Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0015150.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

11148 .. 14424

Gene Structure 3277 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0015150.1_g000003.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1947 bp

atgggcggctccggaaaaaccactcttgcaaaacaggtttttcttcaagataaagttaagcgtcattttgattgttctgcttgggtctgtatatctcaacaatgtgaaggaagagatgttttggaagagattttcattaaactcagttccccaacacaagagcaaaggaaagaaattgccaagatgagaaaggatgaaatagcagagaaggtttgtagtatccaacgagaaaagagaagtctggtggtccttgatgacatatggactcacgaggcatggggttccataaaagcagctggattcccaatcaatgaggaaacagagagccggatattacagttattactcaccactcgtaagaaagaagttgccttgtttgtatccagaaatgattttctccaccaacctcaacctctagatgacaagcaaagctgggaactgtttgaaaagattgcgatatctagaagagaggaaacagaccaagaaatttatgcaaagaagagagaattaggaaagaagatgctcgatcgttgttcaggttttccattagccatcagtgtgctcgctggtcttttaagtagaagagagacagatgctgaatgggaaactgtacttggaagtgttgatgcatacataatgagaggctcaaatgtacttgaaagagaaaacaccggtcaagaatatggtctattgggtgtcttggcattgagttatgatgacttaccatctcacttaaaactctgttttctatatttaacccattttcctgaggatcatgagatactggtaaaaagattgactcaattatggattgcagaaggttttataacttcaaagttagaaatgcatgtcttagtggaaatattggaagaagtatcgtatagttgcctagttgaattggtggaaagatctatgattcaagttgcagaatatggtttaagtgggaaggtgaaaacttgccgtctccatgatcttatgcgagacttgtgcttgcaaaaggcagaggaggagaattttctccgaattattaatttttctgcgggtctggtacataagacagcactaattggtaaggttcgaagacttgccatctacttggatgaaaatgttaaatatgagttgagtggtaaggttagaagagatggccacgttaggtctctattatactttgccccaaaaaatttcgaccaaaagtggaacaaaagaataatgcggtcagtattcaatgacttcaaattgcttagagttcttaagtttgaaaatatatacagagattttgacttgccaaagacgattgggagtctagtccacctgaggcttctaagtctgaaggatagtgcatttcgttcgttgccatcatctgtatataatctggtacttttgcagactctagatctgcgtggttatgctttatttcccttttggtttggtcgggagagggtgaccaaaatcagaaatgtgttttggaatatggagcaactgaggcatttatatttaccttctgagcactctgtaagtggtaagaaactatcattagcaccgctgtgcaatttgcagacgttggtcaatgtttcaatcaagaattgtgatttgaatgatcttgttcaattaaccaatctgaagaaacaatgcataactgcatcacagtctagtgacttgcaaaagttgaaggacatgttgatatcaagaagcataacatttaaacatcttcggtggctatctctgacggcaggccaacatgttaatgaggatataccaagagatatagttttaagattggagtatatgtcgatcaagaatgcaagagagctatgggtagcactagaagagcgttttggcaatgtccaagattccctcctccctgacttgaaggttcaatggaacaatctgcactttgctgatttcaagtctgttgttttggcaatgtccaagttccctcctccctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

648

Amino Acids

75.04

Weight (kDa)

8.77

Isoelectric Point (pI)

48.89

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	827
AccIII	TCCGGA	1 cut(s)	11
AciI	CCGC	4 cut(s)	6, 1040, 1213, 1541
AclWI	GGATC	1 cut(s)	780
AcoI	YGGCCR	1 cut(s)	1144
AcsI	RAATTY	3 cut(s)	486, 1012, 1180
AcuI	CTGAAG	2 cut(s)	1349, 1640
AfaI	GTAC	4 cut(s)	612, 654, 1050, 1377
AflII	CTTAAG	1 cut(s)	1250
AflIII	ACRYGT	2 cut(s)	1674, 1738
AgeI	ACCGGT	1 cut(s)	671
AjuI	GAANNNNNNNTTGG	6 cut(s)	597, 629, 1447, 1479, 1818, 1850
AleI	CACNNNNGTG	1 cut(s)	1543
AluBI	AGCT	3 cut(s)	296, 432, 1810
AluI	AGCT	3 cut(s)	296, 432, 1810
Alw21I	GWGCWC	2 cut(s)	564, 1509
Alw26I	GTCTC	4 cut(s)	581, 968, 975, 1161
AlwI	GGATC	1 cut(s)	780
AlwNI	CAGNNNCTG	1 cut(s)	596
Aor13HI	TCCGGA	1 cut(s)	11
AoxI	GGCC	2 cut(s)	1144, 1732
ApeKI	GCWGC	1 cut(s)	293
ApoI	RAATTY	3 cut(s)	486, 1012, 1180
AseI	ATTAAT	1 cut(s)	1029
AsiGI	ACCGGT	1 cut(s)	671
AspS9I	GGNCC	1 cut(s)	247
AsuHPI	GGTGA	3 cut(s)	340, 961, 1453
AsuII	TTCGAA	1 cut(s)	1078
AvaII	GGWCC	1 cut(s)	247
AxyI	CCTNAGG	2 cut(s)	768, 1313
BalI	TGGCCA	1 cut(s)	1146
BauI	CACGAG	1 cut(s)	269
BbsI	GAAGAC	1 cut(s)	1087
Bbv12I	GWGCWC	2 cut(s)	564, 1509
BbvI	GCAGC	1 cut(s)	305
BccI	CCATC	5 cut(s)	560, 733, 1097, 1136, 1363
BceAI	ACGGC	2 cut(s)	945, 1743
BcgI	CGANNNNNNTGC	4 cut(s)	969, 1003, 1329, 1363
BciVI	GTATCC	2 cut(s)	230, 391
BcoDI	GTCTC	4 cut(s)	581, 968, 975, 1161
BfaI	CTAG	7 cut(s)	416, 462, 890, 1304, 1391, 1650, 1823
BfrI	CTTAAG	1 cut(s)	1250
BfuI	GTATCC	2 cut(s)	230, 391
BglII	AGATCT	2 cut(s)	908, 1393
BisI	GCNGC	2 cut(s)	7, 294
BlsI	GCNGC	2 cut(s)	8, 295
Bme18I	GGWCC	1 cut(s)	247
BmgT120I	GGNCC	1 cut(s)	247
BmiI	GGNNCC	2 cut(s)	10, 283
BmsI	GCATC	4 cut(s)	510, 583, 616, 1649
BoxI	GACNNNNGTC	1 cut(s)	1562
BpiI	GAAGAC	1 cut(s)	1087
Bpu14I	TTCGAA	1 cut(s)	1078
BsaI	GGTCTC	1 cut(s)	1161
BsaWI	WCCGGW	2 cut(s)	11, 671
BsaXI	ACNNNNNCTCC	2 cut(s)	1772, 1802
Bse118I	RCCGGY	1 cut(s)	671
Bse1I	ACTGG	1 cut(s)	789
Bse21I	CCTNAGG	2 cut(s)	768, 1313
Bse3DI	GCAATG	2 cut(s)	1846, 1929
BseAI	TCCGGA	1 cut(s)	11
BseGI	GGATG	2 cut(s)	199, 1105
BseMI	GCAATG	2 cut(s)	1846, 1929
BseMII	CTCAG	5 cut(s)	157, 759, 1304, 1472, 1494
BseNI	ACTGG	1 cut(s)	789
BseRI	GAGGAG	4 cut(s)	1019, 1022, 1847, 1929
BseXI	GCAGC	1 cut(s)	305
BseYI	CCCAGC	1 cut(s)	432
BsgI	GTGCAG	1 cut(s)	1874
Bsh1285I	CGRYCG	1 cut(s)	529
BshFI	GGCC	2 cut(s)	1146, 1734
BshTI	ACCGGT	1 cut(s)	671
BsiEI	CGRYCG	1 cut(s)	529
BsiHKAI	GWGCWC	2 cut(s)	564, 1509
BsiSI	CCGG	3 cut(s)	12, 328, 672
BsmAI	GTCTC	4 cut(s)	581, 968, 975, 1161
BsmBI	CGTCTC	1 cut(s)	968
BsmI	GAATGC	1 cut(s)	1804
BsnI	GGCC	2 cut(s)	1146, 1734
Bso31I	GGTCTC	1 cut(s)	1161
Bsp119I	TTCGAA	1 cut(s)	1078
Bsp1286I	GDGCHC	2 cut(s)	564, 1509
Bsp13I	TCCGGA	1 cut(s)	11
Bsp143I	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
BspACI	CCGC	4 cut(s)	6, 1040, 1213, 1541
BspANI	GGCC	2 cut(s)	1146, 1734
BspCNI	CTCAG	5 cut(s)	156, 760, 1305, 1473, 1495
BspEI	TCCGGA	1 cut(s)	11
BspHI	TCATGA	1 cut(s)	775
BspLI	GGNNCC	2 cut(s)	10, 283
BspPI	GGATC	1 cut(s)	780
BspQI	GCTCTTC	1 cut(s)	1821
BspT104I	TTCGAA	1 cut(s)	1078
BspTI	CTTAAG	1 cut(s)	1250
BspTNI	GGTCTC	1 cut(s)	1161
BsrDI	GCAATG	2 cut(s)	1846, 1929
BsrFI	RCCGGY	1 cut(s)	671
BsrI	ACTGG	1 cut(s)	789
BssAI	RCCGGY	1 cut(s)	671
BssMI	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
BssSI	CACGAG	1 cut(s)	269
Bst2BI	CACGAG	1 cut(s)	269
Bst4CI	ACNGT	4 cut(s)	339, 441, 610, 1647
Bst6I	CTCTTC	7 cut(s)	106, 120, 460, 494, 577, 1132, 1821
BstAFI	CTTAAG	1 cut(s)	1250
BstBI	TTCGAA	1 cut(s)	1078
BstC8I	GCNNGC	3 cut(s)	564, 992, 1732
BstDEI	CTNAG	8 cut(s)	143, 768, 853, 1241, 1313, 1322, 1481, 1503
BstEII	GGTNACC	1 cut(s)	1441
BstF5I	GGATG	2 cut(s)	199, 1105
BstKTI	GATC	7 cut(s)	529, 775, 911, 973, 1396, 1600, 1794
BstMAI	GTCTC	4 cut(s)	581, 968, 975, 1161
BstMBI	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
BstMCI	CGRYCG	1 cut(s)	529
BstMWI	GCNNNNNNNGC	1 cut(s)	1483
BstNSI	RCATGY	3 cut(s)	851, 1678, 1742
BstPAI	GACNNNNGTC	1 cut(s)	1562
BstPI	GGTNACC	1 cut(s)	1441
BstV1I	GCAGC	1 cut(s)	305
BstV2I	GAAGAC	1 cut(s)	1087
BstX2I	RGATCY	2 cut(s)	908, 1393
BstXI	CCANNNNNNTGG	1 cut(s)	1096
BstYI	RGATCY	2 cut(s)	908, 1393
Bsu36I	CCTNAGG	2 cut(s)	768, 1313
BsuI	GTATCC	2 cut(s)	230, 391
BsuRI	GGCC	2 cut(s)	1146, 1734
BtsCI	GGATG	2 cut(s)	199, 1105
BtsIMutI	CAGTG	1 cut(s)	562
Cac8I	GCNNGC	3 cut(s)	564, 992, 1732
CaiI	CAGNNNCTG	1 cut(s)	596
CciI	TCATGA	1 cut(s)	775
Cfr10I	RCCGGY	1 cut(s)	671
Cfr13I	GGNCC	1 cut(s)	247
CseI	GACGC	1 cut(s)	50
Csp6I	GTAC	4 cut(s)	611, 653, 1049, 1376
CspAI	ACCGGT	1 cut(s)	671
CviAII	CATG	6 cut(s)	276, 776, 848, 968, 1675, 1739
CviQI	GTAC	4 cut(s)	611, 653, 1049, 1376
DdeI	CTNAG	8 cut(s)	143, 768, 853, 1241, 1313, 1322, 1481, 1503
DpnI	GATC	7 cut(s)	528, 774, 910, 972, 1395, 1599, 1793
DpnII	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
DraI	TTTAAA	1 cut(s)	1702
EaeI	YGGCCR	1 cut(s)	1144
Eam1104I	CTCTTC	7 cut(s)	106, 120, 460, 494, 577, 1132, 1821
EarI	CTCTTC	7 cut(s)	106, 120, 460, 494, 577, 1132, 1821
Eco31I	GGTCTC	1 cut(s)	1161
Eco32I	GATATC	2 cut(s)	459, 1683
Eco47I	GGWCC	1 cut(s)	247
Eco57I	CTGAAG	2 cut(s)	1349, 1640
Eco81I	CCTNAGG	2 cut(s)	768, 1313
Eco91I	GGTNACC	1 cut(s)	1441
EcoO65I	GGTNACC	1 cut(s)	1441
EcoRV	GATATC	2 cut(s)	459, 1683
EcoT22I	ATGCAT	3 cut(s)	631, 849, 1634
Esp3I	CGTCTC	1 cut(s)	968
FaeI	CATG	6 cut(s)	279, 779, 851, 971, 1678, 1742
FatI	CATG	6 cut(s)	275, 775, 847, 967, 1674, 1738
FauI	CCCGC	1 cut(s)	1033
FauNDI	CATATG	1 cut(s)	260
Fnu4HI	GCNGC	2 cut(s)	7, 294
FokI	GGATG	2 cut(s)	206, 1112
Fsp4HI	GCNGC	2 cut(s)	7, 294
FspBI	CTAG	7 cut(s)	416, 462, 890, 1304, 1391, 1650, 1823
GluI	GCNGC	2 cut(s)	7, 294
GsaI	CCCAGC	1 cut(s)	436
HaeIII	GGCC	2 cut(s)	1146, 1734
HapII	CCGG	3 cut(s)	12, 328, 672
HgaI	GACGC	1 cut(s)	50
Hin1II	CATG	6 cut(s)	279, 779, 851, 971, 1678, 1742
HinfI	GANTC	7 cut(s)	265, 300, 799, 916, 1300, 1387, 1850
HpaII	CCGG	3 cut(s)	12, 328, 672
HphI	GGTGA	3 cut(s)	340, 961, 1453
Hpy166II	GTNNAC	1 cut(s)	1309
Hpy188I	TCNGA	6 cut(s)	1022, 1329, 1454, 1504, 1620, 1725
Hpy8I	GTNNAC	1 cut(s)	1309
HpyAV	CCTTC	8 cut(s)	101, 202, 812, 940, 1324, 1509, 1663, 1864
HpyCH4III	ACNGT	4 cut(s)	339, 441, 610, 1647
HpyCH4IV	ACGT	2 cut(s)	1149, 1559
HpyF10VI	GCNNNNNNNGC	1 cut(s)	1483
HpyF3I	CTNAG	8 cut(s)	143, 768, 853, 1241, 1313, 1322, 1481, 1503
HpySE526I	ACGT	2 cut(s)	1149, 1559
Hsp92II	CATG	6 cut(s)	279, 779, 851, 971, 1678, 1742
Kpn2I	TCCGGA	1 cut(s)	11
Kzo9I	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
LguI	GCTCTTC	1 cut(s)	1821
LmnI	GCTCC	2 cut(s)	14, 1474
Lsp1109I	GCAGC	1 cut(s)	305
LweI	GCATC	4 cut(s)	510, 583, 616, 1649
MaeI	CTAG	7 cut(s)	416, 462, 890, 1304, 1391, 1650, 1823
MaeII	ACGT	2 cut(s)	1149, 1559
MaeIII	GTNAC	2 cut(s)	1441, 1652
MalI	GATC	7 cut(s)	528, 774, 910, 972, 1395, 1599, 1793
MboI	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
MflI	RGATCY	2 cut(s)	908, 1393
MhlI	GDGCHC	2 cut(s)	564, 1509
MlsI	TGGCCA	1 cut(s)	1146
MluNI	TGGCCA	1 cut(s)	1146
MlyI	GAGTC	4 cut(s)	259, 793, 1309, 1381
MmeI	TCCRAC	1 cut(s)	247
Mox20I	TGGCCA	1 cut(s)	1146
Mph1103I	ATGCAT	3 cut(s)	631, 849, 1634
MroI	TCCGGA	1 cut(s)	11
MscI	TGGCCA	1 cut(s)	1146
MslI	CAYNNNNRTG	3 cut(s)	557, 1543, 1743
Msp20I	TGGCCA	1 cut(s)	1146
MspA1I	CMGCKG	2 cut(s)	296, 1543
MspCI	CTTAAG	1 cut(s)	1250
MspI	CCGG	3 cut(s)	12, 328, 672
Mva1269I	GAATGC	1 cut(s)	1804
MwoI	GCNNNNNNNGC	1 cut(s)	1483
NdeI	CATATG	1 cut(s)	260
NdeII	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
NlaIII	CATG	6 cut(s)	279, 779, 851, 971, 1678, 1742
NlaIV	GGNNCC	2 cut(s)	10, 283
NmuCI	GTSAC	2 cut(s)	1441, 1652
NsiI	ATGCAT	3 cut(s)	631, 849, 1634
NspI	RCATGY	3 cut(s)	851, 1678, 1742
NspV	TTCGAA	1 cut(s)	1078
OliI	CACNNNNGTG	1 cut(s)	1543
PagI	TCATGA	1 cut(s)	775
PciI	ACATGT	2 cut(s)	1674, 1738
PciSI	GCTCTTC	1 cut(s)	1821
PctI	GAATGC	1 cut(s)	1804
PfeI	GAWTC	3 cut(s)	300, 916, 1850
PinAI	ACCGGT	1 cut(s)	671
PkrI	GCNGC	2 cut(s)	8, 295
Ple19I	CGATCG	1 cut(s)	529
PleI	GAGTC	4 cut(s)	259, 793, 1308, 1381
PpsI	GAGTC	4 cut(s)	259, 793, 1308, 1381
PscI	ACATGT	2 cut(s)	1674, 1738
PshAI	GACNNNNGTC	1 cut(s)	1562
PshBI	ATTAAT	1 cut(s)	1029
PsiI	TTATAA	1 cut(s)	827
PspEI	GGTNACC	1 cut(s)	1441
PspFI	CCCAGC	1 cut(s)	432
PspN4I	GGNNCC	2 cut(s)	10, 283
PspPI	GGNCC	1 cut(s)	247
PstNI	CAGNNNCTG	1 cut(s)	596
PsuI	RGATCY	2 cut(s)	908, 1393
PvuI	CGATCG	1 cut(s)	529
PvuII	CAGCTG	1 cut(s)	296
RsaI	GTAC	4 cut(s)	612, 654, 1050, 1377
RsaNI	GTAC	4 cut(s)	611, 653, 1049, 1376
RseI	CAYNNNNRTG	3 cut(s)	557, 1543, 1743
SapI	GCTCTTC	1 cut(s)	1821
SatI	GCNGC	2 cut(s)	7, 294
Sau3AI	GATC	7 cut(s)	526, 772, 908, 970, 1393, 1597, 1791
Sau96I	GGNCC	1 cut(s)	247
SchI	GAGTC	4 cut(s)	259, 793, 1309, 1381
SduI	GDGCHC	2 cut(s)	564, 1509
SfaNI	GCATC	4 cut(s)	510, 583, 616, 1649
SfuI	TTCGAA	1 cut(s)	1078
SinI	GGWCC	1 cut(s)	247
SmiMI	CAYNNNNRTG	3 cut(s)	557, 1543, 1743
SmlI	CTYRAG	1 cut(s)	1250
SmoI	CTYRAG	1 cut(s)	1250
SsiI	CCGC	4 cut(s)	6, 1040, 1213, 1541
SspI	AATATT	1 cut(s)	864
SspMI	CTAG	7 cut(s)	416, 462, 890, 1304, 1391, 1650, 1823
TaaI	ACNGT	4 cut(s)	339, 441, 610, 1647
TaiI	ACGT	2 cut(s)	1152, 1562
TaqI	TCGA	4 cut(s)	525, 1078, 1185, 1790
TatI	WGTACW	2 cut(s)	610, 652
TauI	GCSGC	1 cut(s)	9
TfiI	GAWTC	3 cut(s)	300, 916, 1850
TscAI	CASTG	1 cut(s)	562
TseFI	GTSAC	2 cut(s)	1441, 1652
TseI	GCWGC	1 cut(s)	293
Tsp45I	GTSAC	2 cut(s)	1441, 1652
TspDTI	ATGAA	3 cut(s)	124, 210, 1116
TspRI	CASTG	1 cut(s)	562
Vha464I	CTTAAG	1 cut(s)	1250
VpaK11BI	GGWCC	1 cut(s)	247
VspI	ATTAAT	1 cut(s)	1029
XapI	RAATTY	3 cut(s)	486, 1012, 1180
XbaI	TCTAGA	3 cut(s)	415, 461, 1390
XceI	RCATGY	3 cut(s)	851, 1678, 1742
XspI	CTAG	7 cut(s)	416, 462, 890, 1304, 1391, 1650, 1823
Zsp2I	ATGCAT	3 cut(s)	631, 849, 1634

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.