Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0007456.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

21610 .. 27397

Gene Structure 5788 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0007456.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3519 bp

atgttagctacacatttggtggaagaaaaaggctctcaggtggtttctatttggggcatgggcggctcgggaaagaccactcttgcaaaacaaatttacaatcataagaaagtcaagtctcattttgattgtttcgcttgggtgtgtatatctcaacaatgtgacggtacaacagttatgaaagaaattttcattaaacttagcggagcgtccgatgagcagagaaaggaaattgcaaatctgagcaatgatgaaatagcagagaggctgtgcaatttccaacgacacataaaatgttttgtggtcatcgatgatatttggactcttgaggcatggaactcttttaaaggtggattatcagtagatgaggaggaaactcagagccgcatattattgaccactcgcaacagagaagtagcttcacttgcaaggggaaatagcttactctacgaatctcgggcgctaagtgcagatgaaagctggaatttgtttcggaagatagcattctttgaaatggatgatacaaattcagactctcaaatttattcaaagaaggaagaactgggaaagaatatgcttcaacattgtgcaggattgccattagctattatcgtgctcgcaggactactagctagaaaagacacaattgatgagtgggaaactgtgcataagaatgttaatgtatatataaggagaggcacagaccttgaacgagaatacaaaggtcaaaaacatggaggtgcttcatgggtcttggcactcagttatgacaacttaccatatcgcttaaagctatgctttttgtacttggcaaattttcctgaagattatgagatacgggtgaaaagactgactcagttatggatggcagaaggttttatatctacgacgtcaacagaaatgatggaagatgtatcatatagttgcttgagtgaattggtggaaaggtgtatggtccaagttgcggacaatggtttatctgggaaaattaaaacatgtcgtcttcatgatcttatgcgagacttgtgcatgttaaaagccgaagaggagaactttttacacgttgtcaatttttatacagggacgagaaccaatacaacacaagtcggtagagttcgaagagtggcaatgtatttgaatgaaacagttgatcaattagttcccactacaagaggtgctcccctgaggtcactcttatacttcggcccactatacttctggaagaaaaaattcatccggtctgtattcagtgacttcaatttacttagagtcttgaagttggaagatatggaaggactcatagagttaccgagcacaattggaaatctggtccacttgcggtttttaagtctaaagaacagtggagtacaaaacttgccatcatctttagctaacttggtgtgtttgcagactttagatttacgctgtgggagttataacatcccaaatgtgtttaagaagatggaacaattgaggcatttatatctatccaggagggattatcacaaggtacgtggggggcactcattggccacagctttcaacttgcagacgttggtcaatgttaaatgtggaaactgtgatttgaatgcccttgttgaattatacaatcttcggaaactatccatcctggatgaggaagggtcagaacactggaaaaaactggaggaattcttgaaatcgagaagtagtcccacatttcagcatcttcgttctctttctctgaatctgtggggtcatgattcattaacggatctatcggggtttcgttttatatacaagctgcaactggaggggccctcaatcaaggagttaccagagaacctcctgtcatttccaaacctcatcaagataaagctgtatgctactcgactgaagggggaccagatagaaatacttgagaagctgccacacttgagagtgctttacctcgaaactggtgttttcgccagccttccttcaaacacactggtttgcagcaatcgaggatttcccaatcttgaatttctttccctccgagggttgccagaaatgaaagagtggagggtggaggaaggagccatgcctcgtctccgcagattgtgcattaattactgcaagctgagggcagttccagatgggcttcaatacgttgctaccctcaaggagttaacagtcgattcgattaagcctgggccttgtttccgaggagatcgccgatacagttatggcgctgaggaggacgcacttgctctcgcgccaaacgctttcggcttccgggtgaggcgatgcccgggcttggttttggggattattggtagatctgcagcggcgaggtctctggtgaacggaaaagtgagtaggtctttcggctttccttctgctgcccgaaagatggatactctaaatgacttgcttgctgcgagtgacctcatttcgcttcattgtgctctgacaaatgaaacaattcagattctgaatgctgaatgtttacagcacgtaaagtctggagcatttcttgtaaacacgggtagcagtcagctgttggatgattgttttgtgaaacagcttttgctttatggaactttagctgggtgtgctttggatggtgatgaagggccgcaatggatggaagcatgggtaaaggagatgctcaatgtattgatacttccgcacagtgcagattatagcgaagaagtttggctggagataagggagaaagcaatatccgtattgcagacattcttctttgatgggctaacacttgttcagcaattaactgatgttagtcatgcaagtccagaaagctctctgaataaagaaaccaatcaatccaagtctcctagccagcaaggttcgggtttgtctcaaaattcaactacccggtctgatggaagacgaagtaatgagcgggaggaagatgtgactatgagtggtacagatcaagcgattagttccagttcttggtttgcttcccctgaagactcaagaagtaggaaaacacctatagattcaatgcaagagtcgacttccgaccagcttctaaaatccagaaagaggctgagtggaaagcctggtgaactgttaagggatggctgtgttgtagctctatatgcaagagatatccccggtcttcatgtcacaaggcaaagggttaaaggtggtggttggttcccagattccatgtcaaatgtaatgaaaggagatcctgcagctcagttcctcattgtaatcagaagcaagaataccattggtttgcgatcatttgctgctggtggaaagttattgcagataaatagaagaatgaaatttgtattcgcaactcacagtttggtagccatgaatccaaatccttaccaacctatggcacctccacctccatggcctcgaatgttgccgcctaaccctccaatgatgcctcccaacgctcctatggtgccccccaaccctccggtcacgagcactttctgggagactgcaaatgtgcgtgatcagctgaagaatttgcaggacactcttggtcttgcaaaagcaatgtga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

1172

Amino Acids

132.03

Weight (kDa)

8.56

Isoelectric Point (pI)

45.52

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1437
AatII	GACGTC	1 cut(s)	893
AccB1I	GGYRCC	2 cut(s)	3346, 3415
AccB7I	CCANNNNNTGG	2 cut(s)	2943, 3343
AccBSI	CCGCTC	1 cut(s)	2890
AccI	GTMKAC	1 cut(s)	3005
AccII	CGCG	1 cut(s)	2237
AclWI	GGATC	2 cut(s)	1761, 3179
AcoI	YGGCCR	1 cut(s)	1530
AcuI	CTGAAG	4 cut(s)	843, 1895, 2979, 3497
AcyI	GRCGYC	1 cut(s)	890
AfaI	GTAC	5 cut(s)	169, 806, 1368, 1512, 2917
AfiI	CCNNNNNNNGG	8 cut(s)	964, 1636, 2019, 2278, 2374, 2943, 3036, 3343
AflIII	ACRYGT	2 cut(s)	995, 1060
AjnI	CCWGG	4 cut(s)	1490, 1629, 2170, 3052
Alw21I	GWGCWC	5 cut(s)	618, 1180, 1316, 2431, 3443
Alw26I	GTCTC	7 cut(s)	123, 1014, 2075, 2322, 2823, 2850, 3446
AlwI	GGATC	2 cut(s)	1761, 3179
AlwNI	CAGNNNCTG	1 cut(s)	2455
Ama87I	CYCGRG	3 cut(s)	67, 456, 2272
AoxI	GGCC	6 cut(s)	1204, 1530, 1796, 2174, 2597, 3362
ApaI	GGGCCC	1 cut(s)	1800
ApeKI	GCWGC	8 cut(s)	1783, 1906, 1977, 2306, 2363, 2399, 3191, 3248
AseI	ATTAAT	1 cut(s)	2088
Asp700I	GAANNNNTTC	2 cut(s)	1229, 2445
AspLEI	GCGC	3 cut(s)	463, 2213, 2239
AspS9I	GGNCC	8 cut(s)	955, 1205, 1330, 1796, 1797, 1882, 2174, 2597
AsuC2I	CCSGG	5 cut(s)	2258, 2273, 2274, 2863, 3108
AsuHPI	GGTGA	5 cut(s)	853, 2272, 2335, 2600, 3068
AsuII	TTCGAA	1 cut(s)	1117
AvaI	CYCGRG	3 cut(s)	67, 456, 2272
AvaII	GGWCC	3 cut(s)	955, 1330, 1882
AxyI	CCTNAGG	1 cut(s)	1184
BaeGI	GKGCMC	3 cut(s)	1524, 1800, 3420
BaeI	ACNNNNGTAYC	2 cut(s)	159, 192
BalI	TGGCCA	1 cut(s)	1532
BanI	GGYRCC	2 cut(s)	3346, 3415
BanII	GRGCYC	1 cut(s)	1800
BarI	GAAGNNNNNNTAC	4 cut(s)	2631, 2663, 3208, 3240
BauI	CACGAG	1 cut(s)	3436
BbsI	GAAGAC	4 cut(s)	995, 2881, 2967, 3104
Bbv12I	GWGCWC	5 cut(s)	618, 1180, 1316, 2431, 3443
BbvCI	CCTCAGC	2 cut(s)	2102, 2214
BbvI	GCAGC	8 cut(s)	1770, 1893, 1989, 2318, 2350, 2386, 3203, 3235
BcgI	CGANNNNNNTGC	2 cut(s)	1008, 1042
BciT130I	CCWGG	4 cut(s)	1492, 1631, 2172, 3054
BciVI	GTATCC	1 cut(s)	2371
BclI	TGATCA	2 cut(s)	1150, 3469
BcnI	CCSGG	5 cut(s)	2258, 2273, 2274, 2863, 3108
BcoDI	GTCTC	7 cut(s)	123, 1014, 2075, 2322, 2823, 2850, 3446
BfaI	CTAG	3 cut(s)	629, 633, 2823
BfmI	CTRYAG	3 cut(s)	2304, 2985, 3189
BfoI	RGCGCY	2 cut(s)	464, 2214
BfuI	GTATCC	1 cut(s)	2371
BglII	AGATCT	1 cut(s)	2300
Bme1390I	CCNGG	9 cut(s)	1492, 1631, 2172, 2258, 2273, 2274, 2863, 3054, 3108
Bme18I	GGWCC	3 cut(s)	955, 1330, 1882
BmeT110I	CYCGRG	3 cut(s)	67, 456, 2272
BmgT120I	GGNCC	8 cut(s)	955, 1205, 1330, 1796, 1797, 1882, 2174, 2597
BmiI	GGNNCC	7 cut(s)	1797, 1798, 1883, 2059, 3152, 3348, 3417
BmrFI	CCNGG	9 cut(s)	1492, 1631, 2172, 2258, 2273, 2274, 2863, 3054, 3108
BmrI	ACTGGG	1 cut(s)	572
BmsI	GCATC	4 cut(s)	1714, 2258, 2619, 3384
BmuI	ACTGGG	1 cut(s)	572
BoxI	GACNNNNGTC	1 cut(s)	1556
BpiI	GAAGAC	4 cut(s)	995, 2881, 2967, 3104
BplI	GAGNNNNNCTC	2 cut(s)	1784, 1816
BpmI	CTGGAG	4 cut(s)	1685, 1811, 2508, 2705
Bpu10I	CCTNAGC	2 cut(s)	2102, 2214
Bpu14I	TTCGAA	1 cut(s)	1117
BpuEI	CTTGAG	6 cut(s)	347, 949, 1919, 1936, 2126, 2950
BpuMI	CCSGG	5 cut(s)	2258, 2273, 2274, 2863, 3108
Bsa29I	ATCGAT	1 cut(s)	309
BsaAI	YACGTR	2 cut(s)	1514, 2479
BsaHI	GRCGYC	1 cut(s)	890
BsaI	GGTCTC	1 cut(s)	2322
BsaJI	CCNNGG	6 cut(s)	2017, 2171, 2185, 2272, 3106, 3359
BsaWI	WCCGGW	2 cut(s)	1236, 3430
Bsc4I	CCNNNNNNNGG	8 cut(s)	964, 1636, 2019, 2278, 2374, 2943, 3036, 3343
Bse1I	ACTGG	7 cut(s)	567, 1658, 1668, 1794, 1942, 1974, 2937
Bse21I	CCTNAGG	1 cut(s)	1184
Bse3DI	GCAATG	4 cut(s)	253, 1134, 2609, 3519
BseBI	CCWGG	4 cut(s)	1492, 1631, 2172, 3054
BseCI	ATCGAT	1 cut(s)	309
BseDI	CCNNGG	6 cut(s)	2017, 2171, 2185, 2272, 3106, 3359
BseLI	CCNNNNNNNGG	8 cut(s)	964, 1636, 2019, 2278, 2374, 2943, 3036, 3343
BseMI	GCAATG	4 cut(s)	253, 1134, 2609, 3519
BseNI	ACTGG	7 cut(s)	567, 1658, 1668, 1794, 1942, 1974, 2937
BseRI	GAGGAG	4 cut(s)	383, 1061, 2202, 2231
BseSI	GKGCMC	3 cut(s)	1524, 1800, 3420
BseXI	GCAGC	8 cut(s)	1770, 1893, 1989, 2318, 2350, 2386, 3203, 3235
BseYI	CCCAGC	1 cut(s)	2570
BsgI	GTGCAG	3 cut(s)	489, 609, 2679
Bsh1236I	CGCG	1 cut(s)	2237
BshFI	GGCC	6 cut(s)	1206, 1532, 1798, 2176, 2599, 3364
BshNI	GGYRCC	2 cut(s)	3346, 3415
BshVI	ATCGAT	1 cut(s)	309
BsiHKAI	GWGCWC	5 cut(s)	618, 1180, 1316, 2431, 3443
BsiHKCI	CYCGRG	3 cut(s)	67, 456, 2272
BsiSI	CCGG	6 cut(s)	1237, 2257, 2273, 2863, 3108, 3431
BslFI	GGGAC	3 cut(s)	1096, 1677, 1895
BslI	CCNNNNNNNGG	8 cut(s)	964, 1636, 2019, 2278, 2374, 2943, 3036, 3343
BsmAI	GTCTC	7 cut(s)	123, 1014, 2075, 2322, 2823, 2850, 3446
BsmBI	CGTCTC	1 cut(s)	2075
BsmFI	GGGAC	3 cut(s)	1096, 1677, 1895
BsmI	GAATGC	3 cut(s)	503, 1594, 2464
BsnI	GGCC	6 cut(s)	1206, 1532, 1798, 2176, 2599, 3364
Bso31I	GGTCTC	1 cut(s)	2322
BsoBI	CYCGRG	3 cut(s)	67, 456, 2272
Bsp119I	TTCGAA	1 cut(s)	1117
Bsp120I	GGGCCC	1 cut(s)	1796
Bsp1286I	GDGCHC	8 cut(s)	618, 1180, 1316, 1524, 1800, 2431, 3420, 3443
Bsp143I	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
Bsp19I	CCATGG	1 cut(s)	3359
BspANI	GGCC	6 cut(s)	1206, 1532, 1798, 2176, 2599, 3364
BspDI	ATCGAT	1 cut(s)	309
BspFNI	CGCG	1 cut(s)	2237
BspHI	TCATGA	2 cut(s)	1006, 1738
BspLI	GGNNCC	7 cut(s)	1797, 1798, 1883, 2059, 3152, 3348, 3417
BspMAI	CTGCAG	2 cut(s)	2308, 3193
BspPI	GGATC	2 cut(s)	1761, 3179
BspT104I	TTCGAA	1 cut(s)	1117
BspT107I	GGYRCC	2 cut(s)	3346, 3415
BspTNI	GGTCTC	1 cut(s)	2322
BsrBI	CCGCTC	1 cut(s)	2890
BsrDI	GCAATG	4 cut(s)	253, 1134, 2609, 3519
BsrI	ACTGG	7 cut(s)	567, 1658, 1668, 1794, 1942, 1974, 2937
BssECI	CCNNGG	6 cut(s)	2017, 2171, 2185, 2272, 3106, 3359
BssMI	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
BssNI	GRCGYC	1 cut(s)	890
BssSI	CACGAG	1 cut(s)	3436
BssT1I	CCWWGG	1 cut(s)	3359
Bst2BI	CACGAG	1 cut(s)	3436
Bst2UI	CCWGG	4 cut(s)	1492, 1631, 2172, 3054
Bst6I	CTCTTC	2 cut(s)	1038, 1114
BstACI	GRCGYC	1 cut(s)	890
BstAPI	GCANNNNNTGC	1 cut(s)	2082
BstBAI	YACGTR	2 cut(s)	1514, 2479
BstBI	TTCGAA	1 cut(s)	1117
BstC8I	GCNNGC	5 cut(s)	618, 1951, 2099, 2397, 2828
BstDSI	CCRYGG	1 cut(s)	3359
BstENI	CCTNNNNNAGG	1 cut(s)	1634
BstFNI	CGCG	1 cut(s)	2237
BstH2I	RGCGCY	2 cut(s)	464, 2214
BstHHI	GCGC	3 cut(s)	463, 2213, 2239
BstKTI	GATC	9 cut(s)	1012, 1153, 1756, 2194, 2303, 2923, 3187, 3242, 3472
BstMAI	GTCTC	7 cut(s)	123, 1014, 2075, 2322, 2823, 2850, 3446
BstMBI	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
BstMWI	GCNNNNNNNGC	8 cut(s)	63, 425, 467, 2082, 2243, 2576, 3092, 3472
BstNI	CCWGG	4 cut(s)	1492, 1631, 2172, 3054
BstNSI	RCATGY	2 cut(s)	999, 1033
BstPAI	GACNNNNGTC	1 cut(s)	1556
BstSCI	CCNGG	9 cut(s)	1490, 1629, 2170, 2256, 2271, 2272, 2861, 3052, 3106
BstSFI	CTRYAG	3 cut(s)	2304, 2985, 3189
BstSLI	GKGCMC	3 cut(s)	1524, 1800, 3420
BstUI	CGCG	1 cut(s)	2237
BstV1I	GCAGC	8 cut(s)	1770, 1893, 1989, 2318, 2350, 2386, 3203, 3235
BstV2I	GAAGAC	4 cut(s)	995, 2881, 2967, 3104
BstX2I	RGATCY	3 cut(s)	1753, 2300, 3184
BstXI	CCANNNNNNTGG	1 cut(s)	3360
BstYI	RGATCY	3 cut(s)	1753, 2300, 3184
Bsu15I	ATCGAT	1 cut(s)	309
Bsu36I	CCTNAGG	1 cut(s)	1184
BsuI	GTATCC	1 cut(s)	2371
BsuRI	GGCC	6 cut(s)	1206, 1532, 1798, 2176, 2599, 3364
BsuTUI	ATCGAT	1 cut(s)	309
BtgI	CCRYGG	1 cut(s)	3359
BtgZI	GCGATG	1 cut(s)	2281
BtsIMutI	CAGTG	5 cut(s)	1255, 1366, 1651, 1967, 2662
Cac8I	GCNNGC	5 cut(s)	618, 1951, 2099, 2397, 2828
CaiI	CAGNNNCTG	1 cut(s)	2455
CciI	TCATGA	2 cut(s)	1006, 1738
CfoI	GCGC	3 cut(s)	463, 2213, 2239
Cfr13I	GGNCC	8 cut(s)	955, 1205, 1330, 1796, 1797, 1882, 2174, 2597
Cfr9I	CCCGGG	1 cut(s)	2272
ClaI	ATCGAT	1 cut(s)	309
CseI	GACGC	2 cut(s)	198, 2231
Csp6I	GTAC	5 cut(s)	168, 805, 1367, 1511, 2916
CspCI	CAANNNNNGTGG	2 cut(s)	1495, 1530
CviQI	GTAC	5 cut(s)	168, 805, 1367, 1511, 2916
DpnI	GATC	9 cut(s)	1011, 1152, 1755, 2193, 2302, 2922, 3186, 3241, 3471
DpnII	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
DraI	TTTAAA	1 cut(s)	346
EaeI	YGGCCR	1 cut(s)	1530
Eam1104I	CTCTTC	2 cut(s)	1038, 1114
EarI	CTCTTC	2 cut(s)	1038, 1114
Eco130I	CCWWGG	1 cut(s)	3359
Eco24I	GRGCYC	1 cut(s)	1800
Eco31I	GGTCTC	1 cut(s)	2322
Eco32I	GATATC	1 cut(s)	3103
Eco47I	GGWCC	3 cut(s)	955, 1330, 1882
Eco57I	CTGAAG	4 cut(s)	843, 1895, 2979, 3497
Eco81I	CCTNAGG	1 cut(s)	1184
Eco88I	CYCGRG	3 cut(s)	67, 456, 2272
EcoNI	CCTNNNNNAGG	1 cut(s)	1634
EcoO109I	RGGNCCY	2 cut(s)	1796, 1797
EcoRI	GAATTC	1 cut(s)	1670
EcoRII	CCWGG	4 cut(s)	1490, 1629, 2170, 3052
EcoRV	GATATC	1 cut(s)	3103
EcoT14I	CCWWGG	1 cut(s)	3359
EcoT38I	GRGCYC	1 cut(s)	1800
ErhI	CCWWGG	1 cut(s)	3359
Esp3I	CGTCTC	1 cut(s)	2075
FalI	AAGNNNNNCTT	2 cut(s)	782, 814
FaqI	GGGAC	3 cut(s)	1096, 1677, 1895
FauI	CCCGC	1 cut(s)	2883
FbaI	TGATCA	2 cut(s)	1150, 3469
FblI	GTMKAC	1 cut(s)	3005
FriOI	GRGCYC	1 cut(s)	1800
FspBI	CTAG	3 cut(s)	629, 633, 2823
GlaI	GCGC	3 cut(s)	462, 2212, 2238
GsaI	CCCAGC	1 cut(s)	2574
GsuI	CTGGAG	4 cut(s)	1685, 1811, 2508, 2705
HaeII	RGCGCY	2 cut(s)	464, 2214
HaeIII	GGCC	6 cut(s)	1206, 1532, 1798, 2176, 2599, 3364
HapII	CCGG	6 cut(s)	1237, 2257, 2273, 2863, 3108, 3431
HgaI	GACGC	2 cut(s)	198, 2231
HhaI	GCGC	3 cut(s)	463, 2213, 2239
Hin1I	GRCGYC	1 cut(s)	890
Hin6I	GCGC	3 cut(s)	461, 2211, 2237
HinP1I	GCGC	3 cut(s)	461, 2211, 2237
HincII	GTYRAC	3 cut(s)	894, 2151, 3006
HindII	GTYRAC	3 cut(s)	894, 2151, 3006
HpaI	GTTAAC	1 cut(s)	2151
HpaII	CCGG	6 cut(s)	1237, 2257, 2273, 2863, 3108, 3431
HphI	GGTGA	5 cut(s)	853, 2272, 2335, 2600, 3068
Hpy166II	GTNNAC	8 cut(s)	894, 1333, 2151, 2326, 2471, 2503, 3006, 3059
Hpy8I	GTNNAC	8 cut(s)	894, 1333, 2151, 2326, 2471, 2503, 3006, 3059
Hpy99I	CGWCG	1 cut(s)	892
HpyCH4IV	ACGT	6 cut(s)	890, 1062, 1513, 1553, 2130, 2478
HpyF10VI	GCNNNNNNNGC	8 cut(s)	63, 425, 467, 2082, 2243, 2576, 3092, 3472
HpySE526I	ACGT	6 cut(s)	890, 1062, 1513, 1553, 2130, 2478
Hsp92I	GRCGYC	1 cut(s)	890
HspAI	GCGC	3 cut(s)	461, 2211, 2237
Ksp22I	TGATCA	2 cut(s)	1150, 3469
KspAI	GTTAAC	1 cut(s)	2151
Kzo9I	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
LmnI	GCTCC	5 cut(s)	206, 1183, 2057, 2489, 3412
Lsp1109I	GCAGC	8 cut(s)	1770, 1893, 1989, 2318, 2350, 2386, 3203, 3235
LweI	GCATC	4 cut(s)	1714, 2258, 2619, 3384
MaeI	CTAG	3 cut(s)	629, 633, 2823
MaeII	ACGT	6 cut(s)	890, 1062, 1513, 1553, 2130, 2478
MaeIII	GTNAC	9 cut(s)	161, 1188, 1250, 1305, 1812, 2405, 2902, 3118, 3433
MalI	GATC	9 cut(s)	1011, 1152, 1755, 2193, 2302, 2922, 3186, 3241, 3471
MbiI	CCGCTC	1 cut(s)	2890
MboI	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
MfeI	CAATTG	3 cut(s)	645, 1317, 1469
MflI	RGATCY	3 cut(s)	1753, 2300, 3184
MhlI	GDGCHC	8 cut(s)	618, 1180, 1316, 1524, 1800, 2431, 3420, 3443
MlsI	TGGCCA	1 cut(s)	1532
MluNI	TGGCCA	1 cut(s)	1532
MlyI	GAGTC	7 cut(s)	316, 527, 847, 1278, 1290, 2957, 3011
MmeI	TCCRAC	4 cut(s)	304, 1260, 2505, 3036
Mox20I	TGGCCA	1 cut(s)	1532
MroXI	GAANNNNTTC	2 cut(s)	1229, 2445
MscI	TGGCCA	1 cut(s)	1532
MslI	CAYNNNNRTG	3 cut(s)	672, 738, 3358
Msp20I	TGGCCA	1 cut(s)	1532
MspA1I	CMGCKG	3 cut(s)	2309, 2521, 3475
MspI	CCGG	6 cut(s)	1237, 2257, 2273, 2863, 3108, 3431
MspR9I	CCNGG	9 cut(s)	1492, 1631, 2172, 2258, 2273, 2274, 2863, 3054, 3108
MunI	CAATTG	3 cut(s)	645, 1317, 1469
Mva1269I	GAATGC	3 cut(s)	503, 1594, 2464
MvaI	CCWGG	4 cut(s)	1492, 1631, 2172, 3054
MvnI	CGCG	1 cut(s)	2237
MwoI	GCNNNNNNNGC	8 cut(s)	63, 425, 467, 2082, 2243, 2576, 3092, 3472
NciI	CCSGG	5 cut(s)	2258, 2273, 2274, 2863, 3108
NcoI	CCATGG	1 cut(s)	3359
NdeII	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
NlaIV	GGNNCC	7 cut(s)	1797, 1798, 1883, 2059, 3152, 3348, 3417
NmuCI	GTSAC	7 cut(s)	161, 1188, 1250, 2405, 2902, 3118, 3433
NspI	RCATGY	2 cut(s)	999, 1033
NspV	TTCGAA	1 cut(s)	1117
PagI	TCATGA	2 cut(s)	1006, 1738
PciI	ACATGT	1 cut(s)	995
PctI	GAATGC	3 cut(s)	503, 1594, 2464
PdmI	GAANNNNTTC	2 cut(s)	1229, 2445
PfeI	GAWTC	8 cut(s)	452, 1726, 1742, 2159, 2452, 2990, 3158, 3322
PflMI	CCANNNNNTGG	2 cut(s)	2943, 3343
PfoI	TCCNGGA	2 cut(s)	1490, 1629
PleI	GAGTC	7 cut(s)	316, 527, 847, 1277, 1290, 2957, 3010
PpsI	GAGTC	7 cut(s)	316, 527, 847, 1277, 1290, 2957, 3010
Ppu21I	YACGTR	2 cut(s)	1514, 2479
PscI	ACATGT	1 cut(s)	995
PshAI	GACNNNNGTC	1 cut(s)	1556
PshBI	ATTAAT	1 cut(s)	2088
PsiI	TTATAA	1 cut(s)	1437
Psp6I	CCWGG	4 cut(s)	1490, 1629, 2170, 3052
PspFI	CCCAGC	1 cut(s)	2570
PspGI	CCWGG	4 cut(s)	1490, 1629, 2170, 3052
PspN4I	GGNNCC	7 cut(s)	1797, 1798, 1883, 2059, 3152, 3348, 3417
PspOMI	GGGCCC	1 cut(s)	1796
PspPI	GGNCC	8 cut(s)	955, 1205, 1330, 1796, 1797, 1882, 2174, 2597
PstI	CTGCAG	2 cut(s)	2308, 3193
PstNI	CAGNNNCTG	1 cut(s)	2455
PsuI	RGATCY	3 cut(s)	1753, 2300, 3184
PvuII	CAGCTG	2 cut(s)	2521, 3475
RsaI	GTAC	5 cut(s)	169, 806, 1368, 1512, 2917
RsaNI	GTAC	5 cut(s)	168, 805, 1367, 1511, 2916
RseI	CAYNNNNRTG	3 cut(s)	672, 738, 3358
SalI	GTCGAC	1 cut(s)	3004
Sau3AI	GATC	9 cut(s)	1009, 1150, 1753, 2191, 2300, 2920, 3184, 3239, 3469
Sau96I	GGNCC	8 cut(s)	955, 1205, 1330, 1796, 1797, 1882, 2174, 2597
SchI	GAGTC	7 cut(s)	316, 527, 847, 1278, 1290, 2957, 3011
ScrFI	CCNGG	9 cut(s)	1492, 1631, 2172, 2258, 2273, 2274, 2863, 3054, 3108
SduI	GDGCHC	8 cut(s)	618, 1180, 1316, 1524, 1800, 2431, 3420, 3443
SfaNI	GCATC	4 cut(s)	1714, 2258, 2619, 3384
SfcI	CTRYAG	3 cut(s)	2304, 2985, 3189
SfuI	TTCGAA	1 cut(s)	1117
SinI	GGWCC	3 cut(s)	955, 1330, 1882
SmaI	CCCGGG	1 cut(s)	2274
SmiMI	CAYNNNNRTG	3 cut(s)	672, 738, 3358
SmlI	CTYRAG	6 cut(s)	326, 928, 1898, 1915, 2141, 2965
SmoI	CTYRAG	6 cut(s)	326, 928, 1898, 1915, 2141, 2965
SrfI	GCCCGGGC	1 cut(s)	2274
SspMI	CTAG	3 cut(s)	629, 633, 2823
StyD4I	CCNGG	9 cut(s)	1490, 1629, 2170, 2256, 2271, 2272, 2861, 3052, 3106
StyI	CCWWGG	1 cut(s)	3359
TaiI	ACGT	6 cut(s)	893, 1065, 1516, 1556, 2133, 2481
TatI	WGTACW	2 cut(s)	804, 1366
TauI	GCSGC	5 cut(s)	66, 387, 2312, 2602, 3379
TfiI	GAWTC	8 cut(s)	452, 1726, 1742, 2159, 2452, 2990, 3158, 3322
TscAI	CASTG	5 cut(s)	1255, 1366, 1658, 1974, 2662
TseFI	GTSAC	7 cut(s)	161, 1188, 1250, 2405, 2902, 3118, 3433
TseI	GCWGC	8 cut(s)	1783, 1906, 1977, 2306, 2363, 2399, 3191, 3248
Tsp45I	GTSAC	7 cut(s)	161, 1188, 1250, 2405, 2902, 3118, 3433
TspGWI	ACGGA	3 cut(s)	1766, 2343, 2698
TspMI	CCCGGG	1 cut(s)	2272
TspRI	CASTG	5 cut(s)	1255, 1366, 1658, 1974, 2662
Van91I	CCANNNNNTGG	2 cut(s)	2943, 3343
VpaK11BI	GGWCC	3 cut(s)	955, 1330, 1882
VspI	ATTAAT	1 cut(s)	2088
XagI	CCTNNNNNAGG	1 cut(s)	1634
XceI	RCATGY	2 cut(s)	999, 1033
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1215, 3409
XmaI	CCCGGG	1 cut(s)	2272
XmiI	GTMKAC	1 cut(s)	3005
XmnI	GAANNNNTTC	2 cut(s)	1229, 2445
XspI	CTAG	3 cut(s)	629, 633, 2823
ZraI	GACGTC	1 cut(s)	891

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.