RchiOBHm_Chr1g0357611

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
49928571 .. 49940337
11767 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ58283

Sequence Viewer

Length: 2772 bp
ATGGCTGAAGCTGTCGTTTCAATGGTGATCCATGGGCTCAGGCCGCTCGGAAGCTTGATGATTCAGCAAGCAATGTTCTTCAAAGGAGTCGGCGATAAAGTTGAGATTGCACAAACCGAGCTACTCTTGATGCAAGGCTTCCTGAAAGATGCAGATGCACGACAAGAAAATGAAGAAGTGGTACGCTTATGGGTTAATATTATTAGAGAAGCTGCTTACGATTTGGAGGATGCCATTGAATCTTTTGTGTTGAAAGTAGCTTTGAAGAGGGAAGCAAGTGTGAAGGTAGTTCTCAAAAGGTTTGCTTGTTTCTTGTGCAAAGGATTGGATCGTTACAAGATCGGATTGGAAATCGAGAGCATTACTACCAAGCTTTCTAAGCTCAGATCGGATATGCAAAGCTATGACATAAAGCAAGAAAAGGGGAATGAAGGTGCTGCTACTTCAATGAGGCAGCGAGAACGCAGGCTAACCTATCCTCATGTTATTGATCATGATGTTGTTGGGTTAGGGGATGACACAGAGATGTTAGCTACAAATTTGGTGGAAGAAAAAGGCCCTCAAGTGGTAACTATTTGGGGCATGGGCGGCTCGGGAAAGACCACTCTTGCAAAACAAATTTACAATCATACGAAAGTCAAGTCTCATTTTGATTGTTTTGCTTGGGTGTGTATATCTCAACAATGTGACGGTACAGCAGTTATGAAAGAAATTTTCATTAAACTTAGCGGTGTGTCCGATGAGCGAAGACAAGGAATTGCAAGTCTGAGTAATGATGAAGTAGCAGAGAGGCTGTGCAATTTCCAACGACACAGAAAATGTTTGGTGGTCATCGATGATATTTGGACTTTTGATGCATGGAAATCTTTTAAAGGTGGATTTTCAGTGAATGAGGAAACTGAGAGCCGCATATTACTGACCACTCGCAACAGAGAAGTAGCTTCACTTGCAAGGGGAAATAGCTTACTCTACGAATCTCAGGCACTAAGTGCAGATGAAAGCTGGAATTTGTTTCGGAAGATAGCATTCTTTGAAATGGATGATACAAACTCTCAAATTTATTCAAAGAAAGAAGAACTGGGAAAGAATATGCTTCAACATTGTGCAGGTTTGCCATTAGCTATTATCGTGCTCGCAGGACTACTAGCTAGAAAAGACACAATTGATGAGTGGGAAACTGTGCATAAGAATGTTAATGTATATATAAGGAGAGGCACAGACCTTGAACGAGAATACCAAGGTAAAAAATATGAAGGTGCTTCATGGGTCTTGGCACTCAGTTATGACAACTTACCATATCGCTTAAAGCTATGCTTTTTGTACTTGGCAAATTTCCCTGAAGACTATGAGATACGGGTGAAAAGACTGACTCAGTTATGGATGACTGAAGGTTTGATATCCACGACATCAACAGAAATGATGGAAGATGTATCATATAGTTGCTTGAGTGAATTGGTGGAAAGGTGTATGGTTCAAGTTGTGGACATTGGTTTATCTGGGAAAATTAAAACTTGTCGTCTTCATGATCTTATGCGAGACTTAAGCTTGTTAAAAGCCGAAGAGGAGAACTTTTTACATGTTGTCAATTTTTATACAGGGACGAGAAACAACACAACACAAGTCGGTAGAGTTCGAAGAGTGGCAATGTATGTGAACAGCACAGTTGATCAATTAGTTCCCACTACAAGAGGTGCTCCCCTGAGGTCACTCTTATACTTCGGCCCACAACGCTATCTTCGAATCTGGAATATTAAAAAAGTCATCCGGTCTGTATTCAATGACTTCAAATTACTTAGAGTCTTGAAGTTGGAAGATATGGAAGGACTCAAAGAGTTACCGAGCACAATTGGGAATCTGGTCCACTTGCGGTTTTTAAGTCTAAAGAATACTGGAGTACAAAACTTGCCATCATCTGTAGCCAACTTGGTGTGTTTGCAGACTTTAGATTTACGTACTGATAGATTAAAGAAAATCCCGAATGTGTTTAAGAAGATGGAACAATTGAGGCATTTATATCTGCCCCGGTTTCACAAGGTGCGTGGGGAGCTCTCATTGGCTACAGCTTGCAACTTGCAGACGTTAGTCAATGTTGAATGTAGAAACTGTGATTTTAATGCCCTGGTTGAATTATACAATCTTCGGAAACTATCCATCCAGGATTGGGCAGGATCAGAACTCTGGAAAAAACTGGAGGGATTCTTGAGATGGAGAAGTAGTCCCACATTCCACCATCTTCGTTCTCTATCTCTGAAACTGTGGGGTCATGATTCATTAACGGGTTTATCGGGGTTTCATTTTATATACAAGCTGCGACTGGTGGGGTCCTCAATCAAGGAGTTACCAGAGAACCTCCTGTCCTTTCCAAACCTCATCAAGATAAAGCTGTATTCTACTCAACTGAAGGGGGACCAGGTAGAAATACTTGAGAAGCTGCCACACTTGAGAGTGCTTTACCTTCAACGTCGAGTTTTCTCCAGCCTTCCTTCAAACACACTGGTGTGCAGCAATCGAGGATTTCGCAATCTTGAATTTCTTTCCCTCCGAGGGTTGCCAGAAATGAAAGAGTGGAGGGTGGAGGAAGGAGCCATGCCTCGTCTCAGCAGATTGTGCATTGAAGACTGCGAGCAATTGAGGGCAGTTCCAGATGGGCTTCAATATGTTGCTACCCTCAAGGAGTTAACAGTCAAGGCGATGCCAAGTGAATTCTGTAGTAGGCTTGGGGAAGACGGGGAGGATTTCCACAAAATCAAACAGTGCCTTCTCTTATCATAA

Protein Analysis

923

Amino Acids

105.87

Weight (kDa)

8.74

Isoelectric Point (pI)

39.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 93 6.2e-20 Rx N-terminal domain
NB-ARC PF00931 174 - 344 3e-40 NB-ARC domain
WHD_DRP PF23559 445 - 514 6.1e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 591 - 897 1.8e-38 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1097
AccBSI CCGCTC 1 cut(s) 46
AciI CCGC 5 cut(s) 44, 588, 729, 907, 1867
AclWI GGATC 3 cut(s) 22, 336, 2176
AcsI RAATTY 8 cut(s) 538, 618, 711, 1006, 1056, 1330, 2528, 2702
AcuI CTGAAG 4 cut(s) 27, 1359, 1407, 2420
AdeI CACNNNGTG 2 cut(s) 989, 2035
AfaI GTAC 5 cut(s) 183, 694, 1322, 1896, 1954
AfiI CCNNNNNNNGG 3 cut(s) 565, 2161, 2544
AflII CTTAAG 1 cut(s) 1540
AflIII ACRYGT 1 cut(s) 1576
AjnI CCWGG 3 cut(s) 2118, 2154, 2409
AleI CACNNNNGTG 2 cut(s) 2495, 2497
AloI GAACNNNNNNTCC 2 cut(s) 2339, 2371
Alw21I GWGCWC 4 cut(s) 1134, 1696, 1844, 2049
Alw26I GTCTC 3 cut(s) 648, 1530, 2600
AlwI GGATC 3 cut(s) 22, 336, 2176
Ama87I CYCGRG 1 cut(s) 592
AoxI GGCC 3 cut(s) 41, 556, 1720
ApeKI GCWGC 6 cut(s) 212, 437, 454, 2308, 2431, 2502
ApoI RAATTY 8 cut(s) 538, 618, 711, 1006, 1056, 1330, 2528, 2702
ArsI GACNNNNNNTTYG 4 cut(s) 626, 658, 1375, 1407
AspS9I GGNCC 5 cut(s) 557, 1721, 1858, 2322, 2407
AsuC2I CCSGG 1 cut(s) 2023
AsuHPI GGTGA 2 cut(s) 37, 1369
AsuII TTCGAA 2 cut(s) 1633, 1738
AvaI CYCGRG 1 cut(s) 592
AvaII GGWCC 3 cut(s) 1858, 2322, 2407
AxyI CCTNAGG 1 cut(s) 1700
BaeI ACNNNNGTAYC 2 cut(s) 684, 717
BanII GRGCYC 2 cut(s) 39, 2049
BarI GAAGNNNNNNTAC 2 cut(s) 165, 197
BbsI GAAGAC 5 cut(s) 754, 1347, 1511, 2622, 2730
Bbv12I GWGCWC 4 cut(s) 1134, 1696, 1844, 2049
BbvI GCAGC 6 cut(s) 199, 424, 466, 2295, 2418, 2514
BccI CCATC 7 cut(s) 1414, 1915, 1987, 2159, 2199, 2238, 2639
BciT130I CCWGG 3 cut(s) 2120, 2156, 2411
BclI TGATCA 2 cut(s) 490, 1666
BcnI CCSGG 1 cut(s) 2023
BcoDI GTCTC 3 cut(s) 648, 1530, 2600
BfaI CTAG 2 cut(s) 1145, 1149
BfmI CTRYAG 3 cut(s) 1914, 2058, 2707
BfrI CTTAAG 1 cut(s) 1540
BfuAI ACCTGC 1 cut(s) 1097
BisI GCNGC 9 cut(s) 44, 213, 438, 455, 589, 907, 2309, 2432, 2503
BlsI GCNGC 9 cut(s) 45, 214, 439, 456, 590, 908, 2310, 2433, 2504
Bme1390I CCNGG 4 cut(s) 2023, 2120, 2156, 2411
Bme18I GGWCC 3 cut(s) 1858, 2322, 2407
BmeT110I CYCGRG 1 cut(s) 592
BmgT120I GGNCC 5 cut(s) 557, 1721, 1858, 2322, 2407
BmiI GGNNCC 3 cut(s) 2323, 2408, 2584
BmrFI CCNGG 4 cut(s) 2023, 2120, 2156, 2411
BmrI ACTGGG 1 cut(s) 1088
BmsI GCATC 6 cut(s) 120, 139, 145, 220, 844, 2682
BmuI ACTGGG 1 cut(s) 1088
BoxI GACNNNNGTC 1 cut(s) 2081
BpiI GAAGAC 5 cut(s) 754, 1347, 1511, 2622, 2730
BpmI CTGGAG 3 cut(s) 1911, 2210, 2458
Bpu10I CCTNAGC 1 cut(s) 38
Bpu14I TTCGAA 2 cut(s) 1633, 1738
BpuEI CTTGAG 6 cut(s) 546, 1465, 2221, 2444, 2461, 2654
BpuMI CCSGG 1 cut(s) 2023
Bsa29I ATCGAT 1 cut(s) 834
BsaAI YACGTR 1 cut(s) 1952
BsaJI CCNNGG 5 cut(s) 31, 1237, 2021, 2118, 2542
BsaWI WCCGGW 1 cut(s) 1764
BsaXI ACNNNNNCTCC 2 cut(s) 2200, 2230
Bsc4I CCNNNNNNNGG 3 cut(s) 565, 2161, 2544
Bse1I ACTGG 5 cut(s) 1083, 1894, 2193, 2319, 2499
Bse21I CCTNAGG 1 cut(s) 1700
Bse3DI GCAATG 2 cut(s) 78, 1650
BseBI CCWGG 3 cut(s) 2120, 2156, 2411
BseCI ATCGAT 1 cut(s) 834
BseDI CCNNGG 5 cut(s) 31, 1237, 2021, 2118, 2542
BseGI GGATG 6 cut(s) 235, 520, 1045, 1386, 1761, 2151
BseLI CCNNNNNNNGG 3 cut(s) 565, 2161, 2544
BseMI GCAATG 2 cut(s) 78, 1650
BseMII CTCAG 9 cut(s) 52, 397, 758, 891, 992, 1291, 1385, 1691, 2611
BseNI ACTGG 5 cut(s) 1083, 1894, 2193, 2319, 2499
BseRI GAGGAG 1 cut(s) 1577
BseXI GCAGC 6 cut(s) 199, 424, 466, 2295, 2418, 2514
BsgI GTGCAG 3 cut(s) 1011, 1125, 2521
BshFI GGCC 3 cut(s) 43, 558, 1722
BshVI ATCGAT 1 cut(s) 834
BsiHKAI GWGCWC 4 cut(s) 1134, 1696, 1844, 2049
BsiHKCI CYCGRG 1 cut(s) 592
BsiSI CCGG 2 cut(s) 1765, 2023
BslFI GGGAC 3 cut(s) 1612, 2202, 2420
BslI CCNNNNNNNGG 3 cut(s) 565, 2161, 2544
BsmAI GTCTC 3 cut(s) 648, 1530, 2600
BsmBI CGTCTC 1 cut(s) 2600
BsmFI GGGAC 3 cut(s) 1612, 2202, 2420
BsmI GAATGC 1 cut(s) 1025
BsnI GGCC 3 cut(s) 43, 558, 1722
BsoBI CYCGRG 1 cut(s) 592
Bsp119I TTCGAA 2 cut(s) 1633, 1738
Bsp1286I GDGCHC 5 cut(s) 39, 1134, 1696, 1844, 2049
Bsp143I GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
Bsp19I CCATGG 1 cut(s) 31
BspACI CCGC 5 cut(s) 44, 588, 729, 907, 1867
BspANI GGCC 3 cut(s) 43, 558, 1722
BspCNI CTCAG 9 cut(s) 51, 396, 759, 892, 991, 1290, 1384, 1692, 2610
BspDI ATCGAT 1 cut(s) 834
BspHI TCATGA 3 cut(s) 493, 1522, 2263
BspLI GGNNCC 3 cut(s) 2323, 2408, 2584
BspMI ACCTGC 1 cut(s) 1097
BspPI GGATC 3 cut(s) 22, 336, 2176
BspT104I TTCGAA 2 cut(s) 1633, 1738
BspTI CTTAAG 1 cut(s) 1540
BsrBI CCGCTC 1 cut(s) 46
BsrDI GCAATG 2 cut(s) 78, 1650
BsrI ACTGG 5 cut(s) 1083, 1894, 2193, 2319, 2499
BssECI CCNNGG 5 cut(s) 31, 1237, 2021, 2118, 2542
BssMI GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
BssT1I CCWWGG 2 cut(s) 31, 1237
Bst2UI CCWGG 3 cut(s) 2120, 2156, 2411
Bst4CI ACNGT 7 cut(s) 692, 1180, 1663, 2105, 2256, 2683, 2754
Bst6I CTCTTC 3 cut(s) 260, 1554, 1630
BstAFI CTTAAG 1 cut(s) 1540
BstAPI GCANNNNNTGC 2 cut(s) 989, 2607
BstBAI YACGTR 1 cut(s) 1952
BstBI TTCGAA 2 cut(s) 1633, 1738
BstC8I GCNNGC 5 cut(s) 69, 467, 1134, 2065, 2624
BstDSI CCRYGG 1 cut(s) 31
BstF5I GGATG 6 cut(s) 235, 520, 1045, 1386, 1761, 2151
BstKTI GATC 8 cut(s) 30, 331, 342, 389, 493, 1528, 1669, 2171
BstMAI GTCTC 3 cut(s) 648, 1530, 2600
BstMBI GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
BstMWI GCNNNNNNNGC 8 cut(s) 43, 379, 588, 947, 989, 1728, 2044, 2607
BstNI CCWGG 3 cut(s) 2120, 2156, 2411
BstNSI RCATGY 1 cut(s) 1580
BstPAI GACNNNNGTC 1 cut(s) 2081
BstSCI CCNGG 4 cut(s) 2021, 2118, 2154, 2409
BstSFI CTRYAG 3 cut(s) 1914, 2058, 2707
BstSNI TACGTA 1 cut(s) 1952
BstV1I GCAGC 6 cut(s) 199, 424, 466, 2295, 2418, 2514
BstV2I GAAGAC 5 cut(s) 754, 1347, 1511, 2622, 2730
Bsu15I ATCGAT 1 cut(s) 834
Bsu36I CCTNAGG 1 cut(s) 1700
BsuRI GGCC 3 cut(s) 43, 558, 1722
BsuTUI ATCGAT 1 cut(s) 834
BtgI CCRYGG 1 cut(s) 31
BtgZI GCGATG 1 cut(s) 2705
BtsCI GGATG 6 cut(s) 235, 520, 1045, 1386, 1761, 2151
BtsIMutI CAGTG 3 cut(s) 891, 2492, 2759
BveI ACCTGC 1 cut(s) 1097
Cac8I GCNNGC 5 cut(s) 69, 467, 1134, 2065, 2624
CciI TCATGA 3 cut(s) 493, 1522, 2263
Cfr13I GGNCC 5 cut(s) 557, 1721, 1858, 2322, 2407
ClaI ATCGAT 1 cut(s) 834
CsiI ACCWGGT 1 cut(s) 2409
Csp6I GTAC 5 cut(s) 182, 693, 1321, 1895, 1953
CspCI CAANNNNNGTGG 4 cut(s) 525, 560, 2020, 2055
CviQI GTAC 5 cut(s) 182, 693, 1321, 1895, 1953
DpnI GATC 8 cut(s) 29, 330, 341, 388, 492, 1527, 1668, 2170
DpnII GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
DraI TTTAAA 1 cut(s) 871
DraIII CACNNNGTG 2 cut(s) 989, 2035
Eam1104I CTCTTC 3 cut(s) 260, 1554, 1630
EarI CTCTTC 3 cut(s) 260, 1554, 1630
Ecl136II GAGCTC 1 cut(s) 2047
Eco105I TACGTA 1 cut(s) 1952
Eco130I CCWWGG 2 cut(s) 31, 1237
Eco24I GRGCYC 2 cut(s) 39, 2049
Eco32I GATATC 1 cut(s) 1398
Eco47I GGWCC 3 cut(s) 1858, 2322, 2407
Eco53kI GAGCTC 1 cut(s) 2047
Eco57I CTGAAG 4 cut(s) 27, 1359, 1407, 2420
Eco81I CCTNAGG 1 cut(s) 1700
Eco88I CYCGRG 1 cut(s) 592
EcoICRI GAGCTC 1 cut(s) 2047
EcoO109I RGGNCCY 2 cut(s) 557, 2322
EcoRI GAATTC 1 cut(s) 2702
EcoRII CCWGG 3 cut(s) 2118, 2154, 2409
EcoRV GATATC 1 cut(s) 1398
EcoT14I CCWWGG 2 cut(s) 31, 1237
EcoT22I ATGCAT 1 cut(s) 859
EcoT38I GRGCYC 2 cut(s) 39, 2049
ErhI CCWWGG 2 cut(s) 31, 1237
Esp3I CGTCTC 1 cut(s) 2600
FalI AAGNNNNNCTT 4 cut(s) 289, 321, 1298, 1330
FaqI GGGAC 3 cut(s) 1612, 2202, 2420
FbaI TGATCA 2 cut(s) 490, 1666
Fnu4HI GCNGC 9 cut(s) 44, 213, 438, 455, 589, 907, 2309, 2432, 2503
FokI GGATG 6 cut(s) 242, 527, 1052, 1393, 1748, 2138
FriOI GRGCYC 2 cut(s) 39, 2049
Fsp4HI GCNGC 9 cut(s) 44, 213, 438, 455, 589, 907, 2309, 2432, 2503
FspBI CTAG 2 cut(s) 1145, 1149
GluI GCNGC 9 cut(s) 44, 213, 438, 455, 589, 907, 2309, 2432, 2503
GsuI CTGGAG 3 cut(s) 1911, 2210, 2458
HaeIII GGCC 3 cut(s) 43, 558, 1722
HapII CCGG 2 cut(s) 1765, 2023
HincII GTYRAC 1 cut(s) 2679
HindII GTYRAC 1 cut(s) 2679
HindIII AAGCTT 3 cut(s) 52, 371, 1543
HpaI GTTAAC 1 cut(s) 2679
HpaII CCGG 2 cut(s) 1765, 2023
HphI GGTGA 2 cut(s) 37, 1369
Hpy166II GTNNAC 4 cut(s) 1483, 1654, 1861, 2679
Hpy8I GTNNAC 4 cut(s) 1483, 1654, 1861, 2679
Hpy99I CGWCG 1 cut(s) 2466
HpyCH4III ACNGT 7 cut(s) 692, 1180, 1663, 2105, 2256, 2683, 2754
HpyCH4IV ACGT 3 cut(s) 1951, 2078, 2461
HpyF10VI GCNNNNNNNGC 8 cut(s) 43, 379, 588, 947, 989, 1728, 2044, 2607
HpySE526I ACGT 3 cut(s) 1951, 2078, 2461
Ksp22I TGATCA 2 cut(s) 490, 1666
KspAI GTTAAC 1 cut(s) 2679
Kzo9I GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
LmnI GCTCC 3 cut(s) 1699, 2044, 2582
Lsp1109I GCAGC 6 cut(s) 199, 424, 466, 2295, 2418, 2514
LweI GCATC 6 cut(s) 120, 139, 145, 220, 844, 2682
MabI ACCWGGT 1 cut(s) 2409
MaeI CTAG 2 cut(s) 1145, 1149
MaeII ACGT 3 cut(s) 1951, 2078, 2461
MaeIII GTNAC 6 cut(s) 332, 568, 686, 1704, 1833, 2337
MalI GATC 8 cut(s) 29, 330, 341, 388, 492, 1527, 1668, 2170
MbiI CCGCTC 1 cut(s) 46
MboI GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
MfeI CAATTG 4 cut(s) 1161, 1845, 2000, 2627
MhlI GDGCHC 5 cut(s) 39, 1134, 1696, 1844, 2049
MlyI GAGTC 4 cut(s) 96, 1363, 1806, 1818
MmeI TCCRAC 2 cut(s) 829, 1788
Mph1103I ATGCAT 1 cut(s) 859
MslI CAYNNNNRTG 4 cut(s) 524, 1188, 2495, 2497
MspCI CTTAAG 1 cut(s) 1540
MspI CCGG 2 cut(s) 1765, 2023
MspR9I CCNGG 4 cut(s) 2023, 2120, 2156, 2411
MunI CAATTG 4 cut(s) 1161, 1845, 2000, 2627
Mva1269I GAATGC 1 cut(s) 1025
MvaI CCWGG 3 cut(s) 2120, 2156, 2411
MwoI GCNNNNNNNGC 8 cut(s) 43, 379, 588, 947, 989, 1728, 2044, 2607
NciI CCSGG 1 cut(s) 2023
NcoI CCATGG 1 cut(s) 31
NdeII GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
NlaIV GGNNCC 3 cut(s) 2323, 2408, 2584
NmuCI GTSAC 2 cut(s) 686, 1704
NsiI ATGCAT 1 cut(s) 859
NspI RCATGY 1 cut(s) 1580
NspV TTCGAA 2 cut(s) 1633, 1738
OliI CACNNNNGTG 2 cut(s) 2495, 2497
PagI TCATGA 3 cut(s) 493, 1522, 2263
PciI ACATGT 1 cut(s) 1576
PcsI WCGNNNNNNNCGW 1 cut(s) 1735
PctI GAATGC 1 cut(s) 1025
PfeI GAWTC 7 cut(s) 61, 239, 974, 1740, 1852, 2196, 2267
PfoI TCCNGGA 1 cut(s) 2154
PkrI GCNGC 9 cut(s) 45, 214, 439, 456, 590, 908, 2310, 2433, 2504
PleI GAGTC 4 cut(s) 95, 1363, 1805, 1818
PpsI GAGTC 4 cut(s) 95, 1363, 1805, 1818
Ppu21I YACGTR 1 cut(s) 1952
PpuMI RGGWCCY 1 cut(s) 2322
PscI ACATGT 1 cut(s) 1576
PshAI GACNNNNGTC 1 cut(s) 2081
Psp124BI GAGCTC 1 cut(s) 2049
Psp5II RGGWCCY 1 cut(s) 2322
Psp6I CCWGG 3 cut(s) 2118, 2154, 2409
PspGI CCWGG 3 cut(s) 2118, 2154, 2409
PspN4I GGNNCC 3 cut(s) 2323, 2408, 2584
PspPI GGNCC 5 cut(s) 557, 1721, 1858, 2322, 2407
PspPPI RGGWCCY 1 cut(s) 2322
RsaI GTAC 5 cut(s) 183, 694, 1322, 1896, 1954
RsaNI GTAC 5 cut(s) 182, 693, 1321, 1895, 1953
RseI CAYNNNNRTG 4 cut(s) 524, 1188, 2495, 2497
SacI GAGCTC 1 cut(s) 2049
SatI GCNGC 9 cut(s) 44, 213, 438, 455, 589, 907, 2309, 2432, 2503
Sau3AI GATC 8 cut(s) 27, 328, 339, 386, 490, 1525, 1666, 2168
Sau96I GGNCC 5 cut(s) 557, 1721, 1858, 2322, 2407
SchI GAGTC 4 cut(s) 96, 1363, 1806, 1818
ScrFI CCNGG 4 cut(s) 2023, 2120, 2156, 2411
SduI GDGCHC 5 cut(s) 39, 1134, 1696, 1844, 2049
SexAI ACCWGGT 1 cut(s) 2409
SfaNI GCATC 6 cut(s) 120, 139, 145, 220, 844, 2682
SfcI CTRYAG 3 cut(s) 1914, 2058, 2707
SfuI TTCGAA 2 cut(s) 1633, 1738
SinI GGWCC 3 cut(s) 1858, 2322, 2407
SmiMI CAYNNNNRTG 4 cut(s) 524, 1188, 2495, 2497
SmlI CTYRAG 7 cut(s) 561, 1444, 1540, 2200, 2423, 2440, 2669
SmoI CTYRAG 7 cut(s) 561, 1444, 1540, 2200, 2423, 2440, 2669
SnaBI TACGTA 1 cut(s) 1952
SsiI CCGC 5 cut(s) 44, 588, 729, 907, 1867
SspI AATATT 2 cut(s) 199, 1750
SspMI CTAG 2 cut(s) 1145, 1149
SstI GAGCTC 1 cut(s) 2049
StyD4I CCNGG 4 cut(s) 2021, 2118, 2154, 2409
StyI CCWWGG 2 cut(s) 31, 1237
TaaI ACNGT 7 cut(s) 692, 1180, 1663, 2105, 2256, 2683, 2754
TaiI ACGT 3 cut(s) 1954, 2081, 2464
TaqI TCGA 6 cut(s) 354, 834, 1633, 1738, 2464, 2509
TatI WGTACW 2 cut(s) 1320, 1894
TauI GCSGC 3 cut(s) 46, 591, 909
TfiI GAWTC 7 cut(s) 61, 239, 974, 1740, 1852, 2196, 2267
TscAI CASTG 3 cut(s) 891, 2499, 2759
TseFI GTSAC 2 cut(s) 686, 1704
TseI GCWGC 6 cut(s) 212, 437, 454, 2308, 2431, 2502
Tsp45I GTSAC 2 cut(s) 686, 1704
TspRI CASTG 3 cut(s) 891, 2499, 2759
Vha464I CTTAAG 1 cut(s) 1540
VpaK11BI GGWCC 3 cut(s) 1858, 2322, 2407
XapI RAATTY 8 cut(s) 538, 618, 711, 1006, 1056, 1330, 2528, 2702
XceI RCATGY 1 cut(s) 1580
XspI CTAG 2 cut(s) 1145, 1149
Zsp2I ATGCAT 1 cut(s) 859
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.