Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000251.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

122845 .. 126205

Gene Structure 3361 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000251.1_g000028.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2988 bp

atggctgaaggcgttgttacagttgtggctgaagggatcaagccccttggagagttcatcattcagcaagcgaaattcttgagtggagtcagcaatcaaattgagcttgcgcagaacgagctacacttgatccgaggatttctaaaagacgcagatgcgaatcaacaagatgaaaaactagtacgcaattgtgttgaacttatcagagatgctgcttatgacttggaggatgtcattgaatctttttacttgaaagtggcttccaggaggagaggaggtactgtgaagattgttctcaaaaggtttgcctgcatctttaatgaaggactgaatcgatacaagattgggtctgaaattaaagatattatgaccaaactttctcatcagaggttgagtttgcaaagttacaacataagacaagtaagtgggggtgaaagtgtggcttctgcttttaagaggcaacgagataggaggctaacttatgctcatcaagttgaaagtcatattattgggttggaggaaattacggaaacactagtgaaaaagttggtgagagaaggaaagcgtcacctagttatttctatttgggggatgggcggctctggaaaaaccactcttgcaaaacaggtttttcgtcaaaatgaaattaagcgtcattttgattgttttgcttgggtctgtatatctcaacaatgggaaggaaagaatgtattggaagatattttagttaaactcacttccccaacagcaaagaaaaggaaagaaatttccaacatgaaaatggatgaaatagcagaagaggtctgtaggatccaacgagaaaagagatgtctggtggtccttgatgacatatggactcaagaggcttggaattcgataaaagctggattcccaatcaatgaagaaacagagagccggatattactcactactcgcaagaaagaagtcgccttgcttgcatccagaaatggctttctccaccagcctcaacctctaaatgatatgcaaagctgggaactgtttgaaaagatagccatatgtggaagcgacaaaacagacttggaaattgatgcagagaagagaaaattaggagaggagatgcttaaacattgttcaggtctaccattaggcatcagcgtgctcgctggtcttcttagtagacgagagccggttgatgaatggaagacagtacttggaaatattaatgtatacataatgagaggcacaaatgtccttgaaagagaaaagacaagtcaggagggtggtgtttcaggtgtcttggcattgagttatgatgacttaccatctcacttgaaactctgctttctgtatttagcccaatatcctgaggagcatgagatacaggtaacaagattgactcaattatggattgcagaagggtttataccttcaacatcagaaataaatggttcaattgaattaatggaagatgtatcatatggttgcctaactgaactggtggaaagatctatggttcaagttggacaatatggttttagtgggaaggtgaaacgttcccgtctccatgatcttatgcgggacttgtgcttgcaaaaggcaaaagaggagaactttctcggtattgttaactcttctttgggtctgggatctaatgcaacgctgatcagtaaggttcgaagacttgccctctatttggacgaaaatgttgaatatgagttcagcagtaaggatggaagagatggccacatcagatctctattatacttcgccccaaaattcttcaagcaaaagtggaacaaaagaataatacgatcagtattcaatgacttcaaattgcttagagtcttgaagtttgaaaatatatatacagagtttgagttaccaaagacgattgggaatctagtccacctgaggtttctgagtctgaagaatagtgcatttcgtgccttgccatcatctgtatctaatctggtactcttgcaaactctagatctgcggggtgtacgtataggtaccaaaatcagaaatgtgttttggaatttggagcagctgaggcatttgtatttaccttctaagcccagtttcagtgagaaaatgtcatttgcaaggctgtgcaatttgcagacgttggtcaatgtttcaattgagaaatgtgatttgaatgatcttgttcggttaatcgatctgaaaaaactacgcataatgccatcacaatctagtgagttggaaaagttgaaggacatgttgatatcaaggaatagaacatatgagcatcttcggtctctatctctgcaggcaggccgatatggtgagggggatataccaagtgatatagtattaaggtgtcctcatttatacaagctgcggctggaggggaaaatgacagcgttaccgaaagagctcccaaacctcgccaagataacgctgatagcaacaagactgaagggtgaccagattgaaatactggagaagctgcccaacttaagggtgctttacctcgactggcgttctttcgaatcagaaacaatggttttctcccaaggaggctttcctcatctgaaatttcttacccttagatggttggatgatttgaaggagtggagggtggagaaagaagccatgcctagtcttcagagattgcgcattgaatattgccgagaattgcgggcagttccagatgggcttcaggagattactaccctcaaggaattaacaattgaccggatgcccagtagattctgcagtagggttggggaaggaggagaggatttctacaaaatcaaagatgtgccttctcttatattcacaaatatctggggcttaaagaaagccaaggagcgagaaatggaggaagcagcaggtgcgtctcaagtagttgcgggtccagctggtgactctcatgaggaatcaactgtgactataatcgactcaatcccgttttatcattcccgttttatcattcccgttttattattgtgtgatcaaattaaagattttatttactga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

995

Amino Acids

114.09

Weight (kDa)

8.74

Isoelectric Point (pI)

49.88

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	2831
Acc16I	TGCGCA	2 cut(s)	111, 2624
Acc36I	ACCTGC	1 cut(s)	2831
Acc65I	GGTACC	1 cut(s)	1994
AccB1I	GGYRCC	1 cut(s)	1994
AccI	GTMKAC	3 cut(s)	1120, 1159, 1209
AciI	CCGC	6 cut(s)	597, 1558, 1978, 2347, 2647, 2861
AclI	AACGTT	1 cut(s)	1534
AclWI	GGATC	5 cut(s)	44, 124, 805, 818, 1636
AcoI	YGGCCR	1 cut(s)	1723
AcsI	RAATTY	6 cut(s)	74, 765, 871, 1757, 2020, 2543
AcuI	CTGAAG	6 cut(s)	27, 51, 1928, 2444, 2597, 2651
AfaI	GTAC	6 cut(s)	183, 280, 1191, 1956, 1986, 1996
AfiI	CCNNNNNNNGG	3 cut(s)	1675, 2466, 2559
AflII	CTTAAG	1 cut(s)	2464
AflIII	ACRYGT	1 cut(s)	2223
AhlI	ACTAGT	2 cut(s)	178, 535
AjnI	CCWGG	1 cut(s)	263
AjuI	GAANNNNNNNTTGG	4 cut(s)	1999, 2031, 2514, 2546
AluBI	AGCT	9 cut(s)	106, 121, 884, 1011, 2032, 2344, 2383, 2455, 2870
AluI	AGCT	9 cut(s)	106, 121, 884, 1011, 2032, 2344, 2383, 2455, 2870
Alw21I	GWGCWC	2 cut(s)	1143, 2385
Alw26I	GTCTC	3 cut(s)	1547, 2268, 2853
AlwI	GGATC	5 cut(s)	44, 124, 805, 818, 1636
AoxI	GGCC	2 cut(s)	1723, 2281
ApeKI	GCWGC	5 cut(s)	212, 2029, 2344, 2455, 2837
ApoI	RAATTY	6 cut(s)	74, 765, 871, 1757, 2020, 2543
AseI	ATTAAT	2 cut(s)	1203, 1442
Asp718I	GGTACC	1 cut(s)	1994
AspLEI	GCGC	2 cut(s)	112, 2625
AspS9I	GGNCC	2 cut(s)	838, 2864
AsuHPI	GGTGA	7 cut(s)	443, 560, 562, 1540, 2303, 2441, 2885
AsuII	TTCGAA	2 cut(s)	1657, 2496
AvaII	GGWCC	2 cut(s)	838, 2864
AxyI	CCTNAGG	2 cut(s)	1347, 1892
BalI	TGGCCA	1 cut(s)	1725
BamHI	GGATCC	1 cut(s)	810
BanI	GGYRCC	1 cut(s)	1994
BanII	GRGCYC	1 cut(s)	2385
BarI	GAAGNNNNNNTAC	2 cut(s)	1389, 1421
BbsI	GAAGAC	4 cut(s)	1142, 1190, 1666, 2603
Bbv12I	GWGCWC	2 cut(s)	1143, 2385
BbvCI	CCTCAGC	1 cut(s)	2033
BbvI	GCAGC	5 cut(s)	199, 2041, 2331, 2442, 2849
BccI	CCATC	8 cut(s)	586, 1312, 1706, 1715, 1942, 2197, 2553, 2654
BciT130I	CCWGG	1 cut(s)	265
BclI	TGATCA	2 cut(s)	1644, 2962
BcoDI	GTCTC	3 cut(s)	1547, 2268, 2853
BcuI	ACTAGT	2 cut(s)	178, 535
BfaI	CTAG	7 cut(s)	179, 536, 572, 1883, 1970, 2199, 2607
BfmI	CTRYAG	3 cut(s)	805, 2273, 2722
BfrI	CTTAAG	1 cut(s)	2464
BfuAI	ACCTGC	1 cut(s)	2831
BglII	AGATCT	3 cut(s)	1487, 1733, 1972
BisI	GCNGC	7 cut(s)	213, 598, 2030, 2345, 2348, 2456, 2838
BlsI	GCNGC	7 cut(s)	214, 599, 2031, 2346, 2349, 2457, 2839
BmcAI	AGTACT	1 cut(s)	1191
Bme1390I	CCNGG	1 cut(s)	265
Bme18I	GGWCC	2 cut(s)	838, 2864
BmgT120I	GGNCC	2 cut(s)	838, 2864
BmiI	GGNNCC	3 cut(s)	812, 1996, 2865
BmrFI	CCNGG	1 cut(s)	265
BmrI	ACTGGG	2 cut(s)	2055, 2706
BmsI	GCATC	9 cut(s)	145, 199, 321, 968, 1060, 1089, 1140, 2263, 2697
BmuI	ACTGGG	2 cut(s)	2055, 2706
BoxI	GACNNNNGTC	1 cut(s)	2111
BpiI	GAAGAC	4 cut(s)	1142, 1190, 1666, 2603
BpmI	CTGGAG	2 cut(s)	2372, 2468
Bpu10I	CCTNAGC	1 cut(s)	2033
Bpu14I	TTCGAA	2 cut(s)	1657, 2496
BpuEI	CTTGAG	4 cut(s)	100, 843, 2669, 2835
Bsa29I	ATCGAT	2 cut(s)	334, 2163
BsaAI	YACGTR	1 cut(s)	1988
BsaBI	GATNNNNATC	1 cut(s)	159
BsaI	GGTCTC	1 cut(s)	2268
BsaJI	CCNNGG	4 cut(s)	46, 133, 2521, 2814
BsaWI	WCCGGW	1 cut(s)	2703
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 267, 292, 297
Bsc4I	CCNNNNNNNGG	3 cut(s)	1675, 2466, 2559
Bse118I	RCCGGY	1 cut(s)	1168
Bse1I	ACTGG	5 cut(s)	1482, 2061, 2451, 2489, 2712
Bse21I	CCTNAGG	2 cut(s)	1347, 1892
Bse8I	GATNNNNATC	1 cut(s)	159
BseBI	CCWGG	1 cut(s)	265
BseCI	ATCGAT	2 cut(s)	334, 2163
BseDI	CCNNGG	4 cut(s)	46, 133, 2521, 2814
BseGI	GGATG	7 cut(s)	235, 597, 790, 959, 1717, 2572, 2712
BseJI	GATNNNNATC	1 cut(s)	159
BseLI	CCNNNNNNNGG	3 cut(s)	1675, 2466, 2559
BseMII	CTCAG	4 cut(s)	1338, 1883, 1892, 2024
BseNI	ACTGG	5 cut(s)	1482, 2061, 2451, 2489, 2712
BseRI	GAGGAG	6 cut(s)	283, 288, 1109, 1364, 1601, 2757
BseXI	GCAGC	5 cut(s)	199, 2041, 2331, 2442, 2849
BseYI	CCCAGC	1 cut(s)	1011
BshFI	GGCC	2 cut(s)	1725, 2283
BshNI	GGYRCC	1 cut(s)	1994
BshVI	ATCGAT	2 cut(s)	334, 2163
BsiHKAI	GWGCWC	2 cut(s)	1143, 2385
BsiSI	CCGG	3 cut(s)	916, 1169, 2704
BslFI	GGGAC	1 cut(s)	1574
BslI	CCNNNNNNNGG	3 cut(s)	1675, 2466, 2559
BsmAI	GTCTC	3 cut(s)	1547, 2268, 2853
BsmBI	CGTCTC	2 cut(s)	1547, 2853
BsmFI	GGGAC	1 cut(s)	1574
BsnI	GGCC	2 cut(s)	1725, 2283
Bso31I	GGTCTC	1 cut(s)	2268
Bsp119I	TTCGAA	2 cut(s)	1657, 2496
Bsp1286I	GDGCHC	2 cut(s)	1143, 2385
BspACI	CCGC	6 cut(s)	597, 1558, 1978, 2347, 2647, 2861
BspANI	GGCC	2 cut(s)	1725, 2283
BspCNI	CTCAG	4 cut(s)	1339, 1884, 1893, 2025
BspDI	ATCGAT	2 cut(s)	334, 2163
BspHI	TCATGA	1 cut(s)	2881
BspLI	GGNNCC	3 cut(s)	812, 1996, 2865
BspMAI	CTGCAG	2 cut(s)	2277, 2726
BspMI	ACCTGC	1 cut(s)	2831
BspPI	GGATC	5 cut(s)	44, 124, 805, 818, 1636
BspT104I	TTCGAA	2 cut(s)	1657, 2496
BspT107I	GGYRCC	1 cut(s)	1994
BspTI	CTTAAG	1 cut(s)	2464
BspTNI	GGTCTC	1 cut(s)	2268
BsrFI	RCCGGY	1 cut(s)	1168
BsrI	ACTGG	5 cut(s)	1482, 2061, 2451, 2489, 2712
BssAI	RCCGGY	1 cut(s)	1168
BssECI	CCNNGG	4 cut(s)	46, 133, 2521, 2814
BssNAI	GTATAC	1 cut(s)	1210
BssT1I	CCWWGG	3 cut(s)	46, 2521, 2814
Bst1107I	GTATAC	1 cut(s)	1210
Bst2UI	CCWGG	1 cut(s)	265
Bst4CI	ACNGT	5 cut(s)	22, 283, 1020, 1189, 2896
Bst6I	CTCTTC	4 cut(s)	792, 1073, 1618, 1711
BstAFI	CTTAAG	1 cut(s)	2464
BstAPI	GCANNNNNTGC	2 cut(s)	1925, 2843
BstBAI	YACGTR	1 cut(s)	1988
BstBI	TTCGAA	2 cut(s)	1657, 2496
BstDEI	CTNAG	8 cut(s)	1154, 1347, 1820, 1892, 1901, 2033, 2055, 2555
BstEII	GGTNACC	1 cut(s)	2429
BstF5I	GGATG	7 cut(s)	235, 597, 790, 959, 1717, 2572, 2712
BstHHI	GCGC	2 cut(s)	112, 2625
BstMAI	GTCTC	3 cut(s)	1547, 2268, 2853
BstMWI	GCNNNNNNNGC	6 cut(s)	118, 956, 1925, 2035, 2843, 2867
BstNI	CCWGG	1 cut(s)	265
BstNSI	RCATGY	1 cut(s)	2227
BstPAI	GACNNNNGTC	1 cut(s)	2111
BstPI	GGTNACC	1 cut(s)	2429
BstSCI	CCNGG	1 cut(s)	263
BstSFI	CTRYAG	3 cut(s)	805, 2273, 2722
BstSNI	TACGTA	1 cut(s)	1988
BstV1I	GCAGC	5 cut(s)	199, 2041, 2331, 2442, 2849
BstV2I	GAAGAC	4 cut(s)	1142, 1190, 1666, 2603
BstX2I	RGATCY	5 cut(s)	810, 1487, 1628, 1733, 1972
BstYI	RGATCY	5 cut(s)	810, 1487, 1628, 1733, 1972
BstZ17I	GTATAC	1 cut(s)	1210
Bsu15I	ATCGAT	2 cut(s)	334, 2163
Bsu36I	CCTNAGG	2 cut(s)	1347, 1892
BsuRI	GGCC	2 cut(s)	1725, 2283
BsuTUI	ATCGAT	2 cut(s)	334, 2163
BtsCI	GGATG	7 cut(s)	235, 597, 790, 959, 1717, 2572, 2712
BtsIMutI	CAGTG	1 cut(s)	2074
BveI	ACCTGC	1 cut(s)	2831
CciI	TCATGA	1 cut(s)	2881
CfoI	GCGC	2 cut(s)	112, 2625
Cfr10I	RCCGGY	1 cut(s)	1168
Cfr13I	GGNCC	2 cut(s)	838, 2864
ClaI	ATCGAT	2 cut(s)	334, 2163
CseI	GACGC	4 cut(s)	158, 554, 641, 2835
Csp6I	GTAC	6 cut(s)	182, 279, 1190, 1955, 1985, 1995
CviAII	CATG	6 cut(s)	775, 1355, 1547, 2224, 2602, 2882
CviQI	GTAC	6 cut(s)	182, 279, 1190, 1955, 1985, 1995
DdeI	CTNAG	8 cut(s)	1154, 1347, 1820, 1892, 1901, 2033, 2055, 2555
EaeI	YGGCCR	1 cut(s)	1723
Eam1104I	CTCTTC	4 cut(s)	792, 1073, 1618, 1711
EarI	CTCTTC	4 cut(s)	792, 1073, 1618, 1711
Ecl136II	GAGCTC	1 cut(s)	2383
Eco105I	TACGTA	1 cut(s)	1988
Eco130I	CCWWGG	3 cut(s)	46, 2521, 2814
Eco24I	GRGCYC	1 cut(s)	2385
Eco31I	GGTCTC	1 cut(s)	2268
Eco32I	GATATC	1 cut(s)	2232
Eco47I	GGWCC	2 cut(s)	838, 2864
Eco53kI	GAGCTC	1 cut(s)	2383
Eco57I	CTGAAG	6 cut(s)	27, 51, 1928, 2444, 2597, 2651
Eco81I	CCTNAGG	2 cut(s)	1347, 1892
Eco91I	GGTNACC	1 cut(s)	2429
EcoICRI	GAGCTC	1 cut(s)	2383
EcoO65I	GGTNACC	1 cut(s)	2429
EcoRI	GAATTC	1 cut(s)	871
EcoRII	CCWGG	1 cut(s)	263
EcoRV	GATATC	1 cut(s)	2232
EcoT14I	CCWWGG	3 cut(s)	46, 2521, 2814
EcoT38I	GRGCYC	1 cut(s)	2385
ErhI	CCWWGG	3 cut(s)	46, 2521, 2814
Esp3I	CGTCTC	2 cut(s)	1547, 2853
FaeI	CATG	6 cut(s)	778, 1358, 1550, 2227, 2605, 2885
FalI	AAGNNNNNCTT	2 cut(s)	427, 459
FaqI	GGGAC	1 cut(s)	1574
FatI	CATG	6 cut(s)	774, 1354, 1546, 2223, 2601, 2881
FauI	CCCGC	4 cut(s)	1551, 1971, 2640, 2854
FauNDI	CATATG	4 cut(s)	851, 1037, 1459, 2248
FbaI	TGATCA	2 cut(s)	1644, 2962
FblI	GTMKAC	3 cut(s)	1120, 1159, 1209
Fnu4HI	GCNGC	7 cut(s)	213, 598, 2030, 2345, 2348, 2456, 2838
FokI	GGATG	7 cut(s)	242, 604, 797, 946, 1724, 2579, 2719
FriOI	GRGCYC	1 cut(s)	2385
Fsp4HI	GCNGC	7 cut(s)	213, 598, 2030, 2345, 2348, 2456, 2838
FspBI	CTAG	7 cut(s)	179, 536, 572, 1883, 1970, 2199, 2607
FspI	TGCGCA	2 cut(s)	111, 2624
GlaI	GCGC	2 cut(s)	111, 2624
GluI	GCNGC	7 cut(s)	213, 598, 2030, 2345, 2348, 2456, 2838
GsaI	CCCAGC	1 cut(s)	1015
GsuI	CTGGAG	2 cut(s)	2372, 2468
HaeIII	GGCC	2 cut(s)	1725, 2283
HapII	CCGG	3 cut(s)	916, 1169, 2704
HgaI	GACGC	4 cut(s)	158, 554, 641, 2835
HhaI	GCGC	2 cut(s)	112, 2625
Hin1II	CATG	6 cut(s)	778, 1358, 1550, 2227, 2605, 2885
Hin6I	GCGC	2 cut(s)	110, 2623
HinP1I	GCGC	2 cut(s)	110, 2623
HincII	GTYRAC	1 cut(s)	1609
HindII	GTYRAC	1 cut(s)	1609
HpaI	GTTAAC	1 cut(s)	1609
HpaII	CCGG	3 cut(s)	916, 1169, 2704
HphI	GGTGA	7 cut(s)	443, 560, 562, 1540, 2303, 2441, 2885
Hpy166II	GTNNAC	6 cut(s)	1121, 1160, 1210, 1609, 1888, 1985
Hpy8I	GTNNAC	6 cut(s)	1121, 1160, 1210, 1609, 1888, 1985
HpyCH4III	ACNGT	5 cut(s)	22, 283, 1020, 1189, 2896
HpyCH4IV	ACGT	3 cut(s)	1534, 1987, 2108
HpyF10VI	GCNNNNNNNGC	6 cut(s)	118, 956, 1925, 2035, 2843, 2867
HpyF3I	CTNAG	8 cut(s)	1154, 1347, 1820, 1892, 1901, 2033, 2055, 2555
HpySE526I	ACGT	3 cut(s)	1534, 1987, 2108
Hsp92II	CATG	6 cut(s)	778, 1358, 1550, 2227, 2605, 2885
HspAI	GCGC	2 cut(s)	110, 2623
KpnI	GGTACC	1 cut(s)	1998
Ksp22I	TGATCA	2 cut(s)	1644, 2962
KspAI	GTTAAC	1 cut(s)	1609
LmnI	GCTCC	4 cut(s)	1351, 2026, 2388, 2818
Lsp1109I	GCAGC	5 cut(s)	199, 2041, 2331, 2442, 2849
LweI	GCATC	9 cut(s)	145, 199, 321, 968, 1060, 1089, 1140, 2263, 2697
MaeI	CTAG	7 cut(s)	179, 536, 572, 1883, 1970, 2199, 2607
MaeII	ACGT	3 cut(s)	1534, 1987, 2108
MaeIII	GTNAC	9 cut(s)	16, 404, 566, 1366, 1860, 2370, 2429, 2873, 2896
MfeI	CAATTG	4 cut(s)	187, 1434, 2124, 2697
MflI	RGATCY	5 cut(s)	810, 1487, 1628, 1733, 1972
MhlI	GDGCHC	2 cut(s)	1143, 2385
MlsI	TGGCCA	1 cut(s)	1725
MluNI	TGGCCA	1 cut(s)	1725
MlyI	GAGTC	7 cut(s)	96, 850, 1372, 1833, 1912, 2870, 2903
MmeI	TCCRAC	6 cut(s)	495, 795, 838, 1483, 2187, 2544
Mox20I	TGGCCA	1 cut(s)	1725
MscI	TGGCCA	1 cut(s)	1725
MslI	CAYNNNNRTG	2 cut(s)	779, 1136
Msp20I	TGGCCA	1 cut(s)	1725
MspA1I	CMGCKG	2 cut(s)	2032, 2870
MspCI	CTTAAG	1 cut(s)	2464
MspI	CCGG	3 cut(s)	916, 1169, 2704
MspR9I	CCNGG	1 cut(s)	265
MunI	CAATTG	4 cut(s)	187, 1434, 2124, 2697
MvaI	CCWGG	1 cut(s)	265
MwoI	GCNNNNNNNGC	6 cut(s)	118, 956, 1925, 2035, 2843, 2867
NdeI	CATATG	4 cut(s)	851, 1037, 1459, 2248
NlaIII	CATG	6 cut(s)	778, 1358, 1550, 2227, 2605, 2885
NlaIV	GGNNCC	3 cut(s)	812, 1996, 2865
NmeAIII	GCCGAG	1 cut(s)	2663
NmuCI	GTSAC	4 cut(s)	566, 2429, 2873, 2896
NsbI	TGCGCA	2 cut(s)	111, 2624
NspI	RCATGY	1 cut(s)	2227
NspV	TTCGAA	2 cut(s)	1657, 2496
PagI	TCATGA	1 cut(s)	2881
PaqCI	CACCTGC	1 cut(s)	2831
PciI	ACATGT	1 cut(s)	2223
PfeI	GAWTC	8 cut(s)	160, 239, 331, 888, 1879, 2498, 2718, 2888
PfoI	TCCNGGA	1 cut(s)	263
PkrI	GCNGC	7 cut(s)	214, 599, 2031, 2346, 2349, 2457, 2839
PleI	GAGTC	7 cut(s)	95, 850, 1372, 1832, 1911, 2870, 2903
PpsI	GAGTC	7 cut(s)	95, 850, 1372, 1832, 1911, 2870, 2903
Ppu21I	YACGTR	1 cut(s)	1988
PscI	ACATGT	1 cut(s)	2223
PshAI	GACNNNNGTC	1 cut(s)	2111
PshBI	ATTAAT	2 cut(s)	1203, 1442
Psp124BI	GAGCTC	1 cut(s)	2385
Psp1406I	AACGTT	1 cut(s)	1534
Psp6I	CCWGG	1 cut(s)	263
PspEI	GGTNACC	1 cut(s)	2429
PspFI	CCCAGC	1 cut(s)	1011
PspGI	CCWGG	1 cut(s)	263
PspN4I	GGNNCC	3 cut(s)	812, 1996, 2865
PspPI	GGNCC	2 cut(s)	838, 2864
PstI	CTGCAG	2 cut(s)	2277, 2726
PsuI	RGATCY	5 cut(s)	810, 1487, 1628, 1733, 1972
PvuII	CAGCTG	2 cut(s)	2032, 2870
RsaI	GTAC	6 cut(s)	183, 280, 1191, 1956, 1986, 1996
RsaNI	GTAC	6 cut(s)	182, 279, 1190, 1955, 1985, 1995
RseI	CAYNNNNRTG	2 cut(s)	779, 1136
SacI	GAGCTC	1 cut(s)	2385
SatI	GCNGC	7 cut(s)	213, 598, 2030, 2345, 2348, 2456, 2838
Sau96I	GGNCC	2 cut(s)	838, 2864
ScaI	AGTACT	1 cut(s)	1191
SchI	GAGTC	7 cut(s)	96, 850, 1372, 1833, 1912, 2870, 2903
ScrFI	CCNGG	1 cut(s)	265
SduI	GDGCHC	2 cut(s)	1143, 2385
SfaNI	GCATC	9 cut(s)	145, 199, 321, 968, 1060, 1089, 1140, 2263, 2697
SfcI	CTRYAG	3 cut(s)	805, 2273, 2722
SfuI	TTCGAA	2 cut(s)	1657, 2496
SinI	GGWCC	2 cut(s)	838, 2864
SmiMI	CAYNNNNRTG	2 cut(s)	779, 1136
SmlI	CTYRAG	5 cut(s)	79, 858, 2464, 2684, 2850
SmoI	CTYRAG	5 cut(s)	79, 858, 2464, 2684, 2850
SnaBI	TACGTA	1 cut(s)	1988
SpeI	ACTAGT	2 cut(s)	178, 535
SsiI	CCGC	6 cut(s)	597, 1558, 1978, 2347, 2647, 2861
SspI	AATATT	2 cut(s)	1201, 2633
SspMI	CTAG	7 cut(s)	179, 536, 572, 1883, 1970, 2199, 2607
SstI	GAGCTC	1 cut(s)	2385
StyD4I	CCNGG	1 cut(s)	263
StyI	CCWWGG	3 cut(s)	46, 2521, 2814
TaaI	ACNGT	5 cut(s)	22, 283, 1020, 1189, 2896
TaiI	ACGT	3 cut(s)	1537, 1990, 2111
TaqI	TCGA	7 cut(s)	334, 875, 1657, 2163, 2481, 2496, 2907
TaqII	GACCGA	1 cut(s)	2250
TatI	WGTACW	1 cut(s)	1189
TauI	GCSGC	2 cut(s)	600, 2350
TfiI	GAWTC	8 cut(s)	160, 239, 331, 888, 1879, 2498, 2718, 2888
TscAI	CASTG	1 cut(s)	2074
TseFI	GTSAC	4 cut(s)	566, 2429, 2873, 2896
TseI	GCWGC	5 cut(s)	212, 2029, 2344, 2455, 2837
Tsp45I	GTSAC	4 cut(s)	566, 2429, 2873, 2896
TspDTI	ATGAA	8 cut(s)	46, 186, 336, 657, 791, 801, 915, 1191
TspGWI	ACGGA	1 cut(s)	542
TspRI	CASTG	1 cut(s)	2074
Vha464I	CTTAAG	1 cut(s)	2464
VpaK11BI	GGWCC	2 cut(s)	838, 2864
VspI	ATTAAT	2 cut(s)	1203, 1442
XapI	RAATTY	6 cut(s)	74, 765, 871, 1757, 2020, 2543
XbaI	TCTAGA	1 cut(s)	1969
XceI	RCATGY	1 cut(s)	2227
XcmI	CCANNNNNNNNNTGG	1 cut(s)	778
XmiI	GTMKAC	3 cut(s)	1120, 1159, 1209
XspI	CTAG	7 cut(s)	179, 536, 572, 1883, 1970, 2199, 2607
ZrmI	AGTACT	1 cut(s)	1191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.