Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr07

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

9843172 .. 9849379

Gene Structure 6208 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD07G1092600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2928 bp

ATGGCTGAGGCGGTAGTTTCAATGGTAATTGAAGGGCTCAAAGGCGGTCTCATTGAGGAGGTGAAGTTCTTGAGCGGAGTTGGCGATCAAATTAAGCATGCACAAATTGAGCTACTTTTGATGCAGGGCTTCCTGAAAGATGCAGATACAAGACAAGAAGACAATGAAGTACGCATTTGGGTTCAAATTATAAGAGATGCTGCTTATGATTTGGAGGATGTCATTGAATCTTTTGCTTTGAAAGTGGCTCTCAGAAGGGGAGGAAGCGTGAAGCTTGTTCTGAAAAGGTTTGCTTGCATCTTTAACGAAGTCTATAATCGTCACAAGTTCGGTTCAGAAATTGAGAGCATTACCACCAAACTTTCCAAATTGAGGTTGAGTTTGCAAGGTTATGACATCAAGCAAATAAGGGGCACACAATATGGAGGTGCCACTTCTTTTGAGAGGCAAAAGGAACAAAGGGAAACTTATCCTCATGTTATTGAACGTGATGTTGTCGGGTTAGAGAAGGACATAGAGATACTAGTCACGCAATTGGTGAAAGAAGAAAAAGGCCCCAAACTTGTATCTATTTGGGGGATGGGCGGTTCAGGAAAGACCACTCTTGCAAAACAAGTTTATGGTCACAATGAAGATGTTAAGCGTCACTTCGATTGTTTTGCTTGGGTGTGTGTGTCACAACAATGTCAAGGAAAAGAGGTTTTGGAAGATATTTTGGTCCAGCTTACTCGCGACACCAAAGATAAAACTAAAGAAATGAATAAGAATCAAATGGTAGAGAAGCTTTGTAGCATCCAAAAAGAAAAGAAATGTTTGGTGGTTCTTGATGACGTTTGGACTCGTGATGCGTGGAACTCTTTGAAAAATGGATTTCCAATCGGTGCGGAAACAAAGAGTCGTATATTACTCACCACTCGGAAGAAGGACGTTGCTGAAATTGCTGGAGAAAATGGTTTCGTTCATGTATCTCATGCGCTAGATGATGAGGGATGCTTGGAACTGTTTAAGAAGATAGCAATCTTTGGGAGAGATCAAACAAACTCTAAAATTGATGCTGAGAAGGAAGAACTAGGAAAGAAGATGCTCAAACATTGTGCACGTCTGCCATTAGCCATTACTGTGCTTGCGGGACTTCTAGCTAGAAAGGTCACAATTGATGAGTGGAATGCAGTATACGAGAACGTTGATGTGTATATACGGAGAGGAACTAATCTTGACACAGAGTACAAAGGCGATCAAGAATATGCTGGTGCATTAAGGGTGTTGGCATTGAGTTATGACGACTTACCATATTGTCTAAAACTATGTTTTCTATACTTAGGTCACTTTCCGGAGGATTATGAGATACCGGTCAAAAGATTGGCTCAGTTATGGATAGCAGAAGGTTTTATATCTTCGGGTTCCCAACGACATGGTTCAGCGGAGGTATTGGAAGATGTAGCATATGCTTGCTTAATTGAGTTGGTGGAAAGATGTATGGTTCAAGTTGGAATACTTGGTTCAACTAAGAGGATCAAAACATGTCATCTTCATGATCTTATGCGAGACTTGTGCTTGGTAAAGGCAGAAGAGGAGAACTTTCTTCACGTTGTAAATTTTACCAGTACGATAACCAAGACAGCGACAATTCCTAAAGGTCGAAGACTTGGTGTACATGTGGAAACAGAATTTGTTGATAAATTTGCTCCCACAAGAAATGACCACCTTAGGTCTTTGTTATTCTTTGTCGACCCAGAATATAGATTCTCCAACTGGAAGAAAAAATTCTTGCGGTCAGTAGTATGCAACTTCAAATTGCTCAGGGTTCTAAAGCTTGAAGGCATACTGAGTTATGTAGAGTTGCCGAGTAATATTGGGAATCTAGTCCACTTAAGGTTTTTAAGTCTAAGGGAAAGTCATGTAAGACGGTTGCCATCATCTTTAGGTAATTTGGTATGTTTGCAAACTCTAGACTTACGCTTGTATGTTGGGTGGGGGGTGAAAGTACCAAATGTGATTTGGAAGATGAAAGAATTGAGACATTTATATTTACCCGTTTCGGGGTACAGAGGGAAGTTGAAGTTGGCTACTCTTGGGAATTTGCAGAGTTTAGTCAATGTTGCAGGTGCTGATTGTGATTTGACTCATCTTGCTGAATTGACCAATCTCAGAAAAATGTTCATACAAGGTGAGGTGAAAAATATGGAGGAAATGTTGAAATCTACTGGCATCACATTTAACCATCTTCGATCTCTATCTCTTTTCGTGGGGTCTGAAGTTATACCAATGAAAATGGTATTGAGTTGTCCTCATATATACAAACTTGAGTTGGAAGGGAGAATGAGAGATGAATCATTGGAAGGTCTCCAGTACTATCAGAACCTCACTAAGATGTCGATGAGTTGGACTAAACTACAGTTGGAGAGTCTCAAAATACTTGAGAAGATCCCAAACTTAAGAATGCTTTGGCTTAATGCTGGTAGTTTGGACAAGAATGTTTCATCAGAAGTAGTTGTCTCAGAAGAAGGTTATCCTAATCTTGAATTTCTTTCACTTGGTGGGATGGAAGAATTAAAGAGTTGGAGCATAGAGAAAGGAGGCATGCCTAATCTCTGCAGATTGTCTATTATAGAATGCTTGGAATTGAGGGCAGTTCCTGAGGGGCTTCAGCATGTTAGTACCCTCAAGGAACTAACAATCATAGGCATGCGACGGGAATTCTGTAGTAGGGCTGGGGAAGGAGAGGATTTCTACAAAATTAAACATGTGCCTTCTGTTACAATAATAGGTGGCGGATGCTGCTGCTGGGAAGGGGAAGGCAAGGCCAATCTCGCAAAATCAGATCGTGGTAAGGCAAGGATCAAGAAAGGGAAGCAGTGTCCCAACTCGGAAGCTGTAAAAGCCTTGGTGATTAGCAGTTGCATTACATTACACAACTTGTTTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

976

Amino Acids

110.5

Weight (kDa)

8.42

Isoelectric Point (pI)

42.01

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 86	9.6e-20	Rx N-terminal domain
NB-ARC	PF00931	169 - 340	1.7e-42	NB-ARC domain
AAA_22	PF13401	185 - 277	8.2e-06	AAA domain
WHD_DRP	PF23559	443 - 518	9.2e-17	Disease resistance protein Winged helix domain
LRR_14	PF23598	594 - 894	1.8e-33	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	191
AarI	CACCTGC	1 cut(s)	2093
Acc36I	ACCTGC	1 cut(s)	2093
AccB1I	GGYRCC	1 cut(s)	428
AccBSI	CCGCTC	1 cut(s)	75
AccI	GTMKAC	2 cut(s)	1173, 1728
AccII	CGCG	1 cut(s)	732
AccIII	TCCGGA	1 cut(s)	1330
AciI	CCGC	9 cut(s)	11, 45, 75, 585, 884, 1127, 1421, 1771, 2772
AclI	AACGTT	1 cut(s)	1182
AclWI	GGATC	3 cut(s)	1520, 2419, 2846
AcsI	RAATTY	7 cut(s)	1594, 1667, 1679, 1763, 2077, 2522, 2696
AcuI	CTGAAG	2 cut(s)	2274, 2630
AdeI	CACNNNGTG	1 cut(s)	2537
AfaI	GTAC	8 cut(s)	171, 1226, 1606, 1653, 1986, 2045, 2351, 2659
AfiI	CCNNNNNNNGG	3 cut(s)	372, 2039, 2040
AflII	CTTAAG	2 cut(s)	1870, 2434
AflIII	ACRYGT	3 cut(s)	1520, 1654, 2743
AgeI	ACCGGT	1 cut(s)	1348
AhlI	ACTAGT	1 cut(s)	523
AjiI	CACGTC	1 cut(s)	1100
AjuI	GAANNNNNNNTTGG	2 cut(s)	2045, 2077
AloI	GAACNNNNNNTCC	4 cut(s)	50, 82, 571, 603
AluBI	AGCT	7 cut(s)	112, 274, 724, 784, 1139, 1813, 2873
AluI	AGCT	7 cut(s)	112, 274, 724, 784, 1139, 1813, 2873
Alw21I	GWGCWC	1 cut(s)	1099
Alw26I	GTCTC	6 cut(s)	53, 1539, 2011, 2348, 2411, 2500
Alw44I	GTGCAC	1 cut(s)	1095
AlwI	GGATC	3 cut(s)	1520, 2419, 2846
AlwNI	CAGNNNCTG	2 cut(s)	2108, 2636
Aor13HI	TCCGGA	1 cut(s)	1330
AoxI	GGCC	2 cut(s)	553, 2802
ApaLI	GTGCAC	1 cut(s)	1095
ApeKI	GCWGC	3 cut(s)	200, 2778, 2781
ApoI	RAATTY	7 cut(s)	1594, 1667, 1679, 1763, 2077, 2522, 2696
AsiGI	ACCGGT	1 cut(s)	1348
Asp700I	GAANNNNTTC	1 cut(s)	1763
AspLEI	GCGC	1 cut(s)	976
AspS9I	GGNCC	2 cut(s)	554, 718
AsuHPI	GGTGA	7 cut(s)	73, 550, 901, 1990, 2180, 2185, 2899
AvaII	GGWCC	1 cut(s)	718
AxyI	CCTNAGG	2 cut(s)	1706, 2637
BaeGI	GKGCMC	2 cut(s)	416, 1099
BanI	GGYRCC	1 cut(s)	428
BanII	GRGCYC	1 cut(s)	39
BauI	CACGAG	1 cut(s)	840
BbsI	GAAGAC	2 cut(s)	165, 1648
Bbv12I	GWGCWC	1 cut(s)	1099
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	3 cut(s)	187, 2765, 2768
BccI	CCATC	4 cut(s)	574, 1921, 2229, 2536
BcgI	CGANNNNNNTGC	4 cut(s)	641, 675, 1533, 1567
BcoDI	GTCTC	6 cut(s)	53, 1539, 2011, 2348, 2411, 2500
BcuI	ACTAGT	1 cut(s)	523
BfaI	CTAG	7 cut(s)	524, 977, 1070, 1136, 1140, 1862, 1949
BfmI	CTRYAG	3 cut(s)	2393, 2593, 2701
BfrI	CTTAAG	2 cut(s)	1870, 2434
BfuAI	ACCTGC	1 cut(s)	2093
BisI	GCNGC	3 cut(s)	201, 2779, 2782
BlsI	GCNGC	3 cut(s)	202, 2780, 2783
BmcAI	AGTACT	1 cut(s)	2351
Bme18I	GGWCC	1 cut(s)	718
BmgBI	CACGTC	1 cut(s)	1100
BmgT120I	GGNCC	2 cut(s)	554, 718
BmiI	GGNNCC	3 cut(s)	430, 556, 1402
BpiI	GAAGAC	2 cut(s)	165, 1648
BplI	GAGNNNNNCTC	2 cut(s)	2272, 2304
BpmI	CTGGAG	2 cut(s)	963, 2330
Bpu10I	CCTNAGC	2 cut(s)	6, 1799
BpuEI	CTTGAG	4 cut(s)	91, 2324, 2438, 2648
BsaBI	GATNNNNATC	2 cut(s)	1016, 2233
BsaI	GGTCTC	2 cut(s)	53, 2348
BsaJI	CCNNGG	1 cut(s)	2883
BsaWI	WCCGGW	2 cut(s)	1330, 1348
BsaXI	ACNNNNNCTCC	6 cut(s)	50, 80, 252, 282, 2177, 2207
Bsc4I	CCNNNNNNNGG	3 cut(s)	372, 2039, 2040
Bse118I	RCCGGY	1 cut(s)	1348
Bse1I	ACTGG	4 cut(s)	1602, 1757, 2209, 2347
Bse21I	CCTNAGG	2 cut(s)	1706, 2637
Bse8I	GATNNNNATC	2 cut(s)	1016, 2233
BseAI	TCCGGA	1 cut(s)	1330
BseDI	CCNNGG	1 cut(s)	2883
BseGI	GGATG	6 cut(s)	223, 585, 792, 995, 2547, 2780
BseJI	GATNNNNATC	2 cut(s)	1016, 2233
BseLI	CCNNNNNNNGG	3 cut(s)	372, 2039, 2040
BseMII	CTCAG	8 cut(s)	265, 1047, 1379, 1813, 1817, 2161, 2511, 2628
BseNI	ACTGG	4 cut(s)	1602, 1757, 2209, 2347
BseRI	GAGGAG	2 cut(s)	71, 1586
BseSI	GKGCMC	2 cut(s)	416, 1099
BseXI	GCAGC	3 cut(s)	187, 2765, 2768
BseYI	CCCAGC	2 cut(s)	2711, 2784
Bsh1236I	CGCG	1 cut(s)	732
BshFI	GGCC	2 cut(s)	555, 2804
BshNI	GGYRCC	1 cut(s)	428
BshTI	ACCGGT	1 cut(s)	1348
BsiHKAI	GWGCWC	1 cut(s)	1099
BsiSI	CCGG	2 cut(s)	1331, 1349
BslFI	GGGAC	2 cut(s)	1143, 2844
BslI	CCNNNNNNNGG	3 cut(s)	372, 2039, 2040
BsmAI	GTCTC	6 cut(s)	53, 1539, 2011, 2348, 2411, 2500
BsmFI	GGGAC	2 cut(s)	1143, 2844
BsmI	GAATGC	3 cut(s)	1171, 2445, 2618
BsnI	GGCC	2 cut(s)	555, 2804
Bso31I	GGTCTC	2 cut(s)	53, 2348
Bsp1286I	GDGCHC	3 cut(s)	39, 416, 1099
Bsp13I	TCCGGA	1 cut(s)	1330
Bsp1407I	TGTACA	1 cut(s)	1651
Bsp143I	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
Bsp68I	TCGCGA	1 cut(s)	732
BspACI	CCGC	9 cut(s)	11, 45, 75, 585, 884, 1127, 1421, 1771, 2772
BspANI	GGCC	2 cut(s)	555, 2804
BspCNI	CTCAG	8 cut(s)	264, 1048, 1378, 1812, 1818, 2160, 2510, 2629
BspEI	TCCGGA	1 cut(s)	1330
BspFNI	CGCG	1 cut(s)	732
BspHI	TCATGA	1 cut(s)	1531
BspLI	GGNNCC	3 cut(s)	430, 556, 1402
BspMAI	CTGCAG	1 cut(s)	2597
BspMI	ACCTGC	1 cut(s)	2093
BspPI	GGATC	3 cut(s)	1520, 2419, 2846
BspT107I	GGYRCC	1 cut(s)	428
BspTI	CTTAAG	2 cut(s)	1870, 2434
BspTNI	GGTCTC	2 cut(s)	53, 2348
BsrBI	CCGCTC	1 cut(s)	75
BsrFI	RCCGGY	1 cut(s)	1348
BsrGI	TGTACA	1 cut(s)	1651
BsrI	ACTGG	4 cut(s)	1602, 1757, 2209, 2347
BssAI	RCCGGY	1 cut(s)	1348
BssECI	CCNNGG	1 cut(s)	2883
BssMI	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
BssNAI	GTATAC	1 cut(s)	1174
BssSI	CACGAG	1 cut(s)	840
BssT1I	CCWWGG	1 cut(s)	2883
Bst1107I	GTATAC	1 cut(s)	1174
Bst2BI	CACGAG	1 cut(s)	840
Bst4CI	ACNGT	4 cut(s)	1002, 1120, 1908, 2397
Bst6I	CTCTTC	1 cut(s)	1563
BstAFI	CTTAAG	2 cut(s)	1870, 2434
BstAUI	TGTACA	1 cut(s)	1651
BstC8I	GCNNGC	6 cut(s)	99, 295, 1125, 1450, 2582, 2687
BstF5I	GGATG	6 cut(s)	223, 585, 792, 995, 2547, 2780
BstFNI	CGCG	1 cut(s)	732
BstHHI	GCGC	1 cut(s)	976
BstKTI	GATC	9 cut(s)	88, 1033, 1237, 1515, 1537, 2231, 2427, 2824, 2841
BstMAI	GTCTC	6 cut(s)	53, 1539, 2011, 2348, 2411, 2500
BstMBI	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
BstMWI	GCNNNNNNNGC	5 cut(s)	81, 938, 2778, 2810, 2879
BstNSI	RCATGY	7 cut(s)	101, 1524, 1658, 2584, 2654, 2689, 2747
BstSFI	CTRYAG	3 cut(s)	2393, 2593, 2701
BstSLI	GKGCMC	2 cut(s)	416, 1099
BstUI	CGCG	1 cut(s)	732
BstV1I	GCAGC	3 cut(s)	187, 2765, 2768
BstV2I	GAAGAC	2 cut(s)	165, 1648
BstX2I	RGATCY	1 cut(s)	2424
BstXI	CCANNNNNNTGG	1 cut(s)	1412
BstYI	RGATCY	1 cut(s)	2424
BstZ17I	GTATAC	1 cut(s)	1174
Bsu36I	CCTNAGG	2 cut(s)	1706, 2637
BsuRI	GGCC	2 cut(s)	555, 2804
BtrI	CACGTC	1 cut(s)	1100
BtsCI	GGATG	6 cut(s)	223, 585, 792, 995, 2547, 2780
BtsI	GCAGTG	1 cut(s)	2861
BtsIMutI	CAGTG	1 cut(s)	2861
BtuMI	TCGCGA	1 cut(s)	732
BveI	ACCTGC	1 cut(s)	2093
Cac8I	GCNNGC	6 cut(s)	99, 295, 1125, 1450, 2582, 2687
CaiI	CAGNNNCTG	2 cut(s)	2108, 2636
CciI	TCATGA	1 cut(s)	1531
CfoI	GCGC	1 cut(s)	976
Cfr10I	RCCGGY	1 cut(s)	1348
Cfr13I	GGNCC	2 cut(s)	554, 718
CseI	GACGC	1 cut(s)	632
Csp6I	GTAC	8 cut(s)	170, 1225, 1605, 1652, 1985, 2044, 2350, 2658
CspAI	ACCGGT	1 cut(s)	1348
CspCI	CAANNNNNGTGG	2 cut(s)	421, 456
CviQI	GTAC	8 cut(s)	170, 1225, 1605, 1652, 1985, 2044, 2350, 2658
DpnI	GATC	9 cut(s)	87, 1032, 1236, 1514, 1536, 2230, 2426, 2823, 2840
DpnII	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
DraIII	CACNNNGTG	1 cut(s)	2537
Eam1104I	CTCTTC	1 cut(s)	1563
EarI	CTCTTC	1 cut(s)	1563
EciI	GGCGGA	1 cut(s)	2787
Eco130I	CCWWGG	1 cut(s)	2883
Eco24I	GRGCYC	1 cut(s)	39
Eco31I	GGTCTC	2 cut(s)	53, 2348
Eco47I	GGWCC	1 cut(s)	718
Eco57I	CTGAAG	2 cut(s)	2274, 2630
Eco81I	CCTNAGG	2 cut(s)	1706, 2637
EcoO109I	RGGNCCY	1 cut(s)	554
EcoRI	GAATTC	1 cut(s)	2696
EcoT14I	CCWWGG	1 cut(s)	2883
EcoT38I	GRGCYC	1 cut(s)	39
ErhI	CCWWGG	1 cut(s)	2883
FalI	AAGNNNNNCTT	6 cut(s)	277, 309, 451, 483, 632, 664
FaqI	GGGAC	2 cut(s)	1143, 2844
FauI	CCCGC	1 cut(s)	1120
FauNDI	CATATG	1 cut(s)	1444
FblI	GTMKAC	2 cut(s)	1173, 1728
Fnu4HI	GCNGC	3 cut(s)	201, 2779, 2782
FokI	GGATG	6 cut(s)	230, 592, 779, 1002, 2554, 2787
FriOI	GRGCYC	1 cut(s)	39
Fsp4HI	GCNGC	3 cut(s)	201, 2779, 2782
FspBI	CTAG	7 cut(s)	524, 977, 1070, 1136, 1140, 1862, 1949
GlaI	GCGC	1 cut(s)	975
GluI	GCNGC	3 cut(s)	201, 2779, 2782
GsaI	CCCAGC	2 cut(s)	2715, 2788
GsuI	CTGGAG	2 cut(s)	963, 2330
HaeIII	GGCC	2 cut(s)	555, 2804
HapII	CCGG	2 cut(s)	1331, 1349
HgaI	GACGC	1 cut(s)	632
HhaI	GCGC	1 cut(s)	976
Hin6I	GCGC	1 cut(s)	974
HinP1I	GCGC	1 cut(s)	974
HincII	GTYRAC	1 cut(s)	1729
HindII	GTYRAC	1 cut(s)	1729
HindIII	AAGCTT	3 cut(s)	272, 782, 1811
HinfI	GANTC	9 cut(s)	227, 766, 838, 895, 1743, 1858, 2122, 2330, 2404
HpaII	CCGG	2 cut(s)	1331, 1349
HphI	GGTGA	7 cut(s)	73, 550, 901, 1990, 2180, 2185, 2899
Hpy166II	GTNNAC	5 cut(s)	1097, 1174, 1652, 1729, 1867
Hpy8I	GTNNAC	5 cut(s)	1097, 1174, 1652, 1729, 1867
Hpy99I	CGWCG	1 cut(s)	2694
HpyCH4III	ACNGT	4 cut(s)	1002, 1120, 1908, 2397
HpyCH4IV	ACGT	6 cut(s)	487, 831, 927, 1099, 1182, 1587
HpyF10VI	GCNNNNNNNGC	5 cut(s)	81, 938, 2778, 2810, 2879
HpySE526I	ACGT	6 cut(s)	487, 831, 927, 1099, 1182, 1587
HspAI	GCGC	1 cut(s)	974
Kpn2I	TCCGGA	1 cut(s)	1330
Kzo9I	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
LmnI	GCTCC	2 cut(s)	1690, 2562
Lsp1109I	GCAGC	3 cut(s)	187, 2765, 2768
MaeI	CTAG	7 cut(s)	524, 977, 1070, 1136, 1140, 1862, 1949
MaeII	ACGT	6 cut(s)	487, 831, 927, 1099, 1182, 1587
MaeIII	GTNAC	8 cut(s)	320, 526, 623, 644, 675, 1147, 1322, 2755
MalI	GATC	9 cut(s)	87, 1032, 1236, 1514, 1536, 2230, 2426, 2823, 2840
MbiI	CCGCTC	1 cut(s)	75
MboI	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
MfeI	CAATTG	2 cut(s)	533, 1152
MflI	RGATCY	1 cut(s)	2424
MhlI	GDGCHC	3 cut(s)	39, 416, 1099
MlyI	GAGTC	4 cut(s)	832, 904, 2116, 2413
MmeI	TCCRAC	6 cut(s)	1468, 1773, 2289, 2363, 2379, 2540
MroI	TCCGGA	1 cut(s)	1330
MroXI	GAANNNNTTC	1 cut(s)	1763
MslI	CAYNNNNRTG	5 cut(s)	682, 1118, 1530, 2369, 2684
MspA1I	CMGCKG	1 cut(s)	1421
MspCI	CTTAAG	2 cut(s)	1870, 2434
MspI	CCGG	2 cut(s)	1331, 1349
MunI	CAATTG	2 cut(s)	533, 1152
Mva1269I	GAATGC	3 cut(s)	1171, 2445, 2618
MvnI	CGCG	1 cut(s)	732
MwoI	GCNNNNNNNGC	5 cut(s)	81, 938, 2778, 2810, 2879
NdeI	CATATG	1 cut(s)	1444
NdeII	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
NlaIV	GGNNCC	3 cut(s)	430, 556, 1402
NmeAIII	GCCGAG	1 cut(s)	1869
NmuCI	GTSAC	7 cut(s)	320, 526, 623, 644, 675, 1147, 1322
NruI	TCGCGA	1 cut(s)	732
NspI	RCATGY	7 cut(s)	101, 1524, 1658, 2584, 2654, 2689, 2747
PaeI	GCATGC	3 cut(s)	101, 2584, 2689
PagI	TCATGA	1 cut(s)	1531
PaqCI	CACCTGC	1 cut(s)	2093
PciI	ACATGT	3 cut(s)	1520, 1654, 2743
PctI	GAATGC	3 cut(s)	1171, 2445, 2618
PdmI	GAANNNNTTC	1 cut(s)	1763
PfeI	GAWTC	5 cut(s)	227, 766, 1743, 1858, 2330
PinAI	ACCGGT	1 cut(s)	1348
PkrI	GCNGC	3 cut(s)	202, 2780, 2783
PleI	GAGTC	4 cut(s)	832, 903, 2116, 2412
PpsI	GAGTC	4 cut(s)	832, 903, 2116, 2412
PscI	ACATGT	3 cut(s)	1520, 1654, 2743
PsiI	TTATAA	1 cut(s)	191
Psp1406I	AACGTT	1 cut(s)	1182
PspFI	CCCAGC	2 cut(s)	2711, 2784
PspN4I	GGNNCC	3 cut(s)	430, 556, 1402
PspPI	GGNCC	2 cut(s)	554, 718
PstI	CTGCAG	1 cut(s)	2597
PstNI	CAGNNNCTG	2 cut(s)	2108, 2636
PsuI	RGATCY	1 cut(s)	2424
RruI	TCGCGA	1 cut(s)	732
RsaI	GTAC	8 cut(s)	171, 1226, 1606, 1653, 1986, 2045, 2351, 2659
RsaNI	GTAC	8 cut(s)	170, 1225, 1605, 1652, 1985, 2044, 2350, 2658
RseI	CAYNNNNRTG	5 cut(s)	682, 1118, 1530, 2369, 2684
SalI	GTCGAC	1 cut(s)	1727
SatI	GCNGC	3 cut(s)	201, 2779, 2782
Sau3AI	GATC	9 cut(s)	85, 1030, 1234, 1512, 1534, 2228, 2424, 2821, 2838
Sau96I	GGNCC	2 cut(s)	554, 718
ScaI	AGTACT	1 cut(s)	2351
SchI	GAGTC	4 cut(s)	832, 904, 2116, 2413
SduI	GDGCHC	3 cut(s)	39, 416, 1099
SfcI	CTRYAG	3 cut(s)	2393, 2593, 2701
SinI	GGWCC	1 cut(s)	718
SmiMI	CAYNNNNRTG	5 cut(s)	682, 1118, 1530, 2369, 2684
SmlI	CTYRAG	6 cut(s)	70, 1870, 2303, 2417, 2434, 2663
SmoI	CTYRAG	6 cut(s)	70, 1870, 2303, 2417, 2434, 2663
SpeI	ACTAGT	1 cut(s)	523
SphI	GCATGC	3 cut(s)	101, 2584, 2689
SsiI	CCGC	9 cut(s)	11, 45, 75, 585, 884, 1127, 1421, 1771, 2772
SspI	AATATT	1 cut(s)	1852
SspMI	CTAG	7 cut(s)	524, 977, 1070, 1136, 1140, 1862, 1949
StyI	CCWWGG	1 cut(s)	2883
TaaI	ACNGT	4 cut(s)	1002, 1120, 1908, 2397
TaiI	ACGT	6 cut(s)	490, 834, 930, 1102, 1185, 1590
TaqI	TCGA	5 cut(s)	651, 1639, 1728, 2227, 2375
TatI	WGTACW	3 cut(s)	1224, 1651, 2349
TfiI	GAWTC	5 cut(s)	227, 766, 1743, 1858, 2330
TscAI	CASTG	1 cut(s)	2861
TseFI	GTSAC	7 cut(s)	320, 526, 623, 644, 675, 1147, 1322
TseI	GCWGC	3 cut(s)	200, 2778, 2781
Tsp45I	GTSAC	7 cut(s)	320, 526, 623, 644, 675, 1147, 1322
TspGWI	ACGGA	1 cut(s)	1213
TspRI	CASTG	1 cut(s)	2861
Vha464I	CTTAAG	2 cut(s)	1870, 2434
VneI	GTGCAC	1 cut(s)	1095
VpaK11BI	GGWCC	1 cut(s)	718
XapI	RAATTY	7 cut(s)	1594, 1667, 1679, 1763, 2077, 2522, 2696
XbaI	TCTAGA	1 cut(s)	1948
XceI	RCATGY	7 cut(s)	101, 1524, 1658, 2584, 2654, 2689, 2747
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1995
XmiI	GTMKAC	2 cut(s)	1173, 1728
XmnI	GAANNNNTTC	1 cut(s)	1763
XspI	CTAG	7 cut(s)	524, 977, 1070, 1136, 1140, 1862, 1949
ZrmI	AGTACT	1 cut(s)	2351

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.