pycom04g21110

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Reverse (-)
22441496 .. 22443866
2371 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g21110.1

Sequence Viewer

Length: 1926 bp
ATGAGTGAAGAAAAACAAGGTCGAGTTGTGTCCATCTGTGGGATGGGCGGGTTGGGGAAGACCACTCTCGCCAAGGAAGTTTACCGCAATGATCATGTTAGGCGGTATTTTGACGGTTCTGCGTGGGCTTACATATCTCAACAATGCAAACCAAGAGATGTTTGGGAAGGCATTCTGATTAAGCTAACCTCTCCGTCGAAAGAGGAGAGGGATCACATTTTGAAATTGAGAGACGAAGAGCTTGCAAAGAAGCTTTATCAAGTTCAAATAGAGAAGAAGTATTTGGTGGTTCTTGATGACATTTGGTCGATTGAGGCCTGGAAAATTCTGAGTCCTGCCTTTCCATCGTCGGGAAAAGGGTGCAGCAGAATATTGCTTACAACTCGTAACAAGGACTTAGCTTCCTTTGTAGACCGAAGCGGTCTTCATGAGCCGAGGAACTTAACTGAAGAAGAGGGTTGGGAGTTGCTTCAGAAGAAGGCATTTCCAAGAAATGGTGATCCGGATTTTACCAGAAGCATAGATAAGGAGCAGTTAGGGAGGGAAATGGTGAAAAAGTGTGCTGGCTTGCCTTTGGCCATTGTTGTGCTTGGAGGACTTTTGGCCACTAAAGAAACAGTGCACGAGTGGGATATCGTCCTCAGAGATATTCTTTCATATCTAAAGCGAGCCAAAGGGCACGAGCAGCACTCTACGGTACCTGAGGTTTTGGCTTTGAGTTATCATGATTTGCCTTTCCAACTGAAACCCTGTTTCTTTTATTTGAGCCATTTTCCGGAAGATTTTGAAATTCCGAGGAGAAAACTGGTTCAATTATGGATTGCAGAAGGCATTGTATCGCCACACCATGAAGCAGAGGGAGATGAAACAATAGAGGATGTTGCAGAACGCTACTTGGGTTACTTGATTAATAGGTGTATGGTTCAAGTGGGAGCTCTCAGCTCAACCGGAAGAATTAAAACTTGCCGCCTGCATGATCTTATGCGTGACTTGTGCTTGTCGAAAGCAAAGCAGGAAAATTTTCTCCAGAATGTTCACTATTCGGATGAAGGTATGATGGTGGATTCTTCTTCTTCTCGCATGCTTTCTGAAGCAACATCAACTGGTAAAACTCGCAGACTTGCTGTCTTCTTACCTTCACTTGTTGATAATCTTATCCCGTCTAAATACAAAGAAGATTCCAGCCTCAGTCTCAGGTCACTTGTATATTTCCATGCAAGCAAGTGTAGATTGGTAAGTTGGCAGCTTACAAAAACAATTTTGGAGTTCAAAATGCTCAAAGTTCTCGACCTTGAAGGTGTCAAGGGACCGTACGAAAAGTTACCTAAAGATATCGGGGGCTTGGTTCAGTTGCAGTTTCTAAGTTTGAAGAAAACACGTATACAAGCATTGCCATCATCCATCGGCAATTTGATCCACTTGAAAACTCTAAATTTGCAAACCATAAGCAAATTGAGTTGGGACCCGACAGTGCAAATTCCAAATGTGATTTGGAAGATGGAAGGGCTAAGACATTTATATCTTCCCAAGTGGTGTGGCAATGCAGTTGATAAGCTGCAACTGGGAAATCTGATTAACTTGCAGACACTCGTAAACTTTCCTGCAAACAAATGTGATGTAGAAGATCTTCAAAAGTTGACCAATCTTAGAAAATTGGTGTTGAATAAGATCGATCCAAAACATTTCAATAGTTTGATGAAAATTTTCAATCCCCAAAGCAGAACGTTAAGCTGCCTCGAGTCTTTGTCCTTGACAAGTGAGACACTTTCATTCCCTGATGAGGTTGTTGATGTTAGACAAGTAATGTTAAGTTGTCGCCGTCTTCAAAAATTGCACGTGCAAGGGCGGATAGAGAAGCTGCCAGAATACCATCAGTTCCCTCCAAACCTTGCCAAGTTAACATTGTGGGGCTCTAAACTTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

642

Amino Acids

73.31

Weight (kDa)

8.96

Isoelectric Point (pI)

46.67

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 4 - 165 5.4e-40 NB-ARC domain
WHD_DRP PF23559 258 - 332 7.9e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 398 - 635 2.1e-25 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 697
AccB1I GGYRCC 1 cut(s) 697
AccB7I CCANNNNNTGG 1 cut(s) 494
AccI GTMKAC 2 cut(s) 411, 1381
AccIII TCCGGA 2 cut(s) 502, 775
AciI CCGC 6 cut(s) 48, 85, 103, 420, 967, 1846
AclI AACGTT 1 cut(s) 1724
AclWI GGATC 4 cut(s) 219, 494, 1408, 1667
AcoI YGGCCR 2 cut(s) 576, 603
AcsI RAATTY 6 cut(s) 324, 789, 1018, 1432, 1476, 1701
AcuI CTGAAG 3 cut(s) 455, 468, 1110
AcvI CACGTG 1 cut(s) 1837
AfaI GTAC 2 cut(s) 699, 1313
AfiI CCNNNNNNNGG 5 cut(s) 39, 350, 494, 775, 1780
AflIII ACRYGT 1 cut(s) 1376
AhdI GACNNNNNGTC 2 cut(s) 304, 1124
AjnI CCWGG 1 cut(s) 317
AjuI GAANNNNNNNTTGG 2 cut(s) 266, 298
Alw21I GWGCWC 2 cut(s) 624, 937
Alw26I GTCTC 3 cut(s) 225, 1196, 1754
Alw44I GTGCAC 1 cut(s) 620
AlwI GGATC 4 cut(s) 219, 494, 1408, 1667
Ama87I CYCGRG 1 cut(s) 1736
Aor13HI TCCGGA 2 cut(s) 502, 775
AoxI GGCC 3 cut(s) 315, 576, 603
ApaLI GTGCAC 1 cut(s) 620
ApeKI GCWGC 6 cut(s) 363, 685, 1243, 1555, 1731, 1858
ApoI RAATTY 6 cut(s) 324, 789, 1018, 1432, 1476, 1701
AseI ATTAAT 1 cut(s) 909
Asp700I GAANNNNTTC 4 cut(s) 171, 1020, 1626, 1703
Asp718I GGTACC 1 cut(s) 697
AspS9I GGNCC 2 cut(s) 1307, 1462
AsuHPI GGTGA 2 cut(s) 509, 562
AvaI CYCGRG 1 cut(s) 1736
AvaII GGWCC 2 cut(s) 1307, 1462
AxyI CCTNAGG 1 cut(s) 702
BaeGI GKGCMC 2 cut(s) 624, 681
BalI TGGCCA 2 cut(s) 578, 605
BanI GGYRCC 1 cut(s) 697
BanII GRGCYC 2 cut(s) 937, 1913
BarI GAAGNNNNNNTAC 2 cut(s) 1611, 1643
BauI CACGAG 2 cut(s) 623, 680
BbrPI CACGTG 1 cut(s) 1837
BbsI GAAGAC 4 cut(s) 65, 416, 1120, 1814
Bbv12I GWGCWC 2 cut(s) 624, 937
BbvI GCAGC 6 cut(s) 375, 697, 1255, 1542, 1718, 1845
BccI CCATC 8 cut(s) 37, 41, 352, 1051, 1402, 1409, 1492, 1878
BceAI ACGGC 1 cut(s) 1803
BcgI CGANNNNNNTGC 2 cut(s) 224, 258
BciT130I CCWGG 1 cut(s) 319
BclI TGATCA 1 cut(s) 91
BcoDI GTCTC 3 cut(s) 225, 1196, 1754
BglII AGATCT 1 cut(s) 1624
BisI GCNGC 7 cut(s) 364, 686, 967, 1244, 1556, 1732, 1859
BlsI GCNGC 7 cut(s) 365, 687, 968, 1245, 1557, 1733, 1860
Bme1390I CCNGG 1 cut(s) 319
Bme18I GGWCC 2 cut(s) 1307, 1462
BmeRI GACNNNNNGTC 2 cut(s) 304, 1124
BmeT110I CYCGRG 1 cut(s) 1736
BmgT120I GGNCC 2 cut(s) 1307, 1462
BmiI GGNNCC 4 cut(s) 699, 1308, 1463, 1464
BmrFI CCNGG 1 cut(s) 319
BmrI ACTGGG 1 cut(s) 1571
BmuI ACTGGG 1 cut(s) 1571
BpiI GAAGAC 4 cut(s) 65, 416, 1120, 1814
BplI GAGNNNNNCTC 2 cut(s) 674, 706
BpmI CTGGAG 1 cut(s) 1010
Bsa29I ATCGAT 1 cut(s) 1671
BsaAI YACGTR 2 cut(s) 1379, 1837
BsaJI CCNNGG 3 cut(s) 72, 434, 794
BsaWI WCCGGW 3 cut(s) 502, 775, 947
Bsc4I CCNNNNNNNGG 5 cut(s) 39, 350, 494, 775, 1780
Bse1I ACTGG 3 cut(s) 810, 1108, 1566
Bse21I CCTNAGG 1 cut(s) 702
Bse3DI GCAATG 3 cut(s) 94, 1388, 1546
BseAI TCCGGA 2 cut(s) 502, 775
BseBI CCWGG 1 cut(s) 319
BseCI ATCGAT 1 cut(s) 1671
BseDI CCNNGG 3 cut(s) 72, 434, 794
BseGI GGATG 4 cut(s) 48, 883, 1051, 1397
BseLI CCNNNNNNNGG 5 cut(s) 39, 350, 494, 775, 1780
BseMI GCAATG 3 cut(s) 94, 1388, 1546
BseMII CTCAG 6 cut(s) 320, 655, 693, 952, 1201, 1207
BseNI ACTGG 3 cut(s) 810, 1108, 1566
BseRI GAGGAG 2 cut(s) 218, 811
BseSI GKGCMC 2 cut(s) 624, 681
BseXI GCAGC 6 cut(s) 375, 697, 1255, 1542, 1718, 1845
BsgI GTGCAG 1 cut(s) 382
BshFI GGCC 3 cut(s) 317, 578, 605
BshNI GGYRCC 1 cut(s) 697
BshVI ATCGAT 1 cut(s) 1671
BsiHKAI GWGCWC 2 cut(s) 624, 937
BsiHKCI CYCGRG 1 cut(s) 1736
BsiSI CCGG 3 cut(s) 503, 776, 948
BsiWI CGTACG 1 cut(s) 1311
BslFI GGGAC 2 cut(s) 1320, 1475
BslI CCNNNNNNNGG 5 cut(s) 39, 350, 494, 775, 1780
BsmAI GTCTC 3 cut(s) 225, 1196, 1754
BsmBI CGTCTC 1 cut(s) 225
BsmFI GGGAC 2 cut(s) 1320, 1475
BsmI GAATGC 1 cut(s) 171
BsnI GGCC 3 cut(s) 317, 578, 605
BsoBI CYCGRG 1 cut(s) 1736
Bsp1286I GDGCHC 4 cut(s) 624, 681, 937, 1913
Bsp13I TCCGGA 2 cut(s) 502, 775
Bsp143I GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
BspACI CCGC 6 cut(s) 48, 85, 103, 420, 967, 1846
BspANI GGCC 3 cut(s) 317, 578, 605
BspCNI CTCAG 6 cut(s) 321, 654, 694, 951, 1200, 1206
BspDI ATCGAT 1 cut(s) 1671
BspEI TCCGGA 2 cut(s) 502, 775
BspHI TCATGA 2 cut(s) 427, 724
BspLI GGNNCC 4 cut(s) 699, 1308, 1463, 1464
BspPI GGATC 4 cut(s) 219, 494, 1408, 1667
BspQI GCTCTTC 1 cut(s) 231
BspT107I GGYRCC 1 cut(s) 697
BsrDI GCAATG 3 cut(s) 94, 1388, 1546
BsrI ACTGG 3 cut(s) 810, 1108, 1566
BssECI CCNNGG 3 cut(s) 72, 434, 794
BssMI GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
BssNAI GTATAC 1 cut(s) 1382
BssSI CACGAG 2 cut(s) 623, 680
BssT1I CCWWGG 1 cut(s) 72
Bst1107I GTATAC 1 cut(s) 1382
Bst2BI CACGAG 2 cut(s) 623, 680
Bst2UI CCWGG 1 cut(s) 319
Bst4CI ACNGT 5 cut(s) 116, 619, 697, 1311, 1471
Bst6I CTCTTC 2 cut(s) 231, 447
BstBAI YACGTR 2 cut(s) 1379, 1837
BstC8I GCNNGC 7 cut(s) 243, 565, 569, 669, 971, 1082, 1219
BstF5I GGATG 4 cut(s) 48, 883, 1051, 1397
BstKTI GATC 8 cut(s) 94, 214, 502, 979, 1416, 1627, 1671, 1675
BstMAI GTCTC 3 cut(s) 225, 1196, 1754
BstMBI GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
BstMWI GCNNNNNNNGC 1 cut(s) 685
BstNI CCWGG 1 cut(s) 319
BstNSI RCATGY 1 cut(s) 1084
BstSCI CCNGG 1 cut(s) 317
BstSLI GKGCMC 2 cut(s) 624, 681
BstV1I GCAGC 6 cut(s) 375, 697, 1255, 1542, 1718, 1845
BstV2I GAAGAC 4 cut(s) 65, 416, 1120, 1814
BstX2I RGATCY 1 cut(s) 1624
BstYI RGATCY 1 cut(s) 1624
BstZ17I GTATAC 1 cut(s) 1382
Bsu15I ATCGAT 1 cut(s) 1671
Bsu36I CCTNAGG 1 cut(s) 702
BsuRI GGCC 3 cut(s) 317, 578, 605
BsuTUI ATCGAT 1 cut(s) 1671
BtsCI GGATG 4 cut(s) 48, 883, 1051, 1397
BtsIMutI CAGTG 2 cut(s) 624, 1476
Cac8I GCNNGC 7 cut(s) 243, 565, 569, 669, 971, 1082, 1219
CciI TCATGA 2 cut(s) 427, 724
Cfr13I GGNCC 2 cut(s) 1307, 1462
ClaI ATCGAT 1 cut(s) 1671
Csp6I GTAC 2 cut(s) 698, 1312
CspCI CAANNNNNGTGG 2 cut(s) 1516, 1551
CviAII CATG 7 cut(s) 95, 428, 725, 848, 974, 1081, 1214
CviQI GTAC 2 cut(s) 698, 1312
DpnI GATC 8 cut(s) 93, 213, 501, 978, 1415, 1626, 1670, 1674
DpnII GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
DriI GACNNNNNGTC 2 cut(s) 304, 1124
EaeI YGGCCR 2 cut(s) 576, 603
Eam1104I CTCTTC 2 cut(s) 231, 447
Eam1105I GACNNNNNGTC 2 cut(s) 304, 1124
EarI CTCTTC 2 cut(s) 231, 447
EciI GGCGGA 1 cut(s) 1861
Ecl136II GAGCTC 1 cut(s) 935
Eco130I CCWWGG 1 cut(s) 72
Eco147I AGGCCT 1 cut(s) 317
Eco24I GRGCYC 2 cut(s) 937, 1913
Eco32I GATATC 2 cut(s) 634, 1333
Eco47I GGWCC 2 cut(s) 1307, 1462
Eco53kI GAGCTC 1 cut(s) 935
Eco57I CTGAAG 3 cut(s) 455, 468, 1110
Eco72I CACGTG 1 cut(s) 1837
Eco81I CCTNAGG 1 cut(s) 702
Eco88I CYCGRG 1 cut(s) 1736
EcoICRI GAGCTC 1 cut(s) 935
EcoO109I RGGNCCY 1 cut(s) 1462
EcoRII CCWGG 1 cut(s) 317
EcoRV GATATC 2 cut(s) 634, 1333
EcoT14I CCWWGG 1 cut(s) 72
EcoT38I GRGCYC 2 cut(s) 937, 1913
ErhI CCWWGG 1 cut(s) 72
Esp3I CGTCTC 1 cut(s) 225
FaeI CATG 7 cut(s) 98, 431, 728, 851, 977, 1084, 1217
FaqI GGGAC 2 cut(s) 1320, 1475
FatI CATG 7 cut(s) 94, 427, 724, 847, 973, 1080, 1213
FauI CCCGC 1 cut(s) 41
FbaI TGATCA 1 cut(s) 91
FblI GTMKAC 2 cut(s) 411, 1381
Fnu4HI GCNGC 7 cut(s) 364, 686, 967, 1244, 1556, 1732, 1859
FokI GGATG 4 cut(s) 55, 890, 1058, 1384
FriOI GRGCYC 2 cut(s) 937, 1913
Fsp4HI GCNGC 7 cut(s) 364, 686, 967, 1244, 1556, 1732, 1859
GluI GCNGC 7 cut(s) 364, 686, 967, 1244, 1556, 1732, 1859
GsuI CTGGAG 1 cut(s) 1010
HaeIII GGCC 3 cut(s) 317, 578, 605
HapII CCGG 3 cut(s) 503, 776, 948
Hin1II CATG 7 cut(s) 98, 431, 728, 851, 977, 1084, 1217
HincII GTYRAC 2 cut(s) 1638, 1899
HindII GTYRAC 2 cut(s) 1638, 1899
HindIII AAGCTT 1 cut(s) 251
HinfI GANTC 4 cut(s) 331, 1064, 1178, 1739
HpaI GTTAAC 1 cut(s) 1899
HpaII CCGG 3 cut(s) 503, 776, 948
HphI GGTGA 2 cut(s) 509, 562
Hpy166II GTNNAC 8 cut(s) 82, 412, 622, 1036, 1382, 1594, 1638, 1899
Hpy188I TCNGA 8 cut(s) 177, 330, 474, 644, 795, 1045, 1090, 1572
Hpy188III TCNNGA 8 cut(s) 293, 351, 428, 503, 725, 776, 1027, 1286
Hpy8I GTNNAC 8 cut(s) 82, 412, 622, 1036, 1382, 1594, 1638, 1899
Hpy99I CGWCG 2 cut(s) 199, 352
HpyAV CCTTC 7 cut(s) 161, 472, 821, 1043, 1146, 1289, 1496
HpyCH4III ACNGT 5 cut(s) 116, 619, 697, 1311, 1471
HpyCH4IV ACGT 3 cut(s) 1378, 1724, 1836
HpyF10VI GCNNNNNNNGC 1 cut(s) 685
HpySE526I ACGT 3 cut(s) 1378, 1724, 1836
Hsp92II CATG 7 cut(s) 98, 431, 728, 851, 977, 1084, 1217
KflI GGGWCCC 1 cut(s) 1462
Kpn2I TCCGGA 2 cut(s) 502, 775
KpnI GGTACC 1 cut(s) 701
Ksp22I TGATCA 1 cut(s) 91
KspAI GTTAAC 1 cut(s) 1899
Kzo9I GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
LguI GCTCTTC 1 cut(s) 231
LmnI GCTCC 2 cut(s) 529, 932
Lsp1109I GCAGC 6 cut(s) 375, 697, 1255, 1542, 1718, 1845
MaeII ACGT 3 cut(s) 1378, 1724, 1836
MaeIII GTNAC 5 cut(s) 386, 899, 986, 1197, 1320
MalI GATC 8 cut(s) 93, 213, 501, 978, 1415, 1626, 1670, 1674
MboI GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
MflI RGATCY 1 cut(s) 1624
MhlI GDGCHC 4 cut(s) 624, 681, 937, 1913
MlsI TGGCCA 2 cut(s) 578, 605
MluNI TGGCCA 2 cut(s) 578, 605
MlyI GAGTC 2 cut(s) 340, 1748
MmeI TCCRAC 1 cut(s) 763
Mox20I TGGCCA 2 cut(s) 578, 605
MroI TCCGGA 2 cut(s) 502, 775
MroXI GAANNNNTTC 4 cut(s) 171, 1020, 1626, 1703
MscI TGGCCA 2 cut(s) 578, 605
MseI TTAA 8 cut(s) 180, 443, 909, 957, 1575, 1727, 1808, 1898
MslI CAYNNNNRTG 1 cut(s) 584
Msp20I TGGCCA 2 cut(s) 578, 605
MspI CCGG 3 cut(s) 503, 776, 948
MspR9I CCNGG 1 cut(s) 319
Mva1269I GAATGC 1 cut(s) 171
MvaI CCWGG 1 cut(s) 319
MwoI GCNNNNNNNGC 1 cut(s) 685
NdeII GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
NlaIII CATG 7 cut(s) 98, 431, 728, 851, 977, 1084, 1217
NlaIV GGNNCC 4 cut(s) 699, 1308, 1463, 1464
NmeAIII GCCGAG 1 cut(s) 459
NmuCI GTSAC 2 cut(s) 986, 1197
NspI RCATGY 1 cut(s) 1084
PaeI GCATGC 1 cut(s) 1084
PaeR7I CTCGAG 1 cut(s) 1736
PagI TCATGA 2 cut(s) 427, 724
PceI AGGCCT 1 cut(s) 317
PciSI GCTCTTC 1 cut(s) 231
PctI GAATGC 1 cut(s) 171
PdmI GAANNNNTTC 4 cut(s) 171, 1020, 1626, 1703
PfeI GAWTC 2 cut(s) 1064, 1178
Pfl23II CGTACG 1 cut(s) 1311
PflMI CCANNNNNTGG 1 cut(s) 494
PkrI GCNGC 7 cut(s) 365, 687, 968, 1245, 1557, 1733, 1860
PleI GAGTC 2 cut(s) 339, 1747
PmaCI CACGTG 1 cut(s) 1837
PmlI CACGTG 1 cut(s) 1837
PpsI GAGTC 2 cut(s) 339, 1747
Ppu21I YACGTR 2 cut(s) 1379, 1837
PpuMI RGGWCCY 1 cut(s) 1462
PshBI ATTAAT 1 cut(s) 909
Psp124BI GAGCTC 1 cut(s) 937
Psp1406I AACGTT 1 cut(s) 1724
Psp5II RGGWCCY 1 cut(s) 1462
Psp6I CCWGG 1 cut(s) 317
PspCI CACGTG 1 cut(s) 1837
PspGI CCWGG 1 cut(s) 317
PspLI CGTACG 1 cut(s) 1311
PspN4I GGNNCC 4 cut(s) 699, 1308, 1463, 1464
PspPI GGNCC 2 cut(s) 1307, 1462
PspPPI RGGWCCY 1 cut(s) 1462
PspXI VCTCGAGB 1 cut(s) 1736
PsuI RGATCY 1 cut(s) 1624
RsaI GTAC 2 cut(s) 699, 1313
RsaNI GTAC 2 cut(s) 698, 1312
RseI CAYNNNNRTG 1 cut(s) 584
SacI GAGCTC 1 cut(s) 937
SapI GCTCTTC 1 cut(s) 231
SaqAI TTAA 8 cut(s) 180, 443, 909, 957, 1575, 1727, 1808, 1898
SatI GCNGC 7 cut(s) 364, 686, 967, 1244, 1556, 1732, 1859
Sau3AI GATC 8 cut(s) 91, 211, 499, 976, 1413, 1624, 1668, 1672
Sau96I GGNCC 2 cut(s) 1307, 1462
SchI GAGTC 2 cut(s) 340, 1748
ScrFI CCNGG 1 cut(s) 319
SduI GDGCHC 4 cut(s) 624, 681, 937, 1913
Sfr274I CTCGAG 1 cut(s) 1736
SinI GGWCC 2 cut(s) 1307, 1462
SlaI CTCGAG 1 cut(s) 1736
SmiMI CAYNNNNRTG 1 cut(s) 584
SmlI CTYRAG 2 cut(s) 1736, 1919
SmoI CTYRAG 2 cut(s) 1736, 1919
SphI GCATGC 1 cut(s) 1084
SseBI AGGCCT 1 cut(s) 317
SsiI CCGC 6 cut(s) 48, 85, 103, 420, 967, 1846
SspI AATATT 1 cut(s) 372
SstI GAGCTC 1 cut(s) 937
StuI AGGCCT 1 cut(s) 317
StyD4I CCNGG 1 cut(s) 317
StyI CCWWGG 1 cut(s) 72
TaaI ACNGT 5 cut(s) 116, 619, 697, 1311, 1471
TaiI ACGT 3 cut(s) 1381, 1727, 1839
TaqI TCGA 7 cut(s) 22, 197, 308, 1001, 1287, 1671, 1737
TaqII GACCGA 1 cut(s) 429
TauI GCSGC 1 cut(s) 969
TfiI GAWTC 2 cut(s) 1064, 1178
Tru1I TTAA 8 cut(s) 180, 443, 909, 957, 1575, 1727, 1808, 1898
Tru9I TTAA 8 cut(s) 180, 443, 909, 957, 1575, 1727, 1808, 1898
TscAI CASTG 2 cut(s) 624, 1476
TseFI GTSAC 2 cut(s) 986, 1197
TseI GCWGC 6 cut(s) 363, 685, 1243, 1555, 1731, 1858
Tsp45I GTSAC 2 cut(s) 986, 1197
TspDTI ATGAA 7 cut(s) 416, 645, 864, 879, 1062, 1712, 1758
TspGWI ACGGA 1 cut(s) 183
TspRI CASTG 2 cut(s) 624, 1476
Van91I CCANNNNNTGG 1 cut(s) 494
VneI GTGCAC 1 cut(s) 620
VpaK11BI GGWCC 2 cut(s) 1307, 1462
VspI ATTAAT 1 cut(s) 909
XapI RAATTY 6 cut(s) 324, 789, 1018, 1432, 1476, 1701
XceI RCATGY 1 cut(s) 1084
XcmI CCANNNNNNNNNTGG 3 cut(s) 40, 159, 1488
XhoI CTCGAG 1 cut(s) 1736
XmiI GTMKAC 2 cut(s) 411, 1381
XmnI GAANNNNTTC 4 cut(s) 171, 1020, 1626, 1703
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.