Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0021457.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

1328 .. 3571

Gene Structure 2244 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0021457.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1608 bp

atgagggaggatgaaattgccaaaaagcttcatcttattctacaagaaaggacatgtttggtggttctagatgacatctggagtatggagacatgggactctttgaaagctggatttccacatgagaaaactatgagcaaaatattactcaccacgcgcaacaaagcagtagctctgcacgcagatagaaaagggtttcttcaccaacctcggccactaaatgactctgaaagttggcaattgtttgagatcatagctatttttggaagggaggaaacaaatcctgaaatccactcaaagatgaaagagttgggaaagaagatgcttctgcattgtgcaggtttgccattagccatcagtgcacttgccggacttctagctagaaaggacacaattgatgagtggaatgcagtgcataagaatgtttttgcatacataagaagaggaaaaggccatgaacaagaatatgcaggtgcatcatgggttttggcattgagttatgatgacttgccataccatttaaaaccatgctttctatatttaggtcactttcctgaggattttgaaataccagtgaaactattgactcaattatggatggcagaaggtctaatatctttggggcaacaaggacaaagtttcattggatcattggaagacatagggtacagctacttgagtgaattagtggaaagatgtgtggttcaaattggagaaaggggttcaattagaaagattaaaacttgccgcatccatgaccttatgagagatttgtgcttgttaaagacagaagaggagaacttccttcaaattgttaacttttcgcataaaaaagaggcaatgtatccttctgcttcttctacaataagtatcagtaaagttcgaagacttgcaatccatttggatgataaggctgacagattggttcccccaagagatgaaagaaatggccacctcaggtccttgttatacttcaccccaagaaactggatgccacgaaatcaaagattggtacaatcagtttttaaggtcttcaaattgcttagagttttgaggtttgaaaatatgtgtacagacgtagagttgccaagtgacattgggaatatggttcatctaaggttcctgagcctaaggcgttgtcatataaaacggttgccattgtccatagggaatttgaagagcatgcaaactctagatcttagatttcgtcaactagatattgttccaaatgtgctatggaagatggaacaactgagacacttgtatttacccctgtactaccgtgcaagtggtaaactgcggcttgatactcttcactatttgcagaccttactgcatgttgacaattctcacttgaatgatattactgaactaaccaatcttaaaaaattggctgtgcaagtgtcgagccccttgaagaatctggagaaggtattaacatctacaagcagcacacttgagcgcatcagagttaccaaaagaccttcagggctatccaaatctcaccaagttgtggttgtgtcgttgctttctaaaggagaatcaaatgtcagtactagagaagctgccaaacttaagaaatctttatctccaatccggtacgtttga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

535

Amino Acids

61.69

Weight (kDa)

9.46

Isoelectric Point (pI)

42.55

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	461
Acc36I	ACCTGC	2 cut(s)	329, 461
AccB7I	CCANNNNNTGG	1 cut(s)	1513
AccII	CGCG	1 cut(s)	157
AciI	CCGC	2 cut(s)	748, 1300
AclWI	GGATC	1 cut(s)	655
AcoI	YGGCCR	2 cut(s)	212, 949
AcsI	RAATTY	1 cut(s)	1171
AcuI	CTGAAG	1 cut(s)	1470
AfaI	GTAC	6 cut(s)	668, 1014, 1072, 1277, 1555, 1601
AfiI	CCNNNNNNNGG	1 cut(s)	1513
AflII	CTTAAG	1 cut(s)	1574
AflIII	ACRYGT	1 cut(s)	53
AluBI	AGCT	7 cut(s)	28, 110, 173, 257, 380, 672, 1565
AluI	AGCT	7 cut(s)	28, 110, 173, 257, 380, 672, 1565
Alw21I	GWGCWC	1 cut(s)	364
Alw26I	GTCTC	2 cut(s)	83, 1249
Alw44I	GTGCAC	1 cut(s)	360
AlwI	GGATC	1 cut(s)	655
AoxI	GGCC	3 cut(s)	212, 451, 949
ApaLI	GTGCAC	1 cut(s)	360
ApeKI	GCWGC	2 cut(s)	1449, 1565
ApoI	RAATTY	1 cut(s)	1171
AspLEI	GCGC	2 cut(s)	159, 1464
AspS9I	GGNCC	1 cut(s)	960
AsuHPI	GGTGA	4 cut(s)	142, 194, 967, 1496
AsuII	TTCGAA	1 cut(s)	883
AvaII	GGWCC	1 cut(s)	960
AxyI	CCTNAGG	3 cut(s)	555, 956, 1130
BaeGI	GKGCMC	1 cut(s)	364
BalI	TGGCCA	1 cut(s)	951
BanII	GRGCYC	1 cut(s)	1412
BbsI	GAAGAC	3 cut(s)	663, 892, 1024
Bbv12I	GWGCWC	1 cut(s)	364
BbvI	GCAGC	2 cut(s)	1461, 1552
BccI	CCATC	3 cut(s)	362, 592, 1237
BciVI	GTATCC	1 cut(s)	855
BcoDI	GTCTC	2 cut(s)	83, 1249
BfaI	CTAG	6 cut(s)	68, 377, 381, 1193, 1214, 1557
BfrI	CTTAAG	1 cut(s)	1574
BfuAI	ACCTGC	2 cut(s)	329, 461
BfuI	GTATCC	1 cut(s)	855
BglII	AGATCT	1 cut(s)	1195
BisI	GCNGC	4 cut(s)	748, 1301, 1450, 1566
BlsI	GCNGC	4 cut(s)	749, 1302, 1451, 1567
BmcAI	AGTACT	1 cut(s)	1555
Bme18I	GGWCC	1 cut(s)	960
BmgT120I	GGNCC	1 cut(s)	960
BmiI	GGNNCC	2 cut(s)	927, 1121
BmsI	GCATC	5 cut(s)	312, 485, 759, 981, 1473
BpiI	GAAGAC	3 cut(s)	663, 892, 1024
BpmI	CTGGAG	2 cut(s)	100, 1445
Bpu10I	CCTNAGC	1 cut(s)	1124
Bpu14I	TTCGAA	1 cut(s)	883
BpuEI	CTTGAG	2 cut(s)	697, 1478
BsaJI	CCNNGG	1 cut(s)	209
BsaWI	WCCGGW	1 cut(s)	1596
Bsc4I	CCNNNNNNNGG	1 cut(s)	1513
Bse1I	ACTGG	2 cut(s)	572, 992
Bse21I	CCTNAGG	3 cut(s)	555, 956, 1130
Bse3DI	GCAATG	1 cut(s)	846
BseDI	CCNNGG	1 cut(s)	209
BseGI	GGATG	5 cut(s)	16, 603, 750, 910, 996
BseLI	CCNNNNNNNGG	1 cut(s)	1513
BseMI	GCAATG	1 cut(s)	846
BseMII	CTCAG	4 cut(s)	546, 970, 1115, 1244
BseNI	ACTGG	2 cut(s)	572, 992
BseRI	GAGGAG	1 cut(s)	809
BseSI	GKGCMC	1 cut(s)	364
BseXI	GCAGC	2 cut(s)	1461, 1552
BsgI	GTGCAG	2 cut(s)	161, 357
Bsh1236I	CGCG	1 cut(s)	157
BshFI	GGCC	3 cut(s)	214, 453, 951
BsiHKAI	GWGCWC	1 cut(s)	364
BsiSI	CCGG	2 cut(s)	369, 1597
BslFI	GGGAC	1 cut(s)	110
BslI	CCNNNNNNNGG	1 cut(s)	1513
BsmAI	GTCTC	2 cut(s)	83, 1249
BsmFI	GGGAC	1 cut(s)	110
BsmI	GAATGC	1 cut(s)	412
BsnI	GGCC	3 cut(s)	214, 453, 951
Bsp119I	TTCGAA	1 cut(s)	883
Bsp1286I	GDGCHC	2 cut(s)	364, 1412
Bsp1407I	TGTACA	1 cut(s)	1070
Bsp143I	GATC	3 cut(s)	249, 647, 1195
BspACI	CCGC	2 cut(s)	748, 1300
BspANI	GGCC	3 cut(s)	214, 453, 951
BspCNI	CTCAG	4 cut(s)	547, 969, 1116, 1245
BspFNI	CGCG	1 cut(s)	157
BspLI	GGNNCC	2 cut(s)	927, 1121
BspMI	ACCTGC	2 cut(s)	329, 461
BspPI	GGATC	1 cut(s)	655
BspQI	GCTCTTC	1 cut(s)	1172
BspT104I	TTCGAA	1 cut(s)	883
BspTI	CTTAAG	1 cut(s)	1574
BsrDI	GCAATG	1 cut(s)	846
BsrGI	TGTACA	1 cut(s)	1070
BsrI	ACTGG	2 cut(s)	572, 992
BssECI	CCNNGG	1 cut(s)	209
BssMI	GATC	3 cut(s)	249, 647, 1195
Bst4CI	ACNGT	2 cut(s)	1152, 1283
Bst6I	CTCTTC	4 cut(s)	436, 786, 1172, 1317
BstAFI	CTTAAG	1 cut(s)	1574
BstAUI	TGTACA	1 cut(s)	1070
BstBI	TTCGAA	1 cut(s)	883
BstC8I	GCNNGC	2 cut(s)	180, 1184
BstDEI	CTNAG	8 cut(s)	555, 956, 1043, 1115, 1124, 1130, 1199, 1253
BstF5I	GGATG	5 cut(s)	16, 603, 750, 910, 996
BstFNI	CGCG	1 cut(s)	157
BstHHI	GCGC	2 cut(s)	159, 1464
BstKTI	GATC	3 cut(s)	252, 650, 1198
BstMAI	GTCTC	2 cut(s)	83, 1249
BstMBI	GATC	3 cut(s)	249, 647, 1195
BstMWI	GCNNNNNNNGC	2 cut(s)	179, 359
BstNSI	RCATGY	3 cut(s)	57, 1186, 1340
BstSLI	GKGCMC	1 cut(s)	364
BstUI	CGCG	1 cut(s)	157
BstV1I	GCAGC	2 cut(s)	1461, 1552
BstV2I	GAAGAC	3 cut(s)	663, 892, 1024
BstX2I	RGATCY	1 cut(s)	1195
BstXI	CCANNNNNNTGG	1 cut(s)	987
BstYI	RGATCY	1 cut(s)	1195
Bsu36I	CCTNAGG	3 cut(s)	555, 956, 1130
BsuI	GTATCC	1 cut(s)	855
BsuRI	GGCC	3 cut(s)	214, 453, 951
BtsCI	GGATG	5 cut(s)	16, 603, 750, 910, 996
BtsI	GCAGTG	1 cut(s)	417
BtsIMutI	CAGTG	3 cut(s)	364, 417, 579
BveI	ACCTGC	2 cut(s)	329, 461
Cac8I	GCNNGC	2 cut(s)	180, 1184
CfoI	GCGC	2 cut(s)	159, 1464
Cfr13I	GGNCC	1 cut(s)	960
Csp6I	GTAC	6 cut(s)	667, 1013, 1071, 1276, 1554, 1600
CviAII	CATG	9 cut(s)	54, 93, 122, 455, 480, 528, 755, 1183, 1337
CviQI	GTAC	6 cut(s)	667, 1013, 1071, 1276, 1554, 1600
DdeI	CTNAG	8 cut(s)	555, 956, 1043, 1115, 1124, 1130, 1199, 1253
DpnI	GATC	3 cut(s)	251, 649, 1197
DpnII	GATC	3 cut(s)	249, 647, 1195
DraI	TTTAAA	1 cut(s)	522
EaeI	YGGCCR	2 cut(s)	212, 949
Eam1104I	CTCTTC	4 cut(s)	436, 786, 1172, 1317
EarI	CTCTTC	4 cut(s)	436, 786, 1172, 1317
Eco24I	GRGCYC	1 cut(s)	1412
Eco47I	GGWCC	1 cut(s)	960
Eco57I	CTGAAG	1 cut(s)	1470
Eco81I	CCTNAGG	3 cut(s)	555, 956, 1130
EcoO109I	RGGNCCY	1 cut(s)	960
EcoT38I	GRGCYC	1 cut(s)	1412
FaeI	CATG	9 cut(s)	57, 96, 125, 458, 483, 531, 758, 1186, 1340
FalI	AAGNNNNNCTT	2 cut(s)	183, 215
FaqI	GGGAC	1 cut(s)	110
FatI	CATG	9 cut(s)	53, 92, 121, 454, 479, 527, 754, 1182, 1336
Fnu4HI	GCNGC	4 cut(s)	748, 1301, 1450, 1566
FokI	GGATG	5 cut(s)	23, 610, 737, 917, 1003
FriOI	GRGCYC	1 cut(s)	1412
Fsp4HI	GCNGC	4 cut(s)	748, 1301, 1450, 1566
FspBI	CTAG	6 cut(s)	68, 377, 381, 1193, 1214, 1557
GlaI	GCGC	2 cut(s)	158, 1463
GluI	GCNGC	4 cut(s)	748, 1301, 1450, 1566
GsuI	CTGGAG	2 cut(s)	100, 1445
HaeIII	GGCC	3 cut(s)	214, 453, 951
HapII	CCGG	2 cut(s)	369, 1597
HhaI	GCGC	2 cut(s)	159, 1464
Hin1II	CATG	9 cut(s)	57, 96, 125, 458, 483, 531, 758, 1186, 1340
Hin6I	GCGC	2 cut(s)	157, 1462
HinP1I	GCGC	2 cut(s)	157, 1462
HincII	GTYRAC	3 cut(s)	817, 1211, 1342
HindII	GTYRAC	3 cut(s)	817, 1211, 1342
HindIII	AAGCTT	1 cut(s)	26
HinfI	GANTC	5 cut(s)	98, 224, 586, 1420, 1541
HpaI	GTTAAC	1 cut(s)	817
HpaII	CCGG	2 cut(s)	369, 1597
HphI	GGTGA	4 cut(s)	142, 194, 967, 1496
Hpy166II	GTNNAC	6 cut(s)	362, 817, 1071, 1211, 1295, 1342
Hpy188I	TCNGA	2 cut(s)	229, 1469
Hpy188III	TCNNGA	7 cut(s)	68, 79, 284, 554, 1123, 1193, 1424
Hpy8I	GTNNAC	6 cut(s)	362, 817, 1071, 1211, 1295, 1342
HpyAV	CCTTC	6 cut(s)	261, 599, 815, 858, 1423, 1494
HpyCH4III	ACNGT	2 cut(s)	1152, 1283
HpyCH4IV	ACGT	2 cut(s)	1077, 1602
HpyF10VI	GCNNNNNNNGC	2 cut(s)	179, 359
HpyF3I	CTNAG	8 cut(s)	555, 956, 1043, 1115, 1124, 1130, 1199, 1253
HpySE526I	ACGT	2 cut(s)	1077, 1602
Hsp92II	CATG	9 cut(s)	57, 96, 125, 458, 483, 531, 758, 1186, 1340
HspAI	GCGC	2 cut(s)	157, 1462
KspAI	GTTAAC	1 cut(s)	817
Kzo9I	GATC	3 cut(s)	249, 647, 1195
LguI	GCTCTTC	1 cut(s)	1172
Lsp1109I	GCAGC	2 cut(s)	1461, 1552
LweI	GCATC	5 cut(s)	312, 485, 759, 981, 1473
MaeI	CTAG	6 cut(s)	68, 377, 381, 1193, 1214, 1557
MaeII	ACGT	2 cut(s)	1077, 1602
MaeIII	GTNAC	3 cut(s)	545, 1091, 1471
MalI	GATC	3 cut(s)	251, 649, 1197
MboI	GATC	3 cut(s)	249, 647, 1195
MfeI	CAATTG	2 cut(s)	239, 393
MflI	RGATCY	1 cut(s)	1195
MhlI	GDGCHC	2 cut(s)	364, 1412
MlsI	TGGCCA	1 cut(s)	951
MluNI	TGGCCA	1 cut(s)	951
MlyI	GAGTC	3 cut(s)	92, 218, 580
MnlI	CCTC	8 cut(s)	219, 265, 437, 550, 787, 829, 965, 1047
Mox20I	TGGCCA	1 cut(s)	951
MscI	TGGCCA	1 cut(s)	951
MseI	TTAA	8 cut(s)	521, 738, 782, 816, 1026, 1383, 1436, 1575
MslI	CAYNNNNRTG	3 cut(s)	420, 903, 1356
Msp20I	TGGCCA	1 cut(s)	951
MspCI	CTTAAG	1 cut(s)	1574
MspI	CCGG	2 cut(s)	369, 1597
MunI	CAATTG	2 cut(s)	239, 393
Mva1269I	GAATGC	1 cut(s)	412
MvnI	CGCG	1 cut(s)	157
MwoI	GCNNNNNNNGC	2 cut(s)	179, 359
NdeII	GATC	3 cut(s)	249, 647, 1195
NlaIII	CATG	9 cut(s)	57, 96, 125, 458, 483, 531, 758, 1186, 1340
NlaIV	GGNNCC	2 cut(s)	927, 1121
NmeAIII	GCCGAG	1 cut(s)	190
NmuCI	GTSAC	2 cut(s)	545, 1091
NspI	RCATGY	3 cut(s)	57, 1186, 1340
NspV	TTCGAA	1 cut(s)	883
PaeI	GCATGC	1 cut(s)	1186
PaqCI	CACCTGC	1 cut(s)	461
PciI	ACATGT	1 cut(s)	53
PciSI	GCTCTTC	1 cut(s)	1172
PctI	GAATGC	1 cut(s)	412
PfeI	GAWTC	2 cut(s)	1420, 1541
PflMI	CCANNNNNTGG	1 cut(s)	1513
PkrI	GCNGC	4 cut(s)	749, 1302, 1451, 1567
PleI	GAGTC	3 cut(s)	92, 218, 580
PpsI	GAGTC	3 cut(s)	92, 218, 580
PpuMI	RGGWCCY	1 cut(s)	960
PscI	ACATGT	1 cut(s)	53
Psp5II	RGGWCCY	1 cut(s)	960
PspN4I	GGNNCC	2 cut(s)	927, 1121
PspPI	GGNCC	1 cut(s)	960
PspPPI	RGGWCCY	1 cut(s)	960
PsuI	RGATCY	1 cut(s)	1195
RsaI	GTAC	6 cut(s)	668, 1014, 1072, 1277, 1555, 1601
RsaNI	GTAC	6 cut(s)	667, 1013, 1071, 1276, 1554, 1600
RseI	CAYNNNNRTG	3 cut(s)	420, 903, 1356
SapI	GCTCTTC	1 cut(s)	1172
SaqAI	TTAA	8 cut(s)	521, 738, 782, 816, 1026, 1383, 1436, 1575
SatI	GCNGC	4 cut(s)	748, 1301, 1450, 1566
Sau3AI	GATC	3 cut(s)	249, 647, 1195
Sau96I	GGNCC	1 cut(s)	960
ScaI	AGTACT	1 cut(s)	1555
SchI	GAGTC	3 cut(s)	92, 218, 580
SduI	GDGCHC	2 cut(s)	364, 1412
SfaNI	GCATC	5 cut(s)	312, 485, 759, 981, 1473
SfuI	TTCGAA	1 cut(s)	883
SinI	GGWCC	1 cut(s)	960
SmiMI	CAYNNNNRTG	3 cut(s)	420, 903, 1356
SmlI	CTYRAG	3 cut(s)	676, 1457, 1574
SmoI	CTYRAG	3 cut(s)	676, 1457, 1574
SphI	GCATGC	1 cut(s)	1186
SsiI	CCGC	2 cut(s)	748, 1300
SspI	AATATT	1 cut(s)	144
SspMI	CTAG	6 cut(s)	68, 377, 381, 1193, 1214, 1557
TaaI	ACNGT	2 cut(s)	1152, 1283
TaiI	ACGT	2 cut(s)	1080, 1605
TaqI	TCGA	2 cut(s)	883, 1406
TatI	WGTACW	3 cut(s)	1070, 1275, 1553
TauI	GCSGC	2 cut(s)	750, 1303
TfiI	GAWTC	2 cut(s)	1420, 1541
Tru1I	TTAA	8 cut(s)	521, 738, 782, 816, 1026, 1383, 1436, 1575
Tru9I	TTAA	8 cut(s)	521, 738, 782, 816, 1026, 1383, 1436, 1575
TscAI	CASTG	3 cut(s)	364, 417, 579
TseFI	GTSAC	2 cut(s)	545, 1091
TseI	GCWGC	2 cut(s)	1449, 1565
Tsp45I	GTSAC	2 cut(s)	545, 1091
TspDTI	ATGAA	7 cut(s)	20, 27, 317, 471, 631, 954, 1100
TspRI	CASTG	3 cut(s)	364, 417, 579
Van91I	CCANNNNNTGG	1 cut(s)	1513
Vha464I	CTTAAG	1 cut(s)	1574
VneI	GTGCAC	1 cut(s)	360
VpaK11BI	GGWCC	1 cut(s)	960
XapI	RAATTY	1 cut(s)	1171
XbaI	TCTAGA	2 cut(s)	67, 1192
XceI	RCATGY	3 cut(s)	57, 1186, 1340
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1233
XspI	CTAG	6 cut(s)	68, 377, 381, 1193, 1214, 1557
ZrmI	AGTACT	1 cut(s)	1555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.