Prupe.1G043600_v2.0.a1

disease resistance

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Reverse (-)
3129684 .. 3130772
1089 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G043600.1

Sequence Viewer

Length: 1089 bp
ATGGCTGAGGCAGTTGTTTCCTTTGTGCTCGAAAGTGTCGGAGATTTCACCATTCAGGAAGCCAAGTTCTTGTCTGGAGTCAGTCATCAAGTTGAGGTTGCACAAACTGAGCTACAACTGATGCAGGGCTTCCTGAAAGATGCAGATGCAAGACAAGGACAAGATGCAACAGTCCACATTTGGGTTGCCAAGATTAAAGATGCTGCTTATGATTTGGAAGATGTTATTCAAACTTATGGCTTCAAAGTGGCTTCCAAGCAGAAAAGCGGTGTAAAGAATGTTTTGAGAAGATTTGCCTGCATCTTCAAGGAAGGGGTTGAGCTTCACAAGATCGGAGCAAAAATTGAGAACATCACTTCTAAAATTTCTAATTTGAGGTCGAGTTTGCAGAGTTATAACATAAAAGAAATAAGGGAGAGTGGTGGTGAATCTTCCCTTCAATTGCATGAGAGGCAACAACTGCTGAGGCGAAGTTATTCTCATGTCGTTGAACGTGATGTTGTTGGGTTAGAGTCCAACGTCGAAGAATTGGTTATGCATTTAGTGAAAGATGAAAATCGTCATCAAGTTGTATCTATTTGGGGGATGGGCGGTTTAGGGAAGACCACTCTTGCAAAACAAGTTTATCATAACAAAAAAGTTGGGCACCATTTTGATAGTTTTGCTTGGGTGGGTGTATCTCAAAGGTGCCAAATAAGAAATGTTTGGGAAGGAATTTTATTTAAACTCATTTCTGCTACCAAGGAACAAAAACAAGAAATTAAGGAGATGACATATGATGAAATTACAAAGAAGCTTTTTCGTGTCATGGAAGAAACAAGATGTTTAGTGATCCTTGATGACATTTGGAGTCTAGAGACGTGGAATCTTTTGAAAGTTGCATTTCCAAATGAGAAAACTGAGAGCACAATATTACTCACAACACGTTATCAAGCAGCTGCTTTGCCCCCAAATAGAAATTGTTTTCTCCACAAGCTCCAGCCACTAAATGAGAATGCGAATTTGGAACTATTTGAGAAGATAGCAATATTTGGAAGGGCTGATATCGGTATTTTCTCACCCTTAATCTGTCATTTTTCAAGTTCTTAG

Protein Analysis

363

Amino Acids

41.19

Weight (kDa)

7.2

Isoelectric Point (pI)

48.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 396
AccB1I GGYRCC 2 cut(s) 645, 687
AciI CCGC 2 cut(s) 267, 591
AclWI GGATC 1 cut(s) 826
AcsI RAATTY 3 cut(s) 363, 714, 1000
AfiI CCNNNNNNNGG 1 cut(s) 181
AflIII ACRYGT 1 cut(s) 923
AgsI TTSAA 7 cut(s) 230, 244, 307, 440, 491, 874, 1080
AjiI CACGTC 1 cut(s) 861
AjuI GAANNNNNNNTTGG 2 cut(s) 986, 1018
AloI GAACNNNNNNTCC 2 cut(s) 50, 82
AluBI AGCT 5 cut(s) 112, 322, 796, 938, 976
AluI AGCT 5 cut(s) 112, 322, 796, 938, 976
Alw21I GWGCWC 2 cut(s) 30, 908
Alw26I GTCTC 1 cut(s) 851
AlwI GGATC 1 cut(s) 826
ApeKI GCWGC 3 cut(s) 203, 935, 938
ApoI RAATTY 3 cut(s) 363, 714, 1000
Asp700I GAANNNNTTC 1 cut(s) 475
AsuHPI GGTGA 3 cut(s) 40, 437, 1050
BaeGI GKGCMC 1 cut(s) 648
BanI GGYRCC 2 cut(s) 645, 687
BbsI GAAGAC 1 cut(s) 608
Bbv12I GWGCWC 2 cut(s) 30, 908
BbvCI CCTCAGC 2 cut(s) 6, 464
BbvI GCAGC 3 cut(s) 190, 925, 947
BccI CCATC 1 cut(s) 580
BcoDI GTCTC 1 cut(s) 851
BfaI CTAG 1 cut(s) 854
BisI GCNGC 3 cut(s) 204, 936, 939
BlsI GCNGC 3 cut(s) 205, 937, 940
BmgBI CACGTC 1 cut(s) 861
BmiI GGNNCC 2 cut(s) 647, 689
BmsI GCATC 6 cut(s) 111, 130, 136, 154, 190, 309
BpiI GAAGAC 1 cut(s) 608
BpmI CTGGAG 2 cut(s) 96, 962
Bpu10I CCTNAGC 2 cut(s) 6, 464
BsaBI GATNNNNATC 1 cut(s) 555
BsaJI CCNNGG 1 cut(s) 741
Bsc4I CCNNNNNNNGG 1 cut(s) 181
Bse8I GATNNNNATC 1 cut(s) 555
BseDI CCNNGG 1 cut(s) 741
BseGI GGATG 1 cut(s) 591
BseJI GATNNNNATC 1 cut(s) 555
BseLI CCNNNNNNNGG 1 cut(s) 181
BseMII CTCAG 3 cut(s) 99, 455, 891
BseSI GKGCMC 1 cut(s) 648
BseXI GCAGC 3 cut(s) 190, 925, 947
BshNI GGYRCC 2 cut(s) 645, 687
BsiHKAI GWGCWC 2 cut(s) 30, 908
BslI CCNNNNNNNGG 1 cut(s) 181
BsmAI GTCTC 1 cut(s) 851
BsmBI CGTCTC 1 cut(s) 851
BsmI GAATGC 1 cut(s) 1000
Bsp1286I GDGCHC 3 cut(s) 30, 648, 908
Bsp143I GATC 2 cut(s) 330, 831
BspACI CCGC 2 cut(s) 267, 591
BspCNI CTCAG 3 cut(s) 100, 456, 892
BspLI GGNNCC 2 cut(s) 647, 689
BspPI GGATC 1 cut(s) 826
BspT107I GGYRCC 2 cut(s) 645, 687
BssECI CCNNGG 1 cut(s) 741
BssMI GATC 2 cut(s) 330, 831
BssT1I CCWWGG 1 cut(s) 741
Bst4CI ACNGT 1 cut(s) 172
BstAPI GCANNNNNTGC 1 cut(s) 460
BstC8I GCNNGC 1 cut(s) 298
BstDEI CTNAG 5 cut(s) 6, 108, 464, 900, 1086
BstF5I GGATG 1 cut(s) 591
BstKTI GATC 2 cut(s) 333, 834
BstMAI GTCTC 1 cut(s) 851
BstMBI GATC 2 cut(s) 330, 831
BstMWI GCNNNNNNNGC 2 cut(s) 451, 460
BstSLI GKGCMC 1 cut(s) 648
BstV1I GCAGC 3 cut(s) 190, 925, 947
BstV2I GAAGAC 1 cut(s) 608
BtrI CACGTC 1 cut(s) 861
BtsCI GGATG 1 cut(s) 591
Cac8I GCNNGC 1 cut(s) 298
CviAII CATG 3 cut(s) 446, 482, 808
DdeI CTNAG 5 cut(s) 6, 108, 464, 900, 1086
DpnI GATC 2 cut(s) 332, 833
DpnII GATC 2 cut(s) 330, 831
DraI TTTAAA 1 cut(s) 724
Eco130I CCWWGG 1 cut(s) 741
Eco32I GATATC 1 cut(s) 1045
EcoRV GATATC 1 cut(s) 1045
EcoT14I CCWWGG 1 cut(s) 741
EcoT22I ATGCAT 1 cut(s) 540
ErhI CCWWGG 1 cut(s) 741
Esp3I CGTCTC 1 cut(s) 851
FaeI CATG 3 cut(s) 449, 485, 811
FatI CATG 3 cut(s) 445, 481, 807
FauNDI CATATG 1 cut(s) 775
Fnu4HI GCNGC 3 cut(s) 204, 936, 939
FokI GGATG 1 cut(s) 598
Fsp4HI GCNGC 3 cut(s) 204, 936, 939
FspBI CTAG 1 cut(s) 854
GluI GCNGC 3 cut(s) 204, 936, 939
GsuI CTGGAG 2 cut(s) 96, 962
Hin1II CATG 3 cut(s) 449, 485, 811
HindIII AAGCTT 1 cut(s) 794
HinfI GANTC 5 cut(s) 78, 428, 512, 850, 865
HphI GGTGA 3 cut(s) 40, 437, 1050
Hpy166II GTNNAC 1 cut(s) 175
Hpy188I TCNGA 2 cut(s) 41, 335
Hpy188III TCNNGA 4 cut(s) 56, 75, 133, 854
Hpy8I GTNNAC 1 cut(s) 175
Hpy99I CGWCG 1 cut(s) 524
HpyAV CCTTC 4 cut(s) 305, 446, 704, 1029
HpyCH4III ACNGT 1 cut(s) 172
HpyCH4IV ACGT 4 cut(s) 493, 519, 860, 925
HpyF10VI GCNNNNNNNGC 2 cut(s) 451, 460
HpyF3I CTNAG 5 cut(s) 6, 108, 464, 900, 1086
HpySE526I ACGT 4 cut(s) 493, 519, 860, 925
Hsp92II CATG 3 cut(s) 449, 485, 811
Kzo9I GATC 2 cut(s) 330, 831
LmnI GCTCC 2 cut(s) 335, 981
LpnPI CCDG 6 cut(s) 41, 60, 110, 146, 310, 992
Lsp1109I GCAGC 3 cut(s) 190, 925, 947
LweI GCATC 6 cut(s) 111, 130, 136, 154, 190, 309
MaeI CTAG 1 cut(s) 854
MaeII ACGT 4 cut(s) 493, 519, 860, 925
MalI GATC 2 cut(s) 332, 833
MboI GATC 2 cut(s) 330, 831
MboII GAAGA 8 cut(s) 230, 295, 300, 423, 536, 613, 824, 1030
MfeI CAATTG 1 cut(s) 440
MhlI GDGCHC 3 cut(s) 30, 648, 908
MlyI GAGTC 3 cut(s) 87, 521, 859
MmeI TCCRAC 2 cut(s) 19, 540
MnlI CCTC 4 cut(s) 88, 369, 444, 459
Mph1103I ATGCAT 1 cut(s) 540
MroXI GAANNNNTTC 1 cut(s) 475
MseI TTAA 4 cut(s) 195, 723, 762, 1064
MspA1I CMGCKG 1 cut(s) 938
MunI CAATTG 1 cut(s) 440
Mva1269I GAATGC 1 cut(s) 1000
MwoI GCNNNNNNNGC 2 cut(s) 451, 460
NdeI CATATG 1 cut(s) 775
NdeII GATC 2 cut(s) 330, 831
NlaIII CATG 3 cut(s) 449, 485, 811
NlaIV GGNNCC 2 cut(s) 647, 689
NsiI ATGCAT 1 cut(s) 540
PctI GAATGC 1 cut(s) 1000
PdmI GAANNNNTTC 1 cut(s) 475
PfeI GAWTC 2 cut(s) 428, 865
PkrI GCNGC 3 cut(s) 205, 937, 940
PleI GAGTC 3 cut(s) 86, 520, 858
PpsI GAGTC 3 cut(s) 86, 520, 858
PsiI TTATAA 1 cut(s) 396
PspN4I GGNNCC 2 cut(s) 647, 689
PvuII CAGCTG 1 cut(s) 938
SaqAI TTAA 4 cut(s) 195, 723, 762, 1064
SatI GCNGC 3 cut(s) 204, 936, 939
Sau3AI GATC 2 cut(s) 330, 831
SchI GAGTC 3 cut(s) 87, 521, 859
SduI GDGCHC 3 cut(s) 30, 648, 908
SfaNI GCATC 6 cut(s) 111, 130, 136, 154, 190, 309
SsiI CCGC 2 cut(s) 267, 591
SspI AATATT 2 cut(s) 912, 1029
SspMI CTAG 1 cut(s) 854
StyI CCWWGG 1 cut(s) 741
TaaI ACNGT 1 cut(s) 172
TaiI ACGT 4 cut(s) 496, 522, 863, 928
TaqI TCGA 3 cut(s) 30, 380, 522
TfiI GAWTC 2 cut(s) 428, 865
Tru1I TTAA 4 cut(s) 195, 723, 762, 1064
Tru9I TTAA 4 cut(s) 195, 723, 762, 1064
TseI GCWGC 3 cut(s) 203, 935, 938
TspDTI ATGAA 2 cut(s) 567, 795
XapI RAATTY 3 cut(s) 363, 714, 1000
XbaI TCTAGA 1 cut(s) 853
XmnI GAANNNNTTC 1 cut(s) 475
XspI CTAG 1 cut(s) 854
Zsp2I ATGCAT 1 cut(s) 540
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.