Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000253.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

46049 .. 49494

Gene Structure 3446 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000253.1_g000015.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2979 bp

ctgatcgaaggtgttgttactgttgtggctgaagggatcaagcccctgggagatttcatcattcagcaagcgaagttcttgagtggagtcagctatcaagttgagcttgcacaagttgaacttcacttgatccggggctttctcagagatgcagatgcaagacaaggagacgaagaagtagaacgcatttgggttaaactgattagagatgctgcttatgacttggacgatatcattgaatcttttgcctttaaagtagcttccaggaggagaggaggtactgtgaagattgctctcaaaaggtttgccagcatctttaatgaaggagttaatcgatacaagattgggtccgaaattgaggatattatgaccaaactttctcatctgaggtccagtttgctgagttataatatcaggcaaataagtgggggtgaaggtatcgcttcttcttttaagaggcaactagaccggcggctaacttacgctcatgaagttgaaagtcatactgttgacttagaggaaaacacagatatactggttgaggagttggtgggagaaggaaagcgtcaccttgttgtttctatttgggggatgggaggctccggaaaaaccactcttgcaaaacaagtttttcgtcaaaatgaggtgaaacgtcattttgattgtttcgcttggatttgtatatctcaacaatgtgaaggcagagaggtcttcgaagaaattttaattaaactcacttccccaacaatagagaaaaggaaagaaatttccaaaatgaaaaaggatgaaatagcaatggaggtctgtagtatccaaagagaaaagagatgtctggtggtccttgatgacatatggactcaagaggcttggcattcgataaaagctggattcccaatcaatgaggaaacagagagccggatattactcactactcgcaagaaagaagtcgcctcgcttgcatccaaaaatgatcatctccaccaacctcgaccactagatgacaaccaaagctgggaactacttggaagtttatgcaaagaagaaagaatcaggaaagaagatgctcgtacattgttcaggtttgccattagccatcacttggaaatttatgcaaagaagagagaattaggaaagaagatgcttgtacattgttcaggtttacccttagccatcagtgtgcttgctggtcttcttagtagacgagagacagttgatgagtgggatacggtacttagaaatgttggtgtatacataatgagaggcacaaatgtccttgaaagagaaaagacaggtcaggggtgtggtgtttcaggtgtcttggcattgagttatgatgacttaccatctcacttaaaactatgctttttgtatttagcccaatttcctgaggatcatgagatacgggtaaaaagacttgctcaattatggattgcagaagggtttataacttcaacgtcagaaatgcatgtttcagtggaaagtttggaagaaatgtcatatagttgcttagttgaattggtggagagatctatggttcaagttgtagaatatggtttaagtgggaaggtgaaaacttgccgtctccatgattttatgcgagacttgtgcttgcgaaaggcagaagaggagaattttttccgaattattaatttttctgcgggactgatatctaagacagccctaattggcaaggttcgaagacttgccctctatttggacgaaaatgtgaaatatgatttcagtatagatggaagagatgaccacattaggtctctactatactttatcccaaaagggtttgaccaaaagtggaacagaaaaataatgcgatcagtattcaatgacttcaaattgcttagagttctgaagtttgaaaatatagagagagaatttcagttgccgaaaacgattgggaatctagtccacttgaggtttctgagtctgaagcatagtgcatatcgtgggttgccatcatctgtatctaagctggtacttttgcaaactctagatctgcggtataattatttatatgaaggattttgttttggtcgggagagggcgaccagaatcagaaatgtgttttggaatatggagcaactgaggcatttatatttaccttggagtcactatataagtgaacagaaactgtcatttgcaaggctgtgcaatttgcagacgttgggtgatatttcaattgagaaatgtgatttgaatgaccttgttcagttaaccaatctgaagaaaatatccataattgtatcacagcctagtcacttggaaaagttcaagaacatgttgatattaagaagtattacatatgagcatcttcgatcactatctttgaagttaaaccgagatgataatgaggatatagcaagagatatagtattaaggtgtcctcatatatacaagctgcgactggttgggaaaatgacggagtttccaaaagagctcctggactatccaaacctcatcaagataacgctggttagtaccaaattgaggtgtgaccagatagaaatactgaagatgttgcccaagttaagggtgctttacctgggtaagaatgctttcgaatcaaaaacaatggttttctctccaggaggctttcctcatctggaatttcttacccttagtgctttgtttatgttgaacgagtggagggtggagaaagaagccatgcctagtcttcagagattgcatattgaatggtgcctacatttatgggaagttccagatgggcttcagcatattactaccctcaaggaattaacaatcaacgtgatgaccggtagattctgcagtagggttggggaaggaggagaggatttctacaaaattaaacatgtgccttctattataatcacaaatattgaacccgactacaagaaagacaaggagccagaaatggaggaagcagcaggtgcgtctcgagtagttgctaatgactctgaggaatcaactgtggacggtatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

992

Amino Acids

114.56

Weight (kDa)

7.98

Isoelectric Point (pI)

46.47

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	408, 1445, 2861
AarI	CACCTGC	1 cut(s)	2912
Acc36I	ACCTGC	1 cut(s)	2912
AccB1I	GGYRCC	1 cut(s)	2712
AccB7I	CCANNNNNTGG	1 cut(s)	1099
AccI	GTMKAC	2 cut(s)	1198, 1248
AccIII	TCCGGA	1 cut(s)	602
AciI	CCGC	3 cut(s)	472, 1658, 2014
AclWI	GGATC	3 cut(s)	44, 124, 1398
AcsI	RAATTY	6 cut(s)	720, 765, 1104, 1630, 1889, 2621
AcuI	CTGAAG	7 cut(s)	51, 1886, 1964, 2258, 2546, 2675, 2729
AfaI	GTAC	6 cut(s)	280, 1069, 1146, 1230, 1992, 2494
AfiI	CCNNNNNNNGG	5 cut(s)	1012, 1099, 1714, 2502, 2544
AflIII	ACRYGT	2 cut(s)	2292, 2845
AgeI	ACCGGT	1 cut(s)	2789
AjnI	CCWGG	5 cut(s)	45, 263, 2454, 2556, 2599
AjuI	GAANNNNNNNTTGG	2 cut(s)	2065, 2097
AluBI	AGCT	8 cut(s)	93, 106, 260, 884, 1011, 1987, 2413, 2452
AluI	AGCT	8 cut(s)	93, 106, 260, 884, 1011, 1987, 2413, 2452
Alw21I	GWGCWC	1 cut(s)	2454
Alw26I	GTCTC	6 cut(s)	162, 1199, 1586, 1593, 1776, 2934
AlwI	GGATC	3 cut(s)	44, 124, 1398
AlwNI	CAGNNNCTG	1 cut(s)	2146
Ama87I	CYCGRG	1 cut(s)	2931
Aor13HI	TCCGGA	1 cut(s)	602
ApeKI	GCWGC	3 cut(s)	212, 2413, 2918
ApoI	RAATTY	6 cut(s)	720, 765, 1104, 1630, 1889, 2621
AseI	ATTAAT	1 cut(s)	1647
AsiGI	ACCGGT	1 cut(s)	2789
Asp700I	GAANNNNTTC	2 cut(s)	1634, 2570
AspS9I	GGNCC	3 cut(s)	348, 390, 838
AsuC2I	CCSGG	1 cut(s)	134
AsuHPI	GGTGA	5 cut(s)	443, 560, 658, 1579, 2195
AsuII	TTCGAA	3 cut(s)	714, 1696, 2574
AvaI	CYCGRG	1 cut(s)	2931
AvaII	GGWCC	3 cut(s)	348, 390, 838
AxyI	CCTNAGG	1 cut(s)	1386
BanI	GGYRCC	1 cut(s)	2712
BanII	GRGCYC	1 cut(s)	2454
BarI	GAAGNNNNNNTAC	2 cut(s)	430, 462
BbsI	GAAGAC	4 cut(s)	703, 1181, 1705, 2681
Bbv12I	GWGCWC	1 cut(s)	2454
BbvI	GCAGC	3 cut(s)	199, 2400, 2930
BccI	CCATC	7 cut(s)	586, 1101, 1178, 1351, 1742, 1978, 2732
BceAI	ACGGC	1 cut(s)	1563
BcgI	CGANNNNNNTGC	2 cut(s)	1587, 1621
BciT130I	CCWGG	5 cut(s)	47, 265, 2456, 2558, 2601
BciVI	GTATCC	2 cut(s)	821, 1216
BclI	TGATCA	1 cut(s)	970
BcnI	CCSGG	1 cut(s)	134
BcoDI	GTCTC	6 cut(s)	162, 1199, 1586, 1593, 1776, 2934
BfaI	CTAG	6 cut(s)	464, 995, 1919, 2006, 2268, 2685
BfmI	CTRYAG	2 cut(s)	805, 2800
BfuAI	ACCTGC	1 cut(s)	2912
BfuI	GTATCC	2 cut(s)	821, 1216
BglII	AGATCT	2 cut(s)	1526, 2008
BisI	GCNGC	4 cut(s)	213, 473, 2414, 2919
BlsI	GCNGC	4 cut(s)	214, 474, 2415, 2920
Bme1390I	CCNGG	6 cut(s)	47, 134, 265, 2456, 2558, 2601
Bme18I	GGWCC	3 cut(s)	348, 390, 838
BmeT110I	CYCGRG	1 cut(s)	2931
BmgT120I	GGNCC	3 cut(s)	348, 390, 838
BmiI	GGNNCC	4 cut(s)	349, 601, 2714, 2901
BmrFI	CCNGG	6 cut(s)	47, 134, 265, 2456, 2558, 2601
BmsI	GCATC	8 cut(s)	139, 145, 199, 321, 968, 1051, 1128, 2332
BpiI	GAAGAC	4 cut(s)	703, 1181, 1705, 2681
BpmI	CTGGAG	1 cut(s)	2583
Bpu10I	CCTNAGC	1 cut(s)	1165
Bpu14I	TTCGAA	3 cut(s)	714, 1696, 2574
BpuEI	CTTGAG	4 cut(s)	100, 843, 1948, 2747
BpuMI	CCSGG	1 cut(s)	134
Bsa29I	ATCGAT	1 cut(s)	334
BsaBI	GATNNNNATC	1 cut(s)	2335
BsaI	GGTCTC	1 cut(s)	1776
BsaJI	CCNNGG	5 cut(s)	45, 46, 133, 2117, 2557
BsaWI	WCCGGW	2 cut(s)	602, 2789
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 267, 292, 297
Bsc4I	CCNNNNNNNGG	5 cut(s)	1012, 1099, 1714, 2502, 2544
Bse118I	RCCGGY	2 cut(s)	468, 2789
Bse1I	ACTGG	3 cut(s)	393, 540, 2424
Bse21I	CCTNAGG	1 cut(s)	1386
Bse3DI	GCAATG	1 cut(s)	801
Bse8I	GATNNNNATC	1 cut(s)	2335
BseAI	TCCGGA	1 cut(s)	602
BseBI	CCWGG	5 cut(s)	47, 265, 2456, 2558, 2601
BseCI	ATCGAT	1 cut(s)	334
BseDI	CCNNGG	5 cut(s)	45, 46, 133, 2117, 2557
BseGI	GGATG	3 cut(s)	597, 790, 959
BseJI	GATNNNNATC	1 cut(s)	2335
BseLI	CCNNNNNNNGG	5 cut(s)	1012, 1099, 1714, 2502, 2544
BseMI	GCAATG	1 cut(s)	801
BseMII	CTCAG	7 cut(s)	157, 377, 392, 1377, 1928, 2090, 2943
BseNI	ACTGG	3 cut(s)	393, 540, 2424
BseRI	GAGGAG	5 cut(s)	283, 288, 557, 1640, 2835
BseXI	GCAGC	3 cut(s)	199, 2400, 2930
BseYI	CCCAGC	1 cut(s)	1011
BshNI	GGYRCC	1 cut(s)	2712
BshTI	ACCGGT	1 cut(s)	2789
BshVI	ATCGAT	1 cut(s)	334
BsiHKAI	GWGCWC	1 cut(s)	2454
BsiHKCI	CYCGRG	1 cut(s)	2931
BsiSI	CCGG	5 cut(s)	133, 469, 603, 916, 2790
BslFI	GGGAC	1 cut(s)	1674
BslI	CCNNNNNNNGG	5 cut(s)	1012, 1099, 1714, 2502, 2544
BsmAI	GTCTC	6 cut(s)	162, 1199, 1586, 1593, 1776, 2934
BsmBI	CGTCTC	3 cut(s)	162, 1586, 2934
BsmFI	GGGAC	1 cut(s)	1674
BsmI	GAATGC	2 cut(s)	871, 2572
Bso31I	GGTCTC	1 cut(s)	1776
BsoBI	CYCGRG	1 cut(s)	2931
Bsp119I	TTCGAA	3 cut(s)	714, 1696, 2574
Bsp1286I	GDGCHC	1 cut(s)	2454
Bsp13I	TCCGGA	1 cut(s)	602
Bsp1407I	TGTACA	1 cut(s)	1144
Bsp143I	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
BspACI	CCGC	3 cut(s)	472, 1658, 2014
BspCNI	CTCAG	7 cut(s)	156, 378, 393, 1378, 1929, 2091, 2944
BspDI	ATCGAT	1 cut(s)	334
BspEI	TCCGGA	1 cut(s)	602
BspHI	TCATGA	2 cut(s)	487, 1393
BspLI	GGNNCC	4 cut(s)	349, 601, 2714, 2901
BspMAI	CTGCAG	1 cut(s)	2804
BspMI	ACCTGC	1 cut(s)	2912
BspPI	GGATC	3 cut(s)	44, 124, 1398
BspT104I	TTCGAA	3 cut(s)	714, 1696, 2574
BspT107I	GGYRCC	1 cut(s)	2712
BspTNI	GGTCTC	1 cut(s)	1776
BsrDI	GCAATG	1 cut(s)	801
BsrFI	RCCGGY	2 cut(s)	468, 2789
BsrGI	TGTACA	1 cut(s)	1144
BsrI	ACTGG	3 cut(s)	393, 540, 2424
BssAI	RCCGGY	2 cut(s)	468, 2789
BssECI	CCNNGG	5 cut(s)	45, 46, 133, 2117, 2557
BssMI	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
BssNAI	GTATAC	1 cut(s)	1249
BssT1I	CCWWGG	1 cut(s)	2117
Bst1107I	GTATAC	1 cut(s)	1249
Bst2UI	CCWGG	5 cut(s)	47, 265, 2456, 2558, 2601
Bst4CI	ACNGT	8 cut(s)	22, 283, 508, 1210, 1228, 2148, 2965, 2972
Bst6I	CTCTTC	3 cut(s)	1112, 1617, 1747
BstAPI	GCANNNNNTGC	1 cut(s)	2924
BstAUI	TGTACA	1 cut(s)	1144
BstBI	TTCGAA	3 cut(s)	714, 1696, 2574
BstC8I	GCNNGC	6 cut(s)	69, 108, 310, 957, 1182, 1610
BstF5I	GGATG	3 cut(s)	597, 790, 959
BstKTI	GATC	9 cut(s)	6, 39, 132, 973, 1393, 1529, 1832, 2011, 2333
BstMAI	GTCTC	6 cut(s)	162, 1199, 1586, 1593, 1776, 2934
BstMBI	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
BstMWI	GCNNNNNNNGC	3 cut(s)	956, 2101, 2924
BstNI	CCWGG	5 cut(s)	47, 265, 2456, 2558, 2601
BstNSI	RCATGY	3 cut(s)	1469, 2296, 2849
BstSCI	CCNGG	6 cut(s)	45, 132, 263, 2454, 2556, 2599
BstSFI	CTRYAG	2 cut(s)	805, 2800
BstV1I	GCAGC	3 cut(s)	199, 2400, 2930
BstV2I	GAAGAC	4 cut(s)	703, 1181, 1705, 2681
BstX2I	RGATCY	2 cut(s)	1526, 2008
BstYI	RGATCY	2 cut(s)	1526, 2008
BstZ17I	GTATAC	1 cut(s)	1249
Bsu15I	ATCGAT	1 cut(s)	334
Bsu36I	CCTNAGG	1 cut(s)	1386
BsuI	GTATCC	2 cut(s)	821, 1216
BsuTUI	ATCGAT	1 cut(s)	334
BtsCI	GGATG	3 cut(s)	597, 790, 959
BtsIMutI	CAGTG	2 cut(s)	1180, 1479
BveI	ACCTGC	1 cut(s)	2912
Cac8I	GCNNGC	6 cut(s)	69, 108, 310, 957, 1182, 1610
CaiI	CAGNNNCTG	1 cut(s)	2146
CciI	TCATGA	2 cut(s)	487, 1393
Cfr10I	RCCGGY	2 cut(s)	468, 2789
Cfr13I	GGNCC	3 cut(s)	348, 390, 838
ClaI	ATCGAT	1 cut(s)	334
CseI	GACGC	2 cut(s)	554, 2916
Csp6I	GTAC	6 cut(s)	279, 1068, 1145, 1229, 1991, 2493
CspAI	ACCGGT	1 cut(s)	2789
CviAII	CATG	7 cut(s)	488, 1394, 1466, 1586, 2293, 2680, 2846
CviQI	GTAC	6 cut(s)	279, 1068, 1145, 1229, 1991, 2493
DpnI	GATC	9 cut(s)	5, 38, 131, 972, 1392, 1528, 1831, 2010, 2332
DpnII	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
DraI	TTTAAA	1 cut(s)	253
Eam1104I	CTCTTC	3 cut(s)	1112, 1617, 1747
EarI	CTCTTC	3 cut(s)	1112, 1617, 1747
Ecl136II	GAGCTC	1 cut(s)	2452
Eco130I	CCWWGG	1 cut(s)	2117
Eco24I	GRGCYC	1 cut(s)	2454
Eco31I	GGTCTC	1 cut(s)	1776
Eco32I	GATATC	2 cut(s)	232, 1668
Eco47I	GGWCC	3 cut(s)	348, 390, 838
Eco53kI	GAGCTC	1 cut(s)	2452
Eco57I	CTGAAG	7 cut(s)	51, 1886, 1964, 2258, 2546, 2675, 2729
Eco81I	CCTNAGG	1 cut(s)	1386
Eco88I	CYCGRG	1 cut(s)	2931
EcoICRI	GAGCTC	1 cut(s)	2452
EcoRII	CCWGG	5 cut(s)	45, 263, 2454, 2556, 2599
EcoRV	GATATC	2 cut(s)	232, 1668
EcoT14I	CCWWGG	1 cut(s)	2117
EcoT22I	ATGCAT	1 cut(s)	1467
EcoT38I	GRGCYC	1 cut(s)	2454
ErhI	CCWWGG	1 cut(s)	2117
Esp3I	CGTCTC	3 cut(s)	162, 1586, 2934
FaeI	CATG	7 cut(s)	491, 1397, 1469, 1589, 2296, 2683, 2849
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 105, 137
FaqI	GGGAC	1 cut(s)	1674
FatI	CATG	7 cut(s)	487, 1393, 1465, 1585, 2292, 2679, 2845
FauI	CCCGC	1 cut(s)	1651
FauNDI	CATATG	2 cut(s)	851, 2317
FbaI	TGATCA	1 cut(s)	970
FblI	GTMKAC	2 cut(s)	1198, 1248
Fnu4HI	GCNGC	4 cut(s)	213, 473, 2414, 2919
FokI	GGATG	3 cut(s)	604, 797, 946
FriOI	GRGCYC	1 cut(s)	2454
Fsp4HI	GCNGC	4 cut(s)	213, 473, 2414, 2919
FspBI	CTAG	6 cut(s)	464, 995, 1919, 2006, 2268, 2685
GluI	GCNGC	4 cut(s)	213, 473, 2414, 2919
GsaI	CCCAGC	1 cut(s)	1015
GsuI	CTGGAG	1 cut(s)	2583
HapII	CCGG	5 cut(s)	133, 469, 603, 916, 2790
HgaI	GACGC	2 cut(s)	554, 2916
Hin1II	CATG	7 cut(s)	491, 1397, 1469, 1589, 2296, 2683, 2849
HincII	GTYRAC	2 cut(s)	511, 2229
HindII	GTYRAC	2 cut(s)	511, 2229
HpaI	GTTAAC	1 cut(s)	2229
HpaII	CCGG	5 cut(s)	133, 469, 603, 916, 2790
HphI	GGTGA	5 cut(s)	443, 560, 658, 1579, 2195
Hpy166II	GTNNAC	8 cut(s)	511, 1160, 1199, 1249, 1924, 2138, 2229, 2968
Hpy8I	GTNNAC	8 cut(s)	511, 1160, 1199, 1249, 1924, 2138, 2229, 2968
HpyCH4III	ACNGT	8 cut(s)	22, 283, 508, 1210, 1228, 2148, 2965, 2972
HpyCH4IV	ACGT	4 cut(s)	652, 1454, 2177, 2781
HpyF10VI	GCNNNNNNNGC	3 cut(s)	956, 2101, 2924
HpySE526I	ACGT	4 cut(s)	652, 1454, 2177, 2781
Hsp92II	CATG	7 cut(s)	491, 1397, 1469, 1589, 2296, 2683, 2849
Kpn2I	TCCGGA	1 cut(s)	602
Ksp22I	TGATCA	1 cut(s)	970
KspAI	GTTAAC	1 cut(s)	2229
Kzo9I	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
LmnI	GCTCC	4 cut(s)	605, 2092, 2457, 2899
Lsp1109I	GCAGC	3 cut(s)	199, 2400, 2930
LweI	GCATC	8 cut(s)	139, 145, 199, 321, 968, 1051, 1128, 2332
MaeI	CTAG	6 cut(s)	464, 995, 1919, 2006, 2268, 2685
MaeII	ACGT	4 cut(s)	652, 1454, 2177, 2781
MaeIII	GTNAC	5 cut(s)	16, 566, 2123, 2270, 2507
MalI	GATC	9 cut(s)	5, 38, 131, 972, 1392, 1528, 1831, 2010, 2332
MboI	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
MfeI	CAATTG	1 cut(s)	2193
MflI	RGATCY	2 cut(s)	1526, 2008
MhlI	GDGCHC	1 cut(s)	2454
MlyI	GAGTC	5 cut(s)	96, 850, 1948, 2131, 2942
Mph1103I	ATGCAT	1 cut(s)	1467
MroI	TCCGGA	1 cut(s)	602
MroXI	GAANNNNTTC	2 cut(s)	1634, 2570
MslI	CAYNNNNRTG	1 cut(s)	1175
MspI	CCGG	5 cut(s)	133, 469, 603, 916, 2790
MspR9I	CCNGG	6 cut(s)	47, 134, 265, 2456, 2558, 2601
MunI	CAATTG	1 cut(s)	2193
Mva1269I	GAATGC	2 cut(s)	871, 2572
MvaI	CCWGG	5 cut(s)	47, 265, 2456, 2558, 2601
MwoI	GCNNNNNNNGC	3 cut(s)	956, 2101, 2924
NciI	CCSGG	1 cut(s)	134
NdeI	CATATG	2 cut(s)	851, 2317
NdeII	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
NlaIII	CATG	7 cut(s)	491, 1397, 1469, 1589, 2296, 2683, 2849
NlaIV	GGNNCC	4 cut(s)	349, 601, 2714, 2901
NmuCI	GTSAC	4 cut(s)	566, 2123, 2270, 2507
NsiI	ATGCAT	1 cut(s)	1467
NspI	RCATGY	3 cut(s)	1469, 2296, 2849
NspV	TTCGAA	3 cut(s)	714, 1696, 2574
PacI	TTAATTAA	1 cut(s)	729
PaeR7I	CTCGAG	1 cut(s)	2931
PagI	TCATGA	2 cut(s)	487, 1393
PaqCI	CACCTGC	1 cut(s)	2912
PasI	CCCWGGG	1 cut(s)	46
PciI	ACATGT	2 cut(s)	2292, 2845
PctI	GAATGC	2 cut(s)	871, 2572
PdmI	GAANNNNTTC	2 cut(s)	1634, 2570
PfeI	GAWTC	8 cut(s)	239, 888, 1047, 1915, 2067, 2576, 2796, 2957
PflMI	CCANNNNNTGG	1 cut(s)	1099
PfoI	TCCNGGA	3 cut(s)	263, 2454, 2599
PinAI	ACCGGT	1 cut(s)	2789
PkrI	GCNGC	4 cut(s)	214, 474, 2415, 2920
PleI	GAGTC	5 cut(s)	95, 850, 1947, 2130, 2942
PpsI	GAGTC	5 cut(s)	95, 850, 1947, 2130, 2942
PscI	ACATGT	2 cut(s)	2292, 2845
PshBI	ATTAAT	1 cut(s)	1647
PsiI	TTATAA	3 cut(s)	408, 1445, 2861
Psp124BI	GAGCTC	1 cut(s)	2454
Psp6I	CCWGG	5 cut(s)	45, 263, 2454, 2556, 2599
PspFI	CCCAGC	1 cut(s)	1011
PspGI	CCWGG	5 cut(s)	45, 263, 2454, 2556, 2599
PspN4I	GGNNCC	4 cut(s)	349, 601, 2714, 2901
PspPI	GGNCC	3 cut(s)	348, 390, 838
PstI	CTGCAG	1 cut(s)	2804
PstNI	CAGNNNCTG	1 cut(s)	2146
PsuI	RGATCY	2 cut(s)	1526, 2008
RsaI	GTAC	6 cut(s)	280, 1069, 1146, 1230, 1992, 2494
RsaNI	GTAC	6 cut(s)	279, 1068, 1145, 1229, 1991, 2493
RseI	CAYNNNNRTG	1 cut(s)	1175
SacI	GAGCTC	1 cut(s)	2454
SatI	GCNGC	4 cut(s)	213, 473, 2414, 2919
Sau3AI	GATC	9 cut(s)	3, 36, 129, 970, 1390, 1526, 1829, 2008, 2330
Sau96I	GGNCC	3 cut(s)	348, 390, 838
SchI	GAGTC	5 cut(s)	96, 850, 1948, 2131, 2942
ScrFI	CCNGG	6 cut(s)	47, 134, 265, 2456, 2558, 2601
SduI	GDGCHC	1 cut(s)	2454
SfaNI	GCATC	8 cut(s)	139, 145, 199, 321, 968, 1051, 1128, 2332
SfcI	CTRYAG	2 cut(s)	805, 2800
Sfr274I	CTCGAG	1 cut(s)	2931
SfuI	TTCGAA	3 cut(s)	714, 1696, 2574
SinI	GGWCC	3 cut(s)	348, 390, 838
SlaI	CTCGAG	1 cut(s)	2931
SmiMI	CAYNNNNRTG	1 cut(s)	1175
SmlI	CTYRAG	5 cut(s)	79, 858, 1927, 2762, 2931
SmoI	CTYRAG	5 cut(s)	79, 858, 1927, 2762, 2931
SsiI	CCGC	3 cut(s)	472, 1658, 2014
SspI	AATATT	1 cut(s)	2872
SspMI	CTAG	6 cut(s)	464, 995, 1919, 2006, 2268, 2685
SstI	GAGCTC	1 cut(s)	2454
StyD4I	CCNGG	6 cut(s)	45, 132, 263, 2454, 2556, 2599
StyI	CCWWGG	1 cut(s)	2117
TaaI	ACNGT	8 cut(s)	22, 283, 508, 1210, 1228, 2148, 2965, 2972
TaiI	ACGT	4 cut(s)	655, 1457, 2180, 2784
TaqI	TCGA	9 cut(s)	6, 334, 714, 875, 988, 1696, 2329, 2574, 2932
TatI	WGTACW	1 cut(s)	1144
TauI	GCSGC	1 cut(s)	475
TfiI	GAWTC	8 cut(s)	239, 888, 1047, 1915, 2067, 2576, 2796, 2957
TscAI	CASTG	2 cut(s)	1180, 1479
TseFI	GTSAC	4 cut(s)	566, 2123, 2270, 2507
TseI	GCWGC	3 cut(s)	212, 2413, 2918
Tsp45I	GTSAC	4 cut(s)	566, 2123, 2270, 2507
TspDTI	ATGAA	6 cut(s)	46, 336, 504, 791, 801, 2046
TspGWI	ACGGA	1 cut(s)	2450
TspRI	CASTG	2 cut(s)	1180, 1479
Van91I	CCANNNNNTGG	1 cut(s)	1099
VpaK11BI	GGWCC	3 cut(s)	348, 390, 838
VspI	ATTAAT	1 cut(s)	1647
XapI	RAATTY	6 cut(s)	720, 765, 1104, 1630, 1889, 2621
XbaI	TCTAGA	1 cut(s)	2005
XceI	RCATGY	3 cut(s)	1469, 2296, 2849
XhoI	CTCGAG	1 cut(s)	2931
XmiI	GTMKAC	2 cut(s)	1198, 1248
XmnI	GAANNNNTTC	2 cut(s)	1634, 2570
XspI	CTAG	6 cut(s)	464, 995, 1919, 2006, 2268, 2685
Zsp2I	ATGCAT	1 cut(s)	1467

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.