Rmu_co8366955.1_g000001

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_co8366955.1
Physical Location & Seq
Forward (+)
1 .. 1105
1105 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_co8366955.1_g000001.1.cds

Sequence Viewer

Length: 696 bp
ctctactcgtaacaacatctcaccaatcagaactaccaaagaactctattgcatttgtctcacttttggcaaagagagtatggctgaggcggtagtttcctttgtggttgaaaggctgggagacttcatcatccaacaaggaaagttcttgtatggagtcagcgaccaagttgagcttgcacaaactgagctacaattaatgaatggtttcctcaaagatgctgatgcaagacaaagtgatgatgaaactgttcgtatctgggttgcaaaaatcagagaggctgcttatgatttggaagatgtcattgaaatctatgccttgaaagtggcttgcaagagggagggaggtattaagagtgtgctgaagaggtttggttgcatgttgaaggaaggagttgatctccacaagattggggcgaaaatccgagtcaccaccaccaatatttctgatctgaggttgtgtttgcaaacttacaacattagagaactaagggagagtactgaaggtgtcacttctgtgtatgagaggcagcaacaactcaggcgaacttattctcatataattgatcgtgatgttgttgggttggaggagagcatgagagaattggctgtgagtttggttaagagtggagacagacaccgagttgtttctatttgtgggatgggggggttggggaaaacaactcttgcaaaaca

Protein Analysis

231

Amino Acids

26.03

Weight (kDa)

8.16

Isoelectric Point (pI)

45.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 90
AcuI CTGAAG 2 cut(s) 384, 523
AfaI GTAC 1 cut(s) 500
AgsI TTSAA 4 cut(s) 111, 309, 323, 386
AleI CACNNNNGTG 1 cut(s) 516
AluBI AGCT 2 cut(s) 176, 191
AluI AGCT 2 cut(s) 176, 191
Alw26I GTCTC 3 cut(s) 63, 115, 625
ApeKI GCWGC 2 cut(s) 282, 530
AseI ATTAAT 1 cut(s) 198
Asp700I GAANNNNTTC 3 cut(s) 207, 250, 551
AsuHPI GGTGA 2 cut(s) 13, 422
BbvCI CCTCAGC 1 cut(s) 85
BbvI GCAGC 2 cut(s) 269, 542
BccI CCATC 1 cut(s) 656
BcoDI GTCTC 3 cut(s) 63, 115, 625
BisI GCNGC 2 cut(s) 283, 531
BlsI GCNGC 2 cut(s) 284, 532
BmcAI AGTACT 1 cut(s) 500
BmsI GCATC 2 cut(s) 209, 215
BplI GAGNNNNNCTC 2 cut(s) 385, 417
Bpu10I CCTNAGC 1 cut(s) 85
BseGI GGATG 2 cut(s) 130, 667
BseMII CTCAG 4 cut(s) 76, 178, 444, 554
BseRI GAGGAG 1 cut(s) 603
BseXI GCAGC 2 cut(s) 269, 542
BseYI CCCAGC 1 cut(s) 116
BsmAI GTCTC 3 cut(s) 63, 115, 625
Bsp143I GATC 3 cut(s) 398, 449, 566
BspACI CCGC 1 cut(s) 90
BspCNI CTCAG 4 cut(s) 77, 179, 445, 553
BssMI GATC 3 cut(s) 398, 449, 566
Bst4CI ACNGT 1 cut(s) 251
Bst6I CTCTTC 1 cut(s) 360
BstC8I GCNNGC 2 cut(s) 178, 332
BstDEI CTNAG 5 cut(s) 85, 187, 453, 489, 540
BstF5I GGATG 2 cut(s) 130, 667
BstKTI GATC 3 cut(s) 401, 452, 569
BstMAI GTCTC 3 cut(s) 63, 115, 625
BstMBI GATC 3 cut(s) 398, 449, 566
BstNSI RCATGY 1 cut(s) 383
BstV1I GCAGC 2 cut(s) 269, 542
BstXI CCANNNNNNTGG 1 cut(s) 411
BtsCI GGATG 2 cut(s) 130, 667
Cac8I GCNNGC 2 cut(s) 178, 332
Csp6I GTAC 1 cut(s) 499
CviAII CATG 2 cut(s) 380, 596
CviJI RGCY 7 cut(s) 84, 116, 176, 191, 282, 330, 609
CviKI_1 RGCY 7 cut(s) 84, 116, 176, 191, 282, 330, 609
CviQI GTAC 1 cut(s) 499
DdeI CTNAG 5 cut(s) 85, 187, 453, 489, 540
DpnI GATC 3 cut(s) 400, 451, 568
DpnII GATC 3 cut(s) 398, 449, 566
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
Eco57I CTGAAG 2 cut(s) 384, 523
FaeI CATG 2 cut(s) 383, 599
FaiI YATR 9 cut(s) 81, 154, 289, 316, 381, 523, 559, 561, 597
FalI AAGNNNNNCTT 2 cut(s) 160, 192
FatI CATG 2 cut(s) 379, 595
Fnu4HI GCNGC 2 cut(s) 283, 531
FokI GGATG 2 cut(s) 117, 674
Fsp4HI GCNGC 2 cut(s) 283, 531
GluI GCNGC 2 cut(s) 283, 531
GsaI CCCAGC 1 cut(s) 120
Hin1II CATG 2 cut(s) 383, 599
HinfI GANTC 2 cut(s) 157, 427
HphI GGTGA 2 cut(s) 13, 422
Hpy188I TCNGA 5 cut(s) 30, 276, 426, 449, 454
Hpy188III TCNNGA 1 cut(s) 570
HpyAV CCTTC 3 cut(s) 380, 384, 498
HpyCH4III ACNGT 1 cut(s) 251
HpyCH4V TGCA 8 cut(s) 52, 180, 228, 267, 334, 379, 467, 690
HpyF3I CTNAG 5 cut(s) 85, 187, 453, 489, 540
Hsp92II CATG 2 cut(s) 383, 599
Kzo9I GATC 3 cut(s) 398, 449, 566
LpnPI CCDG 3 cut(s) 102, 245, 527
Lsp1109I GCAGC 2 cut(s) 269, 542
LweI GCATC 2 cut(s) 209, 215
MaeIII GTNAC 3 cut(s) 9, 428, 509
MalI GATC 3 cut(s) 400, 451, 568
MboI GATC 3 cut(s) 398, 449, 566
MboII GAAGA 2 cut(s) 309, 377
MluCI AATT 3 cut(s) 195, 562, 603
MlyI GAGTC 2 cut(s) 166, 436
MmeI TCCRAC 2 cut(s) 158, 565
MroXI GAANNNNTTC 3 cut(s) 207, 250, 551
MseI TTAA 3 cut(s) 198, 352, 622
MslI CAYNNNNRTG 1 cut(s) 516
NdeII GATC 3 cut(s) 398, 449, 566
NlaIII CATG 2 cut(s) 383, 599
NmuCI GTSAC 2 cut(s) 428, 509
NspI RCATGY 1 cut(s) 383
OliI CACNNNNGTG 1 cut(s) 516
PdmI GAANNNNTTC 3 cut(s) 207, 250, 551
PkrI GCNGC 2 cut(s) 284, 532
PleI GAGTC 2 cut(s) 165, 435
PpsI GAGTC 2 cut(s) 165, 435
PshBI ATTAAT 1 cut(s) 198
PspFI CCCAGC 1 cut(s) 116
RsaI GTAC 1 cut(s) 500
RsaNI GTAC 1 cut(s) 499
RseI CAYNNNNRTG 1 cut(s) 516
SaqAI TTAA 3 cut(s) 198, 352, 622
SatI GCNGC 2 cut(s) 283, 531
Sau3AI GATC 3 cut(s) 398, 449, 566
ScaI AGTACT 1 cut(s) 500
SchI GAGTC 2 cut(s) 166, 436
SetI ASST 6 cut(s) 178, 193, 350, 372, 459, 509
SfaNI GCATC 2 cut(s) 209, 215
SmiMI CAYNNNNRTG 1 cut(s) 516
Sse9I AATT 3 cut(s) 195, 562, 603
SsiI CCGC 1 cut(s) 90
SspI AATATT 1 cut(s) 443
TaaI ACNGT 1 cut(s) 251
TasI AATT 3 cut(s) 195, 562, 603
TatI WGTACW 1 cut(s) 498
Tru1I TTAA 3 cut(s) 198, 352, 622
Tru9I TTAA 3 cut(s) 198, 352, 622
TseFI GTSAC 2 cut(s) 428, 509
TseI GCWGC 2 cut(s) 282, 530
Tsp45I GTSAC 2 cut(s) 428, 509
TspDTI ATGAA 3 cut(s) 116, 216, 259
VspI ATTAAT 1 cut(s) 198
XceI RCATGY 1 cut(s) 383
XmnI GAANNNNTTC 3 cut(s) 207, 250, 551
ZrmI AGTACT 1 cut(s) 500
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.