Rroxscaffold_5G00362240

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
43129148 .. 43135025
5878 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00362240.1

Sequence Viewer

Length: 1938 bp
ATGGCTGAGGCTGTTGTTTCTTTTCTCGTGGAAAGAGTTGGTGACTTCATCATTCAAGAAGGCAGATCCTTGTCCGGAGTTGGCGATCAAGTTAGGCGAGCACACAGAGACCTACTATTCATCAGGGGCTTCCTTAAAGATGCAGACGCAAAGCGACGAGATAGTGAGGCAATACGCATTTTTGTTGCCGAAATTAGAGATGCTGCTTATGATTTGGAGGATGTCATTGAAGCTTTTGTCTTGAAGGTGGATTCCAAGAGAAAAGGAGGTATAAAGAATGTTTTGAAGAGGTTGGGGTGCATCTTCATTGAAGGAGTTCGTCGTCACAAGATTGGGTCAGAAATTGGGGTAATTACTATCACGATTTCTGATTTGAAGCAGAACTTGCAAACTTATGGTATCAAGGAGATAAGGGATTCCTCTACTTCCCTCCAATTGTGTGAAGGACAACAACTACTGAGGCGAACTTACACTCATGTTATTGATCGTAATGTGGTCGGGCTAGAGGATTCTGTCCATGAATTGGTTGGGCATTTGGTGAAGGAAGAGCATCGCCACCGTGTTGTTTCTATTATTGGGATGGGCGGATGTGGGAAAACAACTATTGCTAAACAAGTTTATCATCACAAAGAGGTAACAGACCACTTTGATTGTTTGGCTTGGGTTTGTATATCACAACAATATCAAGTCAGGGATGTCTTGGAGAGGATTTATGTCAAACTTCTTTGCCCCACAAAAGAGGAGAGGGATGAAATAGCAAAATTGAAGGATGACGAAATACCAGGGAGGCTTTCTCGTCTCCAAAATGAAAAAAAATGTTTGATTGTCCTTGATGACATTTGGAAAAGAGAGACCTGGGACTTTTTGAGGGCTGCATTTGAATGCGATGAAGACTCAAAGAGCAGGATACTACTTACGACACGCAATGAACAAGTAGCTTCGCATGCCGATGATAACGGTTTTCGCTACCGACCTCCACCACTAAATGAGTCTGAGAGTTGGAATCTGTTTGAGAAAGTTGCAATGAGTGGAAGGAAAGCTGGAATAGATGCTGAAGTTTACACGAAGATGGAAGAATTAGGAAAAGAGATGGTTCAACATTGTAGGGGTCTGCCGCTAGCTGTCATTGTACTTGCTGGACTTCTTGCCAGGAAAAACACAATTAAAGATTGGTTAACCATACAAGAAAATGTTGGTGTGTACATAAGTAGAGGCTTTGGCCACCAGGAAGAAGAACATGCATATGCATCGTGGGTGTTGGCATTGAGTTATGATGACTTGCCGTATCACTTAAAACCTTGTTTCCTATATTTAGGACATTTTCCCGAGGATCATGAGATCCGGATGAAGAGTTTGACAAAACTATGGATTGCAGAAGGTTTTATTTCTTTGACAAAACAAAGACAAAGTTCAGGGGAAACAATGGAGGATGTGGCATACAATTGGTTGAATGAGTTGGCAGAAAGGTGTGTGATTCAAGCAGGAGAAAGAAGTTCAACTTTTAAGAATATTAAAACTTGTCGGATGCATGATCTTTTGCGAGATTTGTGTTTGAGGAAGGCGGAAGAGGAAAATTTTCTCCAAGTTGTGAAAGGTTCTCATAAAAATGAGGCAACGCATCCAGTTTCTTCTTCTTCCTCCATGGTAACATATGTATCACCAATGGGTAAGATTCGAAGACTTGCCGTCTACTTGGATGAGAATGATGATAAATTGGTACCCTCACTTGGGGAAAAAGGTGGACACCTTAGGTCCTTGTTATATTTTGGCCCCAACGATAATTATTGGTTTCCTAAAAGGAAAGAATTAATACCTTCCATGTTCAAGGATGTCAAATTACTCAGAGTGTTGATGATTGAAGGTATGGATAATGACGACGAAGAAATAAAGTTGCCTAGAGAAATTGGAAACATGGTCCACTTGAGGTTTCGAGTCTAA

Protein Analysis

645

Amino Acids

74.14

Weight (kDa)

6.64

Isoelectric Point (pI)

46.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 88 1.3e-20 Rx N-terminal domain
NB-ARC PF00931 169 - 344 2.5e-43 NB-ARC domain
WHD_DRP PF23559 441 - 517 6.4e-20 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1717
AccB1I GGYRCC 1 cut(s) 1717
AccB7I CCANNNNNTGG 1 cut(s) 523
AccI GTMKAC 1 cut(s) 1689
AccIII TCCGGA 2 cut(s) 74, 1341
AciI CCGC 3 cut(s) 585, 1115, 1562
AclWI GGATC 3 cut(s) 60, 1333, 1338
AcoI YGGCCR 1 cut(s) 1219
AcsI RAATTY 1 cut(s) 1573
AcuI CTGAAG 1 cut(s) 1074
AfaI GTAC 3 cut(s) 1131, 1202, 1719
AfiI CCNNNNNNNGG 3 cut(s) 523, 1727, 1728
AhdI GACNNNNNGTC 1 cut(s) 1685
AjnI CCWGG 4 cut(s) 781, 854, 1148, 1224
AluBI AGCT 4 cut(s) 233, 938, 1040, 1121
AluI AGCT 4 cut(s) 233, 938, 1040, 1121
Alw21I GWGCWC 1 cut(s) 103
Alw26I GTCTC 3 cut(s) 102, 803, 845
AlwI GGATC 3 cut(s) 60, 1333, 1338
Ama87I CYCGRG 1 cut(s) 1325
Aor13HI TCCGGA 2 cut(s) 74, 1341
AoxI GGCC 2 cut(s) 1219, 1768
ApeKI GCWGC 2 cut(s) 203, 872
ApoI RAATTY 1 cut(s) 1573
AseI ATTAAT 1 cut(s) 1808
Asp700I GAANNNNTTC 2 cut(s) 315, 1575
Asp718I GGTACC 1 cut(s) 1717
AspS9I GGNCC 3 cut(s) 1752, 1769, 1915
AsuHPI GGTGA 3 cut(s) 53, 550, 1650
AsuII TTCGAA 1 cut(s) 1675
AsuNHI GCTAGC 1 cut(s) 1117
AvaI CYCGRG 1 cut(s) 1325
AvaII GGWCC 2 cut(s) 1752, 1915
AxyI CCTNAGG 1 cut(s) 1748
BaeI ACNNNNGTAYC 2 cut(s) 1638, 1671
BalI TGGCCA 1 cut(s) 1221
BanI GGYRCC 1 cut(s) 1717
BauI CACGAG 1 cut(s) 26
BbsI GAAGAC 2 cut(s) 897, 1684
Bbv12I GWGCWC 1 cut(s) 103
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 2 cut(s) 190, 859
BccI CCATC 3 cut(s) 574, 1063, 1084
BceAI ACGGC 2 cut(s) 1267, 1670
BcgI CGANNNNNNTGC 2 cut(s) 1230, 1264
BciT130I CCWGG 4 cut(s) 783, 856, 1150, 1226
BciVI GTATCC 1 cut(s) 900
BcoDI GTCTC 3 cut(s) 102, 803, 845
BfaI CTAG 3 cut(s) 503, 1118, 1896
BfuI GTATCC 1 cut(s) 900
BisI GCNGC 3 cut(s) 204, 873, 1115
BlsI GCNGC 3 cut(s) 205, 874, 1116
Bme1390I CCNGG 4 cut(s) 783, 856, 1150, 1226
Bme18I GGWCC 2 cut(s) 1752, 1915
BmeRI GACNNNNNGTC 1 cut(s) 1685
BmeT110I CYCGRG 1 cut(s) 1325
BmgT120I GGNCC 3 cut(s) 1752, 1769, 1915
BmiI GGNNCC 2 cut(s) 1719, 1771
BmrFI CCNGG 4 cut(s) 783, 856, 1150, 1226
BmsI GCATC 8 cut(s) 130, 190, 309, 559, 1039, 1256, 1515, 1627
BmtI GCTAGC 1 cut(s) 1121
BpiI GAAGAC 2 cut(s) 897, 1684
BplI GAGNNNNNCTC 2 cut(s) 778, 810
Bpu10I CCTNAGC 1 cut(s) 6
Bpu14I TTCGAA 1 cut(s) 1675
BsaI GGTCTC 2 cut(s) 102, 845
BsaJI CCNNGG 4 cut(s) 782, 855, 1326, 1641
BsaWI WCCGGW 2 cut(s) 74, 1341
Bsc4I CCNNNNNNNGG 3 cut(s) 523, 1727, 1728
Bse1I ACTGG 1 cut(s) 1622
Bse21I CCTNAGG 1 cut(s) 1748
Bse3DI GCAATG 2 cut(s) 931, 1029
BseAI TCCGGA 2 cut(s) 74, 1341
BseBI CCWGG 4 cut(s) 783, 856, 1150, 1226
BseDI CCNNGG 4 cut(s) 782, 855, 1326, 1641
BseLI CCNNNNNNNGG 3 cut(s) 523, 1727, 1728
BseMI GCAATG 2 cut(s) 931, 1029
BseMII CTCAG 3 cut(s) 449, 984, 1855
BseNI ACTGG 1 cut(s) 1622
BseRI GAGGAG 1 cut(s) 755
BseXI GCAGC 2 cut(s) 190, 859
BshFI GGCC 2 cut(s) 1221, 1770
BshNI GGYRCC 1 cut(s) 1717
BsiHKAI GWGCWC 1 cut(s) 103
BsiHKCI CYCGRG 1 cut(s) 1325
BsiSI CCGG 2 cut(s) 75, 1342
BslFI GGGAC 1 cut(s) 872
BslI CCNNNNNNNGG 3 cut(s) 523, 1727, 1728
BsmAI GTCTC 3 cut(s) 102, 803, 845
BsmBI CGTCTC 1 cut(s) 803
BsmFI GGGAC 1 cut(s) 872
BsmI GAATGC 1 cut(s) 887
BsnI GGCC 2 cut(s) 1221, 1770
Bso31I GGTCTC 2 cut(s) 102, 845
BsoBI CYCGRG 1 cut(s) 1325
Bsp119I TTCGAA 1 cut(s) 1675
Bsp1286I GDGCHC 1 cut(s) 103
Bsp13I TCCGGA 2 cut(s) 74, 1341
Bsp1407I TGTACA 1 cut(s) 1200
Bsp143I GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
Bsp19I CCATGG 1 cut(s) 1641
BspACI CCGC 3 cut(s) 585, 1115, 1562
BspANI GGCC 2 cut(s) 1221, 1770
BspCNI CTCAG 3 cut(s) 450, 985, 1854
BspEI TCCGGA 2 cut(s) 74, 1341
BspHI TCATGA 1 cut(s) 1333
BspLI GGNNCC 2 cut(s) 1719, 1771
BspOI GCTAGC 1 cut(s) 1121
BspPI GGATC 3 cut(s) 60, 1333, 1338
BspQI GCTCTTC 1 cut(s) 540
BspT104I TTCGAA 1 cut(s) 1675
BspT107I GGYRCC 1 cut(s) 1717
BspTNI GGTCTC 2 cut(s) 102, 845
BsrDI GCAATG 2 cut(s) 931, 1029
BsrGI TGTACA 1 cut(s) 1200
BsrI ACTGG 1 cut(s) 1622
BssECI CCNNGG 4 cut(s) 782, 855, 1326, 1641
BssMI GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
BssSI CACGAG 1 cut(s) 26
BssT1I CCWWGG 1 cut(s) 1641
Bst2BI CACGAG 1 cut(s) 26
Bst2UI CCWGG 4 cut(s) 783, 856, 1150, 1226
Bst4CI ACNGT 2 cut(s) 560, 959
Bst6I CTCTTC 4 cut(s) 281, 540, 1343, 1560
BstAPI GCANNNNNTGC 1 cut(s) 385
BstAUI TGTACA 1 cut(s) 1200
BstBI TTCGAA 1 cut(s) 1675
BstC8I GCNNGC 3 cut(s) 99, 945, 1119
BstDEI CTNAG 5 cut(s) 6, 458, 993, 1748, 1841
BstDSI CCRYGG 1 cut(s) 1641
BstKTI GATC 6 cut(s) 68, 88, 487, 1333, 1341, 1534
BstMAI GTCTC 3 cut(s) 102, 803, 845
BstMBI GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
BstMWI GCNNNNNNNGC 2 cut(s) 385, 944
BstNI CCWGG 4 cut(s) 783, 856, 1150, 1226
BstNSI RCATGY 2 cut(s) 947, 1241
BstSCI CCNGG 4 cut(s) 781, 854, 1148, 1224
BstV1I GCAGC 2 cut(s) 190, 859
BstV2I GAAGAC 2 cut(s) 897, 1684
BstX2I RGATCY 2 cut(s) 65, 1338
BstYI RGATCY 2 cut(s) 65, 1338
Bsu36I CCTNAGG 1 cut(s) 1748
BsuI GTATCC 1 cut(s) 900
BsuRI GGCC 2 cut(s) 1221, 1770
BtgI CCRYGG 1 cut(s) 1641
BtgZI GCGATG 2 cut(s) 536, 900
Cac8I GCNNGC 3 cut(s) 99, 945, 1119
CciI TCATGA 1 cut(s) 1333
Cfr13I GGNCC 3 cut(s) 1752, 1769, 1915
CseI GACGC 1 cut(s) 155
Csp6I GTAC 3 cut(s) 1130, 1201, 1718
CspCI CAANNNNNGTGG 2 cut(s) 632, 667
CviAII CATG 9 cut(s) 476, 518, 944, 1238, 1334, 1529, 1642, 1819, 1912
CviQI GTAC 3 cut(s) 1130, 1201, 1718
DdeI CTNAG 5 cut(s) 6, 458, 993, 1748, 1841
DpnI GATC 6 cut(s) 67, 87, 486, 1332, 1340, 1533
DpnII GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
DriI GACNNNNNGTC 1 cut(s) 1685
EaeI YGGCCR 1 cut(s) 1219
Eam1104I CTCTTC 4 cut(s) 281, 540, 1343, 1560
Eam1105I GACNNNNNGTC 1 cut(s) 1685
EarI CTCTTC 4 cut(s) 281, 540, 1343, 1560
EciI GGCGGA 2 cut(s) 600, 1577
Eco130I CCWWGG 1 cut(s) 1641
Eco31I GGTCTC 2 cut(s) 102, 845
Eco47I GGWCC 2 cut(s) 1752, 1915
Eco57I CTGAAG 1 cut(s) 1074
Eco81I CCTNAGG 1 cut(s) 1748
Eco88I CYCGRG 1 cut(s) 1325
EcoO109I RGGNCCY 1 cut(s) 1752
EcoRII CCWGG 4 cut(s) 781, 854, 1148, 1224
EcoT14I CCWWGG 1 cut(s) 1641
EcoT22I ATGCAT 3 cut(s) 1243, 1249, 1530
ErhI CCWWGG 1 cut(s) 1641
Esp3I CGTCTC 1 cut(s) 803
FaeI CATG 9 cut(s) 479, 521, 947, 1241, 1337, 1532, 1645, 1822, 1915
FalI AAGNNNNNCTT 4 cut(s) 368, 400, 1483, 1515
FaqI GGGAC 1 cut(s) 872
FatI CATG 9 cut(s) 475, 517, 943, 1237, 1333, 1528, 1641, 1818, 1911
FauNDI CATATG 2 cut(s) 1243, 1651
FblI GTMKAC 1 cut(s) 1689
Fnu4HI GCNGC 3 cut(s) 204, 873, 1115
Fsp4HI GCNGC 3 cut(s) 204, 873, 1115
FspBI CTAG 3 cut(s) 503, 1118, 1896
GluI GCNGC 3 cut(s) 204, 873, 1115
HaeIII GGCC 2 cut(s) 1221, 1770
HapII CCGG 2 cut(s) 75, 1342
HgaI GACGC 1 cut(s) 155
Hin1II CATG 9 cut(s) 479, 521, 947, 1241, 1337, 1532, 1645, 1822, 1915
HincII GTYRAC 1 cut(s) 1176
HindII GTYRAC 1 cut(s) 1176
HindIII AAGCTT 1 cut(s) 231
HinfI GANTC 9 cut(s) 251, 416, 509, 893, 989, 1003, 1474, 1672, 1932
HpaI GTTAAC 1 cut(s) 1176
HpaII CCGG 2 cut(s) 75, 1342
HphI GGTGA 3 cut(s) 53, 550, 1650
Hpy166II GTNNAC 6 cut(s) 1060, 1176, 1201, 1690, 1742, 1918
Hpy188I TCNGA 5 cut(s) 340, 370, 994, 1524, 1844
Hpy188III TCNNGA 7 cut(s) 56, 75, 241, 361, 1325, 1334, 1342
Hpy8I GTNNAC 6 cut(s) 1060, 1176, 1201, 1690, 1742, 1918
Hpy99I CGWCG 3 cut(s) 159, 324, 1880
HpyCH4III ACNGT 2 cut(s) 560, 959
HpyCH4V TGCA 9 cut(s) 143, 300, 388, 875, 1022, 1241, 1247, 1373, 1528
HpyF10VI GCNNNNNNNGC 2 cut(s) 385, 944
HpyF3I CTNAG 5 cut(s) 6, 458, 993, 1748, 1841
Hsp92II CATG 9 cut(s) 479, 521, 947, 1241, 1337, 1532, 1645, 1822, 1915
Kpn2I TCCGGA 2 cut(s) 74, 1341
KpnI GGTACC 1 cut(s) 1721
KspAI GTTAAC 1 cut(s) 1176
Kzo9I GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
LguI GCTCTTC 1 cut(s) 540
Lsp1109I GCAGC 2 cut(s) 190, 859
LweI GCATC 8 cut(s) 130, 190, 309, 559, 1039, 1256, 1515, 1627
MaeI CTAG 3 cut(s) 503, 1118, 1896
MaeIII GTNAC 4 cut(s) 41, 323, 634, 1645
MalI GATC 6 cut(s) 67, 87, 486, 1332, 1340, 1533
MboI GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
MfeI CAATTG 2 cut(s) 434, 1441
MflI RGATCY 2 cut(s) 65, 1338
MhlI GDGCHC 1 cut(s) 103
MlsI TGGCCA 1 cut(s) 1221
MluNI TGGCCA 1 cut(s) 1221
MlyI GAGTC 2 cut(s) 887, 998
MmeI TCCRAC 2 cut(s) 980, 1502
Mox20I TGGCCA 1 cut(s) 1221
Mph1103I ATGCAT 3 cut(s) 1243, 1249, 1530
MroI TCCGGA 2 cut(s) 74, 1341
MroXI GAANNNNTTC 2 cut(s) 315, 1575
MscI TGGCCA 1 cut(s) 1221
MseI TTAA 7 cut(s) 135, 1164, 1175, 1292, 1503, 1512, 1808
MslI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
Msp20I TGGCCA 1 cut(s) 1221
MspI CCGG 2 cut(s) 75, 1342
MspR9I CCNGG 4 cut(s) 783, 856, 1150, 1226
MunI CAATTG 2 cut(s) 434, 1441
Mva1269I GAATGC 1 cut(s) 887
MvaI CCWGG 4 cut(s) 783, 856, 1150, 1226
MwoI GCNNNNNNNGC 2 cut(s) 385, 944
NcoI CCATGG 1 cut(s) 1641
NdeI CATATG 2 cut(s) 1243, 1651
NdeII GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
NheI GCTAGC 1 cut(s) 1117
NlaIII CATG 9 cut(s) 479, 521, 947, 1241, 1337, 1532, 1645, 1822, 1915
NlaIV GGNNCC 2 cut(s) 1719, 1771
NmuCI GTSAC 2 cut(s) 41, 323
NsiI ATGCAT 3 cut(s) 1243, 1249, 1530
NspI RCATGY 2 cut(s) 947, 1241
NspV TTCGAA 1 cut(s) 1675
PaeI GCATGC 1 cut(s) 947
PagI TCATGA 1 cut(s) 1333
PciSI GCTCTTC 1 cut(s) 540
PctI GAATGC 1 cut(s) 887
PdmI GAANNNNTTC 2 cut(s) 315, 1575
PfeI GAWTC 6 cut(s) 251, 416, 509, 1003, 1474, 1672
PflMI CCANNNNNTGG 1 cut(s) 523
PkrI GCNGC 3 cut(s) 205, 874, 1116
PleI GAGTC 2 cut(s) 887, 997
PpsI GAGTC 2 cut(s) 887, 997
PpuMI RGGWCCY 1 cut(s) 1752
PshBI ATTAAT 1 cut(s) 1808
Psp5II RGGWCCY 1 cut(s) 1752
Psp6I CCWGG 4 cut(s) 781, 854, 1148, 1224
PspGI CCWGG 4 cut(s) 781, 854, 1148, 1224
PspN4I GGNNCC 2 cut(s) 1719, 1771
PspPI GGNCC 3 cut(s) 1752, 1769, 1915
PspPPI RGGWCCY 1 cut(s) 1752
PsuI RGATCY 2 cut(s) 65, 1338
RsaI GTAC 3 cut(s) 1131, 1202, 1719
RsaNI GTAC 3 cut(s) 1130, 1201, 1718
RseI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
SapI GCTCTTC 1 cut(s) 540
SaqAI TTAA 7 cut(s) 135, 1164, 1175, 1292, 1503, 1512, 1808
SatI GCNGC 3 cut(s) 204, 873, 1115
Sau3AI GATC 6 cut(s) 65, 85, 484, 1330, 1338, 1531
Sau96I GGNCC 3 cut(s) 1752, 1769, 1915
SchI GAGTC 2 cut(s) 887, 998
ScrFI CCNGG 4 cut(s) 783, 856, 1150, 1226
SduI GDGCHC 1 cut(s) 103
SfaNI GCATC 8 cut(s) 130, 190, 309, 559, 1039, 1256, 1515, 1627
SfuI TTCGAA 1 cut(s) 1675
SinI GGWCC 2 cut(s) 1752, 1915
SmiMI CAYNNNNRTG 5 cut(s) 880, 948, 1067, 1242, 1605
SmlI CTYRAG 1 cut(s) 1921
SmoI CTYRAG 1 cut(s) 1921
SphI GCATGC 1 cut(s) 947
SsiI CCGC 3 cut(s) 585, 1115, 1562
SspI AATATT 1 cut(s) 1510
SspMI CTAG 3 cut(s) 503, 1118, 1896
StyD4I CCNGG 4 cut(s) 781, 854, 1148, 1224
StyI CCWWGG 1 cut(s) 1641
TaaI ACNGT 2 cut(s) 560, 959
TaqI TCGA 2 cut(s) 1675, 1930
TatI WGTACW 2 cut(s) 1129, 1200
TauI GCSGC 1 cut(s) 1117
TfiI GAWTC 6 cut(s) 251, 416, 509, 1003, 1474, 1672
Tru1I TTAA 7 cut(s) 135, 1164, 1175, 1292, 1503, 1512, 1808
Tru9I TTAA 7 cut(s) 135, 1164, 1175, 1292, 1503, 1512, 1808
TseFI GTSAC 2 cut(s) 41, 323
TseI GCWGC 2 cut(s) 203, 872
Tsp45I GTSAC 2 cut(s) 41, 323
TspDTI ATGAA 9 cut(s) 37, 109, 295, 534, 765, 822, 903, 942, 1361
Van91I CCANNNNNTGG 1 cut(s) 523
VpaK11BI GGWCC 2 cut(s) 1752, 1915
VspI ATTAAT 1 cut(s) 1808
XapI RAATTY 1 cut(s) 1573
XceI RCATGY 2 cut(s) 947, 1241
XcmI CCANNNNNNNNNTGG 1 cut(s) 524
XmiI GTMKAC 1 cut(s) 1689
XmnI GAANNNNTTC 2 cut(s) 315, 1575
XspI CTAG 3 cut(s) 503, 1118, 1896
Zsp2I ATGCAT 3 cut(s) 1243, 1249, 1530
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.