Rw1G024140

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
Physical Location & Seq
Forward (+)
50383507 .. 50386826
3320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G024140.1

Sequence Viewer

Length: 2898 bp
ATGGCTGGAGCTGTCGTTTCAATGGTGATCCTTGGGCTCAGGCCGCTCGGAAGCTTGATAATTCAGCAAGCTAAGTTCTTCAATGAAGTCGGCGATCAAGTTGAGCTTGCACAAAGCGAGCTACTCTTGATGCAAGGCTTCCTGAAAGATGCAGATGCACGACAAGAAGATGATGAAGTGGTACGCTTCTGGGTTAATGTGGTTAGAGAAGCTGCTTATGATTTGGAGGATGCCATTGAATCTTTTGTCTTGAAAGTAGCTTTGAAGAAGGAAGCAAGTGTGAAGGTAGTTCTCAAAAGGTTTGCTTGTTTCTTGAGCAAAGGAGTGGATCGTTACAAGATCGGTTTGGAAATTGAGAGAATTACGACCAAGCTTTCTAAGCTGAGGTTGACCATGCAAAGCTATGACATAAAGCAAGAGAAGGGGAATGAAGGTGCTACTTCTTCAATGAGGCAACGAGAACGCAGGCTAACCTATCCTCATGTTATTGAGCATGATGTTGTTGGGTTAGGGAACGACATAGAGATGTTAGCTACGCATTTGGTGGAAGAAAAAGGCCATCGAGTTGTTTCTATTTGGGGTATGGGCGGCTCGGGAAAGACCACTCTTGCAAAACAAATTTACAGTCATAAGAAAGTCAAGTCTCATTTTGATTGTTTTGCTTGGGTGTGTATATCTCAACAATGTGACGGTACAACAGTTATGAAAGAAATTTTCATGCAACTTAGTGGTGTGTCCGATGAGCAAAGAAAAGAAATTGCAAATCTGAGTAATCTTGAAATAGCAGAGAAGCTGTGGAATTTCCAACGACCCAGAAAATGTTTGGTGGTGCTCGATGATATTTGGACTCTTGATGCCTGGAACTCTTTTAATGGTGGATTTTCACTGAATGAGGAAACTGAGAGCCGCATATTATTGACCACTCGCAACAGAGAAGTAGCTTCATTTGCAAGGGGAAATAGCTTACTCTACGAATCTCAGGCACTAAGTGCAGATGAAAGCTGGAATTTGTTTCGGAAGATAGCATTCTTTGAAATGGATGATACAAACTCTCAAATTTATTCAAAGAAGGAAAAATTGGGAAAGAATATGCTTCAACATTGTACAGGATTGCCATTAGCTATTATCGTGCTCGCAGGACTACTAGCTAGAAAAGACACAATTGATGAGTGGGAAACTGTGCATAAGAATGTTAATGTATATATAAGAAGAGGCACAGACCTTGAACGAGAATACAAAGGTCAAAAATATGAAGGTGCTTCATGGGTCTTGGCACTCAGTTATGACAACTTACCATATCGCTTAAAGCTATGCTTTTTGTACTTGGCAAATTTTCCTGAAGACTATGAGATACGGGTGAAAAGACTGACTGAGTTATGGATGGCAGAAGGTTTTATATCCACGACGTCAACAGAAATGATGGAAGATGTATCATATAGTTGCTTGAGTGAATTGGTGGAAAGGTGTATGGTTCAAGTTGTGGACATTGGTTTATCTGGGAAAATTAGAACTTGTCGTCTTCATGATCTTATGCGAGACTTGAGCTTGTTAAAAGCCGAAGAGGAGAACTTTTTACATGTTGTCAATTTTTATACAGGGACGAGAACCAACACAACACAAGTCGGTAGAGTTCGAAGAGTGGCAATGTATTTGAACGAAATGGTTATTGATAAATTTGTTCCCACTACAAGAGGTGCTCCCCTGAGGTCACTCTTATACTTAGGCCCACGACAAATGGTTTATAGAATCTGTAATAAAAATTTCATCCGGTCTGTATTCAATGACTTCAAGTTGCTTAGAGTTCTGGAGTTAGAAGGTATGAGAGGACACCAAGAGTTACCGAGCACAATTGGAAATCTGGTCCACTTGCGGTTTTTAAGTCTAAAGAATACTGGAGTAGAAAACTGGCCATCATCTGTAGCTAACTTGGTGTGTTTGCAGACTTTAGATTTACGTACTGGTAGTAGACTTATGAAAATCCCAAATGTGTTTAAGAAGATGGAACAATTGAGGCATTTATATCTACCCTGGTCTTACATGGTACGTGGGGAGCTCTCATTTCCTACAGCTTGCAACTTGCAGACGTTAGTCAATGTTAAATGTGAATACTGTGATTTTAATGCCCTTGTTGAATTGTACAATCTTCGGAAACTATCCATCAAGGATTGGGCATCAAAACACTGGAAAAAACTGGAGGAATTATTGAAATCGAGAAGTAGTCCCCCATTCCACCATCTTCGTTCTCTATCTCTGCGACTGTATGGTCATGATTCATTAACGGATCTATCGGGGTTTCGTTTTATATACAAGCTGCGACTGGTGGGGTCCTCAATCAAGGAGTTACCAGAGAACCTGCTGTCCTTTCCAAACCTCATCAAGATAAAGCTGTATGATACCGAACTGAAGGGGGACCAGATAGAAGTACTTGAGAAGCTGCCACACTTGAGAGTGCTTCACCTCTATAATGCTTTCGCCAGCCTTCCTTCAAACACACTGGTTTGCAGCAATCGAGGATTTCCCAATCTTGAATTTCTTTCCCTTGAAGAGTTACCACAATTAAAAGAGTGGAGGGTGGAGGAAGGAGCCATGCCTCGTCTCCGCAGATTGTACATTGGTCAGTGCTCATTGAGGGCAGATGGGCTTCAATACGTTGCTACCCTCAAGGAGTTAACTGTCGAGCGGATGCCAAGTGAATTCTGTAGTAGGCTTGGCGAAGACGGGGAGGATTTCCACAAAATCAAACATATACCTTCTCTTATCATAACAGGAACTGAACAGAGAGACATGAACGACAAGGAGGAAGAGGAGTGGCGGAAGAAGTTGCTGGAGGAGAGAACGAGCAGGCTTGGACAAGATGCTGAGAGAGCGAGCAGGCGTATCTGGACATGTCTCAAGTAA

Protein Analysis

965

Amino Acids

111.44

Weight (kDa)

8.48

Isoelectric Point (pI)

38.43

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 14 - 93 5.3e-20 Rx N-terminal domain
NB-ARC PF00931 173 - 344 2.3e-40 NB-ARC domain
WHD_DRP PF23559 445 - 514 4.9e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 591 - 873 1.8e-35 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2262
AatII GACGTC 1 cut(s) 1409
Acc36I ACCTGC 1 cut(s) 2361
AccBSI CCGCTC 2 cut(s) 46, 2680
AccI GTMKAC 1 cut(s) 1966
AciI CCGC 7 cut(s) 44, 588, 907, 1870, 2599, 2680, 2812
AclWI GGATC 3 cut(s) 22, 336, 2289
AcoI YGGCCR 1 cut(s) 1907
AcuI CTGAAG 2 cut(s) 1359, 2423
AcyI GRCGYC 1 cut(s) 1406
AdeI CACNNNGTG 1 cut(s) 989
AfaI GTAC 9 cut(s) 183, 694, 1105, 1322, 1957, 2043, 2138, 2424, 2609
AflIII ACRYGT 2 cut(s) 1576, 2885
AjnI CCWGG 2 cut(s) 857, 2027
AjuI GAANNNNNNNTTGG 2 cut(s) 1061, 1093
AloI GAACNNNNNNTCC 2 cut(s) 2342, 2374
Alw21I GWGCWC 6 cut(s) 834, 1134, 1699, 1847, 2055, 2624
Alw26I GTCTC 5 cut(s) 648, 1530, 2600, 2775, 2894
AlwI GGATC 3 cut(s) 22, 336, 2289
AlwNI CAGNNNCTG 1 cut(s) 2771
Ama87I CYCGRG 1 cut(s) 592
AoxI GGCC 4 cut(s) 41, 556, 1723, 1907
ApeKI GCWGC 4 cut(s) 212, 2311, 2434, 2502
ArsI GACNNNNNNTTYG 2 cut(s) 610, 642
AspS9I GGNCC 4 cut(s) 1724, 1861, 2325, 2410
AsuHPI GGTGA 3 cut(s) 37, 1369, 2447
AsuII TTCGAA 1 cut(s) 1633
AvaI CYCGRG 1 cut(s) 592
AvaII GGWCC 3 cut(s) 1861, 2325, 2410
AxyI CCTNAGG 1 cut(s) 1703
BaeI ACNNNNGTAYC 2 cut(s) 684, 717
BalI TGGCCA 1 cut(s) 1909
BanII GRGCYC 2 cut(s) 39, 2055
BbsI GAAGAC 3 cut(s) 1347, 1511, 2721
Bbv12I GWGCWC 6 cut(s) 834, 1134, 1699, 1847, 2055, 2624
BbvCI CCTCAGC 1 cut(s) 383
BbvI GCAGC 4 cut(s) 199, 2298, 2421, 2514
BccI CCATC 8 cut(s) 567, 1375, 1414, 1918, 1993, 2165, 2241, 2630
BciT130I CCWGG 2 cut(s) 859, 2029
BcoDI GTCTC 5 cut(s) 648, 1530, 2600, 2775, 2894
BfaI CTAG 2 cut(s) 1145, 1149
BfmI CTRYAG 3 cut(s) 1917, 2064, 2698
BfuAI ACCTGC 1 cut(s) 2361
BisI GCNGC 7 cut(s) 44, 213, 589, 907, 2312, 2435, 2503
BlsI GCNGC 7 cut(s) 45, 214, 590, 908, 2313, 2436, 2504
BmcAI AGTACT 1 cut(s) 2424
Bme1390I CCNGG 2 cut(s) 859, 2029
Bme18I GGWCC 3 cut(s) 1861, 2325, 2410
BmeT110I CYCGRG 1 cut(s) 592
BmgT120I GGNCC 4 cut(s) 1724, 1861, 2325, 2410
BmiI GGNNCC 3 cut(s) 2326, 2411, 2584
BmrFI CCNGG 2 cut(s) 859, 2029
BmsI GCATC 8 cut(s) 120, 139, 145, 220, 844, 2180, 2673, 2845
BoxI GACNNNNGTC 1 cut(s) 2087
BpiI GAAGAC 3 cut(s) 1347, 1511, 2721
BpmI CTGGAG 5 cut(s) 27, 1826, 1914, 2213, 2846
Bpu10I CCTNAGC 2 cut(s) 38, 383
Bpu14I TTCGAA 1 cut(s) 1633
BpuEI CTTGAG 7 cut(s) 334, 1465, 1561, 2447, 2464, 2645, 2876
BsaAI YACGTR 2 cut(s) 1955, 2045
BsaHI GRCGYC 1 cut(s) 1406
BsaJI CCNNGG 2 cut(s) 31, 2027
BsaWI WCCGGW 1 cut(s) 1767
BsaXI ACNNNNNCTCC 1 cut(s) 30
Bse1I ACTGG 7 cut(s) 1897, 1910, 1963, 2186, 2196, 2322, 2499
Bse21I CCTNAGG 1 cut(s) 1703
Bse3DI GCAATG 1 cut(s) 1650
BseBI CCWGG 2 cut(s) 859, 2029
BseDI CCNNGG 2 cut(s) 31, 2027
BseGI GGATG 5 cut(s) 235, 1045, 1386, 1764, 2688
BseMI GCAATG 1 cut(s) 1650
BseMII CTCAG 9 cut(s) 52, 374, 758, 891, 992, 1291, 1362, 1694, 2850
BseNI ACTGG 7 cut(s) 1897, 1910, 1963, 2186, 2196, 2322, 2499
BseRI GAGGAG 3 cut(s) 1577, 2819, 2843
BseXI GCAGC 4 cut(s) 199, 2298, 2421, 2514
BsgI GTGCAG 1 cut(s) 1011
BshFI GGCC 4 cut(s) 43, 558, 1725, 1909
BsiHKAI GWGCWC 6 cut(s) 834, 1134, 1699, 1847, 2055, 2624
BsiHKCI CYCGRG 1 cut(s) 592
BsiSI CCGG 1 cut(s) 1768
BslFI GGGAC 3 cut(s) 1612, 2205, 2423
BsmAI GTCTC 5 cut(s) 648, 1530, 2600, 2775, 2894
BsmBI CGTCTC 1 cut(s) 2600
BsmFI GGGAC 3 cut(s) 1612, 2205, 2423
BsmI GAATGC 1 cut(s) 1025
BsnI GGCC 4 cut(s) 43, 558, 1725, 1909
BsoBI CYCGRG 1 cut(s) 592
Bsp119I TTCGAA 1 cut(s) 1633
Bsp1286I GDGCHC 7 cut(s) 39, 834, 1134, 1699, 1847, 2055, 2624
Bsp1407I TGTACA 3 cut(s) 1103, 2136, 2607
Bsp143I GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
BspACI CCGC 7 cut(s) 44, 588, 907, 1870, 2599, 2680, 2812
BspANI GGCC 4 cut(s) 43, 558, 1725, 1909
BspCNI CTCAG 9 cut(s) 51, 375, 759, 892, 991, 1290, 1363, 1695, 2851
BspHI TCATGA 2 cut(s) 1522, 2266
BspLI GGNNCC 3 cut(s) 2326, 2411, 2584
BspMI ACCTGC 1 cut(s) 2361
BspPI GGATC 3 cut(s) 22, 336, 2289
BspT104I TTCGAA 1 cut(s) 1633
BsrBI CCGCTC 2 cut(s) 46, 2680
BsrDI GCAATG 1 cut(s) 1650
BsrGI TGTACA 3 cut(s) 1103, 2136, 2607
BsrI ACTGG 7 cut(s) 1897, 1910, 1963, 2186, 2196, 2322, 2499
BssECI CCNNGG 2 cut(s) 31, 2027
BssMI GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
BssNI GRCGYC 1 cut(s) 1406
BssT1I CCWWGG 1 cut(s) 31
Bst2UI CCWGG 2 cut(s) 859, 2029
Bst4CI ACNGT 7 cut(s) 626, 692, 700, 1180, 2111, 2259, 2674
Bst6I CTCTTC 5 cut(s) 1204, 1554, 1630, 2538, 2796
BstACI GRCGYC 1 cut(s) 1406
BstAPI GCANNNNNTGC 1 cut(s) 989
BstAUI TGTACA 3 cut(s) 1103, 2136, 2607
BstBAI YACGTR 2 cut(s) 1955, 2045
BstBI TTCGAA 1 cut(s) 1633
BstF5I GGATG 5 cut(s) 235, 1045, 1386, 1764, 2688
BstKTI GATC 6 cut(s) 30, 97, 331, 342, 1528, 2284
BstMAI GTCTC 5 cut(s) 648, 1530, 2600, 2775, 2894
BstMBI GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
BstMWI GCNNNNNNNGC 5 cut(s) 43, 379, 947, 989, 2864
BstNI CCWGG 2 cut(s) 859, 2029
BstNSI RCATGY 2 cut(s) 1580, 2889
BstPAI GACNNNNGTC 1 cut(s) 2087
BstSCI CCNGG 2 cut(s) 857, 2027
BstSFI CTRYAG 3 cut(s) 1917, 2064, 2698
BstSNI TACGTA 1 cut(s) 1955
BstV1I GCAGC 4 cut(s) 199, 2298, 2421, 2514
BstV2I GAAGAC 3 cut(s) 1347, 1511, 2721
BstX2I RGATCY 1 cut(s) 2281
BstYI RGATCY 1 cut(s) 2281
Bsu36I CCTNAGG 1 cut(s) 1703
BsuRI GGCC 4 cut(s) 43, 558, 1725, 1909
BtsCI GGATG 5 cut(s) 235, 1045, 1386, 1764, 2688
BtsIMutI CAGTG 4 cut(s) 884, 2179, 2492, 2624
BveI ACCTGC 1 cut(s) 2361
CaiI CAGNNNCTG 1 cut(s) 2771
CciI TCATGA 2 cut(s) 1522, 2266
Cfr13I GGNCC 4 cut(s) 1724, 1861, 2325, 2410
Csp6I GTAC 9 cut(s) 182, 693, 1104, 1321, 1956, 2042, 2137, 2423, 2608
CviQI GTAC 9 cut(s) 182, 693, 1104, 1321, 1956, 2042, 2137, 2423, 2608
DpnI GATC 6 cut(s) 29, 96, 330, 341, 1527, 2283
DpnII GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
DraIII CACNNNGTG 1 cut(s) 989
DrdI GACNNNNNNGTC 1 cut(s) 2262
DseDI GACNNNNNNGTC 1 cut(s) 2262
EaeI YGGCCR 1 cut(s) 1907
Eam1104I CTCTTC 5 cut(s) 1204, 1554, 1630, 2538, 2796
EarI CTCTTC 5 cut(s) 1204, 1554, 1630, 2538, 2796
EciI GGCGGA 1 cut(s) 2827
Ecl136II GAGCTC 1 cut(s) 2053
Eco105I TACGTA 1 cut(s) 1955
Eco130I CCWWGG 1 cut(s) 31
Eco24I GRGCYC 2 cut(s) 39, 2055
Eco47I GGWCC 3 cut(s) 1861, 2325, 2410
Eco53kI GAGCTC 1 cut(s) 2053
Eco57I CTGAAG 2 cut(s) 1359, 2423
Eco81I CCTNAGG 1 cut(s) 1703
Eco88I CYCGRG 1 cut(s) 592
EcoICRI GAGCTC 1 cut(s) 2053
EcoO109I RGGNCCY 1 cut(s) 2325
EcoRI GAATTC 1 cut(s) 2693
EcoRII CCWGG 2 cut(s) 857, 2027
EcoT14I CCWWGG 1 cut(s) 31
EcoT38I GRGCYC 2 cut(s) 39, 2055
ErhI CCWWGG 1 cut(s) 31
Esp3I CGTCTC 1 cut(s) 2600
FalI AAGNNNNNCTT 6 cut(s) 90, 122, 289, 321, 1298, 1330
FaqI GGGAC 3 cut(s) 1612, 2205, 2423
FblI GTMKAC 1 cut(s) 1966
Fnu4HI GCNGC 7 cut(s) 44, 213, 589, 907, 2312, 2435, 2503
FokI GGATG 5 cut(s) 242, 1052, 1393, 1751, 2695
FriOI GRGCYC 2 cut(s) 39, 2055
Fsp4HI GCNGC 7 cut(s) 44, 213, 589, 907, 2312, 2435, 2503
FspBI CTAG 2 cut(s) 1145, 1149
GluI GCNGC 7 cut(s) 44, 213, 589, 907, 2312, 2435, 2503
GsuI CTGGAG 5 cut(s) 27, 1826, 1914, 2213, 2846
HaeIII GGCC 4 cut(s) 43, 558, 1725, 1909
HapII CCGG 1 cut(s) 1768
Hin1I GRCGYC 1 cut(s) 1406
HincII GTYRAC 3 cut(s) 390, 1410, 2670
HindII GTYRAC 3 cut(s) 390, 1410, 2670
HindIII AAGCTT 2 cut(s) 52, 371
HinfI GANTC 5 cut(s) 239, 847, 974, 1746, 2270
HpaI GTTAAC 1 cut(s) 2670
HpaII CCGG 1 cut(s) 1768
HphI GGTGA 3 cut(s) 37, 1369, 2447
Hpy166II GTNNAC 6 cut(s) 390, 1410, 1483, 1864, 1967, 2670
Hpy188I TCNGA 5 cut(s) 50, 739, 768, 1017, 2148
Hpy8I GTNNAC 6 cut(s) 390, 1410, 1483, 1864, 1967, 2670
Hpy99I CGWCG 1 cut(s) 1408
HpyCH4III ACNGT 7 cut(s) 626, 692, 700, 1180, 2111, 2259, 2674
HpyCH4IV ACGT 5 cut(s) 1406, 1954, 2044, 2084, 2649
HpyF10VI GCNNNNNNNGC 5 cut(s) 43, 379, 947, 989, 2864
HpySE526I ACGT 5 cut(s) 1406, 1954, 2044, 2084, 2649
Hsp92I GRCGYC 1 cut(s) 1406
KspAI GTTAAC 1 cut(s) 2670
Kzo9I GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
LmnI GCTCC 4 cut(s) 8, 1702, 2050, 2582
Lsp1109I GCAGC 4 cut(s) 199, 2298, 2421, 2514
LweI GCATC 8 cut(s) 120, 139, 145, 220, 844, 2180, 2673, 2845
MaeI CTAG 2 cut(s) 1145, 1149
MaeII ACGT 5 cut(s) 1406, 1954, 2044, 2084, 2649
MaeIII GTNAC 6 cut(s) 332, 686, 1707, 1836, 2340, 2547
MalI GATC 6 cut(s) 29, 96, 330, 341, 1527, 2283
MbiI CCGCTC 2 cut(s) 46, 2680
MboI GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
MfeI CAATTG 3 cut(s) 1161, 1848, 2006
MflI RGATCY 1 cut(s) 2281
MhlI GDGCHC 7 cut(s) 39, 834, 1134, 1699, 1847, 2055, 2624
MlsI TGGCCA 1 cut(s) 1909
MluNI TGGCCA 1 cut(s) 1909
MlyI GAGTC 1 cut(s) 841
MmeI TCCRAC 1 cut(s) 829
Mox20I TGGCCA 1 cut(s) 1909
MscI TGGCCA 1 cut(s) 1909
MslI CAYNNNNRTG 2 cut(s) 524, 1188
Msp20I TGGCCA 1 cut(s) 1909
MspI CCGG 1 cut(s) 1768
MspR9I CCNGG 2 cut(s) 859, 2029
MunI CAATTG 3 cut(s) 1161, 1848, 2006
Mva1269I GAATGC 1 cut(s) 1025
MvaI CCWGG 2 cut(s) 859, 2029
MwoI GCNNNNNNNGC 5 cut(s) 43, 379, 947, 989, 2864
NdeII GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
NlaIV GGNNCC 3 cut(s) 2326, 2411, 2584
NmuCI GTSAC 2 cut(s) 686, 1707
NspI RCATGY 2 cut(s) 1580, 2889
NspV TTCGAA 1 cut(s) 1633
PagI TCATGA 2 cut(s) 1522, 2266
PciI ACATGT 2 cut(s) 1576, 2885
PctI GAATGC 1 cut(s) 1025
PfeI GAWTC 4 cut(s) 239, 974, 1746, 2270
PkrI GCNGC 7 cut(s) 45, 214, 590, 908, 2313, 2436, 2504
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
Ppu21I YACGTR 2 cut(s) 1955, 2045
PpuMI RGGWCCY 1 cut(s) 2325
PscI ACATGT 2 cut(s) 1576, 2885
PshAI GACNNNNGTC 1 cut(s) 2087
Psp124BI GAGCTC 1 cut(s) 2055
Psp5II RGGWCCY 1 cut(s) 2325
Psp6I CCWGG 2 cut(s) 857, 2027
PspGI CCWGG 2 cut(s) 857, 2027
PspN4I GGNNCC 3 cut(s) 2326, 2411, 2584
PspPI GGNCC 4 cut(s) 1724, 1861, 2325, 2410
PspPPI RGGWCCY 1 cut(s) 2325
PstNI CAGNNNCTG 1 cut(s) 2771
PsuI RGATCY 1 cut(s) 2281
RsaI GTAC 9 cut(s) 183, 694, 1105, 1322, 1957, 2043, 2138, 2424, 2609
RsaNI GTAC 9 cut(s) 182, 693, 1104, 1321, 1956, 2042, 2137, 2423, 2608
RseI CAYNNNNRTG 2 cut(s) 524, 1188
SacI GAGCTC 1 cut(s) 2055
SatI GCNGC 7 cut(s) 44, 213, 589, 907, 2312, 2435, 2503
Sau3AI GATC 6 cut(s) 27, 94, 328, 339, 1525, 2281
Sau96I GGNCC 4 cut(s) 1724, 1861, 2325, 2410
ScaI AGTACT 1 cut(s) 2424
SchI GAGTC 1 cut(s) 841
ScrFI CCNGG 2 cut(s) 859, 2029
SduI GDGCHC 7 cut(s) 39, 834, 1134, 1699, 1847, 2055, 2624
SfaNI GCATC 8 cut(s) 120, 139, 145, 220, 844, 2180, 2673, 2845
SfcI CTRYAG 3 cut(s) 1917, 2064, 2698
SfuI TTCGAA 1 cut(s) 1633
SinI GGWCC 3 cut(s) 1861, 2325, 2410
SmiMI CAYNNNNRTG 2 cut(s) 524, 1188
SmlI CTYRAG 7 cut(s) 313, 1444, 1540, 2426, 2443, 2660, 2891
SmoI CTYRAG 7 cut(s) 313, 1444, 1540, 2426, 2443, 2660, 2891
SnaBI TACGTA 1 cut(s) 1955
SsiI CCGC 7 cut(s) 44, 588, 907, 1870, 2599, 2680, 2812
SspMI CTAG 2 cut(s) 1145, 1149
SstI GAGCTC 1 cut(s) 2055
StyD4I CCNGG 2 cut(s) 857, 2027
StyI CCWWGG 1 cut(s) 31
TaaI ACNGT 7 cut(s) 626, 692, 700, 1180, 2111, 2259, 2674
TaiI ACGT 5 cut(s) 1409, 1957, 2047, 2087, 2652
TaqI TCGA 6 cut(s) 562, 834, 1633, 2210, 2509, 2676
TatI WGTACW 5 cut(s) 1103, 1320, 2136, 2422, 2607
TauI GCSGC 3 cut(s) 46, 591, 909
TfiI GAWTC 4 cut(s) 239, 974, 1746, 2270
TscAI CASTG 4 cut(s) 891, 2186, 2499, 2624
TseFI GTSAC 2 cut(s) 686, 1707
TseI GCWGC 4 cut(s) 212, 2311, 2434, 2502
Tsp45I GTSAC 2 cut(s) 686, 1707
TspGWI ACGGA 1 cut(s) 2294
TspRI CASTG 4 cut(s) 891, 2186, 2499, 2624
VpaK11BI GGWCC 3 cut(s) 1861, 2325, 2410
XceI RCATGY 2 cut(s) 1580, 2889
XcmI CCANNNNNNNNNTGG 1 cut(s) 820
XmiI GTMKAC 1 cut(s) 1966
XspI CTAG 2 cut(s) 1145, 1149
ZraI GACGTC 1 cut(s) 1407
ZrmI AGTACT 1 cut(s) 2424
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.