Rh3AG236300

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3A
Physical Location & Seq
Forward (+)
24449439 .. 24455963
6525 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3AG236300.1

Sequence Viewer

Length: 2850 bp
ATGGCTGAGGCTGTTGTTTCTTTTCTAGTGGAAAGAGTTGGTGACTACATCATTCAAGAAGGCAGACCCTTGTTCGGAGTTGGCAATCAAGTTAGGCGTGCACACAGAGACCTAGTATTCATCAAGGGCTTCCTCAAAGATGCAGACGCAAAGCAACGAGACAGTGAGGCAATACGCACTTTTGTTGCCCAAATTAGAGATGCTGCTTATGATTTGGAGGATGTCATTGAAGCTTTTGTCTTGAAGGTGGATTCCAGGAGGAAAGGAGGTATAAAGAATTTTTTGAAGAGGTTGGGATGCATCTTCGTTGAAGGAGTTCGCCGTTACAAGATTGGGTCAGAAATTGGGGTAATTACTATCACGATTTCTGATTTGAAGCAGGACTTGCAAACTTATGGTATCAAGGAGATGAGGGATTCCTCTACTTCCCTCCAATTGTGTGAAGCACAACAACTACTGAGGCGAACTTACACTCATGTTATTGATCGTAATGTGGTCGGGCTAGAGGATTCTGTCCATGAATTGGTTGGGCATTTGGTGAAGGAAGAGCATCGCCACCGAGTTGTTTCTATCATTGGGATGGGCGGATCTGGGAAAACAACTATTGCTAAACAAGTTTATCATCACAAAGGGGTAACAGACCATTTTGATTGTTTGGCTTGGGTTTGTATATCTCAACAATATCAAGTCAGGGATGTCTTGGAGAGGATTTATGTCAAACTTCTTTGCCCCACAAAAGAGGAGAGGGATGAAATTGCAAAATTGAAGGATGACGAAATACCAGGGAGGCTTTCTCGTCTCCAAAATGAAAAAAAATGTTTGATTGTCCTTGATGACATTTGGAAAAGAGAGACCTGGGACTTTTTGAAGGCTGCATTTGAATGCCATGAAGACTCAAAGAGCAGAATACTACTTACGACTCGCAATGAACAAGTAGCTTCGCATGCCGATGATAACGGTTTTCACTACCGACCTCCACCACTGAATGAGTCTGAGAGTTGGAAGCTGTTTGAGAAGATTGCAATGAGTGGAAGGAAAGCTGGAATAGATGCTGAAGTTTACACGAAGATGGAAGAATTAGGAAAAGAGATGGTTCAACATTGTAGGGGTCTGCCACTAGCTGTCATTGTACTTGCTGGACTTCTTGCCAGGAAAAACACAATTAAAGATTGGGAAACCATACAAGAAAATGTTGGTGTGTACATAAGTAGAGGCTTTGGCCGCCGGGAAGAAGAACATGCATATGCATCATGGGTGTTGGCGTTGAGTTATGATGACTTGCCATATCACTTAAAACCCTGTTTCCTATATTTAGGACATTTTCCCGAGGATCATGAGATCCGGATGAAGAGTTTGACAAGACTATGGATTGCAGAAGGTTTTATTTCTTTGACAAAACAAAGGCAAAGTTCAGGGGAAACAATGGAGGATGTGGCATACAATTGGTTGAATGAGTTGGTAGAAAGGTGTGTGATTCAAGTAGGAGAGAGAAGTTCAACTTTTGAGAATATTAAAACTTGCCGGATGCATGATCTTTTGAGAGATTTGTGTTTGAGAAAGGCGGAAGAGGAAAATTTTCTCCAAGTTGTCAAAGGTTCTCAAAAAAATGAGGCAATGCATCCAGTTTCTTCTTCTTCTTCCATGGTAACCTATGCATCACCAATGGGTAAGATTCGAAGACTTGCCGTCTACTTGGATGAGAATGATGATAAATTGGTACCCTCACTTAGGGAAAGAGGTGGGCACCTTAGGTCCTTGTTATATATTGGCCCCAATGATTTTCGTTGGTTTCCTAAAAGGAAAGAATTAATACCTTCCAAGTTCAAGGATTTCAAATTACTCAGAGCGTTGATGATTGAAGGTATGCATGATGGAGAAGTAAAAATAAAGCTGCCTAGAGAAATTGGAAACATGGTCCACTTGAGGTTTCTGAGTCTAAGGAGAAGTAATATAAAATCGTTTCCTCCGTTTCTAGGAAACTTGATTTGTTTGCAGACGCTTGATTTTTTTGTTAGAGATGACTACATGTTTATCCCAAATGTGATATGCAAGATGAATAAATTGAGACATTTATACCTTCCATGGAGGTACAGGGCTAGAGGTAAACTGCAGCTATCTGCTCTCGGTGATTTACAAACTTTAAATTATGTTTCGAGTAGATATTGTGATTTGAATGATCTTGCTAAACTAGGCAATCTAAGGAAACTGAGAATAAGATTGTCATCTAGCCAATCGAAAAATCTGGAGAAAATCTTGGATGCGGCAGGCTGCGTGCTCAATGGTATTCGGTCCCTGCGGTTGGTCAACCATGTTGGAATGAAAAGCGGTGCAGAGGTTAGTCAAATAGTTGCAAGGTGCAGTCAAATATACAAGTTGAAGCTATGGGGCCCCACACTAGAACTACCGAAAGAGTTCCACTCCTATTCAAACCTCACCAAGTTACTTTTGTCCGATTGTGCTCTCAAGGACGACCAAATGGCCATACTAGAGAAGCTGCCCAACCTGAAAAGTCTTGATCTGTGCGATAATGTGTTTGAGGAAAATACAAAAGTATTGGTTTTCTCTGCTGGAAGCTTTCCTCGTCTTCAGTTTCTTGAGCTTTATGCTTTGAAAGGAATAACAGAGTGGAGGGTGGAGGAAGGAGCCATGCCTTGTCTCTGCAAATTGATCATTGATTATTGCAGAGAATTGAGTACGGTTCCAAATGGGCTGAGACACCTTACTACACTCAAGGATTTGAAGATTGAGCATATGCCTAAACCATTCTGTAGTAAGCTTGAGGAAGGAGGAGAAGACTTCCATGAAGTCCAACACATCCCTTCCCTTATACTCCAGATTCCGAGGGATTAA

Protein Analysis

949

Amino Acids

109.17

Weight (kDa)

8.64

Isoelectric Point (pI)

45.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 88 9.4e-20 Rx N-terminal domain
NB-ARC PF00931 169 - 344 4.2e-42 NB-ARC domain
WHD_DRP PF23559 441 - 517 2.2e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 597 - 917 9e-38 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1717
AccB1I GGYRCC 2 cut(s) 1717, 1743
AccB7I CCANNNNNTGG 1 cut(s) 523
AccI GTMKAC 1 cut(s) 1689
AccIII TCCGGA 1 cut(s) 1341
AciI CCGC 6 cut(s) 585, 1222, 1562, 2261, 2296, 2325
AclWI GGATC 3 cut(s) 595, 1333, 1338
AcoI YGGCCR 2 cut(s) 1219, 2478
AcsI RAATTY 2 cut(s) 277, 1573
AcuI CTGAAG 2 cut(s) 1074, 2570
AfaI GTAC 5 cut(s) 1131, 1202, 1719, 2090, 2695
AfiI CCNNNNNNNGG 5 cut(s) 74, 523, 1728, 1973, 2299
AflIII ACRYGT 1 cut(s) 2025
AhdI GACNNNNNGTC 1 cut(s) 1685
AjnI CCWGG 4 cut(s) 254, 781, 854, 1148
Alw21I GWGCWC 3 cut(s) 103, 2277, 2461
Alw26I GTCTC 7 cut(s) 102, 153, 803, 845, 2059, 2660, 2707
Alw44I GTGCAC 1 cut(s) 99
AlwI GGATC 3 cut(s) 595, 1333, 1338
Ama87I CYCGRG 1 cut(s) 1325
Aor13HI TCCGGA 1 cut(s) 1341
AoxI GGCC 4 cut(s) 1219, 1768, 2386, 2478
ApaI GGGCCC 1 cut(s) 2390
ApaLI GTGCAC 1 cut(s) 99
ApeKI GCWGC 6 cut(s) 203, 872, 1891, 2110, 2268, 2494
ApoI RAATTY 2 cut(s) 277, 1573
AseI ATTAAT 1 cut(s) 1808
Asp700I GAANNNNTTC 3 cut(s) 315, 1575, 2411
Asp718I GGTACC 1 cut(s) 1717
AspS9I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2386, 2387
AsuC2I CCSGG 1 cut(s) 1226
AsuHPI GGTGA 5 cut(s) 53, 550, 1650, 2138, 2425
AsuII TTCGAA 1 cut(s) 1675
AvaI CYCGRG 1 cut(s) 1325
AvaII GGWCC 3 cut(s) 1752, 1915, 2289
AxyI CCTNAGG 1 cut(s) 1748
BaeGI GKGCMC 3 cut(s) 103, 1746, 2390
BalI TGGCCA 1 cut(s) 2480
BanI GGYRCC 2 cut(s) 1717, 1743
BanII GRGCYC 1 cut(s) 2390
BbsI GAAGAC 4 cut(s) 897, 1684, 2576, 2799
Bbv12I GWGCWC 3 cut(s) 103, 2277, 2461
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
BccI CCATC 4 cut(s) 574, 1063, 1084, 1865
BceAI ACGGC 2 cut(s) 306, 1670
BciT130I CCWGG 4 cut(s) 256, 783, 856, 1150
BclI TGATCA 1 cut(s) 2667
BcnI CCSGG 1 cut(s) 1226
BcoDI GTCTC 7 cut(s) 102, 153, 803, 845, 2059, 2660, 2707
BfmI CTRYAG 2 cut(s) 2108, 2767
BisI GCNGC 8 cut(s) 204, 873, 1222, 1892, 2111, 2262, 2269, 2495
BlsI GCNGC 8 cut(s) 205, 874, 1223, 1893, 2112, 2263, 2270, 2496
Bme1390I CCNGG 5 cut(s) 256, 783, 856, 1150, 1226
Bme18I GGWCC 3 cut(s) 1752, 1915, 2289
BmeRI GACNNNNNGTC 1 cut(s) 1685
BmeT110I CYCGRG 1 cut(s) 1325
BmgT120I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2386, 2387
BmiI GGNNCC 9 cut(s) 1719, 1745, 1771, 2291, 2387, 2388, 2389, 2644, 2700
BmrFI CCNGG 5 cut(s) 256, 783, 856, 1150, 1226
BpiI GAAGAC 4 cut(s) 897, 1684, 2576, 2799
BplI GAGNNNNNCTC 4 cut(s) 778, 810, 2402, 2434
BpmI CTGGAG 2 cut(s) 2264, 2816
Bpu10I CCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 1675
BpuEI CTTGAG 5 cut(s) 1942, 2447, 2615, 2714, 2798
BpuMI CCSGG 1 cut(s) 1226
BsaBI GATNNNNATC 1 cut(s) 2221
BsaI GGTCTC 2 cut(s) 102, 845
BsaJI CCNNGG 6 cut(s) 782, 855, 1326, 1641, 2081, 2840
BsaWI WCCGGW 1 cut(s) 1341
Bsc4I CCNNNNNNNGG 5 cut(s) 74, 523, 1728, 1973, 2299
Bse1I ACTGG 1 cut(s) 1622
Bse21I CCTNAGG 1 cut(s) 1748
Bse3DI GCAATG 3 cut(s) 931, 1029, 1620
Bse8I GATNNNNATC 1 cut(s) 2221
BseAI TCCGGA 1 cut(s) 1341
BseBI CCWGG 4 cut(s) 256, 783, 856, 1150
BseDI CCNNGG 6 cut(s) 782, 855, 1326, 1641, 2081, 2840
BseJI GATNNNNATC 1 cut(s) 2221
BseLI CCNNNNNNNGG 5 cut(s) 74, 523, 1728, 1973, 2299
BseMI GCAATG 3 cut(s) 931, 1029, 1620
BseMII CTCAG 6 cut(s) 449, 984, 1855, 1922, 2198, 2702
BseNI ACTGG 1 cut(s) 1622
BseRI GAGGAG 2 cut(s) 755, 2802
BseSI GKGCMC 3 cut(s) 103, 1746, 2390
BseXI GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
BsgI GTGCAG 2 cut(s) 2349, 2377
BshFI GGCC 4 cut(s) 1221, 1770, 2388, 2480
BshNI GGYRCC 2 cut(s) 1717, 1743
BsiHKAI GWGCWC 3 cut(s) 103, 2277, 2461
BsiHKCI CYCGRG 1 cut(s) 1325
BsiSI CCGG 3 cut(s) 1225, 1342, 1522
BslFI GGGAC 2 cut(s) 872, 2275
BslI CCNNNNNNNGG 5 cut(s) 74, 523, 1728, 1973, 2299
BsmAI GTCTC 7 cut(s) 102, 153, 803, 845, 2059, 2660, 2707
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 2 cut(s) 872, 2275
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 4 cut(s) 1221, 1770, 2388, 2480
Bso31I GGTCTC 2 cut(s) 102, 845
BsoBI CYCGRG 1 cut(s) 1325
Bsp119I TTCGAA 1 cut(s) 1675
Bsp120I GGGCCC 1 cut(s) 2386
Bsp1286I GDGCHC 5 cut(s) 103, 1746, 2277, 2390, 2461
Bsp13I TCCGGA 1 cut(s) 1341
Bsp1407I TGTACA 1 cut(s) 1200
Bsp143I GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
Bsp19I CCATGG 2 cut(s) 1641, 2081
BspACI CCGC 6 cut(s) 585, 1222, 1562, 2261, 2296, 2325
BspANI GGCC 4 cut(s) 1221, 1770, 2388, 2480
BspCNI CTCAG 6 cut(s) 450, 985, 1854, 1923, 2199, 2703
BspEI TCCGGA 1 cut(s) 1341
BspHI TCATGA 1 cut(s) 1333
BspLI GGNNCC 9 cut(s) 1719, 1745, 1771, 2291, 2387, 2388, 2389, 2644, 2700
BspMAI CTGCAG 1 cut(s) 2112
BspPI GGATC 3 cut(s) 595, 1333, 1338
BspQI GCTCTTC 1 cut(s) 540
BspT104I TTCGAA 1 cut(s) 1675
BspT107I GGYRCC 2 cut(s) 1717, 1743
BspTNI GGTCTC 2 cut(s) 102, 845
BsrDI GCAATG 3 cut(s) 931, 1029, 1620
BsrGI TGTACA 1 cut(s) 1200
BsrI ACTGG 1 cut(s) 1622
BssECI CCNNGG 6 cut(s) 782, 855, 1326, 1641, 2081, 2840
BssMI GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
BssT1I CCWWGG 2 cut(s) 1641, 2081
Bst2UI CCWGG 4 cut(s) 256, 783, 856, 1150
Bst4CI ACNGT 3 cut(s) 164, 959, 2698
Bst6I CTCTTC 4 cut(s) 281, 540, 1343, 1560
BstAPI GCANNNNNTGC 1 cut(s) 385
BstAUI TGTACA 1 cut(s) 1200
BstBI TTCGAA 1 cut(s) 1675
BstC8I GCNNGC 4 cut(s) 99, 945, 2266, 2273
BstDSI CCRYGG 2 cut(s) 1641, 2081
BstEII GGTNACC 1 cut(s) 1645
BstENI CCTNNNNNAGG 1 cut(s) 1726
BstKTI GATC 8 cut(s) 487, 590, 1333, 1341, 1534, 2179, 2518, 2670
BstMAI GTCTC 7 cut(s) 102, 153, 803, 845, 2059, 2660, 2707
BstMBI GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
BstMWI GCNNNNNNNGC 3 cut(s) 385, 944, 1221
BstNI CCWGG 4 cut(s) 256, 783, 856, 1150
BstNSI RCATGY 3 cut(s) 947, 1241, 2029
BstPI GGTNACC 1 cut(s) 1645
BstSCI CCNGG 5 cut(s) 254, 781, 854, 1148, 1224
BstSFI CTRYAG 2 cut(s) 2108, 2767
BstSLI GKGCMC 3 cut(s) 103, 1746, 2390
BstV1I GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
BstV2I GAAGAC 4 cut(s) 897, 1684, 2576, 2799
BstX2I RGATCY 2 cut(s) 587, 1338
BstYI RGATCY 2 cut(s) 587, 1338
Bsu36I CCTNAGG 1 cut(s) 1748
BsuRI GGCC 4 cut(s) 1221, 1770, 2388, 2480
BtgI CCRYGG 2 cut(s) 1641, 2081
BtgZI GCGATG 1 cut(s) 536
BtsIMutI CAGTG 2 cut(s) 169, 980
Cac8I GCNNGC 4 cut(s) 99, 945, 2266, 2273
CciI TCATGA 1 cut(s) 1333
Cfr13I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2386, 2387
CseI GACGC 2 cut(s) 155, 2005
Csp6I GTAC 5 cut(s) 1130, 1201, 1718, 2089, 2694
CviQI GTAC 5 cut(s) 1130, 1201, 1718, 2089, 2694
DpnI GATC 8 cut(s) 486, 589, 1332, 1340, 1533, 2178, 2517, 2669
DpnII GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
DraI TTTAAA 1 cut(s) 2142
DriI GACNNNNNGTC 1 cut(s) 1685
EaeI YGGCCR 2 cut(s) 1219, 2478
Eam1104I CTCTTC 4 cut(s) 281, 540, 1343, 1560
Eam1105I GACNNNNNGTC 1 cut(s) 1685
EarI CTCTTC 4 cut(s) 281, 540, 1343, 1560
EciI GGCGGA 2 cut(s) 600, 1577
Eco130I CCWWGG 2 cut(s) 1641, 2081
Eco24I GRGCYC 1 cut(s) 2390
Eco31I GGTCTC 2 cut(s) 102, 845
Eco47I GGWCC 3 cut(s) 1752, 1915, 2289
Eco57I CTGAAG 2 cut(s) 1074, 2570
Eco81I CCTNAGG 1 cut(s) 1748
Eco88I CYCGRG 1 cut(s) 1325
Eco91I GGTNACC 1 cut(s) 1645
EcoNI CCTNNNNNAGG 1 cut(s) 1726
EcoO109I RGGNCCY 3 cut(s) 1752, 2386, 2387
EcoO65I GGTNACC 1 cut(s) 1645
EcoRII CCWGG 4 cut(s) 254, 781, 854, 1148
EcoT14I CCWWGG 2 cut(s) 1641, 2081
EcoT22I ATGCAT 7 cut(s) 302, 1243, 1249, 1530, 1620, 1657, 1869
EcoT38I GRGCYC 1 cut(s) 2390
ErhI CCWWGG 2 cut(s) 1641, 2081
Esp3I CGTCTC 1 cut(s) 803
FalI AAGNNNNNCTT 4 cut(s) 368, 400, 1483, 1515
FaqI GGGAC 2 cut(s) 872, 2275
FauNDI CATATG 2 cut(s) 1243, 2751
FbaI TGATCA 1 cut(s) 2667
FblI GTMKAC 1 cut(s) 1689
Fnu4HI GCNGC 8 cut(s) 204, 873, 1222, 1892, 2111, 2262, 2269, 2495
FriOI GRGCYC 1 cut(s) 2390
Fsp4HI GCNGC 8 cut(s) 204, 873, 1222, 1892, 2111, 2262, 2269, 2495
GluI GCNGC 8 cut(s) 204, 873, 1222, 1892, 2111, 2262, 2269, 2495
GsuI CTGGAG 2 cut(s) 2264, 2816
HaeIII GGCC 4 cut(s) 1221, 1770, 2388, 2480
HapII CCGG 3 cut(s) 1225, 1342, 1522
HgaI GACGC 2 cut(s) 155, 2005
HincII GTYRAC 1 cut(s) 2305
HindII GTYRAC 1 cut(s) 2305
HindIII AAGCTT 3 cut(s) 231, 2572, 2774
HpaII CCGG 3 cut(s) 1225, 1342, 1522
HphI GGTGA 5 cut(s) 53, 550, 1650, 2138, 2425
Hpy166II GTNNAC 7 cut(s) 101, 1060, 1201, 1690, 1918, 2105, 2305
Hpy188I TCNGA 8 cut(s) 77, 340, 370, 994, 1844, 1932, 2452, 2841
Hpy8I GTNNAC 7 cut(s) 101, 1060, 1201, 1690, 1918, 2105, 2305
HpyCH4III ACNGT 3 cut(s) 164, 959, 2698
HpyF10VI GCNNNNNNNGC 3 cut(s) 385, 944, 1221
Kpn2I TCCGGA 1 cut(s) 1341
KpnI GGTACC 1 cut(s) 1721
Ksp22I TGATCA 1 cut(s) 2667
Kzo9I GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
LguI GCTCTTC 1 cut(s) 540
LmnI GCTCC 1 cut(s) 2642
Lsp1109I GCAGC 6 cut(s) 190, 859, 1878, 2122, 2255, 2481
MaeIII GTNAC 5 cut(s) 41, 323, 634, 1645, 2439
MalI GATC 8 cut(s) 486, 589, 1332, 1340, 1533, 2178, 2517, 2669
MboI GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
MfeI CAATTG 2 cut(s) 434, 1441
MflI RGATCY 2 cut(s) 587, 1338
MhlI GDGCHC 5 cut(s) 103, 1746, 2277, 2390, 2461
MlsI TGGCCA 1 cut(s) 2480
MluNI TGGCCA 1 cut(s) 2480
MlyI GAGTC 4 cut(s) 887, 913, 998, 1942
MmeI TCCRAC 3 cut(s) 980, 2293, 2833
Mox20I TGGCCA 1 cut(s) 2480
Mph1103I ATGCAT 7 cut(s) 302, 1243, 1249, 1530, 1620, 1657, 1869
MroI TCCGGA 1 cut(s) 1341
MroXI GAANNNNTTC 3 cut(s) 315, 1575, 2411
MscI TGGCCA 1 cut(s) 2480
MseI TTAA 6 cut(s) 1164, 1292, 1512, 1808, 2141, 2848
MslI CAYNNNNRTG 5 cut(s) 578, 880, 948, 1067, 1242
Msp20I TGGCCA 1 cut(s) 2480
MspI CCGG 3 cut(s) 1225, 1342, 1522
MspR9I CCNGG 5 cut(s) 256, 783, 856, 1150, 1226
MunI CAATTG 2 cut(s) 434, 1441
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 4 cut(s) 256, 783, 856, 1150
MwoI GCNNNNNNNGC 3 cut(s) 385, 944, 1221
NciI CCSGG 1 cut(s) 1226
NcoI CCATGG 2 cut(s) 1641, 2081
NdeI CATATG 2 cut(s) 1243, 2751
NdeII GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
NlaIV GGNNCC 9 cut(s) 1719, 1745, 1771, 2291, 2387, 2388, 2389, 2644, 2700
NmuCI GTSAC 1 cut(s) 41
NsiI ATGCAT 7 cut(s) 302, 1243, 1249, 1530, 1620, 1657, 1869
NspI RCATGY 3 cut(s) 947, 1241, 2029
NspV TTCGAA 1 cut(s) 1675
PaeI GCATGC 1 cut(s) 947
PagI TCATGA 1 cut(s) 1333
PciI ACATGT 1 cut(s) 2025
PciSI GCTCTTC 1 cut(s) 540
PcsI WCGNNNNNNNCGW 1 cut(s) 1964
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 3 cut(s) 315, 1575, 2411
PfeI GAWTC 6 cut(s) 251, 416, 509, 1474, 1672, 2836
PflMI CCANNNNNTGG 1 cut(s) 523
PfoI TCCNGGA 1 cut(s) 254
PkrI GCNGC 8 cut(s) 205, 874, 1223, 1893, 2112, 2263, 2270, 2496
PleI GAGTC 4 cut(s) 887, 913, 997, 1941
PpsI GAGTC 4 cut(s) 887, 913, 997, 1941
PpuMI RGGWCCY 1 cut(s) 1752
PscI ACATGT 1 cut(s) 2025
PshBI ATTAAT 1 cut(s) 1808
Psp5II RGGWCCY 1 cut(s) 1752
Psp6I CCWGG 4 cut(s) 254, 781, 854, 1148
PspEI GGTNACC 1 cut(s) 1645
PspGI CCWGG 4 cut(s) 254, 781, 854, 1148
PspN4I GGNNCC 9 cut(s) 1719, 1745, 1771, 2291, 2387, 2388, 2389, 2644, 2700
PspOMI GGGCCC 1 cut(s) 2386
PspPI GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2386, 2387
PspPPI RGGWCCY 1 cut(s) 1752
PstI CTGCAG 1 cut(s) 2112
PsuI RGATCY 2 cut(s) 587, 1338
RsaI GTAC 5 cut(s) 1131, 1202, 1719, 2090, 2695
RsaNI GTAC 5 cut(s) 1130, 1201, 1718, 2089, 2694
RseI CAYNNNNRTG 5 cut(s) 578, 880, 948, 1067, 1242
SapI GCTCTTC 1 cut(s) 540
SaqAI TTAA 6 cut(s) 1164, 1292, 1512, 1808, 2141, 2848
SatI GCNGC 8 cut(s) 204, 873, 1222, 1892, 2111, 2262, 2269, 2495
Sau3AI GATC 8 cut(s) 484, 587, 1330, 1338, 1531, 2176, 2515, 2667
Sau96I GGNCC 6 cut(s) 1752, 1769, 1915, 2289, 2386, 2387
SchI GAGTC 4 cut(s) 887, 913, 998, 1942
ScrFI CCNGG 5 cut(s) 256, 783, 856, 1150, 1226
SduI GDGCHC 5 cut(s) 103, 1746, 2277, 2390, 2461
SfcI CTRYAG 2 cut(s) 2108, 2767
SfuI TTCGAA 1 cut(s) 1675
SinI GGWCC 3 cut(s) 1752, 1915, 2289
SmiMI CAYNNNNRTG 5 cut(s) 578, 880, 948, 1067, 1242
SmlI CTYRAG 5 cut(s) 1921, 2462, 2594, 2729, 2777
SmoI CTYRAG 5 cut(s) 1921, 2462, 2594, 2729, 2777
SphI GCATGC 1 cut(s) 947
SsiI CCGC 6 cut(s) 585, 1222, 1562, 2261, 2296, 2325
SspI AATATT 1 cut(s) 1510
StyD4I CCNGG 5 cut(s) 254, 781, 854, 1148, 1224
StyI CCWWGG 2 cut(s) 1641, 2081
TaaI ACNGT 3 cut(s) 164, 959, 2698
TaqI TCGA 3 cut(s) 1675, 2153, 2234
TaqII GACCGA 1 cut(s) 2277
TatI WGTACW 2 cut(s) 1129, 1200
TauI GCSGC 2 cut(s) 1224, 2264
TfiI GAWTC 6 cut(s) 251, 416, 509, 1474, 1672, 2836
Tru1I TTAA 6 cut(s) 1164, 1292, 1512, 1808, 2141, 2848
Tru9I TTAA 6 cut(s) 1164, 1292, 1512, 1808, 2141, 2848
TscAI CASTG 2 cut(s) 169, 987
TseFI GTSAC 1 cut(s) 41
TseI GCWGC 6 cut(s) 203, 872, 1891, 2110, 2268, 2494
Tsp45I GTSAC 1 cut(s) 41
TspGWI ACGGA 1 cut(s) 1956
TspRI CASTG 2 cut(s) 169, 987
Van91I CCANNNNNTGG 1 cut(s) 523
VneI GTGCAC 1 cut(s) 99
VpaK11BI GGWCC 3 cut(s) 1752, 1915, 2289
VspI ATTAAT 1 cut(s) 1808
XagI CCTNNNNNAGG 1 cut(s) 1726
XapI RAATTY 2 cut(s) 277, 1573
XceI RCATGY 3 cut(s) 947, 1241, 2029
XcmI CCANNNNNNNNNTGG 1 cut(s) 524
XmiI GTMKAC 1 cut(s) 1689
XmnI GAANNNNTTC 3 cut(s) 315, 1575, 2411
Zsp2I ATGCAT 7 cut(s) 302, 1243, 1249, 1530, 1620, 1657, 1869
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.