTGTCCTCAACTACGCAAGCTGCGTCTGAATGGCCGAATCAAAGAGTTGCAGGATAAATTCTTGTGTTCATACCTCACCAAGGTAACGCTAGAGCAAACTCATCTTGAGGGCTACGACATTGAAAGACTAGAGAAGCTGGAAAACTTAAAATTGCTTACCCTTAGAATGGATGCTATCAAGTCAGGAACGATGGGTTTCTCCCAAAGAGGCTTTCCTAGTCTTCAATTTCTTTCCCTCATTGGGTTATCTGAACTGAAGGAGTGGAAGGTGGAGAAAGGAGCTATGCCGAGTCTGAGCAAATTGCACATTGAATATTGCTGGGGATTGAAGGTACTTCCAGAGGGGCTTCAATATATTTCTTCCCTCAAGGAATTAACCATCAAAAGGATGTACCATGAATTCTGTAGTAGGCTTGGTGAAGAAGGAGAGGATTTCTACAAAATCAAGCATGTGCCTTCTGTTACAAACTTACAATAG

Protein Analysis

915

Amino Acids

104.02

Weight (kDa)

5.9

Isoelectric Point (pI)

42.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 93 3.9e-17 Rx N-terminal domain
NB-ARC PF00931 162 - 333 7.6e-41 NB-ARC domain
WHD_DRP PF23559 426 - 501 7.3e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 575 - 889 1.1e-36 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 216, 597
Acc36I ACCTGC 2 cut(s) 1067, 1481
AccB1I GGYRCC 1 cut(s) 404
AccI GTMKAC 2 cut(s) 1608, 2144
AciI CCGC 7 cut(s) 149, 414, 561, 1008, 1495, 2200, 2228
AclI AACGTT 1 cut(s) 1069
AclWI GGATC 7 cut(s) 99, 425, 596, 699, 1017, 1030, 1554
AcoI YGGCCR 2 cut(s) 3, 2302
AcsI RAATTY 6 cut(s) 239, 684, 1528, 1720, 2327, 2669
AcuI CTGAAG 4 cut(s) 161, 1329, 1347, 2546
AfaI GTAC 6 cut(s) 363, 480, 1359, 2239, 2604, 2663
AfiI CCNNNNNNNGG 8 cut(s) 320, 420, 1349, 1543, 2350, 2437, 2511, 2655
AflII CTTAAG 1 cut(s) 1843
AflIII ACRYGT 2 cut(s) 791, 1500
AhlI ACTAGT 3 cut(s) 1726, 2056, 2122
AjnI CCWGG 2 cut(s) 604, 1569
AjuI GAANNNNNNNTTGG 2 cut(s) 2466, 2498
Alw26I GTCTC 5 cut(s) 1049, 1176, 1493, 1677, 1975
AlwI GGATC 7 cut(s) 99, 425, 596, 699, 1017, 1030, 1554
AoxI GGCC 3 cut(s) 3, 132, 2302
ApeKI GCWGC 5 cut(s) 11, 1088, 1556, 1574, 2290
ApoI RAATTY 6 cut(s) 239, 684, 1528, 1720, 2327, 2669
ArsI GACNNNNNNTTYG 2 cut(s) 2177, 2209
AseI ATTAAT 1 cut(s) 1584
Asp700I GAANNNNTTC 2 cut(s) 231, 1600
AspLEI GCGC 2 cut(s) 109, 1713
AsuHPI GGTGA 5 cut(s) 476, 1655, 2177, 2338, 2699
AsuII TTCGAA 2 cut(s) 1594, 1773
AsuNHI GCTAGC 1 cut(s) 1102
BamHI GGATCC 1 cut(s) 1022
BanI GGYRCC 1 cut(s) 404
BbsI GAAGAC 2 cut(s) 388, 2483
BbvCI CCTCAGC 1 cut(s) 1835
BbvI GCAGC 4 cut(s) 1100, 1568, 1586, 2277
BceAI ACGGC 4 cut(s) 119, 372, 1133, 1461
BciT130I CCWGG 2 cut(s) 606, 1571
BcoDI GTCTC 5 cut(s) 1049, 1176, 1493, 1677, 1975
BcuI ACTAGT 3 cut(s) 1726, 2056, 2122
BfmI CTRYAG 5 cut(s) 119, 1554, 1884, 2145, 2674
BfrI CTTAAG 1 cut(s) 1843
BfuAI ACCTGC 2 cut(s) 1067, 1481
BglII AGATCT 3 cut(s) 34, 1231, 2177
BisI GCNGC 5 cut(s) 12, 1089, 1557, 1575, 2291
BlsI GCNGC 5 cut(s) 13, 1090, 1558, 1576, 2292
Bme1390I CCNGG 2 cut(s) 606, 1571
BmiI GGNNCC 5 cut(s) 406, 617, 821, 1024, 1638
BmrFI CCNGG 2 cut(s) 606, 1571
BmrI ACTGGG 1 cut(s) 2250
BmsI GCATC 6 cut(s) 136, 196, 360, 1050, 1492, 2431
BmtI GCTAGC 1 cut(s) 1106
BmuI ACTGGG 1 cut(s) 2250
BoxI GACNNNNGTC 1 cut(s) 2057
BpiI GAAGAC 2 cut(s) 388, 2483
Bpu10I CCTNAGC 1 cut(s) 1835
Bpu14I TTCGAA 2 cut(s) 1594, 1773
BpuEI CTTGAG 3 cut(s) 1652, 2396, 2621
BsaJI CCNNGG 3 cut(s) 6, 2138, 2349
Bsc4I CCNNNNNNNGG 8 cut(s) 320, 420, 1349, 1543, 2350, 2437, 2511, 2655
Bse1I ACTGG 5 cut(s) 1145, 1202, 2034, 2109, 2245
Bse3DI GCAATG 2 cut(s) 1663, 2239
BseBI CCWGG 2 cut(s) 606, 1571
BseDI CCNNGG 3 cut(s) 6, 2138, 2349
BseGI GGATG 9 cut(s) 151, 175, 191, 195, 715, 1329, 1467, 2446, 2664
BseLI CCNNNNNNNGG 8 cut(s) 320, 420, 1349, 1543, 2350, 2437, 2511, 2655
BseMI GCAATG 2 cut(s) 1663, 2239
BseMII CTCAG 5 cut(s) 408, 950, 1719, 1826, 2555
BseNI ACTGG 5 cut(s) 1145, 1202, 2034, 2109, 2245
BseXI GCAGC 4 cut(s) 1100, 1568, 1586, 2277
BseYI CCCAGC 2 cut(s) 975, 2589
BsgI GTGCAG 1 cut(s) 1095
Bsh1285I CGRYCG 1 cut(s) 2200
BshFI GGCC 3 cut(s) 5, 134, 2304
BshNI GGYRCC 1 cut(s) 404
BsiEI CGRYCG 1 cut(s) 2200
BslFI GGGAC 3 cut(s) 1511, 1934, 2258
BslI CCNNNNNNNGG 8 cut(s) 320, 420, 1349, 1543, 2350, 2437, 2511, 2655
BsmAI GTCTC 5 cut(s) 1049, 1176, 1493, 1677, 1975
BsmBI CGTCTC 2 cut(s) 1049, 1493
BsmFI GGGAC 3 cut(s) 1511, 1934, 2258
BsmI GAATGC 1 cut(s) 1150
BsnI GGCC 3 cut(s) 5, 134, 2304
Bsp119I TTCGAA 2 cut(s) 1594, 1773
Bsp1407I TGTACA 1 cut(s) 478
BspACI CCGC 7 cut(s) 149, 414, 561, 1008, 1495, 2200, 2228
BspANI GGCC 3 cut(s) 5, 134, 2304
BspCNI CTCAG 5 cut(s) 409, 951, 1718, 1827, 2556
BspHI TCATGA 1 cut(s) 748
BspLI GGNNCC 5 cut(s) 406, 617, 821, 1024, 1638
BspMAI CTGCAG 1 cut(s) 1558
BspMI ACCTGC 2 cut(s) 1067, 1481
BspOI GCTAGC 1 cut(s) 1106
BspPI GGATC 7 cut(s) 99, 425, 596, 699, 1017, 1030, 1554
BspT104I TTCGAA 2 cut(s) 1594, 1773
BspT107I GGYRCC 1 cut(s) 404
BspTI CTTAAG 1 cut(s) 1843
BsrDI GCAATG 2 cut(s) 1663, 2239
BsrGI TGTACA 1 cut(s) 478
BsrI ACTGG 5 cut(s) 1145, 1202, 2034, 2109, 2245
BssECI CCNNGG 3 cut(s) 6, 2138, 2349
BssT1I CCWWGG 1 cut(s) 2349
Bst2UI CCWGG 2 cut(s) 606, 1571
Bst4CI ACNGT 9 cut(s) 115, 199, 323, 530, 704, 984, 1737, 2025, 2142
Bst6I CTCTTC 3 cut(s) 159, 986, 1518
BstAFI CTTAAG 1 cut(s) 1843
BstAPI GCANNNNNTGC 1 cut(s) 115
BstAUI TGTACA 1 cut(s) 478
BstBI TTCGAA 2 cut(s) 1594, 1773
BstC8I GCNNGC 7 cut(s) 105, 307, 582, 1086, 1104, 2230, 2288
BstDEI CTNAG 9 cut(s) 417, 959, 1705, 1757, 1835, 2039, 2114, 2432, 2564
BstDSI CCRYGG 1 cut(s) 2138
BstEII GGTNACC 1 cut(s) 1661
BstENI CCTNNNNNAGG 2 cut(s) 1347, 2348
BstF5I GGATG 9 cut(s) 151, 175, 191, 195, 715, 1329, 1467, 2446, 2664
BstHHI GCGC 2 cut(s) 109, 1713
BstMAI GTCTC 5 cut(s) 1049, 1176, 1493, 1677, 1975
BstMCI CGRYCG 1 cut(s) 2200
BstMWI GCNNNNNNNGC 5 cut(s) 11, 115, 413, 782, 2199
BstNI CCWGG 2 cut(s) 606, 1571
BstNSI RCATGY 3 cut(s) 795, 1504, 2723
BstPAI GACNNNNGTC 1 cut(s) 2057
BstPI GGTNACC 1 cut(s) 1661
BstSCI CCNGG 2 cut(s) 604, 1569
BstSFI CTRYAG 5 cut(s) 119, 1554, 1884, 2145, 2674
BstV1I GCAGC 4 cut(s) 1100, 1568, 1586, 2277
BstV2I GAAGAC 2 cut(s) 388, 2483
BstX2I RGATCY 6 cut(s) 34, 430, 1022, 1231, 1546, 2177
BstYI RGATCY 6 cut(s) 34, 430, 1022, 1231, 1546, 2177
BsuRI GGCC 3 cut(s) 5, 134, 2304
BtgI CCRYGG 1 cut(s) 2138
BtsCI GGATG 9 cut(s) 151, 175, 191, 195, 715, 1329, 1467, 2446, 2664
BtsI GCAGTG 1 cut(s) 771
BtsIMutI CAGTG 4 cut(s) 709, 771, 1733, 2027
BveI ACCTGC 2 cut(s) 1067, 1481
Cac8I GCNNGC 7 cut(s) 105, 307, 582, 1086, 1104, 2230, 2288
CciI TCATGA 1 cut(s) 748
CfoI GCGC 2 cut(s) 109, 1713
CseI GACGC 2 cut(s) 497, 2282
Csp6I GTAC 6 cut(s) 362, 479, 1358, 2238, 2603, 2662
CviQI GTAC 6 cut(s) 362, 479, 1358, 2238, 2603, 2662
DdeI CTNAG 9 cut(s) 417, 959, 1705, 1757, 1835, 2039, 2114, 2432, 2564
DraI TTTAAA 1 cut(s) 2100
EaeI YGGCCR 2 cut(s) 3, 2302
Eam1104I CTCTTC 3 cut(s) 159, 986, 1518
EarI CTCTTC 3 cut(s) 159, 986, 1518
EciI GGCGGA 1 cut(s) 1023
Eco130I CCWWGG 1 cut(s) 2349
Eco32I GATATC 1 cut(s) 1296
Eco57I CTGAAG 4 cut(s) 161, 1329, 1347, 2546
Eco91I GGTNACC 1 cut(s) 1661
EcoNI CCTNNNNNAGG 2 cut(s) 1347, 2348
EcoO65I GGTNACC 1 cut(s) 1661
EcoRI GAATTC 1 cut(s) 2669
EcoRII CCWGG 2 cut(s) 604, 1569
EcoRV GATATC 1 cut(s) 1296
EcoT14I CCWWGG 1 cut(s) 2349
ErhI CCWWGG 1 cut(s) 2349
Esp3I CGTCTC 2 cut(s) 1049, 1493
FaqI GGGAC 3 cut(s) 1511, 1934, 2258
FauI CCCGC 4 cut(s) 142, 554, 1488, 2221
FblI GTMKAC 2 cut(s) 1608, 2144
Fnu4HI GCNGC 5 cut(s) 12, 1089, 1557, 1575, 2291
FokI GGATG 9 cut(s) 158, 182, 198, 202, 722, 1336, 1474, 2453, 2671
Fsp4HI GCNGC 5 cut(s) 12, 1089, 1557, 1575, 2291
GlaI GCGC 2 cut(s) 108, 1712
GluI GCNGC 5 cut(s) 12, 1089, 1557, 1575, 2291
GsaI CCCAGC 2 cut(s) 979, 2593
HaeIII GGCC 3 cut(s) 5, 134, 2304
HgaI GACGC 2 cut(s) 497, 2282
HhaI GCGC 2 cut(s) 109, 1713
Hin6I GCGC 2 cut(s) 107, 1711
HinP1I GCGC 2 cut(s) 107, 1711
HincII GTYRAC 4 cut(s) 195, 517, 1311, 2062
HindII GTYRAC 4 cut(s) 195, 517, 1311, 2062
HinfI GANTC 8 cut(s) 84, 1312, 1367, 1822, 1873, 2002, 2307, 2560
HpaI GTTAAC 1 cut(s) 517
HphI GGTGA 5 cut(s) 476, 1655, 2177, 2338, 2699
Hpy166II GTNNAC 7 cut(s) 195, 479, 517, 1311, 1609, 2062, 2145
Hpy8I GTNNAC 7 cut(s) 195, 479, 517, 1311, 1609, 2062, 2145
Hpy99I CGWCG 1 cut(s) 185
HpyCH4III ACNGT 9 cut(s) 115, 199, 323, 530, 704, 984, 1737, 2025, 2142
HpyCH4IV ACGT 3 cut(s) 927, 1069, 1921
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 115, 413, 782, 2199
HpyF3I CTNAG 9 cut(s) 417, 959, 1705, 1757, 1835, 2039, 2114, 2432, 2564
HpySE526I ACGT 3 cut(s) 927, 1069, 1921
HspAI GCGC 2 cut(s) 107, 1711
KspAI GTTAAC 1 cut(s) 517
LmnI GCTCC 2 cut(s) 1642, 2549
Lsp1109I GCAGC 4 cut(s) 1100, 1568, 1586, 2277
LweI GCATC 6 cut(s) 136, 196, 360, 1050, 1492, 2431
MaeII ACGT 3 cut(s) 927, 1069, 1921
MfeI CAATTG 3 cut(s) 65, 1316, 1976
MflI RGATCY 6 cut(s) 34, 430, 1022, 1231, 1546, 2177
MlyI GAGTC 3 cut(s) 93, 1306, 2569
MmeI TCCRAC 1 cut(s) 1420
MroXI GAANNNNTTC 2 cut(s) 231, 1600
MslI CAYNNNNRTG 2 cut(s) 1158, 2252
MspA1I CMGCKG 1 cut(s) 416
MspCI CTTAAG 1 cut(s) 1843
MspR9I CCNGG 2 cut(s) 606, 1571
MunI CAATTG 3 cut(s) 65, 1316, 1976
Mva1269I GAATGC 1 cut(s) 1150
MvaI CCWGG 2 cut(s) 606, 1571
MwoI GCNNNNNNNGC 5 cut(s) 11, 115, 413, 782, 2199
NheI GCTAGC 1 cut(s) 1102
NlaIV GGNNCC 5 cut(s) 406, 617, 821, 1024, 1638
NmeAIII GCCGAG 3 cut(s) 31, 931, 2583
NmuCI GTSAC 5 cut(s) 889, 1136, 1661, 1731, 2025
NspI RCATGY 3 cut(s) 795, 1504, 2723
NspV TTCGAA 2 cut(s) 1594, 1773
PagI TCATGA 1 cut(s) 748
PciI ACATGT 2 cut(s) 791, 1500
PcsI WCGNNNNNNNCGW 1 cut(s) 2290
PctI GAATGC 1 cut(s) 1150
PdmI GAANNNNTTC 2 cut(s) 231, 1600
PfeI GAWTC 5 cut(s) 1367, 1822, 1873, 2002, 2307
PkrI GCNGC 5 cut(s) 13, 1090, 1558, 1576, 2292
PleI GAGTC 3 cut(s) 92, 1306, 2568
PpsI GAGTC 3 cut(s) 92, 1306, 2568
PscI ACATGT 2 cut(s) 791, 1500
PshAI GACNNNNGTC 1 cut(s) 2057
PshBI ATTAAT 1 cut(s) 1584
PsiI TTATAA 2 cut(s) 216, 597
Psp1406I AACGTT 1 cut(s) 1069
Psp6I CCWGG 2 cut(s) 604, 1569
PspEI GGTNACC 1 cut(s) 1661
PspFI CCCAGC 2 cut(s) 975, 2589
PspGI CCWGG 2 cut(s) 604, 1569
PspN4I GGNNCC 5 cut(s) 406, 617, 821, 1024, 1638
PstI CTGCAG 1 cut(s) 1558
PsuI RGATCY 6 cut(s) 34, 430, 1022, 1231, 1546, 2177
RsaI GTAC 6 cut(s) 363, 480, 1359, 2239, 2604, 2663
RsaNI GTAC 6 cut(s) 362, 479, 1358, 2238, 2603, 2662
RseI CAYNNNNRTG 2 cut(s) 1158, 2252
SatI GCNGC 5 cut(s) 12, 1089, 1557, 1575, 2291
SchI GAGTC 3 cut(s) 93, 1306, 2569
ScrFI CCNGG 2 cut(s) 606, 1571
SfaNI GCATC 6 cut(s) 136, 196, 360, 1050, 1492, 2431
SfcI CTRYAG 5 cut(s) 119, 1554, 1884, 2145, 2674
SfuI TTCGAA 2 cut(s) 1594, 1773
SmiMI CAYNNNNRTG 2 cut(s) 1158, 2252
SmlI CTYRAG 4 cut(s) 1667, 1843, 2375, 2636
SmoI CTYRAG 4 cut(s) 1667, 1843, 2375, 2636
SpeI ACTAGT 3 cut(s) 1726, 2056, 2122
SsiI CCGC 7 cut(s) 149, 414, 561, 1008, 1495, 2200, 2228
SspI AATATT 4 cut(s) 885, 1172, 1265, 2585
StyD4I CCNGG 2 cut(s) 604, 1569
StyI CCWWGG 1 cut(s) 2349
TaaI ACNGT 9 cut(s) 115, 199, 323, 530, 704, 984, 1737, 2025, 2142
TaiI ACGT 3 cut(s) 930, 1072, 1924
TaqI TCGA 6 cut(s) 180, 504, 987, 1594, 1773, 2196
TatI WGTACW 2 cut(s) 361, 478
TfiI GAWTC 5 cut(s) 1367, 1822, 1873, 2002, 2307
TscAI CASTG 4 cut(s) 709, 778, 1740, 2034
TseFI GTSAC 5 cut(s) 889, 1136, 1661, 1731, 2025
TseI GCWGC 5 cut(s) 11, 1088, 1556, 1574, 2290
Tsp45I GTSAC 5 cut(s) 889, 1136, 1661, 1731, 2025
TspGWI ACGGA 3 cut(s) 198, 881, 1594
TspRI CASTG 4 cut(s) 709, 778, 1740, 2034
Vha464I CTTAAG 1 cut(s) 1843
VspI ATTAAT 1 cut(s) 1584
XagI CCTNNNNNAGG 2 cut(s) 1347, 2348
XapI RAATTY 6 cut(s) 239, 684, 1528, 1720, 2327, 2669
XceI RCATGY 3 cut(s) 795, 1504, 2723
XcmI CCANNNNNNNNNTGG 1 cut(s) 793
XmiI GTMKAC 2 cut(s) 1608, 2144
XmnI GAANNNNTTC 2 cut(s) 231, 1600
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.