Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0017299.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

2 .. 637

Gene Structure 636 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0017299.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 636 bp

atggctgaaggtgttgttgttgttgcggctgaagggatcaagaccctcggagacttcatcattcagcaagcgaagttcttgagcggagtcagctatcaagttgagcttgcaaaagttgaactacacttgatccgcggcttcctcagagatgcagatgcaagacaaggagaagaagaggtagtccgcgtttgggttaaactgattagagatgctgcttatgacttggaggatgtcattgaatcttttgccttgaaagtggcttccaggaggagaggaggtactgtgaagattgctctcaaaaggtttgccagcatctttaatgaaggagttaaccgatacaagattgggtccgaaattgaggatattatgaccaaactttctcatttgaggtcgagtttgcaaagttataacatcaggcaaataagtgggggtgatggtgtcggccgtgtcgcttcttcttttaagaggcaactagaccgacggctaacttatgctcatgaagttgaaagtcatattgttggcttagaggaaaacacagatatactagtgaaggagttggtgagagaaggaaagcgtcaccgtgttgtttctatttgggggatgggcggctctggaaaaaccactcttgcaaaacag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

212

Amino Acids

23.65

Weight (kDa)

9.42

Isoelectric Point (pI)

50.05

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	408
AccBSI	CCGCTC	1 cut(s)	84
AccII	CGCG	2 cut(s)	135, 186
AciI	CCGC	6 cut(s)	26, 84, 133, 135, 184, 606
AclWI	GGATC	2 cut(s)	44, 124
AcoI	YGGCCR	1 cut(s)	442
AcuI	CTGAAG	2 cut(s)	27, 51
AfaI	GTAC	1 cut(s)	280
AfiI	CCNNNNNNNGG	1 cut(s)	190
AgsI	TTSAA	4 cut(s)	119, 239, 253, 506
AhlI	ACTAGT	1 cut(s)	544
AjnI	CCWGG	1 cut(s)	263
AluBI	AGCT	2 cut(s)	93, 106
AluI	AGCT	2 cut(s)	93, 106
Alw26I	GTCTC	1 cut(s)	45
AlwI	GGATC	2 cut(s)	44, 124
AoxI	GGCC	1 cut(s)	442
ApeKI	GCWGC	1 cut(s)	212
AspS9I	GGNCC	1 cut(s)	348
AsuHPI	GGTGA	3 cut(s)	443, 569, 571
AvaII	GGWCC	1 cut(s)	348
BbvI	GCAGC	1 cut(s)	199
BccI	CCATC	2 cut(s)	428, 595
BceAI	ACGGC	2 cut(s)	429, 497
BciT130I	CCWGG	1 cut(s)	265
BcoDI	GTCTC	1 cut(s)	45
BcuI	ACTAGT	1 cut(s)	544
BfaI	CTAG	2 cut(s)	473, 545
BisI	GCNGC	4 cut(s)	27, 136, 213, 607
BlsI	GCNGC	4 cut(s)	28, 137, 214, 608
Bme1390I	CCNGG	1 cut(s)	265
Bme18I	GGWCC	1 cut(s)	348
BmgT120I	GGNCC	1 cut(s)	348
BmiI	GGNNCC	1 cut(s)	349
BmrFI	CCNGG	1 cut(s)	265
BmsI	GCATC	4 cut(s)	139, 145, 199, 321
BpuEI	CTTGAG	1 cut(s)	100
BsaJI	CCNNGG	2 cut(s)	46, 133
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 267, 292, 297
Bsc4I	CCNNNNNNNGG	1 cut(s)	190
BseBI	CCWGG	1 cut(s)	265
BseDI	CCNNGG	2 cut(s)	46, 133
BseGI	GGATG	2 cut(s)	235, 606
BseLI	CCNNNNNNNGG	1 cut(s)	190
BseMII	CTCAG	1 cut(s)	157
BseRI	GAGGAG	2 cut(s)	283, 288
BseX3I	CGGCCG	1 cut(s)	442
BseXI	GCAGC	1 cut(s)	199
Bsh1236I	CGCG	2 cut(s)	135, 186
Bsh1285I	CGRYCG	1 cut(s)	445
BshFI	GGCC	1 cut(s)	444
BsiEI	CGRYCG	1 cut(s)	445
BslI	CCNNNNNNNGG	1 cut(s)	190
BsmAI	GTCTC	1 cut(s)	45
BsnI	GGCC	1 cut(s)	444
Bsp143I	GATC	2 cut(s)	36, 129
BspACI	CCGC	6 cut(s)	26, 84, 133, 135, 184, 606
BspANI	GGCC	1 cut(s)	444
BspCNI	CTCAG	1 cut(s)	156
BspFNI	CGCG	2 cut(s)	135, 186
BspHI	TCATGA	1 cut(s)	496
BspLI	GGNNCC	1 cut(s)	349
BspPI	GGATC	2 cut(s)	44, 124
BsrBI	CCGCTC	1 cut(s)	84
BssECI	CCNNGG	2 cut(s)	46, 133
BssMI	GATC	2 cut(s)	36, 129
Bst2UI	CCWGG	1 cut(s)	265
Bst4CI	ACNGT	2 cut(s)	283, 581
Bst6I	CTCTTC	1 cut(s)	168
BstC8I	GCNNGC	3 cut(s)	69, 108, 310
BstDEI	CTNAG	2 cut(s)	143, 523
BstDSI	CCRYGG	1 cut(s)	133
BstF5I	GGATG	2 cut(s)	235, 606
BstFNI	CGCG	2 cut(s)	135, 186
BstKTI	GATC	2 cut(s)	39, 132
BstMAI	GTCTC	1 cut(s)	45
BstMBI	GATC	2 cut(s)	36, 129
BstMCI	CGRYCG	1 cut(s)	445
BstMWI	GCNNNNNNNGC	1 cut(s)	90
BstNI	CCWGG	1 cut(s)	265
BstSCI	CCNGG	1 cut(s)	263
BstUI	CGCG	2 cut(s)	135, 186
BstV1I	GCAGC	1 cut(s)	199
BstZI	CGGCCG	1 cut(s)	442
BsuRI	GGCC	1 cut(s)	444
BtgI	CCRYGG	1 cut(s)	133
BtsCI	GGATG	2 cut(s)	235, 606
Cac8I	GCNNGC	3 cut(s)	69, 108, 310
CciI	TCATGA	1 cut(s)	496
Cfr13I	GGNCC	1 cut(s)	348
Cfr42I	CCGCGG	1 cut(s)	136
CseI	GACGC	1 cut(s)	563
Csp6I	GTAC	1 cut(s)	279
CviAII	CATG	1 cut(s)	497
CviQI	GTAC	1 cut(s)	279
DdeI	CTNAG	2 cut(s)	143, 523
DpnI	GATC	2 cut(s)	38, 131
DpnII	GATC	2 cut(s)	36, 129
EaeI	YGGCCR	1 cut(s)	442
EagI	CGGCCG	1 cut(s)	442
Eam1104I	CTCTTC	1 cut(s)	168
EarI	CTCTTC	1 cut(s)	168
EclXI	CGGCCG	1 cut(s)	442
Eco47I	GGWCC	1 cut(s)	348
Eco52I	CGGCCG	1 cut(s)	442
Eco57I	CTGAAG	2 cut(s)	27, 51
EcoRII	CCWGG	1 cut(s)	263
FaeI	CATG	1 cut(s)	500
FaiI	YATR	7 cut(s)	219, 368, 408, 492, 498, 513, 542
FalI	AAGNNNNNCTT	2 cut(s)	90, 122
FatI	CATG	1 cut(s)	496
Fnu4HI	GCNGC	4 cut(s)	27, 136, 213, 607
FokI	GGATG	2 cut(s)	242, 613
Fsp4HI	GCNGC	4 cut(s)	27, 136, 213, 607
FspBI	CTAG	2 cut(s)	473, 545
GluI	GCNGC	4 cut(s)	27, 136, 213, 607
HaeIII	GGCC	1 cut(s)	444
HgaI	GACGC	1 cut(s)	563
Hin1II	CATG	1 cut(s)	500
HincII	GTYRAC	1 cut(s)	331
HindII	GTYRAC	1 cut(s)	331
HinfI	GANTC	2 cut(s)	87, 239
HpaI	GTTAAC	1 cut(s)	331
HphI	GGTGA	3 cut(s)	443, 569, 571
Hpy166II	GTNNAC	1 cut(s)	331
Hpy188I	TCNGA	3 cut(s)	50, 146, 352
Hpy188III	TCNNGA	4 cut(s)	40, 79, 497, 612
Hpy8I	GTNNAC	1 cut(s)	331
Hpy99I	CGWCG	1 cut(s)	483
HpyAV	CCTTC	4 cut(s)	26, 317, 544, 560
HpyCH4III	ACNGT	2 cut(s)	283, 581
HpyCH4V	TGCA	5 cut(s)	110, 152, 158, 400, 629
HpyF10VI	GCNNNNNNNGC	1 cut(s)	90
HpyF3I	CTNAG	2 cut(s)	143, 523
Hsp92II	CATG	1 cut(s)	500
KspAI	GTTAAC	1 cut(s)	331
KspI	CCGCGG	1 cut(s)	136
Kzo9I	GATC	2 cut(s)	36, 129
LpnPI	CCDG	5 cut(s)	250, 277, 322, 400, 597
Lsp1109I	GCAGC	1 cut(s)	199
LweI	GCATC	4 cut(s)	139, 145, 199, 321
MaeI	CTAG	2 cut(s)	473, 545
MaeIII	GTNAC	1 cut(s)	575
MalI	GATC	2 cut(s)	38, 131
MbiI	CCGCTC	1 cut(s)	84
MboI	GATC	2 cut(s)	36, 129
MboII	GAAGA	4 cut(s)	182, 185, 298, 447
MluCI	AATT	1 cut(s)	354
MlyI	GAGTC	1 cut(s)	96
MseI	TTAA	4 cut(s)	195, 318, 330, 462
MspA1I	CMGCKG	1 cut(s)	135
MspR9I	CCNGG	1 cut(s)	265
MvaI	CCWGG	1 cut(s)	265
MvnI	CGCG	2 cut(s)	135, 186
MwoI	GCNNNNNNNGC	1 cut(s)	90
NdeII	GATC	2 cut(s)	36, 129
NlaIII	CATG	1 cut(s)	500
NlaIV	GGNNCC	1 cut(s)	349
NmuCI	GTSAC	1 cut(s)	575
PagI	TCATGA	1 cut(s)	496
PfeI	GAWTC	1 cut(s)	239
PfoI	TCCNGGA	1 cut(s)	263
PkrI	GCNGC	4 cut(s)	28, 137, 214, 608
PleI	GAGTC	1 cut(s)	95
PpsI	GAGTC	1 cut(s)	95
PsiI	TTATAA	1 cut(s)	408
Psp6I	CCWGG	1 cut(s)	263
PspGI	CCWGG	1 cut(s)	263
PspN4I	GGNNCC	1 cut(s)	349
PspPI	GGNCC	1 cut(s)	348
RsaI	GTAC	1 cut(s)	280
RsaNI	GTAC	1 cut(s)	279
SacII	CCGCGG	1 cut(s)	136
SaqAI	TTAA	4 cut(s)	195, 318, 330, 462
SatI	GCNGC	4 cut(s)	27, 136, 213, 607
Sau3AI	GATC	2 cut(s)	36, 129
Sau96I	GGNCC	1 cut(s)	348
SchI	GAGTC	1 cut(s)	96
ScrFI	CCNGG	1 cut(s)	265
SetI	ASST	7 cut(s)	13, 95, 108, 180, 280, 305, 392
SfaNI	GCATC	4 cut(s)	139, 145, 199, 321
Sfr303I	CCGCGG	1 cut(s)	136
SgrBI	CCGCGG	1 cut(s)	136
SinI	GGWCC	1 cut(s)	348
SmlI	CTYRAG	1 cut(s)	79
SmoI	CTYRAG	1 cut(s)	79
SpeI	ACTAGT	1 cut(s)	544
Sse9I	AATT	1 cut(s)	354
SsiI	CCGC	6 cut(s)	26, 84, 133, 135, 184, 606
SspMI	CTAG	2 cut(s)	473, 545
StyD4I	CCNGG	1 cut(s)	263
TaaI	ACNGT	2 cut(s)	283, 581
TaqI	TCGA	1 cut(s)	392
TaqII	GACCGA	1 cut(s)	492
TasI	AATT	1 cut(s)	354
TauI	GCSGC	3 cut(s)	29, 138, 609
TfiI	GAWTC	1 cut(s)	239
Tru1I	TTAA	4 cut(s)	195, 318, 330, 462
Tru9I	TTAA	4 cut(s)	195, 318, 330, 462
TseFI	GTSAC	1 cut(s)	575
TseI	GCWGC	1 cut(s)	212
Tsp45I	GTSAC	1 cut(s)	575
TspDTI	ATGAA	3 cut(s)	46, 336, 513
VpaK11BI	GGWCC	1 cut(s)	348
XspI	CTAG	2 cut(s)	473, 545

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.