RchiOBHm_Chr1g0345911

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
38105416 .. 38108629
3214 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57220

Sequence Viewer

Length: 2889 bp
ATGGCTGAAGGTGTTGTTATTGTTGCGGCTGAAGGGATCAAGACCCTCGGAGACTTCATCATTCAGCAATCAAAGTTCTTGAGTGGAGTCAGCTATCAAGTTGAGCTTGCAAAAGTTGAACTGCACTTGATCCGCGGCTTCCTCAGAGATGCAGATGCAAGACAAGGAGAAGAAGAGGTAGTCCGCATTTGGGTTAAACTGATTAGAGATGCTGCTTATGACTTGGAGGATGTCATTGAATCTTTTGCCTTGAAAGTAGCTTCTAGGAGGAGAGGAGGTACTGTGAAGATTGTTCTCAAAAGGTTTGCAAGCATCTTTAATGAAGGAGTTAATCCATACAAGATTGGGTCCGAAATTGAGGATATTATGACCAAACTTTCTCATCTGAGGTCGAGTTTGCAAAGTTATAACATCAGGCAAATAAGTGGGGAGGAAAACACAGATATACTGGTGAAGGAGTTGGTAAGAGAAGGAAAGCGTCACCGTGTTATTTCTATTTGGGGGATGGGCGGCTCTGGAAAAACCACTCTTGCAAAACAGGTTTTTCTTCAAGATGAAGTTAAGCGCCATTTTGATTGTTTTGCTTGGGTCTGTATATCTCAACAATGGGAAGGAAAGGATGTATTGGAAGATATTATAATTAAACTCACTTCCCCAACAGCAGAAAAAAGGAAAGAAATTTCCAAAATGAAAAAGGATGAAATAGCAAGGGAGGTCTGTAGTATCCAACGAGAAAAGAGATGTCTGGTGGTCCTTGATGACATATGGACTCAAGAGGCTTGGCATTCAATAAAATCTGGATTCCCAATCAATGAGGAAACAGAGAGCCGGATATTACTCACTACTCGCAAAAAAGAAGTTGCTTTGCTTGCTTCCAAAAATGATCATCTCCACCAACCTCAACCATTAGATGACAACCAGAGCTGGGAACTGTTTGAAAAGATAGCGATGTGTGGAAGCGACAAAACAGACTTGGAAATTTATGCAAAGAAAAGGGAATTAGGAAAGAAGATGCTTGTACATTGTTCAGGTTTACCATTAGCCATCAATGTGCTTGCTGGTCTTCTTAGTAGACGAGAGACGATTGATGAGTGGGACACGGTACTTAGAAATGTTGATGTATACATAATGAGAGGCATAAATGTCCTTGAAAGAGAAAAGACAGGTCAGGAGTGTGGTGTTTCAGGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTAAAACTATGCTTTTTGTATTTAGCCCAATTTCCTGAGGATCATGAGATACGGGTAAAAAGACTTAGTCAATTATGGATTGCAGAAGGGTTTATAACTTCAACGTCAGAAATGCATGTTTCAGTTGAAATTTTGGAAGAATTGTCATATAGTTGCCTAGTTGAATTAGTGGAAAGATCTATGGTTCAAGTTGTAGAATATGGCTTAAGTGGGAAGGTGAAAACTTGCCGTCTCCATGATTTTATGCGAGACTTGTGCTTGCAAAAGGCAGAAGAGGAGAATTTTCTCCGAATTATTAACTTTTCTACGGGACTAGTATCTAAGACACCACTAATTGGCAAGGTTCGAAGACTTGCCCTCCATTTGGATGAAAATGTTAAATATGATTTTAGTATAGATGGAAGAGATGAGCACATTAGGTCTCTATTATACTTTACCCCAAAGGGGTTTGACCAAAAGTGGAAGAAAAAAGTAATGCGATCGATATTCAATGACTTCAAATTGCTTAGAGTTCTGAAGTTTGAAAATATAGAGAGAGAATTTCAGTTACCGAAAACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTGAAGCATAGTGCATACAGTGGGTTACCATCATCTGTTTCTAAGCTGGTACTTTTGCAAACTGTAGATCTGCGGTATAATTATTATTTATATGAAGGATCTTGTTTTGGTCGGGAGAGGGCGACCAGAATCAGAAATGTGTTTTGGAATATGGAGCAACTGAGGCATTTATATTTACCTTGGCGTCACTATATAAGTGAACAGAAACTCTCATTTGCAAGACTTTGCAATTTGCAGACGTTGGGTGATCTTCCAATTGAGAAATGTGATTTGAATGATCTTGTTCAGTTAACCAATCTGAAGAAAATATCCGTAATTGTATCACGGCCTAGTCACTTGGAAAAGTTCAAGAACATGTTGATATCAAGAAGTATAACATATGAGCGTCTTCAATCGCTATCTTTGAAGCTAAACCGAGATGATAATGAGGATATAGCAAGAGATATAGTATTAAGGTGTCCTCATATATACAAGCTGCGACTGCTTGGGAAAATGACTAAATTTCCAGAAGAGCTGCTGGGCTATCCAAACCTCACCAAGATAACGTTGGTTAGTACAGAACTGAGATGTGACCAGATAGAAATAGTGAAGATGCTGCCCAAGTTAAGGGTGCTTTACCTAGGTAGTAATGCTTTCAAATCAAAAACAATGGTTTTCTCCCCAGGAGGCTTTCCTCATCTGGAATTTCTTACCCTTAGTGCTTTGTTTATGTTGAACGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCATATTGAATGGTGCCTACAATTATGGGAAGTTCCAGATGGGCTTCAGCATATTACTACCCTCAAGGAGTTAACAATCAACGTGATGACTAGTAGATTCTGCAGTAGGGTTAGGGAAGGAGGAGAGGATTTCTACAAAATTAAACATGTGCCTTCTATTATAATCACTAATATTCAACCTGACTACAAGAAAGACGAGGAGCCAGAAATGGAGGAAGCAGCAGGTGCTTCTCGAGTAGTTGCTAACGACTCTGAGGAATCAACTGTGGACGGTATGTGGCTAATTGACTTTGTCCGTTTTATGATAGCATAA

Protein Analysis

962

Amino Acids

111.22

Weight (kDa)

7.96

Isoelectric Point (pI)

49.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 13 - 91 4.4e-19 Rx N-terminal domain
NB-ARC PF00931 146 - 319 3.1e-42 NB-ARC domain
WHD_DRP PF23559 419 - 494 4.5e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 565 - 890 8.8e-34 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 4 cut(s) 408, 638, 1319, 2738
AarI CACCTGC 1 cut(s) 2789
Acc36I ACCTGC 1 cut(s) 2789
AccB1I GGYRCC 1 cut(s) 2589
AccB7I CCANNNNNTGG 1 cut(s) 1559
AccI GTMKAC 2 cut(s) 1072, 1122
AccII CGCG 1 cut(s) 135
AciI CCGC 6 cut(s) 26, 133, 135, 184, 510, 1888
AclI AACGTT 1 cut(s) 2360
AclWI GGATC 4 cut(s) 44, 124, 1272, 1921
AcsI RAATTY 7 cut(s) 678, 978, 1353, 1504, 1763, 2315, 2498
AcuI CTGAAG 7 cut(s) 27, 51, 1760, 1838, 2135, 2552, 2606
AcyI GRCGYC 1 cut(s) 1999
AfaI GTAC 5 cut(s) 280, 1020, 1104, 1866, 2371
AfiI CCNNNNNNNGG 6 cut(s) 190, 925, 1559, 1588, 1668, 2421
AflII CTTAAG 1 cut(s) 1429
AflIII ACRYGT 2 cut(s) 2169, 2722
AhlI ACTAGT 2 cut(s) 1537, 2666
AjnI CCWGG 1 cut(s) 2476
AjuI GAANNNNNNNTTGG 2 cut(s) 1942, 1974
AluBI AGCT 8 cut(s) 93, 106, 260, 924, 1861, 2224, 2290, 2329
AluI AGCT 8 cut(s) 93, 106, 260, 924, 1861, 2224, 2290, 2329
Alw21I GWGCWC 1 cut(s) 1638
Alw26I GTCTC 5 cut(s) 45, 1073, 1460, 1467, 1650
AlwI GGATC 4 cut(s) 44, 124, 1272, 1921
Ama87I CYCGRG 1 cut(s) 2808
AoxI GGCC 1 cut(s) 2141
ApeKI GCWGC 5 cut(s) 212, 2290, 2329, 2410, 2795
ApoI RAATTY 7 cut(s) 678, 978, 1353, 1504, 1763, 2315, 2498
AspA2I CCTAGG 1 cut(s) 2434
AspLEI GCGC 1 cut(s) 567
AspS9I GGNCC 2 cut(s) 348, 751
AsuHPI GGTGA 5 cut(s) 463, 473, 1453, 2072, 2341
AsuII TTCGAA 1 cut(s) 1570
AvaI CYCGRG 1 cut(s) 2808
AvaII GGWCC 2 cut(s) 348, 751
AvrII CCTAGG 1 cut(s) 2434
AxyI CCTNAGG 1 cut(s) 1260
BanI GGYRCC 1 cut(s) 2589
BbsI GAAGAC 4 cut(s) 1055, 1579, 2195, 2558
Bbv12I GWGCWC 1 cut(s) 1638
BbvI GCAGC 5 cut(s) 199, 2277, 2316, 2397, 2807
BccI CCATC 6 cut(s) 499, 1052, 1225, 1616, 1852, 2609
BceAI ACGGC 2 cut(s) 1437, 2156
BcgI CGANNNNNNTGC 2 cut(s) 1461, 1495
BciT130I CCWGG 1 cut(s) 2478
BciVI GTATCC 1 cut(s) 734
BclI TGATCA 1 cut(s) 883
BcoDI GTCTC 5 cut(s) 45, 1073, 1460, 1467, 1650
BcuI ACTAGT 2 cut(s) 1537, 2666
BfaI CTAG 8 cut(s) 264, 1382, 1538, 1793, 2145, 2435, 2562, 2667
BfmI CTRYAG 3 cut(s) 718, 1878, 2677
BfoI RGCGCY 1 cut(s) 568
BfrI CTTAAG 1 cut(s) 1429
BfuAI ACCTGC 1 cut(s) 2789
BfuI GTATCC 1 cut(s) 734
BglII AGATCT 2 cut(s) 1400, 1882
BisI GCNGC 8 cut(s) 27, 136, 213, 511, 2291, 2330, 2411, 2796
BlnI CCTAGG 1 cut(s) 2434
BlsI GCNGC 8 cut(s) 28, 137, 214, 512, 2292, 2331, 2412, 2797
Bme1390I CCNGG 1 cut(s) 2478
Bme18I GGWCC 2 cut(s) 348, 751
BmeT110I CYCGRG 1 cut(s) 2808
BmgT120I GGNCC 2 cut(s) 348, 751
BmiI GGNNCC 3 cut(s) 349, 2591, 2778
BmrFI CCNGG 1 cut(s) 2478
BmsI GCATC 6 cut(s) 139, 145, 199, 321, 1002, 2397
BpiI GAAGAC 4 cut(s) 1055, 1579, 2195, 2558
Bpu14I TTCGAA 1 cut(s) 1570
BpuEI CTTGAG 4 cut(s) 100, 756, 1822, 2624
Bsa29I ATCGAT 1 cut(s) 1706
BsaHI GRCGYC 1 cut(s) 1999
BsaI GGTCTC 1 cut(s) 1650
BsaJI CCNNGG 5 cut(s) 46, 133, 1994, 2434, 2476
BsaXI ACNNNNNCTCC 6 cut(s) 262, 267, 292, 297, 1566, 1596
Bsc4I CCNNNNNNNGG 6 cut(s) 190, 925, 1559, 1588, 1668, 2421
Bse1I ACTGG 1 cut(s) 453
Bse21I CCTNAGG 1 cut(s) 1260
BseBI CCWGG 1 cut(s) 2478
BseCI ATCGAT 1 cut(s) 1706
BseDI CCNNGG 5 cut(s) 46, 133, 1994, 2434, 2476
BseGI GGATG 5 cut(s) 235, 510, 625, 703, 1597
BseLI CCNNNNNNNGG 6 cut(s) 190, 925, 1559, 1588, 1668, 2421
BseMII CTCAG 7 cut(s) 157, 377, 1251, 1802, 1967, 2369, 2820
BseNI ACTGG 1 cut(s) 453
BseRI GAGGAG 5 cut(s) 283, 288, 1514, 2712, 2789
BseXI GCAGC 5 cut(s) 199, 2277, 2316, 2397, 2807
BseYI CCCAGC 2 cut(s) 924, 2332
BsgI GTGCAG 1 cut(s) 107
Bsh1236I CGCG 1 cut(s) 135
Bsh1285I CGRYCG 1 cut(s) 1706
BshFI GGCC 1 cut(s) 2143
BshNI GGYRCC 1 cut(s) 2589
BshVI ATCGAT 1 cut(s) 1706
BsiEI CGRYCG 1 cut(s) 1706
BsiHKAI GWGCWC 1 cut(s) 1638
BsiHKCI CYCGRG 1 cut(s) 2808
BsiSI CCGG 1 cut(s) 829
BslFI GGGAC 2 cut(s) 1109, 1548
BslI CCNNNNNNNGG 6 cut(s) 190, 925, 1559, 1588, 1668, 2421
BsmAI GTCTC 5 cut(s) 45, 1073, 1460, 1467, 1650
BsmBI CGTCTC 2 cut(s) 1073, 1460
BsmFI GGGAC 2 cut(s) 1109, 1548
BsmI GAATGC 1 cut(s) 784
BsnI GGCC 1 cut(s) 2143
Bso31I GGTCTC 1 cut(s) 1650
BsoBI CYCGRG 1 cut(s) 2808
Bsp119I TTCGAA 1 cut(s) 1570
Bsp1286I GDGCHC 1 cut(s) 1638
Bsp1407I TGTACA 1 cut(s) 1018
BspACI CCGC 6 cut(s) 26, 133, 135, 184, 510, 1888
BspANI GGCC 1 cut(s) 2143
BspCNI CTCAG 7 cut(s) 156, 378, 1252, 1803, 1968, 2370, 2821
BspDI ATCGAT 1 cut(s) 1706
BspFNI CGCG 1 cut(s) 135
BspHI TCATGA 1 cut(s) 1267
BspLI GGNNCC 3 cut(s) 349, 2591, 2778
BspMAI CTGCAG 1 cut(s) 2681
BspMI ACCTGC 1 cut(s) 2789
BspPI GGATC 4 cut(s) 44, 124, 1272, 1921
BspQI GCTCTTC 1 cut(s) 2319
BspT104I TTCGAA 1 cut(s) 1570
BspT107I GGYRCC 1 cut(s) 2589
BspTI CTTAAG 1 cut(s) 1429
BspTNI GGTCTC 1 cut(s) 1650
BsrGI TGTACA 1 cut(s) 1018
BsrI ACTGG 1 cut(s) 453
BssECI CCNNGG 5 cut(s) 46, 133, 1994, 2434, 2476
BssNAI GTATAC 1 cut(s) 1123
BssNI GRCGYC 1 cut(s) 1999
BssT1I CCWWGG 2 cut(s) 1994, 2434
Bst1107I GTATAC 1 cut(s) 1123
Bst2UI CCWGG 1 cut(s) 2478
Bst4CI ACNGT 8 cut(s) 283, 485, 933, 1102, 1835, 1879, 2842, 2849
Bst6I CTCTTC 4 cut(s) 168, 1491, 1621, 2319
BstACI GRCGYC 1 cut(s) 1999
BstAFI CTTAAG 1 cut(s) 1429
BstAPI GCANNNNNTGC 1 cut(s) 2801
BstAUI TGTACA 1 cut(s) 1018
BstBI TTCGAA 1 cut(s) 1570
BstC8I GCNNGC 5 cut(s) 108, 310, 870, 1056, 1484
BstDSI CCRYGG 1 cut(s) 133
BstEII GGTNACC 1 cut(s) 1839
BstF5I GGATG 5 cut(s) 235, 510, 625, 703, 1597
BstFNI CGCG 1 cut(s) 135
BstH2I RGCGCY 1 cut(s) 568
BstHHI GCGC 1 cut(s) 567
BstMAI GTCTC 5 cut(s) 45, 1073, 1460, 1467, 1650
BstMCI CGRYCG 1 cut(s) 1706
BstMWI GCNNNNNNNGC 4 cut(s) 869, 1978, 2296, 2801
BstNI CCWGG 1 cut(s) 2478
BstNSI RCATGY 3 cut(s) 1343, 2173, 2726
BstPI GGTNACC 1 cut(s) 1839
BstSCI CCNGG 1 cut(s) 2476
BstSFI CTRYAG 3 cut(s) 718, 1878, 2677
BstUI CGCG 1 cut(s) 135
BstV1I GCAGC 5 cut(s) 199, 2277, 2316, 2397, 2807
BstV2I GAAGAC 4 cut(s) 1055, 1579, 2195, 2558
BstX2I RGATCY 3 cut(s) 1400, 1882, 1913
BstYI RGATCY 3 cut(s) 1400, 1882, 1913
BstZ17I GTATAC 1 cut(s) 1123
Bsu15I ATCGAT 1 cut(s) 1706
Bsu36I CCTNAGG 1 cut(s) 1260
BsuI GTATCC 1 cut(s) 734
BsuRI GGCC 1 cut(s) 2143
BsuTUI ATCGAT 1 cut(s) 1706
BtgI CCRYGG 1 cut(s) 133
BtgZI GCGATG 1 cut(s) 962
BtsCI GGATG 5 cut(s) 235, 510, 625, 703, 1597
BtsIMutI CAGTG 1 cut(s) 1840
BveI ACCTGC 1 cut(s) 2789
Cac8I GCNNGC 5 cut(s) 108, 310, 870, 1056, 1484
CciI TCATGA 1 cut(s) 1267
CfoI GCGC 1 cut(s) 567
Cfr13I GGNCC 2 cut(s) 348, 751
Cfr42I CCGCGG 1 cut(s) 136
ClaI ATCGAT 1 cut(s) 1706
CseI GACGC 3 cut(s) 467, 1988, 2189
Csp6I GTAC 5 cut(s) 279, 1019, 1103, 1865, 2370
CviAII CATG 6 cut(s) 1268, 1340, 1460, 2170, 2557, 2723
CviQI GTAC 5 cut(s) 279, 1019, 1103, 1865, 2370
Eam1104I CTCTTC 4 cut(s) 168, 1491, 1621, 2319
EarI CTCTTC 4 cut(s) 168, 1491, 1621, 2319
Eco130I CCWWGG 2 cut(s) 1994, 2434
Eco31I GGTCTC 1 cut(s) 1650
Eco32I GATATC 1 cut(s) 2178
Eco47I GGWCC 2 cut(s) 348, 751
Eco57I CTGAAG 7 cut(s) 27, 51, 1760, 1838, 2135, 2552, 2606
Eco81I CCTNAGG 1 cut(s) 1260
Eco88I CYCGRG 1 cut(s) 2808
Eco91I GGTNACC 1 cut(s) 1839
EcoO65I GGTNACC 1 cut(s) 1839
EcoRII CCWGG 1 cut(s) 2476
EcoRV GATATC 1 cut(s) 2178
EcoT14I CCWWGG 2 cut(s) 1994, 2434
EcoT22I ATGCAT 1 cut(s) 1341
ErhI CCWWGG 2 cut(s) 1994, 2434
Esp3I CGTCTC 2 cut(s) 1073, 1460
FaeI CATG 6 cut(s) 1271, 1343, 1463, 2173, 2560, 2726
FalI AAGNNNNNCTT 2 cut(s) 90, 122
FaqI GGGAC 2 cut(s) 1109, 1548
FatI CATG 6 cut(s) 1267, 1339, 1459, 2169, 2556, 2722
FauNDI CATATG 2 cut(s) 764, 2194
FbaI TGATCA 1 cut(s) 883
FblI GTMKAC 2 cut(s) 1072, 1122
Fnu4HI GCNGC 8 cut(s) 27, 136, 213, 511, 2291, 2330, 2411, 2796
FokI GGATG 5 cut(s) 242, 517, 632, 710, 1604
Fsp4HI GCNGC 8 cut(s) 27, 136, 213, 511, 2291, 2330, 2411, 2796
FspBI CTAG 8 cut(s) 264, 1382, 1538, 1793, 2145, 2435, 2562, 2667
GlaI GCGC 1 cut(s) 566
GluI GCNGC 8 cut(s) 27, 136, 213, 511, 2291, 2330, 2411, 2796
GsaI CCCAGC 2 cut(s) 928, 2336
HaeII RGCGCY 1 cut(s) 568
HaeIII GGCC 1 cut(s) 2143
HapII CCGG 1 cut(s) 829
HgaI GACGC 3 cut(s) 467, 1988, 2189
HhaI GCGC 1 cut(s) 567
Hin1I GRCGYC 1 cut(s) 1999
Hin1II CATG 6 cut(s) 1271, 1343, 1463, 2173, 2560, 2726
Hin6I GCGC 1 cut(s) 565
HinP1I GCGC 1 cut(s) 565
HincII GTYRAC 2 cut(s) 2106, 2649
HindII GTYRAC 2 cut(s) 2106, 2649
HpaI GTTAAC 2 cut(s) 2106, 2649
HpaII CCGG 1 cut(s) 829
HphI GGTGA 5 cut(s) 463, 473, 1453, 2072, 2341
Hpy166II GTNNAC 8 cut(s) 1034, 1073, 1123, 1798, 2015, 2106, 2649, 2845
Hpy8I GTNNAC 8 cut(s) 1034, 1073, 1123, 1798, 2015, 2106, 2649, 2845
HpyCH4III ACNGT 8 cut(s) 283, 485, 933, 1102, 1835, 1879, 2842, 2849
HpyCH4IV ACGT 4 cut(s) 1328, 2054, 2360, 2658
HpyF10VI GCNNNNNNNGC 4 cut(s) 869, 1978, 2296, 2801
HpySE526I ACGT 4 cut(s) 1328, 2054, 2360, 2658
Hsp92I GRCGYC 1 cut(s) 1999
Hsp92II CATG 6 cut(s) 1271, 1343, 1463, 2173, 2560, 2726
HspAI GCGC 1 cut(s) 565
Ksp22I TGATCA 1 cut(s) 883
KspAI GTTAAC 2 cut(s) 2106, 2649
KspI CCGCGG 1 cut(s) 136
LguI GCTCTTC 1 cut(s) 2319
LmnI GCTCC 2 cut(s) 1969, 2776
Lsp1109I GCAGC 5 cut(s) 199, 2277, 2316, 2397, 2807
LweI GCATC 6 cut(s) 139, 145, 199, 321, 1002, 2397
MaeI CTAG 8 cut(s) 264, 1382, 1538, 1793, 2145, 2435, 2562, 2667
MaeII ACGT 4 cut(s) 1328, 2054, 2360, 2658
MaeIII GTNAC 6 cut(s) 479, 1770, 1839, 2000, 2147, 2384
MfeI CAATTG 1 cut(s) 2070
MflI RGATCY 3 cut(s) 1400, 1882, 1913
MhlI GDGCHC 1 cut(s) 1638
MlyI GAGTC 4 cut(s) 96, 763, 1822, 2819
MmeI TCCRAC 1 cut(s) 751
Mph1103I ATGCAT 1 cut(s) 1341
MslI CAYNNNNRTG 2 cut(s) 1049, 1590
MspA1I CMGCKG 1 cut(s) 135
MspCI CTTAAG 1 cut(s) 1429
MspI CCGG 1 cut(s) 829
MspR9I CCNGG 1 cut(s) 2478
MunI CAATTG 1 cut(s) 2070
Mva1269I GAATGC 1 cut(s) 784
MvaI CCWGG 1 cut(s) 2478
MvnI CGCG 1 cut(s) 135
MwoI GCNNNNNNNGC 4 cut(s) 869, 1978, 2296, 2801
NdeI CATATG 2 cut(s) 764, 2194
NlaIII CATG 6 cut(s) 1271, 1343, 1463, 2173, 2560, 2726
NlaIV GGNNCC 3 cut(s) 349, 2591, 2778
NmuCI GTSAC 4 cut(s) 479, 2000, 2147, 2384
NsiI ATGCAT 1 cut(s) 1341
NspI RCATGY 3 cut(s) 1343, 2173, 2726
NspV TTCGAA 1 cut(s) 1570
PaeR7I CTCGAG 1 cut(s) 2808
PagI TCATGA 1 cut(s) 1267
PaqCI CACCTGC 1 cut(s) 2789
PciI ACATGT 2 cut(s) 2169, 2722
PciSI GCTCTTC 1 cut(s) 2319
PctI GAATGC 1 cut(s) 784
PfeI GAWTC 6 cut(s) 239, 801, 1789, 1944, 2673, 2834
PflFI GACNNNGTC 2 cut(s) 1290, 2867
PflMI CCANNNNNTGG 1 cut(s) 1559
PkrI GCNGC 8 cut(s) 28, 137, 214, 512, 2292, 2331, 2412, 2797
Ple19I CGATCG 1 cut(s) 1706
PleI GAGTC 4 cut(s) 95, 763, 1821, 2819
PpsI GAGTC 4 cut(s) 95, 763, 1821, 2819
PscI ACATGT 2 cut(s) 2169, 2722
PsiI TTATAA 4 cut(s) 408, 638, 1319, 2738
Psp1406I AACGTT 1 cut(s) 2360
Psp6I CCWGG 1 cut(s) 2476
PspEI GGTNACC 1 cut(s) 1839
PspFI CCCAGC 2 cut(s) 924, 2332
PspGI CCWGG 1 cut(s) 2476
PspN4I GGNNCC 3 cut(s) 349, 2591, 2778
PspPI GGNCC 2 cut(s) 348, 751
PstI CTGCAG 1 cut(s) 2681
PsuI RGATCY 3 cut(s) 1400, 1882, 1913
PsyI GACNNNGTC 2 cut(s) 1290, 2867
PvuI CGATCG 1 cut(s) 1706
RsaI GTAC 5 cut(s) 280, 1020, 1104, 1866, 2371
RsaNI GTAC 5 cut(s) 279, 1019, 1103, 1865, 2370
RseI CAYNNNNRTG 2 cut(s) 1049, 1590
SacII CCGCGG 1 cut(s) 136
SapI GCTCTTC 1 cut(s) 2319
SatI GCNGC 8 cut(s) 27, 136, 213, 511, 2291, 2330, 2411, 2796
Sau96I GGNCC 2 cut(s) 348, 751
SchI GAGTC 4 cut(s) 96, 763, 1822, 2819
ScrFI CCNGG 1 cut(s) 2478
SduI GDGCHC 1 cut(s) 1638
SfaNI GCATC 6 cut(s) 139, 145, 199, 321, 1002, 2397
SfcI CTRYAG 3 cut(s) 718, 1878, 2677
Sfr274I CTCGAG 1 cut(s) 2808
Sfr303I CCGCGG 1 cut(s) 136
SfuI TTCGAA 1 cut(s) 1570
SgrBI CCGCGG 1 cut(s) 136
SinI GGWCC 2 cut(s) 348, 751
SlaI CTCGAG 1 cut(s) 2808
SmiMI CAYNNNNRTG 2 cut(s) 1049, 1590
SmlI CTYRAG 6 cut(s) 79, 771, 1429, 1801, 2639, 2808
SmoI CTYRAG 6 cut(s) 79, 771, 1429, 1801, 2639, 2808
SpeI ACTAGT 2 cut(s) 1537, 2666
SsiI CCGC 6 cut(s) 26, 133, 135, 184, 510, 1888
SspI AATATT 1 cut(s) 2749
SspMI CTAG 8 cut(s) 264, 1382, 1538, 1793, 2145, 2435, 2562, 2667
StyD4I CCNGG 1 cut(s) 2476
StyI CCWWGG 2 cut(s) 1994, 2434
TaaI ACNGT 8 cut(s) 283, 485, 933, 1102, 1835, 1879, 2842, 2849
TaiI ACGT 4 cut(s) 1331, 2057, 2363, 2661
TaqI TCGA 4 cut(s) 392, 1570, 1706, 2809
TatI WGTACW 2 cut(s) 1018, 2369
TauI GCSGC 3 cut(s) 29, 138, 513
TfiI GAWTC 6 cut(s) 239, 801, 1789, 1944, 2673, 2834
TscAI CASTG 1 cut(s) 1840
TseFI GTSAC 4 cut(s) 479, 2000, 2147, 2384
TseI GCWGC 5 cut(s) 212, 2290, 2329, 2410, 2795
Tsp45I GTSAC 4 cut(s) 479, 2000, 2147, 2384
TspDTI ATGAA 7 cut(s) 46, 336, 570, 704, 714, 1608, 1923
TspGWI ACGGA 2 cut(s) 2116, 2861
TspRI CASTG 1 cut(s) 1840
Tth111I GACNNNGTC 2 cut(s) 1290, 2867
Van91I CCANNNNNTGG 1 cut(s) 1559
Vha464I CTTAAG 1 cut(s) 1429
VpaK11BI GGWCC 2 cut(s) 348, 751
XapI RAATTY 7 cut(s) 678, 978, 1353, 1504, 1763, 2315, 2498
XceI RCATGY 3 cut(s) 1343, 2173, 2726
XcmI CCANNNNNNNNNTGG 1 cut(s) 2359
XhoI CTCGAG 1 cut(s) 2808
XmaJI CCTAGG 1 cut(s) 2434
XmiI GTMKAC 2 cut(s) 1072, 1122
XspI CTAG 8 cut(s) 264, 1382, 1538, 1793, 2145, 2435, 2562, 2667
Zsp2I ATGCAT 1 cut(s) 1341
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.