Rroxscaffold_5G00352270

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
Physical Location & Seq
Forward (+)
29278815 .. 29280247
1433 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00352270.1

Sequence Viewer

Length: 1416 bp
ATGGCAGAAGGTCTAATATCTTTGGGGCAACAAGGACAAAGTTTCATCGGATCATTGGAAGACATAGGGTACAGCTACTTGAGTGAGTTAGTGGAAAGATGTGTGGTTCAAATTGGAGAAAGGGGTTCAATTAGAAAGATTAAAACTTGCCGCATCCATGACCTTATGAGAGATTTGTGCTTGTTAAAGACAGAAGAGGAGAACTTCCTTCAAATTGTCAACTTTTCGCATAAAAAAGAGGCTATGTATCCTTCTGCTTCTTCTACAGTAAGTATCAGTAAAGTTCGAAGACTTGCAATCCATTTGGATGATAAGGCTGACAGATTGGTTCCCCAAGAGATGAAAGAAATGGCCACCTCAGGTCCTTGTTATACTTTACCCCAAGAAACTGGATGCCACGAAATCAAAGATTGGTACAATCAGTTTTTAAGAGTTTTGAGGTTTGAAAATATGAGTATGGAAGTAGAGTTGCCAAGTGACATTGGGAATATGGTTCATCTCAGGTTCCTGAGCCTAAGGCGTTGTCATATAAAACGGTTGCCATTGTCCATAGGGAATTTGAAGAGCATGCAAACTCTAGATCTTAGATTTCGTCAATTAGATATTGTTCCAAATGTGCTATGGAAGATGGAACAACTGAGACACTTGTATTTACCCCTGTACTACCGTGCAAGTGGTAAACTGCGGCTTGATACTCTTCACTATTTGCAGACCTTACTGCATGTTGACAATTCTCATTTGAATGATATTACTGAACTAACCAATCTTAAAAAATTGGCTGTGCAAGTGTCGAGCCCCTTGAAGAATCTGGAGAAGGTATTAACATCTACAAGCAGCACACTTGAGCGCATCAGGTCTCTATATGTGCACAACTTAGTTGGAATTCATAGTTGTGCAGTGGTTTCACAAATAGTTTCAAAATGTCACAACATATACAAGCTTGATTTGAATGGTCCAACTGTAGAGTTACCAAAAGACCTTCAGTGCTATCCAAATCTCACCAAGTTATGGTTGTGTCGTTGCTTTCTAAAGGAGAATCAAATGTCAGTACTAGAGAAGCTGCCAAACTTAAGAAATCTTTATCTCCAATCCGGTACGTTTGAGGACAATGTCAAAACACTAGTGTGCTCCAAAGGAGGCTTTCTTCGTCTTGAATTCCTCTCCCTGAGCTACATGGACGAAATAGAGGGGTGGACTGTGGAGGAAGGAGCCATGCCTAGTCTCTGCCAATTGCACATTTCGCGGTGTAGAGGATTGACCACATTTCCAGATGGCTTGAGATACAACAGCAGCCTCAAGAAGTTGAGCATTAAGCGGATGCCTAGGACCTTCTACAGTAAGCTTCAGGAAGGAGGAGAGGATTTCTATAAAATCCAACATGTGCCTTCGCTTGTATTTGGAGAGGCGTGCGACTAG

Protein Analysis

471

Amino Acids

54.19

Weight (kDa)

8.6

Isoelectric Point (pI)

52.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 1 - 60 3.9e-10 Disease resistance protein Winged helix domain
LRR_14 PF23598 141 - 433 3e-36 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 1008
AccII CGCG 1 cut(s) 1243
AciI CCGC 4 cut(s) 151, 685, 1243, 1315
AclWI GGATC 1 cut(s) 58
AcoI YGGCCR 1 cut(s) 351
AcsI RAATTY 3 cut(s) 556, 882, 1154
AcuI CTGAAG 2 cut(s) 965, 1328
AfaI GTAC 5 cut(s) 71, 416, 662, 1050, 1096
AfiI CCNNNNNNNGG 1 cut(s) 1008
AflII CTTAAG 1 cut(s) 1069
AflIII ACRYGT 1 cut(s) 1378
AhlI ACTAGT 1 cut(s) 1120
AleI CACNNNNGTG 1 cut(s) 1123
AluBI AGCT 5 cut(s) 75, 940, 1060, 1170, 1342
AluI AGCT 5 cut(s) 75, 940, 1060, 1170, 1342
Alw21I GWGCWC 2 cut(s) 870, 1130
Alw26I GTCTC 3 cut(s) 634, 861, 1226
Alw44I GTGCAC 1 cut(s) 866
AlwI GGATC 1 cut(s) 58
AoxI GGCC 1 cut(s) 351
ApaLI GTGCAC 1 cut(s) 866
ApeKI GCWGC 3 cut(s) 834, 1060, 1290
ApoI RAATTY 3 cut(s) 556, 882, 1154
AspA2I CCTAGG 1 cut(s) 1322
AspLEI GCGC 1 cut(s) 849
AspS9I GGNCC 3 cut(s) 362, 953, 1326
AsuHPI GGTGA 1 cut(s) 991
AsuII TTCGAA 1 cut(s) 286
AvaII GGWCC 3 cut(s) 362, 953, 1326
AvrII CCTAGG 1 cut(s) 1322
AxyI CCTNAGG 2 cut(s) 358, 515
BaeGI GKGCMC 1 cut(s) 870
BalI TGGCCA 1 cut(s) 353
BanII GRGCYC 1 cut(s) 797
BbsI GAAGAC 2 cut(s) 66, 295
Bbv12I GWGCWC 2 cut(s) 870, 1130
BbvI GCAGC 3 cut(s) 846, 1047, 1302
BccI CCATC 2 cut(s) 622, 1265
BciVI GTATCC 1 cut(s) 258
BcoDI GTCTC 3 cut(s) 634, 861, 1226
BcuI ACTAGT 1 cut(s) 1120
BfaI CTAG 6 cut(s) 578, 1052, 1121, 1218, 1323, 1414
BfmI CTRYAG 3 cut(s) 264, 960, 1333
BfrI CTTAAG 1 cut(s) 1069
BfuI GTATCC 1 cut(s) 258
BglII AGATCT 1 cut(s) 580
BisI GCNGC 5 cut(s) 151, 686, 835, 1061, 1291
BlnI CCTAGG 1 cut(s) 1322
BlsI GCNGC 5 cut(s) 152, 687, 836, 1062, 1292
BmcAI AGTACT 1 cut(s) 1050
Bme18I GGWCC 3 cut(s) 362, 953, 1326
BmgT120I GGNCC 3 cut(s) 362, 953, 1326
BmiI GGNNCC 3 cut(s) 330, 506, 1210
BmsI GCATC 4 cut(s) 162, 383, 858, 1308
BpiI GAAGAC 2 cut(s) 66, 295
BpmI CTGGAG 1 cut(s) 830
Bpu10I CCTNAGC 2 cut(s) 509, 1166
Bpu14I TTCGAA 1 cut(s) 286
BpuEI CTTGAG 4 cut(s) 100, 863, 1280, 1297
BsaI GGTCTC 1 cut(s) 861
BsaJI CCNNGG 1 cut(s) 1322
BsaWI WCCGGW 1 cut(s) 1091
Bsc4I CCNNNNNNNGG 1 cut(s) 1008
Bse1I ACTGG 1 cut(s) 394
Bse21I CCTNAGG 2 cut(s) 358, 515
BseDI CCNNGG 1 cut(s) 1322
BseGI GGATG 4 cut(s) 153, 313, 398, 1323
BseLI CCNNNNNNNGG 1 cut(s) 1008
BseMII CTCAG 5 cut(s) 372, 500, 514, 629, 1157
BseNI ACTGG 1 cut(s) 394
BseRI GAGGAG 2 cut(s) 212, 1368
BseSI GKGCMC 1 cut(s) 870
BseXI GCAGC 3 cut(s) 846, 1047, 1302
BsgI GTGCAG 1 cut(s) 915
Bsh1236I CGCG 1 cut(s) 1243
BshFI GGCC 1 cut(s) 353
BsiHKAI GWGCWC 2 cut(s) 870, 1130
BsiSI CCGG 1 cut(s) 1092
BslI CCNNNNNNNGG 1 cut(s) 1008
BsmAI GTCTC 3 cut(s) 634, 861, 1226
BsnI GGCC 1 cut(s) 353
Bso31I GGTCTC 1 cut(s) 861
Bsp119I TTCGAA 1 cut(s) 286
Bsp1286I GDGCHC 3 cut(s) 797, 870, 1130
Bsp143I GATC 2 cut(s) 50, 580
BspACI CCGC 4 cut(s) 151, 685, 1243, 1315
BspANI GGCC 1 cut(s) 353
BspCNI CTCAG 5 cut(s) 371, 501, 513, 630, 1158
BspFNI CGCG 1 cut(s) 1243
BspLI GGNNCC 3 cut(s) 330, 506, 1210
BspPI GGATC 1 cut(s) 58
BspQI GCTCTTC 1 cut(s) 557
BspT104I TTCGAA 1 cut(s) 286
BspTI CTTAAG 1 cut(s) 1069
BspTNI GGTCTC 1 cut(s) 861
BsrI ACTGG 1 cut(s) 394
BssECI CCNNGG 1 cut(s) 1322
BssMI GATC 2 cut(s) 50, 580
BssT1I CCWWGG 1 cut(s) 1322
Bst4CI ACNGT 6 cut(s) 268, 537, 668, 961, 1198, 1337
Bst6I CTCTTC 3 cut(s) 189, 557, 702
BstAFI CTTAAG 1 cut(s) 1069
BstBI TTCGAA 1 cut(s) 286
BstC8I GCNNGC 2 cut(s) 569, 1408
BstDEI CTNAG 8 cut(s) 358, 500, 509, 515, 584, 638, 874, 1166
BstF5I GGATG 4 cut(s) 153, 313, 398, 1323
BstFNI CGCG 1 cut(s) 1243
BstHHI GCGC 1 cut(s) 849
BstKTI GATC 2 cut(s) 53, 583
BstMAI GTCTC 3 cut(s) 634, 861, 1226
BstMBI GATC 2 cut(s) 50, 580
BstMWI GCNNNNNNNGC 1 cut(s) 1240
BstNSI RCATGY 3 cut(s) 571, 725, 1382
BstSFI CTRYAG 3 cut(s) 264, 960, 1333
BstSLI GKGCMC 1 cut(s) 870
BstUI CGCG 1 cut(s) 1243
BstV1I GCAGC 3 cut(s) 846, 1047, 1302
BstV2I GAAGAC 2 cut(s) 66, 295
BstX2I RGATCY 1 cut(s) 580
BstXI CCANNNNNNTGG 1 cut(s) 389
BstYI RGATCY 1 cut(s) 580
Bsu36I CCTNAGG 2 cut(s) 358, 515
BsuI GTATCC 1 cut(s) 258
BsuRI GGCC 1 cut(s) 353
BtsCI GGATG 4 cut(s) 153, 313, 398, 1323
BtsI GCAGTG 1 cut(s) 903
BtsIMutI CAGTG 2 cut(s) 903, 989
Cac8I GCNNGC 2 cut(s) 569, 1408
CfoI GCGC 1 cut(s) 849
Cfr13I GGNCC 3 cut(s) 362, 953, 1326
Csp6I GTAC 5 cut(s) 70, 415, 661, 1049, 1095
CviAII CATG 6 cut(s) 158, 568, 722, 1174, 1213, 1379
CviQI GTAC 5 cut(s) 70, 415, 661, 1049, 1095
DdeI CTNAG 8 cut(s) 358, 500, 509, 515, 584, 638, 874, 1166
DpnI GATC 2 cut(s) 52, 582
DpnII GATC 2 cut(s) 50, 580
EaeI YGGCCR 1 cut(s) 351
Eam1104I CTCTTC 3 cut(s) 189, 557, 702
EarI CTCTTC 3 cut(s) 189, 557, 702
Eco130I CCWWGG 1 cut(s) 1322
Eco24I GRGCYC 1 cut(s) 797
Eco31I GGTCTC 1 cut(s) 861
Eco47I GGWCC 3 cut(s) 362, 953, 1326
Eco57I CTGAAG 2 cut(s) 965, 1328
Eco81I CCTNAGG 2 cut(s) 358, 515
EcoO109I RGGNCCY 2 cut(s) 362, 1326
EcoRI GAATTC 2 cut(s) 882, 1154
EcoT14I CCWWGG 1 cut(s) 1322
EcoT38I GRGCYC 1 cut(s) 797
ErhI CCWWGG 1 cut(s) 1322
FaeI CATG 6 cut(s) 161, 571, 725, 1177, 1216, 1382
FatI CATG 6 cut(s) 157, 567, 721, 1173, 1212, 1378
Fnu4HI GCNGC 5 cut(s) 151, 686, 835, 1061, 1291
FokI GGATG 4 cut(s) 140, 320, 405, 1330
FriOI GRGCYC 1 cut(s) 797
Fsp4HI GCNGC 5 cut(s) 151, 686, 835, 1061, 1291
FspBI CTAG 6 cut(s) 578, 1052, 1121, 1218, 1323, 1414
GlaI GCGC 1 cut(s) 848
GluI GCNGC 5 cut(s) 151, 686, 835, 1061, 1291
GsuI CTGGAG 1 cut(s) 830
HaeIII GGCC 1 cut(s) 353
HapII CCGG 1 cut(s) 1092
HhaI GCGC 1 cut(s) 849
Hin1II CATG 6 cut(s) 161, 571, 725, 1177, 1216, 1382
Hin6I GCGC 1 cut(s) 847
HinP1I GCGC 1 cut(s) 847
HincII GTYRAC 2 cut(s) 220, 727
HindII GTYRAC 2 cut(s) 220, 727
HindIII AAGCTT 2 cut(s) 938, 1340
HinfI GANTC 2 cut(s) 805, 1036
HpaII CCGG 1 cut(s) 1092
HphI GGTGA 1 cut(s) 991
Hpy166II GTNNAC 5 cut(s) 220, 680, 727, 868, 1194
Hpy188I TCNGA 1 cut(s) 50
Hpy188III TCNNGA 7 cut(s) 508, 578, 809, 1151, 1268, 1297, 1346
Hpy8I GTNNAC 5 cut(s) 220, 680, 727, 868, 1194
HpyAV CCTTC 8 cut(s) 218, 261, 808, 989, 1199, 1339, 1343, 1395
HpyCH4III ACNGT 6 cut(s) 268, 537, 668, 961, 1198, 1337
HpyCH4IV ACGT 1 cut(s) 1097
HpyCH4V TGCA 9 cut(s) 296, 571, 671, 709, 721, 784, 868, 896, 1234
HpyF10VI GCNNNNNNNGC 1 cut(s) 1240
HpyF3I CTNAG 8 cut(s) 358, 500, 509, 515, 584, 638, 874, 1166
HpySE526I ACGT 1 cut(s) 1097
Hsp92II CATG 6 cut(s) 161, 571, 725, 1177, 1216, 1382
HspAI GCGC 1 cut(s) 847
Kzo9I GATC 2 cut(s) 50, 580
LguI GCTCTTC 1 cut(s) 557
LmnI GCTCC 2 cut(s) 1133, 1208
Lsp1109I GCAGC 3 cut(s) 846, 1047, 1302
LweI GCATC 4 cut(s) 162, 383, 858, 1308
MaeI CTAG 6 cut(s) 578, 1052, 1121, 1218, 1323, 1414
MaeII ACGT 1 cut(s) 1097
MaeIII GTNAC 3 cut(s) 476, 923, 966
MalI GATC 2 cut(s) 52, 582
MboI GATC 2 cut(s) 50, 580
MboII GAAGA 9 cut(s) 71, 206, 252, 300, 574, 637, 689, 814, 1136
MfeI CAATTG 1 cut(s) 1229
MflI RGATCY 1 cut(s) 580
MhlI GDGCHC 3 cut(s) 797, 870, 1130
MlsI TGGCCA 1 cut(s) 353
MluNI TGGCCA 1 cut(s) 353
MmeI TCCRAC 3 cut(s) 859, 980, 1399
Mox20I TGGCCA 1 cut(s) 353
MscI TGGCCA 1 cut(s) 353
MseI TTAA 7 cut(s) 141, 185, 428, 768, 821, 1070, 1311
MslI CAYNNNNRTG 4 cut(s) 306, 741, 891, 1123
Msp20I TGGCCA 1 cut(s) 353
MspCI CTTAAG 1 cut(s) 1069
MspI CCGG 1 cut(s) 1092
MunI CAATTG 1 cut(s) 1229
MvnI CGCG 1 cut(s) 1243
MwoI GCNNNNNNNGC 1 cut(s) 1240
NdeII GATC 2 cut(s) 50, 580
NlaIII CATG 6 cut(s) 161, 571, 725, 1177, 1216, 1382
NlaIV GGNNCC 3 cut(s) 330, 506, 1210
NmuCI GTSAC 2 cut(s) 476, 923
NspI RCATGY 3 cut(s) 571, 725, 1382
NspV TTCGAA 1 cut(s) 286
OliI CACNNNNGTG 1 cut(s) 1123
PaeI GCATGC 1 cut(s) 571
PciI ACATGT 1 cut(s) 1378
PciSI GCTCTTC 1 cut(s) 557
PfeI GAWTC 2 cut(s) 805, 1036
PflFI GACNNNGTC 1 cut(s) 1109
PflMI CCANNNNNTGG 1 cut(s) 1008
PkrI GCNGC 5 cut(s) 152, 687, 836, 1062, 1292
PpuMI RGGWCCY 2 cut(s) 362, 1326
PscI ACATGT 1 cut(s) 1378
Psp5II RGGWCCY 2 cut(s) 362, 1326
PspN4I GGNNCC 3 cut(s) 330, 506, 1210
PspPI GGNCC 3 cut(s) 362, 953, 1326
PspPPI RGGWCCY 2 cut(s) 362, 1326
PsuI RGATCY 1 cut(s) 580
PsyI GACNNNGTC 1 cut(s) 1109
RsaI GTAC 5 cut(s) 71, 416, 662, 1050, 1096
RsaNI GTAC 5 cut(s) 70, 415, 661, 1049, 1095
RseI CAYNNNNRTG 4 cut(s) 306, 741, 891, 1123
SapI GCTCTTC 1 cut(s) 557
SaqAI TTAA 7 cut(s) 141, 185, 428, 768, 821, 1070, 1311
SatI GCNGC 5 cut(s) 151, 686, 835, 1061, 1291
Sau3AI GATC 2 cut(s) 50, 580
Sau96I GGNCC 3 cut(s) 362, 953, 1326
ScaI AGTACT 1 cut(s) 1050
SduI GDGCHC 3 cut(s) 797, 870, 1130
SfaNI GCATC 4 cut(s) 162, 383, 858, 1308
SfcI CTRYAG 3 cut(s) 264, 960, 1333
SfuI TTCGAA 1 cut(s) 286
SinI GGWCC 3 cut(s) 362, 953, 1326
SmiMI CAYNNNNRTG 4 cut(s) 306, 741, 891, 1123
SmlI CTYRAG 5 cut(s) 79, 842, 1069, 1276, 1295
SmoI CTYRAG 5 cut(s) 79, 842, 1069, 1276, 1295
SpeI ACTAGT 1 cut(s) 1120
SphI GCATGC 1 cut(s) 571
SsiI CCGC 4 cut(s) 151, 685, 1243, 1315
SspMI CTAG 6 cut(s) 578, 1052, 1121, 1218, 1323, 1414
StyI CCWWGG 1 cut(s) 1322
TaaI ACNGT 6 cut(s) 268, 537, 668, 961, 1198, 1337
TaiI ACGT 1 cut(s) 1100
TaqI TCGA 2 cut(s) 286, 791
TatI WGTACW 2 cut(s) 660, 1048
TauI GCSGC 2 cut(s) 153, 688
TfiI GAWTC 2 cut(s) 805, 1036
Tru1I TTAA 7 cut(s) 141, 185, 428, 768, 821, 1070, 1311
Tru9I TTAA 7 cut(s) 141, 185, 428, 768, 821, 1070, 1311
TscAI CASTG 2 cut(s) 903, 989
TseFI GTSAC 2 cut(s) 476, 923
TseI GCWGC 3 cut(s) 834, 1060, 1290
Tsp45I GTSAC 2 cut(s) 476, 923
TspDTI ATGAA 4 cut(s) 34, 356, 485, 875
TspRI CASTG 2 cut(s) 903, 989
Tth111I GACNNNGTC 1 cut(s) 1109
Van91I CCANNNNNTGG 1 cut(s) 1008
Vha464I CTTAAG 1 cut(s) 1069
VneI GTGCAC 1 cut(s) 866
VpaK11BI GGWCC 3 cut(s) 362, 953, 1326
XapI RAATTY 3 cut(s) 556, 882, 1154
XbaI TCTAGA 1 cut(s) 577
XceI RCATGY 3 cut(s) 571, 725, 1382
XcmI CCANNNNNNNNNTGG 1 cut(s) 618
XmaJI CCTAGG 1 cut(s) 1322
XspI CTAG 6 cut(s) 578, 1052, 1121, 1218, 1323, 1414
ZrmI AGTACT 1 cut(s) 1050
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.