RchiOBHm_Chr4g0394441

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Reverse (-)
10110750 .. 10116265
5516 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36694

Sequence Viewer

Length: 2853 bp
ATGGCTGAGGCTGTTGTTTCTTTTCTCGTGGAAAGAGTTGGTGACTACATCATTCAAGAAGGCAGATCCTTGTTCGGAGTTGGCAATCAAGTTAGGCGTGCACACAGAGACCTAGTATTCATCAAGGGCTTCCTCAAAGATGCAGACGCAAAGCGACGAGACAGTGAGGCAATACGCACTTTTGTTGCCGAAATTAGAGATGCTGCTTATGATTTGGAGGATGTCATTGAAGCTTTTGTCTTGAAGGTGGATTCCAGGAGGAAAGGAGGTATAAAGAATGTTTTGAAGAGGTTGGGGTCCATTTTCGTTGAAGGAGTTCTCCGTTACAAGATTGGGTCAGAAATTGGGGTAATTACTATCACGATTTCTGATTTGAAGCAGAACTTGCAAACTTATGGTATCAAGGAGATAAGTGATTCCTCTACTTCCCTACAATTGTGTGAAGCACAACAACTACTGAGGCGAACTTACACTCATGTTATTGATCGTAATGTGGTCGGGCTAGAGGATTCTGTCCATGAATTGGTTGGGCATTTGGTGAAGGAAGAGCATCGCCACCGAGTTGTTTCTATTATTGGGATGGGCGGATCCGGGAAGACAACTATTGCTAAACAAGTTTATCATCACAAAGAGGTAACAGACCATTTTGATTGTTTGGCTTGGGTTTGTATATCTCAACAATATCAAGTCAGGGATGTCTTGGAGAGGATTTATGTCAAACTTCTTTGCCCCACAAAAGAGGAGAGGGATGAAATTGCAAAATTGAAGGATGACGAAATACCAGGGAGGCTTTCTCGTCTCCAAAATGAACAAAAATGTTTGATTGTCCTTGATGACATTTGGAAAAGAGAGACCTGGGACTTGTTGAAGGCTGCATTTGAATGCCATGAAGACTCAAAGAGCAGGATACTACTTACGACACGCAATGAACAAGTAGCTTCGCATGCGGATGAGAACGGTTTTCGCTACCGACCTCCACCACTAACTGAGTCTGAGAGTTGGAAGCTGTTTGAGAAGATTGCAATGAGCGGAAGGAAAGCTGGAATAGGTGCTGAAGTTTACACGAAGATGGAAGAATTAGGAAAAGAGATGGTTCAACATTGTAAGGGTCTGCCACTAGCTATCATTGTACTTGCTGGACTTCTTGCTAGAAAAAACACAATTAAAGATTGGATAAACATACAAGAAAATGTTGGTGTTTACATAAGTAGAGGTTTTGGTCGCCAGGAAGAAGAACATGCATATGCATCATGGGTGTTGGCGTTGAGTTATGATGACTTGCCGTATCACTTAAAACCCTGTTTCCTATATTTAGGACATTTTCCAGAGGATCATGAGATCCAGGTGAAGAGTTTGACAAGATTATGGATCGCAGAAGGTTTTATCTTTTTGACACAACAAAGACAAGGTTCAAGGGAAACAATGGAGGATGTGGCATACAATTGGTTGAATGAGTTGGTAGAAAGGTGTGTGATTCAAGTAGGAGAGAGAAGTTCAACTCTTGAGAAAATTAAAAGTTGCCGGATGCATGATCTTTTGCGAGATTTGTGTTTGAGGAAGGCGGAAGAGGAAAATTTTCTCCAAGTTGTCAAAGGTTCCCATAAAAATGAGGCAATGCATCCCGTTTCTTCTTCCATGGTAACCATTGTATCACCTATGGGTAAGATTCGAAGACTTGCCATCTACTTGGATGAGAATGATGATAAATTGGTACCCTCAAGAGAGGAAAGAGGTGGGCAGCTTAGGTCTTTGTTATATTTTGGCCCCAATGATTATAATTGGTTTCCTAAACAGAAAGAATTAATACCTTCCATGTTCAAGGATTTCAAATTACTCAGAGTGTTGAGGATTGAAGGTATGAATGATAGAGAAGAAAAAATAGAGCTGCCTAGAGAAATTGGAAAAATGGTCCACTTGAGGTTTCTGAGTCTAAGGAGAAGTAATATAAGATCGTTTCCTCCTTTTCTAGGAAACTTGATTTGTTTGCAGACACTTGATTTCCGTGTTATAGATGACAACGACATGTTTATCCCAAATGTGATATGCAAGATGAATAAGTTGAGACATTTATACCTTCCATGGTATTACTGGGCTAGAGGTAAACTGCAGCTATCTACTCTCGGTGATTTGCTAACTTTAAATTCTGTTTCGAATGGATATTGTGATTGGAATGATCTTGCTAAACTAGGCAATCTAAGGAAACTGAGAATAAGATTGTCATCTAGCCAATCGAAAAATCTGGAGAAAATCTTGGATGCAGCAGGCTGCGTGCTCAACGGTATTCGGTCCCTGCGGTTGCACAACGAGGTTGGAGTGGAAAGCGGTGCAGAGGTTAGTCAAATAGTTGCAAGGTGCGGTCAAATATACAAGTTGGCGCTGACTGGGCCCACACTAGAACTACCCAAAGAGTTGTTCCACTCCCATTCAAACCTCACCAAGTTACTTTTGTCCAGTTGTGCTCTCAAGGACGACCAAATGGCCGTACTAGAGAAGCTGCCCAACCTGAAAAGTCTTGATCTGTGGAATTATGTGTTTGAGGAGGAAAATACAAAAGTATTGGTTTTCTCCGCTGGAAGCTTTCCTCGTCTTCAGTTTCTTAGACTTGTGAATTTGCTAGGAATAACGGAGTGGAGGGTGGAGGAAGGAGCCATGCCTTGTCTCTGCAAATTGGTCATTTATGATTGCAGAGGATTGAGTACGGTTCCAGATGGGCTGAGACACCTTACTACCCTCAAGGAATTGAAGATTCAGTATATGCCTAAACTATTCTGTAGTAAGCTTGAGGAAGGAGGAGAAGACTTCCATAAAGTCCAACACATCCCTTCCCTTATAATCCAGAATCCGAGGGGTTAA

Protein Analysis

950

Amino Acids

109.05

Weight (kDa)

8.19

Isoelectric Point (pI)

45.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 88 2.2e-19 Rx N-terminal domain
NB-ARC PF00931 169 - 344 2.1e-42 NB-ARC domain
WHD_DRP PF23559 441 - 517 4.7e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 594 - 918 2.1e-37 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1776, 2831
Acc65I GGTACC 1 cut(s) 1711
AccB1I GGYRCC 1 cut(s) 1711
AccB7I CCANNNNNTGG 1 cut(s) 523
AccBSI CCGCTC 1 cut(s) 1029
AciI CCGC 8 cut(s) 585, 947, 1029, 1562, 2293, 2322, 2355, 2568
AclWI GGATC 6 cut(s) 60, 582, 595, 1333, 1338, 1376
AcoI YGGCCR 1 cut(s) 2478
AcsI RAATTY 3 cut(s) 1573, 2140, 2608
AcuI CTGAAG 2 cut(s) 1074, 2573
AfaI GTAC 4 cut(s) 1131, 1713, 2484, 2698
AfiI CCNNNNNNNGG 2 cut(s) 523, 1967
AflIII ACRYGT 1 cut(s) 2022
AjnI CCWGG 5 cut(s) 254, 781, 854, 1224, 1341
AjuI GAANNNNNNNTTGG 2 cut(s) 2396, 2428
Alw21I GWGCWC 3 cut(s) 103, 2274, 2461
Alw26I GTCTC 7 cut(s) 102, 153, 803, 845, 2056, 2663, 2710
Alw44I GTGCAC 1 cut(s) 99
AlwI GGATC 6 cut(s) 60, 582, 595, 1333, 1338, 1376
AoxI GGCC 3 cut(s) 1762, 2384, 2478
ApaI GGGCCC 1 cut(s) 2388
ApaLI GTGCAC 1 cut(s) 99
ApeKI GCWGC 8 cut(s) 203, 872, 1738, 1885, 2107, 2258, 2265, 2494
ApoI RAATTY 3 cut(s) 1573, 2140, 2608
AseI ATTAAT 1 cut(s) 1802
Asp700I GAANNNNTTC 2 cut(s) 315, 1575
Asp718I GGTACC 1 cut(s) 1711
AspLEI GCGC 1 cut(s) 2377
AspS9I GGNCC 6 cut(s) 297, 1763, 1909, 2286, 2384, 2385
AsuC2I CCSGG 1 cut(s) 592
AsuHPI GGTGA 6 cut(s) 53, 550, 1357, 1644, 2135, 2425
AsuII TTCGAA 2 cut(s) 1669, 2150
AvaII GGWCC 3 cut(s) 297, 1909, 2286
BaeGI GKGCMC 2 cut(s) 103, 2388
BaeI ACNNNNGTAYC 2 cut(s) 1632, 1665
BamHI GGATCC 1 cut(s) 587
BanI GGYRCC 1 cut(s) 1711
BanII GRGCYC 1 cut(s) 2388
BauI CACGAG 1 cut(s) 26
BbsI GAAGAC 5 cut(s) 602, 897, 1678, 2579, 2802
Bbv12I GWGCWC 3 cut(s) 103, 2274, 2461
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 8 cut(s) 190, 859, 1750, 1872, 2119, 2252, 2270, 2481
BccI CCATC 5 cut(s) 574, 1063, 1084, 1688, 2702
BceAI ACGGC 2 cut(s) 1267, 2465
BciT130I CCWGG 5 cut(s) 256, 783, 856, 1226, 1343
BciVI GTATCC 1 cut(s) 900
BcnI CCSGG 1 cut(s) 592
BcoDI GTCTC 7 cut(s) 102, 153, 803, 845, 2056, 2663, 2710
BfmI CTRYAG 2 cut(s) 2105, 2770
BfoI RGCGCY 1 cut(s) 2378
BfuI GTATCC 1 cut(s) 900
BisI GCNGC 8 cut(s) 204, 873, 1739, 1886, 2108, 2259, 2266, 2495
BlsI GCNGC 8 cut(s) 205, 874, 1740, 1887, 2109, 2260, 2267, 2496
Bme1390I CCNGG 6 cut(s) 256, 592, 783, 856, 1226, 1343
Bme18I GGWCC 3 cut(s) 297, 1909, 2286
BmgT120I GGNCC 6 cut(s) 297, 1763, 1909, 2286, 2384, 2385
BmiI GGNNCC 9 cut(s) 298, 589, 1597, 1713, 1765, 2288, 2386, 2647, 2703
BmrFI CCNGG 6 cut(s) 256, 592, 783, 856, 1226, 1343
BmrI ACTGGG 2 cut(s) 2098, 2391
BmsI GCATC 7 cut(s) 130, 190, 559, 1256, 1515, 1627, 2245
BmuI ACTGGG 2 cut(s) 2098, 2391
BpiI GAAGAC 5 cut(s) 602, 897, 1678, 2579, 2802
BplI GAGNNNNNCTC 2 cut(s) 778, 810
BpmI CTGGAG 1 cut(s) 2261
Bpu10I CCTNAGC 2 cut(s) 6, 1742
Bpu14I TTCGAA 2 cut(s) 1669, 2150
BpuEI CTTGAG 6 cut(s) 1523, 1702, 1936, 2447, 2717, 2801
BpuMI CCSGG 1 cut(s) 592
BsaBI GATNNNNATC 1 cut(s) 2218
BsaI GGTCTC 2 cut(s) 102, 845
BsaJI CCNNGG 5 cut(s) 782, 855, 1635, 2078, 2843
Bsc4I CCNNNNNNNGG 2 cut(s) 523, 1967
Bse1I ACTGG 3 cut(s) 2093, 2386, 2451
Bse3DI GCAATG 3 cut(s) 931, 1029, 1620
Bse8I GATNNNNATC 1 cut(s) 2218
BseBI CCWGG 5 cut(s) 256, 783, 856, 1226, 1343
BseDI CCNNGG 5 cut(s) 782, 855, 1635, 2078, 2843
BseJI GATNNNNATC 1 cut(s) 2218
BseLI CCNNNNNNNGG 2 cut(s) 523, 1967
BseMI GCAATG 3 cut(s) 931, 1029, 1620
BseMII CTCAG 7 cut(s) 449, 978, 984, 1849, 1916, 2195, 2705
BseNI ACTGG 3 cut(s) 2093, 2386, 2451
BseRI GAGGAG 3 cut(s) 755, 2552, 2805
BseSI GKGCMC 2 cut(s) 103, 2388
BseXI GCAGC 8 cut(s) 190, 859, 1750, 1872, 2119, 2252, 2270, 2481
BsgI GTGCAG 1 cut(s) 2346
BshFI GGCC 3 cut(s) 1764, 2386, 2480
BshNI GGYRCC 1 cut(s) 1711
BsiHKAI GWGCWC 3 cut(s) 103, 2274, 2461
BsiSI CCGG 2 cut(s) 591, 1522
BslFI GGGAC 2 cut(s) 872, 2272
BslI CCNNNNNNNGG 2 cut(s) 523, 1967
BsmAI GTCTC 7 cut(s) 102, 153, 803, 845, 2056, 2663, 2710
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 2 cut(s) 872, 2272
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 3 cut(s) 1764, 2386, 2480
Bso31I GGTCTC 2 cut(s) 102, 845
Bsp119I TTCGAA 2 cut(s) 1669, 2150
Bsp120I GGGCCC 1 cut(s) 2384
Bsp1286I GDGCHC 4 cut(s) 103, 2274, 2388, 2461
Bsp19I CCATGG 2 cut(s) 1635, 2078
BspACI CCGC 8 cut(s) 585, 947, 1029, 1562, 2293, 2322, 2355, 2568
BspANI GGCC 3 cut(s) 1764, 2386, 2480
BspCNI CTCAG 7 cut(s) 450, 979, 985, 1848, 1917, 2196, 2706
BspHI TCATGA 1 cut(s) 1333
BspLI GGNNCC 9 cut(s) 298, 589, 1597, 1713, 1765, 2288, 2386, 2647, 2703
BspMAI CTGCAG 1 cut(s) 2109
BspPI GGATC 6 cut(s) 60, 582, 595, 1333, 1338, 1376
BspQI GCTCTTC 1 cut(s) 540
BspT104I TTCGAA 2 cut(s) 1669, 2150
BspT107I GGYRCC 1 cut(s) 1711
BspTNI GGTCTC 2 cut(s) 102, 845
BsrBI CCGCTC 1 cut(s) 1029
BsrDI GCAATG 3 cut(s) 931, 1029, 1620
BsrI ACTGG 3 cut(s) 2093, 2386, 2451
BssECI CCNNGG 5 cut(s) 782, 855, 1635, 2078, 2843
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 2 cut(s) 1635, 2078
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 5 cut(s) 256, 783, 856, 1226, 1343
Bst4CI ACNGT 4 cut(s) 164, 959, 2279, 2701
Bst6I CTCTTC 4 cut(s) 281, 540, 1343, 1560
BstAPI GCANNNNNTGC 1 cut(s) 385
BstBI TTCGAA 2 cut(s) 1669, 2150
BstC8I GCNNGC 4 cut(s) 99, 945, 2263, 2270
BstDSI CCRYGG 2 cut(s) 1635, 2078
BstEII GGTNACC 1 cut(s) 1639
BstENI CCTNNNNNAGG 1 cut(s) 1965
BstH2I RGCGCY 1 cut(s) 2378
BstHHI GCGC 1 cut(s) 2377
BstMAI GTCTC 7 cut(s) 102, 153, 803, 845, 2056, 2663, 2710
BstMWI GCNNNNNNNGC 3 cut(s) 385, 944, 2383
BstNI CCWGG 5 cut(s) 256, 783, 856, 1226, 1343
BstNSI RCATGY 3 cut(s) 947, 1241, 2026
BstPI GGTNACC 1 cut(s) 1639
BstSCI CCNGG 6 cut(s) 254, 590, 781, 854, 1224, 1341
BstSFI CTRYAG 2 cut(s) 2105, 2770
BstSLI GKGCMC 2 cut(s) 103, 2388
BstV1I GCAGC 8 cut(s) 190, 859, 1750, 1872, 2119, 2252, 2270, 2481
BstV2I GAAGAC 5 cut(s) 602, 897, 1678, 2579, 2802
BstX2I RGATCY 3 cut(s) 65, 587, 1338
BstXI CCANNNNNNTGG 1 cut(s) 1687
BstYI RGATCY 3 cut(s) 65, 587, 1338
BsuI GTATCC 1 cut(s) 900
BsuRI GGCC 3 cut(s) 1764, 2386, 2480
BtgI CCRYGG 2 cut(s) 1635, 2078
BtgZI GCGATG 1 cut(s) 536
BtsIMutI CAGTG 1 cut(s) 169
Cac8I GCNNGC 4 cut(s) 99, 945, 2263, 2270
CciI TCATGA 1 cut(s) 1333
CfoI GCGC 1 cut(s) 2377
Cfr13I GGNCC 6 cut(s) 297, 1763, 1909, 2286, 2384, 2385
CseI GACGC 1 cut(s) 155
Csp6I GTAC 4 cut(s) 1130, 1712, 2483, 2697
CviQI GTAC 4 cut(s) 1130, 1712, 2483, 2697
DraI TTTAAA 1 cut(s) 2139
EaeI YGGCCR 1 cut(s) 2478
Eam1104I CTCTTC 4 cut(s) 281, 540, 1343, 1560
EarI CTCTTC 4 cut(s) 281, 540, 1343, 1560
EciI GGCGGA 2 cut(s) 600, 1577
Eco130I CCWWGG 2 cut(s) 1635, 2078
Eco24I GRGCYC 1 cut(s) 2388
Eco31I GGTCTC 2 cut(s) 102, 845
Eco47I GGWCC 3 cut(s) 297, 1909, 2286
Eco57I CTGAAG 2 cut(s) 1074, 2573
Eco91I GGTNACC 1 cut(s) 1639
EcoNI CCTNNNNNAGG 1 cut(s) 1965
EcoO65I GGTNACC 1 cut(s) 1639
EcoRII CCWGG 5 cut(s) 254, 781, 854, 1224, 1341
EcoT14I CCWWGG 2 cut(s) 1635, 2078
EcoT22I ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
EcoT38I GRGCYC 1 cut(s) 2388
ErhI CCWWGG 2 cut(s) 1635, 2078
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 2 cut(s) 368, 400
FaqI GGGAC 2 cut(s) 872, 2272
FauNDI CATATG 1 cut(s) 1243
Fnu4HI GCNGC 8 cut(s) 204, 873, 1739, 1886, 2108, 2259, 2266, 2495
FriOI GRGCYC 1 cut(s) 2388
Fsp4HI GCNGC 8 cut(s) 204, 873, 1739, 1886, 2108, 2259, 2266, 2495
GlaI GCGC 1 cut(s) 2376
GluI GCNGC 8 cut(s) 204, 873, 1739, 1886, 2108, 2259, 2266, 2495
GsuI CTGGAG 1 cut(s) 2261
HaeII RGCGCY 1 cut(s) 2378
HaeIII GGCC 3 cut(s) 1764, 2386, 2480
HapII CCGG 2 cut(s) 591, 1522
HgaI GACGC 1 cut(s) 155
HhaI GCGC 1 cut(s) 2377
Hin6I GCGC 1 cut(s) 2375
HinP1I GCGC 1 cut(s) 2375
HindIII AAGCTT 3 cut(s) 231, 2575, 2777
HpaII CCGG 2 cut(s) 591, 1522
HphI GGTGA 6 cut(s) 53, 550, 1357, 1644, 2135, 2425
Hpy166II GTNNAC 5 cut(s) 101, 1060, 1201, 1912, 2102
Hpy188I TCNGA 7 cut(s) 77, 340, 370, 994, 1838, 1926, 2844
Hpy8I GTNNAC 5 cut(s) 101, 1060, 1201, 1912, 2102
Hpy99I CGWCG 1 cut(s) 159
HpyCH4III ACNGT 4 cut(s) 164, 959, 2279, 2701
HpyF10VI GCNNNNNNNGC 3 cut(s) 385, 944, 2383
HspAI GCGC 1 cut(s) 2375
KpnI GGTACC 1 cut(s) 1715
LguI GCTCTTC 1 cut(s) 540
LmnI GCTCC 1 cut(s) 2645
Lsp1109I GCAGC 8 cut(s) 190, 859, 1750, 1872, 2119, 2252, 2270, 2481
LweI GCATC 7 cut(s) 130, 190, 559, 1256, 1515, 1627, 2245
MaeIII GTNAC 5 cut(s) 41, 323, 634, 1639, 2439
MbiI CCGCTC 1 cut(s) 1029
MfeI CAATTG 2 cut(s) 434, 1441
MflI RGATCY 3 cut(s) 65, 587, 1338
MhlI GDGCHC 4 cut(s) 103, 2274, 2388, 2461
MlyI GAGTC 3 cut(s) 887, 998, 1936
MmeI TCCRAC 3 cut(s) 980, 2290, 2836
Mph1103I ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
MroXI GAANNNNTTC 2 cut(s) 315, 1575
MseI TTAA 6 cut(s) 1164, 1292, 1512, 1802, 2138, 2851
MslI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
MspA1I CMGCKG 1 cut(s) 2570
MspI CCGG 2 cut(s) 591, 1522
MspR9I CCNGG 6 cut(s) 256, 592, 783, 856, 1226, 1343
MunI CAATTG 2 cut(s) 434, 1441
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 5 cut(s) 256, 783, 856, 1226, 1343
MwoI GCNNNNNNNGC 3 cut(s) 385, 944, 2383
NciI CCSGG 1 cut(s) 592
NcoI CCATGG 2 cut(s) 1635, 2078
NdeI CATATG 1 cut(s) 1243
NlaIV GGNNCC 9 cut(s) 298, 589, 1597, 1713, 1765, 2288, 2386, 2647, 2703
NmuCI GTSAC 1 cut(s) 41
NsiI ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
NspI RCATGY 3 cut(s) 947, 1241, 2026
NspV TTCGAA 2 cut(s) 1669, 2150
PaeI GCATGC 1 cut(s) 947
PagI TCATGA 1 cut(s) 1333
PciI ACATGT 1 cut(s) 2022
PciSI GCTCTTC 1 cut(s) 540
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 315, 1575
PfeI GAWTC 7 cut(s) 251, 416, 509, 1474, 1666, 2746, 2839
PflMI CCANNNNNTGG 1 cut(s) 523
PfoI TCCNGGA 2 cut(s) 254, 590
PkrI GCNGC 8 cut(s) 205, 874, 1740, 1887, 2109, 2260, 2267, 2496
PleI GAGTC 3 cut(s) 887, 997, 1935
PpsI GAGTC 3 cut(s) 887, 997, 1935
PscI ACATGT 1 cut(s) 2022
PshBI ATTAAT 1 cut(s) 1802
PsiI TTATAA 2 cut(s) 1776, 2831
Psp6I CCWGG 5 cut(s) 254, 781, 854, 1224, 1341
PspEI GGTNACC 1 cut(s) 1639
PspGI CCWGG 5 cut(s) 254, 781, 854, 1224, 1341
PspN4I GGNNCC 9 cut(s) 298, 589, 1597, 1713, 1765, 2288, 2386, 2647, 2703
PspOMI GGGCCC 1 cut(s) 2384
PspPI GGNCC 6 cut(s) 297, 1763, 1909, 2286, 2384, 2385
PstI CTGCAG 1 cut(s) 2109
PsuI RGATCY 3 cut(s) 65, 587, 1338
RsaI GTAC 4 cut(s) 1131, 1713, 2484, 2698
RsaNI GTAC 4 cut(s) 1130, 1712, 2483, 2697
RseI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
SapI GCTCTTC 1 cut(s) 540
SaqAI TTAA 6 cut(s) 1164, 1292, 1512, 1802, 2138, 2851
SatI GCNGC 8 cut(s) 204, 873, 1739, 1886, 2108, 2259, 2266, 2495
Sau96I GGNCC 6 cut(s) 297, 1763, 1909, 2286, 2384, 2385
SchI GAGTC 3 cut(s) 887, 998, 1936
ScrFI CCNGG 6 cut(s) 256, 592, 783, 856, 1226, 1343
SduI GDGCHC 4 cut(s) 103, 2274, 2388, 2461
SfaNI GCATC 7 cut(s) 130, 190, 559, 1256, 1515, 1627, 2245
SfcI CTRYAG 2 cut(s) 2105, 2770
SfuI TTCGAA 2 cut(s) 1669, 2150
SinI GGWCC 3 cut(s) 297, 1909, 2286
SmiMI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
SmlI CTYRAG 6 cut(s) 1502, 1717, 1915, 2462, 2732, 2780
SmoI CTYRAG 6 cut(s) 1502, 1717, 1915, 2462, 2732, 2780
SphI GCATGC 1 cut(s) 947
SsiI CCGC 8 cut(s) 585, 947, 1029, 1562, 2293, 2322, 2355, 2568
StyD4I CCNGG 6 cut(s) 254, 590, 781, 854, 1224, 1341
StyI CCWWGG 2 cut(s) 1635, 2078
TaaI ACNGT 4 cut(s) 164, 959, 2279, 2701
TaqI TCGA 3 cut(s) 1669, 2150, 2231
TaqII GACCGA 1 cut(s) 2274
TatI WGTACW 1 cut(s) 1129
TfiI GAWTC 7 cut(s) 251, 416, 509, 1474, 1666, 2746, 2839
Tru1I TTAA 6 cut(s) 1164, 1292, 1512, 1802, 2138, 2851
Tru9I TTAA 6 cut(s) 1164, 1292, 1512, 1802, 2138, 2851
TscAI CASTG 1 cut(s) 169
TseFI GTSAC 1 cut(s) 41
TseI GCWGC 8 cut(s) 203, 872, 1738, 1885, 2107, 2258, 2265, 2494
Tsp45I GTSAC 1 cut(s) 41
TspDTI ATGAA 8 cut(s) 109, 534, 765, 822, 903, 942, 1874, 2066
TspGWI ACGGA 3 cut(s) 311, 1991, 2639
TspRI CASTG 1 cut(s) 169
Van91I CCANNNNNTGG 1 cut(s) 523
VneI GTGCAC 1 cut(s) 99
VpaK11BI GGWCC 3 cut(s) 297, 1909, 2286
VspI ATTAAT 1 cut(s) 1802
XagI CCTNNNNNAGG 1 cut(s) 1965
XapI RAATTY 3 cut(s) 1573, 2140, 2608
XceI RCATGY 3 cut(s) 947, 1241, 2026
XcmI CCANNNNNNNNNTGG 2 cut(s) 524, 2085
XmnI GAANNNNTTC 2 cut(s) 315, 1575
Zsp2I ATGCAT 4 cut(s) 1243, 1249, 1530, 1620
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.