RchiOBHm_Chr1g0345551

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
37881542 .. 37884751
3210 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57187

Sequence Viewer

Length: 1908 bp
ATGCTTGTACATTGTCCAGGTTTGCCAATAGTCATTAGAGTGCTTGCTGGTCTTCTAAGTAAACGAGAGACAGTTAAAGAGTGGGATGCAGTACTTGAAAATGTTGAACAGATAATGAAAGGCACAGATGTCCTTGAAACAGAAAGTACAAGTCAAGAGTATGGGATATCGGTTGTTTTGGCATTGAGTTATGATGACTTGCCATCTCACTTAAAACTATGCTTTCTATATTTAGCTCAATTTCCTGAGAATCATGAGATAGCGGTGACGAGATTGACACAATTATGGATTGCAGAAGGGTTTATAACTTTAATGGCAGAAAAACATGGTTCTGGTGAAATAATGGAAGACGTATCATACAGTTGCCTCACTGAATTGATTGGAAGACAAATGGTTCAAGATGTGATATATGGTTTCAGTGGGAAGGTGAAATCTTGCCGCCTCCATGGTCTTATGCGAGACTTTTGCTTGCAGAAGGCAGAAGAGGAGAATTTTCGCATATTTGTTAAGCTCTCTGAAGGTCCGGTATCTAAGACTGCACTAATCGGTAAGGTCCGAAGACTTACCCTCTATTTGGACAATACGGTCAAATATGAGTTCACGAGGGAAGGAAGATATGGCCACGTTAGGTCTTTATTATACTTTGTCCCAGCAAGCCATTACCAAAAGTGGGACAAAAAAGTAATAAGATCAGCATTCAATGACTTTAAATTCCTTAGGGTGTTGAAGTTTGAAAATATTGGTAGAGAATTTGAGATACCGAAGACGATTGGGAATCTAGTCCATTTGAGGTTTCTGAGTCTGAAGGATAGTGCATTTCGTGGGTTGCCATCATCTGTATCTAATCTGGTTCTTTTGCAAACTCTAGACCTGCGGTCGAATTTTGTAGGTCAAGGATCTTGTTTTGGGAGAATGAGAGGAACCGAAATCAGAAATGTGTTTTGGAATATGAAGCAACTGAGGCATTTGTATATACCTTTTTTTCACTCTGTAAGTGCTCCGAAACTGTCATTTGCAAGGCTGTGCAATTTGCAGACGTTGGTCAATGTTCCAATTGAGAAGTGTGATTTGAATGATCTTGTTCAATTAAGCAATCTGAAGAAACTACGCATAATGCCATCAGCGTCTCGTCAGTTGGAAAAGCTGAAGGACATGTTGATAATAAGGAATAGAACATATAAACATCTTCGGTCTCTATCTCTGCAGGCTGATGGGGATATACCAAGTGATATAGTATTAACGTGTCCTCATTTATACAAGCTGCGACTGGAGGGGAAAATGACAGCGTTGCCGAAAGAGCTTCCAAACCTCACCAAGTTAACGCTGGAACAAACAAAACTGAAGGATGACCAGATTGAAATACTGGAGAAGCTGCCCAACTTAAGGGTGCTTTACCTCGGTTGGCGTTCTTTCGAATCAGAAACATTGGTTTTCTCCCAAGAAGGCTTTCCTCATCTGGAATTTCTTACCCTTTATGGATTGTATGATTTGAAGGAGTGGAGGGTGAAGAAAGAAGCCATGCCTCGTCTTCAGAGATTGCGCATTGAATGGTGCAAACAATTGCAGGCAGTTCCAGATGGGCTTCAGGAGATTACTACCCTCAAGGAATTAACAATTGACCGGATGCCCAGTAGATTCTGCAGTAGGGTTGGGAAAGGAGGAAAGGATTTCTACAAAATCAAACACGTGCCTTCTCTTATAATAACAGATATTCAACCCGACTACAAGAAAGACAAGGAGCCAGAAATGGAGGAAGCAACAGGCGCGTCTCAAATAGTTGCGGGTCCAGCTGATGACTCTCATCAGGAATCAATTGTGGACGCTCCTCCTCCTCCTCCTCCTCCTACTATTGTTGATGAGAAAGCAGAGGAAATACAAGTTGCATCCTCTGCTGACCACCTCAGTTAA

Protein Analysis

635

Amino Acids

72.74

Weight (kDa)

8.44

Isoelectric Point (pI)

45.6

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 81 - 155 1.5e-15 Disease resistance protein Winged helix domain
LRR_14 PF23598 209 - 540 2.6e-39 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 305, 1700
AasI GACNNNNNNGTC 1 cut(s) 584
Acc16I TGCGCA 1 cut(s) 1541
Acc36I ACCTGC 1 cut(s) 879
AccII CGCG 1 cut(s) 1766
AciI CCGC 4 cut(s) 263, 439, 874, 1781
AclWI GGATC 1 cut(s) 904
AcoI YGGCCR 1 cut(s) 619
AcsI RAATTY 5 cut(s) 490, 710, 749, 880, 1460
AcuI CTGAAG 7 cut(s) 537, 824, 1118, 1166, 1361, 1514, 1568
AcvI CACGTG 1 cut(s) 1687
AfaI GTAC 3 cut(s) 9, 93, 148
AfiI CCNNNNNNNGG 3 cut(s) 574, 670, 1383
AflII CTTAAG 1 cut(s) 1381
AflIII ACRYGT 3 cut(s) 1152, 1241, 1684
AhdI GACNNNNNGTC 1 cut(s) 874
AjnI CCWGG 1 cut(s) 16
AjuI GAANNNNNNNTTGG 4 cut(s) 925, 957, 1431, 1463
AluBI AGCT 7 cut(s) 236, 511, 1144, 1261, 1300, 1372, 1790
AluI AGCT 7 cut(s) 236, 511, 1144, 1261, 1300, 1372, 1790
Alw21I GWGCWC 1 cut(s) 1000
Alw26I GTCTC 5 cut(s) 62, 453, 1131, 1197, 1773
AlwI GGATC 1 cut(s) 904
AoxI GGCC 1 cut(s) 619
ApeKI GCWGC 2 cut(s) 1261, 1372
ApoI RAATTY 5 cut(s) 490, 710, 749, 880, 1460
Asp700I GAANNNNTTC 1 cut(s) 1446
AspLEI GCGC 2 cut(s) 1542, 1766
AspS9I GGNCC 3 cut(s) 521, 553, 1784
AsuHPI GGTGA 5 cut(s) 277, 347, 439, 1303, 1516
AsuII TTCGAA 1 cut(s) 1413
AvaII GGWCC 3 cut(s) 521, 553, 1784
AxyI CCTNAGG 1 cut(s) 716
BalI TGGCCA 1 cut(s) 621
BauI CACGAG 1 cut(s) 601
BbrPI CACGTG 1 cut(s) 1687
BbsI GAAGAC 6 cut(s) 44, 354, 391, 565, 770, 1520
Bbv12I GWGCWC 1 cut(s) 1000
BbvI GCAGC 2 cut(s) 1248, 1359
BccI CCATC 5 cut(s) 211, 838, 1126, 1205, 1571
BcgI CGANNNNNNTGC 2 cut(s) 447, 481
BciT130I CCWGG 1 cut(s) 18
BcoDI GTCTC 5 cut(s) 62, 453, 1131, 1197, 1773
BfaI CTAG 2 cut(s) 779, 866
BfmI CTRYAG 2 cut(s) 1202, 1639
BfrI CTTAAG 1 cut(s) 1381
BfuAI ACCTGC 1 cut(s) 879
BisI GCNGC 3 cut(s) 439, 1262, 1373
BlsI GCNGC 3 cut(s) 440, 1263, 1374
BmcAI AGTACT 1 cut(s) 93
Bme1390I CCNGG 1 cut(s) 18
Bme18I GGWCC 3 cut(s) 521, 553, 1784
BmeRI GACNNNNNGTC 1 cut(s) 874
BmgT120I GGNCC 3 cut(s) 521, 553, 1784
BmiI GGNNCC 3 cut(s) 922, 1740, 1785
BmrFI CCNGG 1 cut(s) 18
BmrI ACTGGG 1 cut(s) 1623
BmsI GCATC 3 cut(s) 76, 1614, 1892
BmuI ACTGGG 1 cut(s) 1623
BoxI GACNNNNGTC 1 cut(s) 1040
BpiI GAAGAC 6 cut(s) 44, 354, 391, 565, 770, 1520
BpmI CTGGAG 2 cut(s) 1289, 1385
Bpu14I TTCGAA 1 cut(s) 1413
BpuEI CTTGAG 1 cut(s) 1586
BsaAI YACGTR 1 cut(s) 1687
BsaI GGTCTC 1 cut(s) 1197
BsaJI CCNNGG 2 cut(s) 445, 1396
BsaWI WCCGGW 2 cut(s) 523, 1620
Bsc4I CCNNNNNNNGG 3 cut(s) 574, 670, 1383
Bse1I ACTGG 3 cut(s) 1272, 1368, 1629
Bse21I CCTNAGG 1 cut(s) 716
BseBI CCWGG 1 cut(s) 18
BseDI CCNNGG 2 cut(s) 445, 1396
BseGI GGATG 4 cut(s) 91, 1351, 1629, 1883
BseLI CCNNNNNNNGG 3 cut(s) 574, 670, 1383
BseMII CTCAG 3 cut(s) 237, 788, 950
BseNI ACTGG 3 cut(s) 1272, 1368, 1629
BseRI GAGGAG 7 cut(s) 500, 1815, 1818, 1821, 1824, 1827, 1830
BseXI GCAGC 2 cut(s) 1248, 1359
BseYI CCCAGC 1 cut(s) 649
BsgI GTGCAG 1 cut(s) 522
Bsh1236I CGCG 1 cut(s) 1766
Bsh1285I CGRYCG 1 cut(s) 878
BshFI GGCC 1 cut(s) 621
BsiEI CGRYCG 1 cut(s) 878
BsiHKAI GWGCWC 1 cut(s) 1000
BsiSI CCGG 2 cut(s) 524, 1621
BslFI GGGAC 2 cut(s) 632, 686
BslI CCNNNNNNNGG 3 cut(s) 574, 670, 1383
BsmAI GTCTC 5 cut(s) 62, 453, 1131, 1197, 1773
BsmBI CGTCTC 2 cut(s) 1131, 1773
BsmFI GGGAC 2 cut(s) 632, 686
BsmI GAATGC 1 cut(s) 695
BsnI GGCC 1 cut(s) 621
Bso31I GGTCTC 1 cut(s) 1197
Bsp119I TTCGAA 1 cut(s) 1413
Bsp1286I GDGCHC 1 cut(s) 1000
Bsp1407I TGTACA 1 cut(s) 7
Bsp143I GATC 3 cut(s) 689, 896, 1075
Bsp19I CCATGG 1 cut(s) 445
BspACI CCGC 4 cut(s) 263, 439, 874, 1781
BspANI GGCC 1 cut(s) 621
BspCNI CTCAG 3 cut(s) 238, 789, 951
BspFNI CGCG 1 cut(s) 1766
BspHI TCATGA 1 cut(s) 253
BspLI GGNNCC 3 cut(s) 922, 1740, 1785
BspMAI CTGCAG 2 cut(s) 1206, 1643
BspMI ACCTGC 1 cut(s) 879
BspPI GGATC 1 cut(s) 904
BspT104I TTCGAA 1 cut(s) 1413
BspTI CTTAAG 1 cut(s) 1381
BspTNI GGTCTC 1 cut(s) 1197
BsrGI TGTACA 1 cut(s) 7
BsrI ACTGG 3 cut(s) 1272, 1368, 1629
BssECI CCNNGG 2 cut(s) 445, 1396
BssMI GATC 3 cut(s) 689, 896, 1075
BssSI CACGAG 1 cut(s) 601
BssT1I CCWWGG 1 cut(s) 445
Bst2BI CACGAG 1 cut(s) 601
Bst2UI CCWGG 1 cut(s) 18
Bst4CI ACNGT 4 cut(s) 73, 362, 586, 1008
Bst6I CTCTTC 1 cut(s) 477
BstAFI CTTAAG 1 cut(s) 1381
BstAPI GCANNNNNTGC 1 cut(s) 1889
BstAUI TGTACA 1 cut(s) 7
BstBAI YACGTR 1 cut(s) 1687
BstBI TTCGAA 1 cut(s) 1413
BstC8I GCNNGC 5 cut(s) 45, 470, 655, 1206, 1566
BstDEI CTNAG 7 cut(s) 56, 246, 531, 716, 797, 959, 1901
BstDSI CCRYGG 1 cut(s) 445
BstF5I GGATG 4 cut(s) 91, 1351, 1629, 1883
BstFNI CGCG 1 cut(s) 1766
BstHHI GCGC 2 cut(s) 1542, 1766
BstKTI GATC 3 cut(s) 692, 899, 1078
BstMAI GTCTC 5 cut(s) 62, 453, 1131, 1197, 1773
BstMBI GATC 3 cut(s) 689, 896, 1075
BstMCI CGRYCG 1 cut(s) 878
BstMWI GCNNNNNNNGC 5 cut(s) 961, 1297, 1763, 1787, 1889
BstNI CCWGG 1 cut(s) 18
BstNSI RCATGY 1 cut(s) 1156
BstPAI GACNNNNGTC 1 cut(s) 1040
BstSCI CCNGG 1 cut(s) 16
BstSFI CTRYAG 2 cut(s) 1202, 1639
BstUI CGCG 1 cut(s) 1766
BstV1I GCAGC 2 cut(s) 1248, 1359
BstV2I GAAGAC 6 cut(s) 44, 354, 391, 565, 770, 1520
BstX2I RGATCY 1 cut(s) 896
BstYI RGATCY 1 cut(s) 896
Bsu36I CCTNAGG 1 cut(s) 716
BsuRI GGCC 1 cut(s) 621
BtgI CCRYGG 1 cut(s) 445
BtsCI GGATG 4 cut(s) 91, 1351, 1629, 1883
BtsIMutI CAGTG 2 cut(s) 369, 424
BveI ACCTGC 1 cut(s) 879
Cac8I GCNNGC 5 cut(s) 45, 470, 655, 1206, 1566
CciI TCATGA 1 cut(s) 253
CfoI GCGC 2 cut(s) 1542, 1766
Cfr13I GGNCC 3 cut(s) 521, 553, 1784
CseI GACGC 3 cut(s) 1113, 1755, 1829
Csp6I GTAC 3 cut(s) 8, 92, 147
CviAII CATG 5 cut(s) 254, 326, 446, 1153, 1519
CviQI GTAC 3 cut(s) 8, 92, 147
DdeI CTNAG 7 cut(s) 56, 246, 531, 716, 797, 959, 1901
DpnI GATC 3 cut(s) 691, 898, 1077
DpnII GATC 3 cut(s) 689, 896, 1075
DraI TTTAAA 1 cut(s) 709
DrdI GACNNNNNNGTC 1 cut(s) 584
DriI GACNNNNNGTC 1 cut(s) 874
DseDI GACNNNNNNGTC 1 cut(s) 584
EaeI YGGCCR 1 cut(s) 619
Eam1104I CTCTTC 1 cut(s) 477
Eam1105I GACNNNNNGTC 1 cut(s) 874
EarI CTCTTC 1 cut(s) 477
Eco130I CCWWGG 1 cut(s) 445
Eco31I GGTCTC 1 cut(s) 1197
Eco32I GATATC 1 cut(s) 168
Eco47I GGWCC 3 cut(s) 521, 553, 1784
Eco57I CTGAAG 7 cut(s) 537, 824, 1118, 1166, 1361, 1514, 1568
Eco72I CACGTG 1 cut(s) 1687
Eco81I CCTNAGG 1 cut(s) 716
EcoRII CCWGG 1 cut(s) 16
EcoRV GATATC 1 cut(s) 168
EcoT14I CCWWGG 1 cut(s) 445
ErhI CCWWGG 1 cut(s) 445
Esp3I CGTCTC 2 cut(s) 1131, 1773
FaeI CATG 5 cut(s) 257, 329, 449, 1156, 1522
FaqI GGGAC 2 cut(s) 632, 686
FatI CATG 5 cut(s) 253, 325, 445, 1152, 1518
FauI CCCGC 1 cut(s) 1774
Fnu4HI GCNGC 3 cut(s) 439, 1262, 1373
FokI GGATG 4 cut(s) 98, 1358, 1636, 1870
Fsp4HI GCNGC 3 cut(s) 439, 1262, 1373
FspBI CTAG 2 cut(s) 779, 866
FspI TGCGCA 1 cut(s) 1541
GlaI GCGC 2 cut(s) 1541, 1765
GluI GCNGC 3 cut(s) 439, 1262, 1373
GsaI CCCAGC 1 cut(s) 653
GsuI CTGGAG 2 cut(s) 1289, 1385
HaeIII GGCC 1 cut(s) 621
HapII CCGG 2 cut(s) 524, 1621
HgaI GACGC 3 cut(s) 1113, 1755, 1829
HhaI GCGC 2 cut(s) 1542, 1766
Hin1II CATG 5 cut(s) 257, 329, 449, 1156, 1522
Hin6I GCGC 2 cut(s) 1540, 1764
HinP1I GCGC 2 cut(s) 1540, 1764
HincII GTYRAC 1 cut(s) 1320
HindII GTYRAC 1 cut(s) 1320
HinfI GANTC 7 cut(s) 250, 775, 799, 1415, 1635, 1796, 1808
HpaI GTTAAC 1 cut(s) 1320
HpaII CCGG 2 cut(s) 524, 1621
HphI GGTGA 5 cut(s) 277, 347, 439, 1303, 1516
Hpy166II GTNNAC 4 cut(s) 62, 600, 1320, 1819
Hpy188I TCNGA 9 cut(s) 517, 557, 798, 804, 932, 1002, 1098, 1420, 1533
Hpy8I GTNNAC 4 cut(s) 62, 600, 1320, 1819
HpyCH4III ACNGT 4 cut(s) 73, 362, 586, 1008
HpyCH4IV ACGT 5 cut(s) 351, 624, 1037, 1241, 1686
HpyF10VI GCNNNNNNNGC 5 cut(s) 961, 1297, 1763, 1787, 1889
HpyF3I CTNAG 7 cut(s) 56, 246, 531, 716, 797, 959, 1901
HpySE526I ACGT 5 cut(s) 351, 624, 1037, 1241, 1686
Hsp92II CATG 5 cut(s) 257, 329, 449, 1156, 1522
HspAI GCGC 2 cut(s) 1540, 1764
KspAI GTTAAC 1 cut(s) 1320
Kzo9I GATC 3 cut(s) 689, 896, 1075
LmnI GCTCC 3 cut(s) 1003, 1738, 1828
Lsp1109I GCAGC 2 cut(s) 1248, 1359
LweI GCATC 3 cut(s) 76, 1614, 1892
MaeI CTAG 2 cut(s) 779, 866
MaeII ACGT 5 cut(s) 351, 624, 1037, 1241, 1686
MaeIII GTNAC 1 cut(s) 265
MalI GATC 3 cut(s) 691, 898, 1077
MboI GATC 3 cut(s) 689, 896, 1075
MfeI CAATTG 4 cut(s) 1053, 1559, 1614, 1812
MflI RGATCY 1 cut(s) 896
MhlI GDGCHC 1 cut(s) 1000
MlsI TGGCCA 1 cut(s) 621
MluNI TGGCCA 1 cut(s) 621
MlyI GAGTC 2 cut(s) 808, 1790
MmeI TCCRAC 1 cut(s) 1116
Mox20I TGGCCA 1 cut(s) 621
MroXI GAANNNNTTC 1 cut(s) 1446
MscI TGGCCA 1 cut(s) 621
MslI CAYNNNNRTG 2 cut(s) 38, 283
Msp20I TGGCCA 1 cut(s) 621
MspA1I CMGCKG 1 cut(s) 1790
MspCI CTTAAG 1 cut(s) 1381
MspI CCGG 2 cut(s) 524, 1621
MspR9I CCNGG 1 cut(s) 18
MunI CAATTG 4 cut(s) 1053, 1559, 1614, 1812
Mva1269I GAATGC 1 cut(s) 695
MvaI CCWGG 1 cut(s) 18
MvnI CGCG 1 cut(s) 1766
MwoI GCNNNNNNNGC 5 cut(s) 961, 1297, 1763, 1787, 1889
NcoI CCATGG 1 cut(s) 445
NdeII GATC 3 cut(s) 689, 896, 1075
NlaIII CATG 5 cut(s) 257, 329, 449, 1156, 1522
NlaIV GGNNCC 3 cut(s) 922, 1740, 1785
NmuCI GTSAC 1 cut(s) 265
NsbI TGCGCA 1 cut(s) 1541
NspI RCATGY 1 cut(s) 1156
NspV TTCGAA 1 cut(s) 1413
PagI TCATGA 1 cut(s) 253
PciI ACATGT 1 cut(s) 1152
PctI GAATGC 1 cut(s) 695
PdmI GAANNNNTTC 1 cut(s) 1446
PfeI GAWTC 5 cut(s) 250, 775, 1415, 1635, 1808
PkrI GCNGC 3 cut(s) 440, 1263, 1374
PleI GAGTC 2 cut(s) 807, 1790
PmaCI CACGTG 1 cut(s) 1687
PmlI CACGTG 1 cut(s) 1687
PpsI GAGTC 2 cut(s) 807, 1790
Ppu21I YACGTR 1 cut(s) 1687
PscI ACATGT 1 cut(s) 1152
PshAI GACNNNNGTC 1 cut(s) 1040
PsiI TTATAA 2 cut(s) 305, 1700
Psp6I CCWGG 1 cut(s) 16
PspCI CACGTG 1 cut(s) 1687
PspFI CCCAGC 1 cut(s) 649
PspGI CCWGG 1 cut(s) 16
PspN4I GGNNCC 3 cut(s) 922, 1740, 1785
PspPI GGNCC 3 cut(s) 521, 553, 1784
PstI CTGCAG 2 cut(s) 1206, 1643
PsuI RGATCY 1 cut(s) 896
PvuII CAGCTG 1 cut(s) 1790
RsaI GTAC 3 cut(s) 9, 93, 148
RsaNI GTAC 3 cut(s) 8, 92, 147
RseI CAYNNNNRTG 2 cut(s) 38, 283
SatI GCNGC 3 cut(s) 439, 1262, 1373
Sau3AI GATC 3 cut(s) 689, 896, 1075
Sau96I GGNCC 3 cut(s) 521, 553, 1784
ScaI AGTACT 1 cut(s) 93
SchI GAGTC 2 cut(s) 808, 1790
ScrFI CCNGG 1 cut(s) 18
SduI GDGCHC 1 cut(s) 1000
SfaNI GCATC 3 cut(s) 76, 1614, 1892
SfcI CTRYAG 2 cut(s) 1202, 1639
SfuI TTCGAA 1 cut(s) 1413
SinI GGWCC 3 cut(s) 521, 553, 1784
SmiMI CAYNNNNRTG 2 cut(s) 38, 283
SmlI CTYRAG 2 cut(s) 1381, 1601
SmoI CTYRAG 2 cut(s) 1381, 1601
SsiI CCGC 4 cut(s) 263, 439, 874, 1781
SspI AATATT 1 cut(s) 739
SspMI CTAG 2 cut(s) 779, 866
StyD4I CCNGG 1 cut(s) 16
StyI CCWWGG 1 cut(s) 445
TaaI ACNGT 4 cut(s) 73, 362, 586, 1008
TaiI ACGT 5 cut(s) 354, 627, 1040, 1244, 1689
TaqI TCGA 2 cut(s) 878, 1413
TaqII GACCGA 1 cut(s) 1179
TatI WGTACW 3 cut(s) 7, 91, 146
TauI GCSGC 1 cut(s) 441
TfiI GAWTC 5 cut(s) 250, 775, 1415, 1635, 1808
TscAI CASTG 2 cut(s) 376, 424
TseFI GTSAC 1 cut(s) 265
TseI GCWGC 2 cut(s) 1261, 1372
Tsp45I GTSAC 1 cut(s) 265
TspDTI ATGAA 2 cut(s) 131, 965
TspRI CASTG 2 cut(s) 376, 424
Vha464I CTTAAG 1 cut(s) 1381
VpaK11BI GGWCC 3 cut(s) 521, 553, 1784
XapI RAATTY 5 cut(s) 490, 710, 749, 880, 1460
XbaI TCTAGA 1 cut(s) 865
XceI RCATGY 1 cut(s) 1156
XcmI CCANNNNNNNNNTGG 1 cut(s) 1321
XmnI GAANNNNTTC 1 cut(s) 1446
XspI CTAG 2 cut(s) 779, 866
ZrmI AGTACT 1 cut(s) 93
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.