pycom13g11110

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
7594070 .. 7598079
4010 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g11110.1

Sequence Viewer

Length: 2847 bp
ATGGCTGAGGCAGTGGTTTCCTTTGTGGTTGAAAGGCTTGGAGACTTAATCATTCAAGAAGCGAAGTTATTGCATGGAGTCAGCGATCAAGTTGAGGCTGCACGAAGAGAGCTACAAGTAGTGCGGGGTTTTCTGAAAGATGCAGATGTAAGGCAACGAGATGATGAAACGGTACATATTCTGGTCGCGGAAATTAGAAATGCTGCTTATGATTTGGAGGATGTCATAGAAATTTTTGTCCTCCAAGTGGCCTCGAAGAGGGAAGGAGGTATTATGAAGGTTCTGAAAAGGTTTGGTTGTGTGCTGAAGGAACGAGGTGATCTTCACAAAATTGGCTCAGCAATTAAGAAAATTACCACCCAGCTTTCCAATTGCAGGTCAAGCTTGCGAAATCATCACATCATGGAAGTAGCCACTTCTTTGTATGAGAGGCGGCAAAAACTAAGAAGAAGCTATTCTCATATTATTGATCGTGATGTTGTCGGTTTAGAAGCTGACGTACGAGAATTGGTTATGCAGTTGGTGAAGAAAGAGCCCAGACACCAAGTTGTTTCTATATGGGGCATGGGCGGTCTAGGAAAGACAACTCTTGCAAAACAGATTTATCATCATGATGAAGTTAGACGCCATTTTGGCAGCTTTGTGTGGGTATGTATCTCTCAACAATGTCAAGTAAGAGATGTTTGGGAACAACTTTTAATTAAACTTCTTTCTGCTACCACCGTGCAAAGAGAAGAAATTGCAAAAATGAAAGATGATGAAATAGCCAAGAGAATTTATCTTCTACAGCAAGAAAGTAGATGTTTGGTTGTCATCGATGATATTTGGAGCATGGAGACATGGGAGTCTTTGAAAGCTGCATTTCCACTAAATCAGAGAACAGAAAGCAGAATATTACTTACAACTCGAGTCAAGGAAGTAGCTTTGCATGCAGCAGATAGAAATGGTATCCTCCACGAACCTCGGCCGTTGAACGAAGATGAAAGTTGGGAACTATTGGAGAAGATAGCAATCTTCGGAAGAGAAGAAATAACCCCGGAAGTTTTCGGAAAGATGAAAGAAATAGGAAAGAAGATGCTTCAACATTGTGCCGGTTTGCCATTAGCTGTCATTGTGCTCGCAGGACTCCTTGCTACAAAGGATACAATTGAAGAGTGGGATACAGTGCTTAACAATGTTTATGCATACATAAGAAGAGGCAAAGGCCATGAACAAGAATGCATGGGTACATTGTGGGTGTTGTCATTGAGTTATGATAACTTACCCTATCACTTAAAATCATGCTTTTTGTATTTAGGCATTTTCCCAGAAGATTTTGAGATACCAGTGAAAAGATTGACTCAACTGTGGATGGCAGAAGGTTTTATATCTATGCCACTACAACAAACACAAGGTTTAGTAGAAACAATGGAGGAGATAGCATACAACTACTTAAATGAACTGGTGGACAGGTGTGTGGTTCAAATTGGGGAACGGGGTTCTGTTAGAAAGATCAAGTCTTGTCGTCTTCATGATCTTATGCGAGACTTGTGTTTGATAAAGTCAGAAGAGGAGGGCTTTCTCCAAAATGTCAAATCATTGCACAGAAGTGAGACTATGTATTCTCCTCCTTCTCTGATGATAGCCAAGGCAATACCAACGGGTAAGGTTCGAAGACTTGCCATCTGCTTGGATGAATATGTTGATAAATTAGTTCCATCAAGTTATGAAAGAGATGTCCGTCTCAGGTCTCTTTTATACTTTTGCCCATCAGATTGGTATCCAAGAAATAAAAGGCCAGTATCATCACTGTTTGAGGACTTCAAATTGCTCAGAGTTTTGAAGGTTGAAGGTATGGCTGCATTAGTAGACTTGCCAAATGAAATTGGGAATATGGTCCACTTGAGATTCTTAAGTCTAAGAAATAGTCGTATAAAACAGTTGCCATCTTGCCTGGGCAATTTGATACTTTTGCAAACTCTGGATCTTCGCATTCATTATGACTCGGATATGTTACCAAATGTATTTTGGAAGATGGTGCAACTGAGGCATTTGTATTTACCCTTGAATTACACCGCACATGGTAATAGACTACACCTATCTACTCTTCACAATTTGCAGACTTTAAATTATGTTTCGAGTGACTGTTGTGAGTTGAATGATCTTGCTGGGTTAACCGGTCTCAGAAAACTGGCCATAGAATTGGCAAGCCCCTTGAAAAATTTGGAGGAAACCTTGAAAGGTATAAGCAGCACACTCAATGGCATTCGATCTCTATTTGTGCACAACTTACTTGGAACTGGCACGGAGGTAACACAAATAGTATTGAGTTGTCGTCATGTGTACAAGCTGCAATTGATTGGTCGAACAGTAGAGTTACCTGGAGACCTTCAGCACTTTCCAAACCTCACTAAGTTATCTCTGTGCCGGTGTGATCTCAACCACAACCAAATGGCGGTACTAGCGAAGTTGCCAAATTTGAAAATCCTATGCCTAATGGAAGAAACTTTTGAGAGTTCAATTTCAGACACACTGGTTTTCTCCAACGAAGGCTTTCGTCATCTTGAATGTCTTTCCCTTGTTTCTATGTATGAGTTAAAGGACTTGAAGGTGGAAAGAGGAGCCATGCCGAGCCTCCGCCGATTTTTCATACAAGCTTGCTACAGATTGACCGAAATTCCAAACGGGCTGAGGTATCTTACTACGCTCAGGGAGTTAAGCTTCGCAAGGATGTCTACGACATTTCGTAACAGGCTTCAGGTAGGAGGAGAGGATTTCGATAAAGTCCAACACGTGCCTTCCGTTGTATTTGCCAACATGTTGGACAGTTCTGAGGTCACGAGACGCCAATCACGGCAGCGTATGTAG

Protein Analysis

949

Amino Acids

108.96

Weight (kDa)

8.3

Isoelectric Point (pI)

52.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 87 4e-22 Rx N-terminal domain
NB-ARC PF00931 164 - 338 3.7e-41 NB-ARC domain
WHD_DRP PF23559 434 - 511 9e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 597 - 901 9.5e-37 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 844
Acc36I ACCTGC 1 cut(s) 366
AccI GTMKAC 2 cut(s) 1848, 2714
AccII CGCG 1 cut(s) 188
AciI CCGC 7 cut(s) 124, 188, 433, 570, 2055, 2435, 2617
AclWI GGATC 1 cut(s) 1971
AcoI YGGCCR 2 cut(s) 965, 2172
AcsI RAATTY 5 cut(s) 231, 774, 2200, 2455, 2655
AcuI CTGAAG 3 cut(s) 326, 2354, 2720
AcvI CACGTG 1 cut(s) 2773
AcyI GRCGYC 2 cut(s) 625, 2824
AfaI GTAC 5 cut(s) 174, 501, 1228, 2324, 2439
AfiI CCNNNNNNNGG 4 cut(s) 247, 258, 375, 2434
AflII CTTAAG 1 cut(s) 1891
AflIII ACRYGT 2 cut(s) 2770, 2796
AgeI ACCGGT 1 cut(s) 2156
AjnI CCWGG 2 cut(s) 1932, 2359
AleI CACNNNNGTG 1 cut(s) 1587
Alw21I GWGCWC 2 cut(s) 1119, 2265
Alw26I GTCTC 9 cut(s) 36, 830, 1518, 1586, 1727, 1734, 2165, 2358, 2815
Alw44I GTGCAC 1 cut(s) 2261
AlwI GGATC 1 cut(s) 1971
Ama87I CYCGRG 1 cut(s) 906
AoxI GGCC 5 cut(s) 249, 965, 1204, 1775, 2172
ApaLI GTGCAC 1 cut(s) 2261
ApeKI GCWGC 9 cut(s) 98, 203, 636, 857, 932, 1838, 2229, 2329, 2836
ApoI RAATTY 5 cut(s) 231, 774, 2200, 2455, 2655
AsiGI ACCGGT 1 cut(s) 2156
Asp700I GAANNNNTTC 2 cut(s) 454, 2532
AspS9I GGNCC 1 cut(s) 1876
AsuC2I CCSGG 1 cut(s) 1037
AsuHPI GGTGA 2 cut(s) 329, 535
AsuII TTCGAA 1 cut(s) 1651
AvaI CYCGRG 1 cut(s) 906
AvaII GGWCC 1 cut(s) 1876
BaeGI GKGCMC 1 cut(s) 2265
BalI TGGCCA 1 cut(s) 2174
BanII GRGCYC 1 cut(s) 537
BarI GAAGNNNNNNTAC 2 cut(s) 483, 515
BauI CACGAG 1 cut(s) 2818
BbrPI CACGTG 1 cut(s) 2773
BbsI GAAGAC 2 cut(s) 1499, 1660
Bbv12I GWGCWC 2 cut(s) 1119, 2265
BbvCI CCTCAGC 2 cut(s) 6, 2669
BbvI GCAGC 8 cut(s) 85, 190, 648, 844, 944, 1825, 2241, 2316
BccI CCATC 6 cut(s) 1345, 1670, 1705, 1756, 1933, 2008
BceAI ACGGC 1 cut(s) 952
BcgI CGANNNNNNTGC 2 cut(s) 52, 86
BciT130I CCWGG 2 cut(s) 1934, 2361
BciVI GTATCC 4 cut(s) 959, 1135, 1153, 1770
BcnI CCSGG 1 cut(s) 1037
BcoDI GTCTC 9 cut(s) 36, 830, 1518, 1586, 1727, 1734, 2165, 2358, 2815
BfaI CTAG 2 cut(s) 575, 2441
BfmI CTRYAG 2 cut(s) 785, 2641
BfrI CTTAAG 1 cut(s) 1891
BfuAI ACCTGC 1 cut(s) 366
BfuI GTATCC 4 cut(s) 959, 1135, 1153, 1770
BglI GCCNNNNNGGC 1 cut(s) 633
BlpI GCTNAGC 1 cut(s) 337
Bme1390I CCNGG 3 cut(s) 1037, 1934, 2361
Bme18I GGWCC 1 cut(s) 1876
BmeT110I CYCGRG 1 cut(s) 906
BmgT120I GGNCC 1 cut(s) 1876
BmiI GGNNCC 1 cut(s) 2602
BmrFI CCNGG 3 cut(s) 1037, 1934, 2361
BmsI GCATC 2 cut(s) 130, 1065
BpiI GAAGAC 2 cut(s) 1499, 1660
BpmI CTGGAG 1 cut(s) 2382
Bpu10I CCTNAGC 3 cut(s) 6, 2669, 2687
Bpu1102I GCTNAGC 1 cut(s) 337
Bpu14I TTCGAA 1 cut(s) 1651
BpuEI CTTGAG 1 cut(s) 1903
BpuMI CCSGG 1 cut(s) 1037
Bsa29I ATCGAT 1 cut(s) 816
BsaAI YACGTR 1 cut(s) 2773
BsaBI GATNNNNATC 2 cut(s) 1010, 1758
BsaHI GRCGYC 2 cut(s) 625, 2824
BsaI GGTCTC 3 cut(s) 1734, 2165, 2358
BsaJI CCNNGG 4 cut(s) 962, 1035, 1626, 1933
BsaWI WCCGGW 1 cut(s) 2156
Bsc4I CCNNNNNNNGG 4 cut(s) 247, 258, 375, 2434
Bse118I RCCGGY 3 cut(s) 1091, 2156, 2406
Bse1I ACTGG 6 cut(s) 1325, 1446, 1778, 2175, 2284, 2517
Bse3DI GCAATG 1 cut(s) 1577
Bse8I GATNNNNATC 2 cut(s) 1010, 1758
BseBI CCWGG 2 cut(s) 1934, 2361
BseCI ATCGAT 1 cut(s) 816
BseDI CCNNGG 4 cut(s) 962, 1035, 1626, 1933
BseGI GGATG 4 cut(s) 226, 1356, 1678, 2715
BseJI GATNNNNATC 2 cut(s) 1010, 1758
BseLI CCNNNNNNNGG 4 cut(s) 247, 258, 375, 2434
BseMI GCAATG 1 cut(s) 1577
BseMII CTCAG 8 cut(s) 351, 1738, 1825, 2015, 2176, 2660, 2701, 2802
BseNI ACTGG 6 cut(s) 1325, 1446, 1778, 2175, 2284, 2517
BseRI GAGGAG 5 cut(s) 1427, 1565, 1596, 2613, 2760
BseSI GKGCMC 1 cut(s) 2265
BseX3I CGGCCG 1 cut(s) 965
BseXI GCAGC 8 cut(s) 85, 190, 648, 844, 944, 1825, 2241, 2316
BseYI CCCAGC 2 cut(s) 360, 2147
BsgI GTGCAG 1 cut(s) 84
Bsh1236I CGCG 1 cut(s) 188
Bsh1285I CGRYCG 1 cut(s) 968
BshFI GGCC 5 cut(s) 251, 967, 1206, 1777, 2174
BshTI ACCGGT 1 cut(s) 2156
BshVI ATCGAT 1 cut(s) 816
BsiEI CGRYCG 1 cut(s) 968
BsiHKAI GWGCWC 2 cut(s) 1119, 2265
BsiHKCI CYCGRG 1 cut(s) 906
BsiSI CCGG 4 cut(s) 1037, 1092, 2157, 2407
BsiWI CGTACG 1 cut(s) 499
BslI CCNNNNNNNGG 4 cut(s) 247, 258, 375, 2434
BsmAI GTCTC 9 cut(s) 36, 830, 1518, 1586, 1727, 1734, 2165, 2358, 2815
BsmBI CGTCTC 2 cut(s) 1727, 2815
BsmI GAATGC 3 cut(s) 1223, 1971, 2244
BsnI GGCC 5 cut(s) 251, 967, 1206, 1777, 2174
Bso31I GGTCTC 3 cut(s) 1734, 2165, 2358
BsoBI CYCGRG 1 cut(s) 906
Bsp119I TTCGAA 1 cut(s) 1651
Bsp1286I GDGCHC 3 cut(s) 537, 1119, 2265
Bsp1407I TGTACA 1 cut(s) 2322
Bsp143I GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
Bsp1720I GCTNAGC 1 cut(s) 337
BspACI CCGC 7 cut(s) 124, 188, 433, 570, 2055, 2435, 2617
BspANI GGCC 5 cut(s) 251, 967, 1206, 1777, 2174
BspCNI CTCAG 8 cut(s) 350, 1737, 1824, 2016, 2175, 2661, 2700, 2803
BspDI ATCGAT 1 cut(s) 816
BspFNI CGCG 1 cut(s) 188
BspHI TCATGA 2 cut(s) 610, 1510
BspLI GGNNCC 1 cut(s) 2602
BspMI ACCTGC 1 cut(s) 366
BspPI GGATC 1 cut(s) 1971
BspT104I TTCGAA 1 cut(s) 1651
BspTI CTTAAG 1 cut(s) 1891
BspTNI GGTCTC 3 cut(s) 1734, 2165, 2358
BsrDI GCAATG 1 cut(s) 1577
BsrFI RCCGGY 3 cut(s) 1091, 2156, 2406
BsrGI TGTACA 1 cut(s) 2322
BsrI ACTGG 6 cut(s) 1325, 1446, 1778, 2175, 2284, 2517
BssAI RCCGGY 3 cut(s) 1091, 2156, 2406
BssECI CCNNGG 4 cut(s) 962, 1035, 1626, 1933
BssMI GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
BssNI GRCGYC 2 cut(s) 625, 2824
BssSI CACGAG 1 cut(s) 2818
BssT1I CCWWGG 1 cut(s) 1626
Bst2BI CACGAG 1 cut(s) 2818
Bst2UI CCWGG 2 cut(s) 1934, 2361
Bst4CI ACNGT 9 cut(s) 172, 724, 1165, 1347, 1791, 1920, 2126, 2350, 2807
Bst6I CTCTTC 7 cut(s) 100, 251, 1015, 1146, 1189, 1542, 2091
BstACI GRCGYC 2 cut(s) 625, 2824
BstAFI CTTAAG 1 cut(s) 1891
BstAUI TGTACA 1 cut(s) 2322
BstBAI YACGTR 1 cut(s) 2773
BstBI TTCGAA 1 cut(s) 1651
BstC8I GCNNGC 5 cut(s) 386, 930, 1119, 2188, 2638
BstENI CCTNNNNNAGG 1 cut(s) 256
BstF5I GGATG 4 cut(s) 226, 1356, 1678, 2715
BstFNI CGCG 1 cut(s) 188
BstKTI GATC 9 cut(s) 88, 322, 472, 1494, 1516, 1966, 2143, 2252, 2416
BstMAI GTCTC 9 cut(s) 36, 830, 1518, 1586, 1727, 1734, 2165, 2358, 2815
BstMBI GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
BstMCI CGRYCG 1 cut(s) 968
BstMWI GCNNNNNNNGC 5 cut(s) 381, 633, 929, 2026, 2441
BstNI CCWGG 2 cut(s) 1934, 2361
BstNSI RCATGY 2 cut(s) 932, 2800
BstSCI CCNGG 3 cut(s) 1035, 1932, 2359
BstSFI CTRYAG 2 cut(s) 785, 2641
BstSLI GKGCMC 1 cut(s) 2265
BstUI CGCG 1 cut(s) 188
BstV1I GCAGC 8 cut(s) 85, 190, 648, 844, 944, 1825, 2241, 2316
BstV2I GAAGAC 2 cut(s) 1499, 1660
BstX2I RGATCY 1 cut(s) 1963
BstXI CCANNNNNNTGG 4 cut(s) 1669, 1755, 2182, 2800
BstYI RGATCY 1 cut(s) 1963
BstZI CGGCCG 1 cut(s) 965
Bsu15I ATCGAT 1 cut(s) 816
BsuI GTATCC 4 cut(s) 959, 1135, 1153, 1770
BsuRI GGCC 5 cut(s) 251, 967, 1206, 1777, 2174
BsuTUI ATCGAT 1 cut(s) 816
BtsCI GGATG 4 cut(s) 226, 1356, 1678, 2715
BtsI GCAGTG 1 cut(s) 18
BtsIMutI CAGTG 5 cut(s) 18, 1170, 1332, 1787, 2510
BveI ACCTGC 1 cut(s) 366
Cac8I GCNNGC 5 cut(s) 386, 930, 1119, 2188, 2638
CciI TCATGA 2 cut(s) 610, 1510
Cfr10I RCCGGY 3 cut(s) 1091, 2156, 2406
Cfr13I GGNCC 1 cut(s) 1876
ClaI ATCGAT 1 cut(s) 816
CseI GACGC 2 cut(s) 633, 2832
Csp6I GTAC 5 cut(s) 173, 500, 1227, 2323, 2438
CspAI ACCGGT 1 cut(s) 2156
CviQI GTAC 5 cut(s) 173, 500, 1227, 2323, 2438
DpnI GATC 9 cut(s) 87, 321, 471, 1493, 1515, 1965, 2142, 2251, 2415
DpnII GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
DraI TTTAAA 1 cut(s) 2106
DrdI GACNNNNNNGTC 1 cut(s) 844
DseDI GACNNNNNNGTC 1 cut(s) 844
EaeI YGGCCR 2 cut(s) 965, 2172
EagI CGGCCG 1 cut(s) 965
Eam1104I CTCTTC 7 cut(s) 100, 251, 1015, 1146, 1189, 1542, 2091
EarI CTCTTC 7 cut(s) 100, 251, 1015, 1146, 1189, 1542, 2091
EciI GGCGGA 1 cut(s) 2606
EclXI CGGCCG 1 cut(s) 965
Eco130I CCWWGG 1 cut(s) 1626
Eco24I GRGCYC 1 cut(s) 537
Eco31I GGTCTC 3 cut(s) 1734, 2165, 2358
Eco47I GGWCC 1 cut(s) 1876
Eco52I CGGCCG 1 cut(s) 965
Eco57I CTGAAG 3 cut(s) 326, 2354, 2720
Eco72I CACGTG 1 cut(s) 2773
Eco88I CYCGRG 1 cut(s) 906
EcoNI CCTNNNNNAGG 1 cut(s) 256
EcoRII CCWGG 2 cut(s) 1932, 2359
EcoT14I CCWWGG 1 cut(s) 1626
EcoT22I ATGCAT 2 cut(s) 1186, 1223
EcoT38I GRGCYC 1 cut(s) 537
ErhI CCWWGG 1 cut(s) 1626
Esp3I CGTCTC 2 cut(s) 1727, 2815
FauI CCCGC 1 cut(s) 117
FblI GTMKAC 2 cut(s) 1848, 2714
FokI GGATG 4 cut(s) 233, 1363, 1685, 2722
FriOI GRGCYC 1 cut(s) 537
FspBI CTAG 2 cut(s) 575, 2441
GsaI CCCAGC 2 cut(s) 364, 2151
GsuI CTGGAG 1 cut(s) 2382
HaeIII GGCC 5 cut(s) 251, 967, 1206, 1777, 2174
HapII CCGG 4 cut(s) 1037, 1092, 2157, 2407
HgaI GACGC 2 cut(s) 633, 2832
Hin1I GRCGYC 2 cut(s) 625, 2824
HincII GTYRAC 1 cut(s) 2154
HindII GTYRAC 1 cut(s) 2154
HindIII AAGCTT 3 cut(s) 382, 2634, 2698
HinfI GANTC 7 cut(s) 78, 845, 909, 1125, 1339, 1887, 1982
HpaI GTTAAC 1 cut(s) 2154
HpaII CCGG 4 cut(s) 1037, 1092, 2157, 2407
HphI GGTGA 2 cut(s) 329, 535
Hpy166II GTNNAC 7 cut(s) 1447, 1849, 1879, 2154, 2263, 2323, 2715
Hpy188III TCNNGA 7 cut(s) 56, 473, 611, 1511, 1961, 2543, 2818
Hpy8I GTNNAC 7 cut(s) 1447, 1849, 1879, 2154, 2263, 2323, 2715
HpyCH4III ACNGT 9 cut(s) 172, 724, 1165, 1347, 1791, 1920, 2126, 2350, 2807
HpyCH4IV ACGT 2 cut(s) 498, 2772
HpyF10VI GCNNNNNNNGC 5 cut(s) 381, 633, 929, 2026, 2441
HpySE526I ACGT 2 cut(s) 498, 2772
Hsp92I GRCGYC 2 cut(s) 625, 2824
KspAI GTTAAC 1 cut(s) 2154
Kzo9I GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
LmnI GCTCC 2 cut(s) 828, 2600
Lsp1109I GCAGC 8 cut(s) 85, 190, 648, 844, 944, 1825, 2241, 2316
LweI GCATC 2 cut(s) 130, 1065
MaeI CTAG 2 cut(s) 575, 2441
MaeII ACGT 2 cut(s) 498, 2772
MaeIII GTNAC 6 cut(s) 1992, 2120, 2290, 2355, 2726, 2815
MalI GATC 9 cut(s) 87, 321, 471, 1493, 1515, 1965, 2142, 2251, 2415
MboI GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
MfeI CAATTG 3 cut(s) 370, 1146, 2333
MflI RGATCY 1 cut(s) 1963
MhlI GDGCHC 3 cut(s) 537, 1119, 2265
MlsI TGGCCA 1 cut(s) 2174
MluNI TGGCCA 1 cut(s) 2174
MlyI GAGTC 6 cut(s) 87, 854, 918, 1119, 1333, 1976
MmeI TCCRAC 3 cut(s) 2547, 2781, 2791
Mox20I TGGCCA 1 cut(s) 2174
Mph1103I ATGCAT 2 cut(s) 1186, 1223
MroXI GAANNNNTTC 2 cut(s) 454, 2532
MscI TGGCCA 1 cut(s) 2174
MslI CAYNNNNRTG 2 cut(s) 612, 1587
Msp20I TGGCCA 1 cut(s) 2174
MspCI CTTAAG 1 cut(s) 1891
MspI CCGG 4 cut(s) 1037, 1092, 2157, 2407
MspR9I CCNGG 3 cut(s) 1037, 1934, 2361
MunI CAATTG 3 cut(s) 370, 1146, 2333
Mva1269I GAATGC 3 cut(s) 1223, 1971, 2244
MvaI CCWGG 2 cut(s) 1934, 2361
MvnI CGCG 1 cut(s) 188
MwoI GCNNNNNNNGC 5 cut(s) 381, 633, 929, 2026, 2441
NciI CCSGG 1 cut(s) 1037
NdeII GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
NlaIV GGNNCC 1 cut(s) 2602
NmeAIII GCCGAG 2 cut(s) 943, 2634
NmuCI GTSAC 2 cut(s) 2120, 2815
NsiI ATGCAT 2 cut(s) 1186, 1223
NspI RCATGY 2 cut(s) 932, 2800
NspV TTCGAA 1 cut(s) 1651
OliI CACNNNNGTG 1 cut(s) 1587
PacI TTAATTAA 1 cut(s) 702
PaeI GCATGC 1 cut(s) 932
PaeR7I CTCGAG 1 cut(s) 906
PagI TCATGA 2 cut(s) 610, 1510
PciI ACATGT 1 cut(s) 2796
PcsI WCGNNNNNNNCGW 1 cut(s) 2778
PctI GAATGC 3 cut(s) 1223, 1971, 2244
PdmI GAANNNNTTC 2 cut(s) 454, 2532
PfeI GAWTC 1 cut(s) 1887
Pfl23II CGTACG 1 cut(s) 499
PinAI ACCGGT 1 cut(s) 2156
PleI GAGTC 6 cut(s) 86, 853, 917, 1119, 1333, 1976
PmaCI CACGTG 1 cut(s) 2773
PmlI CACGTG 1 cut(s) 2773
PpsI GAGTC 6 cut(s) 86, 853, 917, 1119, 1333, 1976
Ppu21I YACGTR 1 cut(s) 2773
PscI ACATGT 1 cut(s) 2796
Psp6I CCWGG 2 cut(s) 1932, 2359
PspCI CACGTG 1 cut(s) 2773
PspFI CCCAGC 2 cut(s) 360, 2147
PspGI CCWGG 2 cut(s) 1932, 2359
PspLI CGTACG 1 cut(s) 499
PspN4I GGNNCC 1 cut(s) 2602
PspPI GGNCC 1 cut(s) 1876
PspXI VCTCGAGB 1 cut(s) 906
PsuI RGATCY 1 cut(s) 1963
RsaI GTAC 5 cut(s) 174, 501, 1228, 2324, 2439
RsaNI GTAC 5 cut(s) 173, 500, 1227, 2323, 2438
RseI CAYNNNNRTG 2 cut(s) 612, 1587
Sau3AI GATC 9 cut(s) 85, 319, 469, 1491, 1513, 1963, 2140, 2249, 2413
Sau96I GGNCC 1 cut(s) 1876
SchI GAGTC 6 cut(s) 87, 854, 918, 1119, 1333, 1976
ScrFI CCNGG 3 cut(s) 1037, 1934, 2361
SduI GDGCHC 3 cut(s) 537, 1119, 2265
SfaNI GCATC 2 cut(s) 130, 1065
SfcI CTRYAG 2 cut(s) 785, 2641
Sfr274I CTCGAG 1 cut(s) 906
SfuI TTCGAA 1 cut(s) 1651
SinI GGWCC 1 cut(s) 1876
SlaI CTCGAG 1 cut(s) 906
SmiMI CAYNNNNRTG 2 cut(s) 612, 1587
SmlI CTYRAG 3 cut(s) 906, 1882, 1891
SmoI CTYRAG 3 cut(s) 906, 1882, 1891
SphI GCATGC 1 cut(s) 932
SsiI CCGC 7 cut(s) 124, 188, 433, 570, 2055, 2435, 2617
SspI AATATT 1 cut(s) 894
SspMI CTAG 2 cut(s) 575, 2441
StyD4I CCNGG 3 cut(s) 1035, 1932, 2359
StyI CCWWGG 1 cut(s) 1626
TaaI ACNGT 9 cut(s) 172, 724, 1165, 1347, 1791, 1920, 2126, 2350, 2807
TaiI ACGT 2 cut(s) 501, 2775
TaqI TCGA 8 cut(s) 254, 816, 907, 1651, 2117, 2248, 2344, 2757
TaqII GACCGA 1 cut(s) 2666
TatI WGTACW 1 cut(s) 2322
TauI GCSGC 1 cut(s) 436
TfiI GAWTC 1 cut(s) 1887
TscAI CASTG 5 cut(s) 18, 1170, 1332, 1794, 2517
TseFI GTSAC 2 cut(s) 2120, 2815
TseI GCWGC 9 cut(s) 98, 203, 636, 857, 932, 1838, 2229, 2329, 2836
Tsp45I GTSAC 2 cut(s) 2120, 2815
TspGWI ACGGA 3 cut(s) 1709, 2300, 2770
TspRI CASTG 5 cut(s) 18, 1170, 1332, 1794, 2517
Vha464I CTTAAG 1 cut(s) 1891
VneI GTGCAC 1 cut(s) 2261
VpaK11BI GGWCC 1 cut(s) 1876
XagI CCTNNNNNAGG 1 cut(s) 256
XapI RAATTY 5 cut(s) 231, 774, 2200, 2455, 2655
XceI RCATGY 2 cut(s) 932, 2800
XcmI CCANNNNNNNNNTGG 1 cut(s) 2004
XhoI CTCGAG 1 cut(s) 906
XmiI GTMKAC 2 cut(s) 1848, 2714
XmnI GAANNNNTTC 2 cut(s) 454, 2532
XspI CTAG 2 cut(s) 575, 2441
Zsp2I ATGCAT 2 cut(s) 1186, 1223
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.