Rroxscaffold_4G00309050

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Reverse (-)
30682019 .. 30690893
8875 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00309050.1

Sequence Viewer

Length: 711 bp
ATGCCCATCACAAATGCAAATGGGTCCGCCGCCTTCCTTCGAACCGACAACAACCCCACCGGTCGGAAACCCGATCCCAATAAACCGAAGTCGATCGCTCCGACGTCGGCAAAGCTTCGAGCTTCTTTGGTTGAGTTCGAACAAGCTCGCCGATCGATCCATGGGTTAACCAATCTAAAAAAACTATGCATAATTGCATCACAGTCTGGTCACTTGGAAAAGTCAAAGAACGTGTTGATATCAAGAAGTATAACAAATGAGCATCTTCGGTCGCTATCTCTGCAGGCAGGCCAATTCAGTGAAGGGGATATACCAACCGATATAGTATTAAGCTGTCCTCAGCTATACAAGTTGCGATTGGAGGGGAAAATGACAGCGTTACCAAAAGAGCTCCCAAGCCTCACCAAGATAACGCTGAGAAAAACAAGACTGAAGGGTGACCAGATTGAAATACTGGAGAAGCTGCCCAACTTAAGGGTGCTTTTCCTCGGTAATTATGCTTTCGAATCAGAAACAATGGTTTTCTCCCAAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTAGATGGTGGGACGATTTGAAGGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGAGCATTGAATGGTGCGACCATTTGCGGGGGAGTTCCAGATGGGCTTCGGGAGATTACTACCCTCAAGGAATTAACAATTGA

Protein Analysis

236

Amino Acids

26.71

Weight (kDa)

9.46

Isoelectric Point (pI)

53.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 52 - 214 3.3e-14 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 107
AciI CCGC 3 cut(s) 27, 30, 655
AclWI GGATC 2 cut(s) 68, 151
AcsI RAATTY 1 cut(s) 551
AcuI CTGAAG 2 cut(s) 452, 605
AcyI GRCGYC 1 cut(s) 104
AfiI CCNNNNNNNGG 4 cut(s) 63, 474, 567, 655
AflII CTTAAG 1 cut(s) 472
AflIII ACRYGT 1 cut(s) 231
AgeI ACCGGT 1 cut(s) 59
AgsI TTSAA 3 cut(s) 449, 583, 638
AjuI GAANNNNNNNTTGG 2 cut(s) 522, 554
AluBI AGCT 7 cut(s) 115, 122, 146, 333, 343, 391, 463
AluI AGCT 7 cut(s) 115, 122, 146, 333, 343, 391, 463
Alw21I GWGCWC 1 cut(s) 393
AlwI GGATC 2 cut(s) 68, 151
AoxI GGCC 1 cut(s) 289
ApeKI GCWGC 1 cut(s) 463
ApoI RAATTY 1 cut(s) 551
AsiGI ACCGGT 1 cut(s) 59
AspS9I GGNCC 1 cut(s) 24
AsuHPI GGTGA 2 cut(s) 394, 449
AsuII TTCGAA 3 cut(s) 40, 138, 504
AvaII GGWCC 1 cut(s) 24
BanII GRGCYC 1 cut(s) 393
BarI GAAGNNNNNNTAC 2 cut(s) 294, 326
BbsI GAAGAC 1 cut(s) 611
Bbv12I GWGCWC 1 cut(s) 393
BbvCI CCTCAGC 1 cut(s) 339
BbvI GCAGC 1 cut(s) 450
BccI CCATC 3 cut(s) 14, 561, 663
BfaI CTAG 1 cut(s) 615
BfmI CTRYAG 1 cut(s) 281
BfrI CTTAAG 1 cut(s) 472
BisI GCNGC 2 cut(s) 30, 464
BlsI GCNGC 2 cut(s) 31, 465
Bme18I GGWCC 1 cut(s) 24
BmgT120I GGNCC 1 cut(s) 24
BmiI GGNNCC 1 cut(s) 25
BmsI GCATC 2 cut(s) 206, 271
BpiI GAAGAC 1 cut(s) 611
BpmI CTGGAG 1 cut(s) 476
Bpu10I CCTNAGC 1 cut(s) 339
Bpu14I TTCGAA 3 cut(s) 40, 138, 504
BpuEI CTTGAG 1 cut(s) 678
Bsa29I ATCGAT 1 cut(s) 155
BsaHI GRCGYC 1 cut(s) 104
BsaJI CCNNGG 3 cut(s) 160, 487, 529
BsaWI WCCGGW 1 cut(s) 59
Bsc4I CCNNNNNNNGG 4 cut(s) 63, 474, 567, 655
Bse118I RCCGGY 1 cut(s) 59
Bse1I ACTGG 1 cut(s) 459
BseCI ATCGAT 1 cut(s) 155
BseDI CCNNGG 3 cut(s) 160, 487, 529
BseLI CCNNNNNNNGG 4 cut(s) 63, 474, 567, 655
BseMII CTCAG 2 cut(s) 353, 407
BseNI ACTGG 1 cut(s) 459
BseXI GCAGC 1 cut(s) 450
Bsh1285I CGRYCG 4 cut(s) 64, 96, 155, 272
BshFI GGCC 1 cut(s) 291
BshTI ACCGGT 1 cut(s) 59
BshVI ATCGAT 1 cut(s) 155
BsiEI CGRYCG 4 cut(s) 64, 96, 155, 272
BsiHKAI GWGCWC 1 cut(s) 393
BsiSI CCGG 1 cut(s) 60
BslFI GGGAC 1 cut(s) 587
BslI CCNNNNNNNGG 4 cut(s) 63, 474, 567, 655
BsmFI GGGAC 1 cut(s) 587
BsnI GGCC 1 cut(s) 291
Bsp119I TTCGAA 3 cut(s) 40, 138, 504
Bsp1286I GDGCHC 1 cut(s) 393
Bsp143I GATC 4 cut(s) 73, 93, 152, 156
Bsp19I CCATGG 1 cut(s) 160
BspACI CCGC 3 cut(s) 27, 30, 655
BspANI GGCC 1 cut(s) 291
BspCNI CTCAG 2 cut(s) 352, 408
BspDI ATCGAT 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 25
BspMAI CTGCAG 1 cut(s) 285
BspPI GGATC 2 cut(s) 68, 151
BspT104I TTCGAA 3 cut(s) 40, 138, 504
BspTI CTTAAG 1 cut(s) 472
BsrFI RCCGGY 1 cut(s) 59
BsrI ACTGG 1 cut(s) 459
BssAI RCCGGY 1 cut(s) 59
BssECI CCNNGG 3 cut(s) 160, 487, 529
BssMI GATC 4 cut(s) 73, 93, 152, 156
BssNI GRCGYC 1 cut(s) 104
BssT1I CCWWGG 2 cut(s) 160, 529
Bst4CI ACNGT 1 cut(s) 204
BstACI GRCGYC 1 cut(s) 104
BstAFI CTTAAG 1 cut(s) 472
BstBI TTCGAA 3 cut(s) 40, 138, 504
BstC8I GCNNGC 3 cut(s) 148, 285, 289
BstDEI CTNAG 3 cut(s) 339, 416, 563
BstDSI CCRYGG 1 cut(s) 160
BstEII GGTNACC 1 cut(s) 437
BstKTI GATC 4 cut(s) 76, 96, 155, 159
BstMBI GATC 4 cut(s) 73, 93, 152, 156
BstMCI CGRYCG 4 cut(s) 64, 96, 155, 272
BstMWI GCNNNNNNNGC 1 cut(s) 280
BstPI GGTNACC 1 cut(s) 437
BstSFI CTRYAG 1 cut(s) 281
BstV1I GCAGC 1 cut(s) 450
BstV2I GAAGAC 1 cut(s) 611
Bsu15I ATCGAT 1 cut(s) 155
BsuRI GGCC 1 cut(s) 291
BsuTUI ATCGAT 1 cut(s) 155
BtgI CCRYGG 1 cut(s) 160
BtsIMutI CAGTG 1 cut(s) 304
Cac8I GCNNGC 3 cut(s) 148, 285, 289
Cfr10I RCCGGY 1 cut(s) 59
Cfr13I GGNCC 1 cut(s) 24
ClaI ATCGAT 1 cut(s) 155
CspAI ACCGGT 1 cut(s) 59
CviAII CATG 2 cut(s) 161, 610
DdeI CTNAG 3 cut(s) 339, 416, 563
DpnI GATC 4 cut(s) 75, 95, 154, 158
DpnII GATC 4 cut(s) 73, 93, 152, 156
EciI GGCGGA 1 cut(s) 16
Ecl136II GAGCTC 1 cut(s) 391
Eco130I CCWWGG 2 cut(s) 160, 529
Eco24I GRGCYC 1 cut(s) 393
Eco32I GATATC 1 cut(s) 240
Eco47I GGWCC 1 cut(s) 24
Eco53kI GAGCTC 1 cut(s) 391
Eco57I CTGAAG 2 cut(s) 452, 605
Eco91I GGTNACC 1 cut(s) 437
EcoICRI GAGCTC 1 cut(s) 391
EcoO65I GGTNACC 1 cut(s) 437
EcoRV GATATC 1 cut(s) 240
EcoT14I CCWWGG 2 cut(s) 160, 529
EcoT22I ATGCAT 1 cut(s) 191
EcoT38I GRGCYC 1 cut(s) 393
ErhI CCWWGG 2 cut(s) 160, 529
FaeI CATG 2 cut(s) 164, 613
FaiI YATR 9 cut(s) 162, 187, 191, 251, 311, 323, 346, 498, 611
FaqI GGGAC 1 cut(s) 587
FatI CATG 2 cut(s) 160, 609
FauI CCCGC 1 cut(s) 648
Fnu4HI GCNGC 2 cut(s) 30, 464
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 2 cut(s) 30, 464
FspBI CTAG 1 cut(s) 615
GluI GCNGC 2 cut(s) 30, 464
GsuI CTGGAG 1 cut(s) 476
HaeIII GGCC 1 cut(s) 291
HapII CCGG 1 cut(s) 60
Hin1I GRCGYC 1 cut(s) 104
Hin1II CATG 2 cut(s) 164, 613
HincII GTYRAC 1 cut(s) 168
HindII GTYRAC 1 cut(s) 168
HindIII AAGCTT 1 cut(s) 113
HinfI GANTC 1 cut(s) 506
HpaI GTTAAC 1 cut(s) 168
HpaII CCGG 1 cut(s) 60
HphI GGTGA 2 cut(s) 394, 449
Hpy166II GTNNAC 1 cut(s) 168
Hpy188I TCNGA 4 cut(s) 66, 102, 511, 624
Hpy188III TCNNGA 4 cut(s) 243, 548, 666, 678
Hpy8I GTNNAC 1 cut(s) 168
Hpy99I CGWCG 2 cut(s) 106, 109
HpyAV CCTTC 5 cut(s) 43, 47, 296, 427, 577
HpyCH4III ACNGT 1 cut(s) 204
HpyCH4IV ACGT 2 cut(s) 104, 231
HpyCH4V TGCA 4 cut(s) 17, 189, 197, 283
HpyF10VI GCNNNNNNNGC 1 cut(s) 280
HpyF3I CTNAG 3 cut(s) 339, 416, 563
HpySE526I ACGT 2 cut(s) 104, 231
Hsp92I GRCGYC 1 cut(s) 104
Hsp92II CATG 2 cut(s) 164, 613
KspAI GTTAAC 1 cut(s) 168
Kzo9I GATC 4 cut(s) 73, 93, 152, 156
LmnI GCTCC 2 cut(s) 103, 396
LpnPI CCDG 8 cut(s) 73, 192, 269, 273, 440, 455, 533, 679
Lsp1109I GCAGC 1 cut(s) 450
LweI GCATC 2 cut(s) 206, 271
MaeI CTAG 1 cut(s) 615
MaeII ACGT 2 cut(s) 104, 231
MaeIII GTNAC 3 cut(s) 209, 378, 437
MalI GATC 4 cut(s) 75, 95, 154, 158
MboI GATC 4 cut(s) 73, 93, 152, 156
MboII GAAGA 2 cut(s) 257, 611
MfeI CAATTG 1 cut(s) 706
MhlI GDGCHC 1 cut(s) 393
MluCI AATT 6 cut(s) 192, 293, 493, 551, 699, 706
MmeI TCCRAC 2 cut(s) 44, 125
MnlI CCTC 8 cut(s) 348, 355, 410, 497, 527, 552, 585, 702
Mph1103I ATGCAT 1 cut(s) 191
MseI TTAA 4 cut(s) 167, 329, 473, 702
MspCI CTTAAG 1 cut(s) 472
MspI CCGG 1 cut(s) 60
MunI CAATTG 1 cut(s) 706
MwoI GCNNNNNNNGC 1 cut(s) 280
NcoI CCATGG 1 cut(s) 160
NdeII GATC 4 cut(s) 73, 93, 152, 156
NlaIII CATG 2 cut(s) 164, 613
NlaIV GGNNCC 1 cut(s) 25
NmuCI GTSAC 2 cut(s) 209, 437
NsiI ATGCAT 1 cut(s) 191
NspV TTCGAA 3 cut(s) 40, 138, 504
PcsI WCGNNNNNNNCGW 1 cut(s) 98
PfeI GAWTC 1 cut(s) 506
PinAI ACCGGT 1 cut(s) 59
PkrI GCNGC 2 cut(s) 31, 465
Ple19I CGATCG 2 cut(s) 96, 155
Psp124BI GAGCTC 1 cut(s) 393
PspEI GGTNACC 1 cut(s) 437
PspN4I GGNNCC 1 cut(s) 25
PspPI GGNCC 1 cut(s) 24
PstI CTGCAG 1 cut(s) 285
PvuI CGATCG 2 cut(s) 96, 155
SacI GAGCTC 1 cut(s) 393
SaqAI TTAA 4 cut(s) 167, 329, 473, 702
SatI GCNGC 2 cut(s) 30, 464
Sau3AI GATC 4 cut(s) 73, 93, 152, 156
Sau96I GGNCC 1 cut(s) 24
SduI GDGCHC 1 cut(s) 393
SetI ASST 9 cut(s) 107, 117, 124, 148, 234, 335, 345, 393, 465
SfaNI GCATC 2 cut(s) 206, 271
SfcI CTRYAG 1 cut(s) 281
SfuI TTCGAA 3 cut(s) 40, 138, 504
SinI GGWCC 1 cut(s) 24
SmlI CTYRAG 2 cut(s) 472, 693
SmoI CTYRAG 2 cut(s) 472, 693
Sse9I AATT 6 cut(s) 192, 293, 493, 551, 699, 706
SsiI CCGC 3 cut(s) 27, 30, 655
SspMI CTAG 1 cut(s) 615
SstI GAGCTC 1 cut(s) 393
StyI CCWWGG 2 cut(s) 160, 529
TaaI ACNGT 1 cut(s) 204
TaiI ACGT 2 cut(s) 107, 234
TaqI TCGA 6 cut(s) 40, 92, 118, 138, 155, 504
TaqII GACCGA 1 cut(s) 258
TasI AATT 6 cut(s) 192, 293, 493, 551, 699, 706
TauI GCSGC 1 cut(s) 32
TfiI GAWTC 1 cut(s) 506
Tru1I TTAA 4 cut(s) 167, 329, 473, 702
Tru9I TTAA 4 cut(s) 167, 329, 473, 702
TscAI CASTG 1 cut(s) 304
TseFI GTSAC 2 cut(s) 209, 437
TseI GCWGC 1 cut(s) 463
Tsp45I GTSAC 2 cut(s) 209, 437
TspRI CASTG 1 cut(s) 304
Vha464I CTTAAG 1 cut(s) 472
VpaK11BI GGWCC 1 cut(s) 24
XapI RAATTY 1 cut(s) 551
XspI CTAG 1 cut(s) 615
ZraI GACGTC 1 cut(s) 105
Zsp2I ATGCAT 1 cut(s) 191
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.