FvH4_4g22940

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
Physical Location & Seq
Forward (+)
25580270 .. 25584437
4168 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g22940.t1

Sequence Viewer

Length: 2784 bp
ATGGCTGAGGCGGTTGTTTCCTTTGTGGTTGAAAGGCTCGGAGACTTCATCATCCAAGAAGGGGAGTTCTTGTATGGAGTCAACGACCAAGTTGAGCTTGCAAAAACTGAGCTACAGTTGATGCAGGGTTTCCTCAAAGATGCTGATGCAAGACAAGGAGATGATGAAACTGTTCGTATCTGGGTTGCGAAAATTAGAGATGCTGCTTATGATTTGGAAGATGTGGTTGAAACCTATGTGCTGAAAGTGGTGTCCAAGAGGGAAGGTGGTTTTAAGAGTATACTGAAAAGGTTTGGTCGCATGTTCAAGGAAGGAGTTGATCTTCACAAAATTGGGTCGGAAATTCAGAACATTACAACCAATATTTCTACTTTAAGGTCTCGTTTGGAAGCTTACAACATCAGACAGATAAGGGATAGTGGAGGTGTCGCTTCTGTGTATGAGAGGCAGCAACGACTAAGGCGGACATACTCTCATATCGTTGAACATGATGTTGTTGGCCTGGAGCATAGCGTGAAAGAATTGGCCATGCATTTGGTCAGAAGTGGAGACAGCCATCGAGTTGTTTCTATTTGGGGAATGGGCGGTTTGGGGAAAACAACTCTTGCAAAACAGGTTTATCATGATAATGAAGTCAGACAACACTTTGATTGTTTTGCTTGGGTTTGTATATCTCAACGATGTCAAGTACGAGATGTTTGGGAAGAAATCCTTGTCAAAGTTTCTGCTATGCATAGAACAGAGATTTCTCAAATGAATAACGGAGAAATAGCCAAGAAGCTTCATCTTGCACAGCGAGAGAGTAGATGTTTGGTAGTACTTGATGACATATGGAGTGTTGAGACCTGGGAGTCTCTGAAAGCTGCATTTTCACTGTGTGAGAAAACTAAGAGCAGAATATTACTCACCACGCGGAATGAAGAGGTAGCTCTGCATTCAGACAGGAATGGTTTCCTCTTCCAACCTCGACCACTGAATGACCATGAAAGTTGGCAACTGTTGGAGAAGATAGCAATTTTTGGTAGAGATGAAATAGATTCCACAACTTTCACAAGGATGAAAGACCTAGGGAAAAAGATGCTTCAACAATGTGCTGGTCTCCCATTAGCCATTACTGTGCTCGCAGGACTTCTGGCAAGAAAGGAGACAGTTGATGAATGGGATACGGTGCAAACAAATGTTGATGTGTACATTAGAAGAGGCAAAGGCTCTGAACAAGAATACAGAGGAGCATTGTGGGTGCTGGCATTAAGTTATGATGATTTACCATATCACTTAAAACCCTGTTTTCTGTATTTAGGCCATTTTCCTGAAGATTTTGAGATACCGGTGAAAAGATTGACTCAATTATGGATTGCAGAAGGTTTTATATATGCATCACAAGAAAGAATAACAATGGAGGATGTAGCTTATGGCTATTTAAATGAGTTGGTAGAAAGATGTGTGCTACAAATTTCAGAACAGGGTTCTGTAAGAAAGATTAAATCTTGTCATCTTCATGATCTCATGCGAGACTTGTGCTTAGAAAAGGCGAAACAGGAGAACTTTCTCCAGAATGTCAATTTTTCACATCAAAACATGACTTCTATTTCTTCTTCCATGGTAGCCAATGCTGCAGCAACAGTTAAAGTTCGAAGACTTGCAATCTACTTGGATGAGAATGCCGATGAATTGGTTCCATTGAGAAACCACAAAGACAGCCACCTTCGGTCACTACTGTACTTTTACCCAGGATATTATTGGATTCTCAGAAATGAGAAGTTAGTAGAATTGCTGTTTAAGAAGTTCAAATTGCTTCGAGTTTTGAAGCTTGAAGGGTGGAGAACCCCGGTAGAATTGCCGAATGAGATTGGCAACATGGTCCACTTGAGATTTTTGAGTCTGAGTTATAGTCGTATAACAAGGTTTCCATCCTCCTTGGGTAAATTGATATGTTTGCAAACTCTTGATTTGAAGCATTGTGACACCGATGTAATTCCAGATGTGATTTGGAAGATGACAGAACTCAGGCATTTATATTTACCCCTCTATTGGACGGCAAAACCTAAGCTGCGACTGTCTACTCTTCATAACTTACAGACTTTAGATCATGTTTCAAGTCTCTGTTCTGACCTGAATGATCTCTCTGAGTTAAGAAACCTGAGGAAACTGGGGATACGAGTGACAAGCAGCTTGGAAAAACTGGAGGAAACTTTGAAATCAATAAGCAACACAGTTGATGGCATTCGATCTCTGTTTCTGCATAACTTACTTGGAAACGATAGTGGTACGGAGGTTACACAAATACTGTCAGGTTGTCGTAAAATATACAAGTTGGACTTGAATGGACGAACTGTAGAGTTGCCCAATTATCTTCATGACTATCCAAACCTCACGAAGATAACATTGTGTCGTTGTGATCTGAATGACAACCAAATGACAGTGCTAGAGAGGCTGCCAAACCTAAAAACTCTCTGCATTATGGAAGATACTTTCGAGTACCAGAACACAAAGACCCTTGTTTTCTCCAAAGGTGGCTTTGCTCGTCTTGAATGCTTTTCCCTTATCTGCGCGCATGAAATAGTGAATCTGCAGGTGGAGCAAGGAGCCATGCCTAGTCTCTGCCGTTTGTACATTAAACGTTGCTGGGGATTGAAGACAATTCCAGATGGGCTGAGATACGTTACTACCCTCAAGAAACTAACCGTAGAAATGCCTATCTCATTTGTTAGCAGGCTTCAAGTTGGAGGAGAGGATTACTATAAAATCCAACACGTGCCTTCTGTTATACTCACGAGTTACTAG

Protein Analysis

928

Amino Acids

106.85

Weight (kDa)

7.55

Isoelectric Point (pI)

38.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 88 2.3e-25 Rx N-terminal domain
NB-ARC PF00931 169 - 339 5.7e-42 NB-ARC domain
WHD_DRP PF23559 436 - 507 8.9e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 591 - 900 7.3e-40 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2563
AasI GACNNNNNNGTC 1 cut(s) 850
Acc36I ACCTGC 1 cut(s) 2563
AccI GTMKAC 2 cut(s) 280, 2060
AccII CGCG 2 cut(s) 913, 2552
AciI CCGC 4 cut(s) 11, 463, 585, 913
AclI AACGTT 1 cut(s) 2620
AcoI YGGCCR 1 cut(s) 525
AcsI RAATTY 2 cut(s) 342, 1452
AcuI CTGAAG 1 cut(s) 1332
AcvI CACGTG 1 cut(s) 2755
AdeI CACNNNGTG 1 cut(s) 878
AfaI GTAC 7 cut(s) 690, 819, 1190, 1721, 2269, 2480, 2612
AfiI CCNNNNNNNGG 2 cut(s) 61, 2031
AflIII ACRYGT 1 cut(s) 2752
AgeI ACCGGT 1 cut(s) 1327
AjnI CCWGG 3 cut(s) 501, 845, 1729
Alw21I GWGCWC 1 cut(s) 1122
AoxI GGCC 3 cut(s) 499, 525, 1300
ApeKI GCWGC 8 cut(s) 203, 448, 863, 1613, 1616, 2050, 2169, 2434
ApoI RAATTY 2 cut(s) 342, 1452
AsiGI ACCGGT 1 cut(s) 1327
Asp700I GAANNNNTTC 3 cut(s) 171, 950, 1674
AspA2I CCTAGG 1 cut(s) 1066
AspLEI GCGC 2 cut(s) 2552, 2554
AspS9I GGNCC 1 cut(s) 1861
AsuC2I CCSGG 1 cut(s) 1829
AsuHPI GGTGA 2 cut(s) 898, 1342
AsuII TTCGAA 1 cut(s) 1633
AvaII GGWCC 1 cut(s) 1861
AvrII CCTAGG 1 cut(s) 1066
AxyI CCTNAGG 1 cut(s) 2141
BaeI ACNNNNGTAYC 2 cut(s) 2259, 2292
BalI TGGCCA 1 cut(s) 527
BauI CACGAG 1 cut(s) 2773
BbrPI CACGTG 1 cut(s) 2755
BbsI GAAGAC 2 cut(s) 1642, 2642
Bbv12I GWGCWC 1 cut(s) 1122
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 8 cut(s) 190, 460, 850, 1600, 1628, 2037, 2181, 2421
BccI CCATC 4 cut(s) 564, 1918, 2213, 2642
BceAI ACGGC 2 cut(s) 2052, 2589
BcgI CGANNNNNNTGC 2 cut(s) 1500, 1534
BciT130I CCWGG 3 cut(s) 503, 847, 1731
BciVI GTATCC 2 cut(s) 1156, 2148
BcnI CCSGG 1 cut(s) 1829
BfaI CTAG 4 cut(s) 1067, 2426, 2595, 2782
BfmI CTRYAG 4 cut(s) 113, 1614, 2334, 2570
BfuAI ACCTGC 1 cut(s) 2563
BfuI GTATCC 2 cut(s) 1156, 2148
BisI GCNGC 8 cut(s) 204, 449, 864, 1614, 1617, 2051, 2170, 2435
BlnI CCTAGG 1 cut(s) 1066
BlsI GCNGC 8 cut(s) 205, 450, 865, 1615, 1618, 2052, 2171, 2436
BmcAI AGTACT 1 cut(s) 819
Bme1390I CCNGG 4 cut(s) 503, 847, 1731, 1829
Bme18I GGWCC 1 cut(s) 1861
BmgT120I GGNCC 1 cut(s) 1861
BmiI GGNNCC 2 cut(s) 1677, 2587
BmrFI CCNGG 4 cut(s) 503, 847, 1731, 1829
BmrI ACTGGG 1 cut(s) 2159
BmsI GCATC 6 cut(s) 111, 130, 136, 190, 1068, 1385
BmuI ACTGGG 1 cut(s) 2159
BpiI GAAGAC 2 cut(s) 1642, 2642
BpmI CTGGAG 3 cut(s) 524, 1535, 2204
Bpu10I CCTNAGC 2 cut(s) 6, 2046
Bpu14I TTCGAA 1 cut(s) 1633
BpuEI CTTGAG 2 cut(s) 1888, 2657
BpuMI CCSGG 1 cut(s) 1829
BsaAI YACGTR 1 cut(s) 2755
BsaI GGTCTC 3 cut(s) 384, 836, 1103
BsaJI CCNNGG 6 cut(s) 846, 1066, 1599, 1729, 1827, 1917
BsaWI WCCGGW 1 cut(s) 1327
BsaXI ACNNNNNCTCC 2 cut(s) 56, 86
Bsc4I CCNNNNNNNGG 2 cut(s) 61, 2031
Bse118I RCCGGY 1 cut(s) 1327
Bse1I ACTGG 2 cut(s) 2154, 2187
Bse21I CCTNAGG 1 cut(s) 2141
BseBI CCWGG 3 cut(s) 503, 847, 1731
BseDI CCNNGG 6 cut(s) 846, 1066, 1599, 1729, 1827, 1917
BseGI GGATG 5 cut(s) 51, 1062, 1408, 1660, 1910
BseLI CCNNNNNNNGG 2 cut(s) 61, 2031
BseMII CTCAG 7 cut(s) 99, 1762, 1874, 2020, 2118, 2132, 2645
BseNI ACTGG 2 cut(s) 2154, 2187
BsePI GCGCGC 1 cut(s) 2550
BseRI GAGGAG 2 cut(s) 1242, 2742
BseXI GCAGC 8 cut(s) 190, 460, 850, 1600, 1628, 2037, 2181, 2421
BseYI CCCAGC 1 cut(s) 2625
Bsh1236I CGCG 2 cut(s) 913, 2552
BshFI GGCC 3 cut(s) 501, 527, 1302
BshTI ACCGGT 1 cut(s) 1327
BsiHKAI GWGCWC 1 cut(s) 1122
BsiSI CCGG 2 cut(s) 1328, 1829
BslI CCNNNNNNNGG 2 cut(s) 61, 2031
BsmI GAATGC 4 cut(s) 934, 1666, 2223, 2537
BsnI GGCC 3 cut(s) 501, 527, 1302
Bso31I GGTCTC 3 cut(s) 384, 836, 1103
Bsp119I TTCGAA 1 cut(s) 1633
Bsp1286I GDGCHC 1 cut(s) 1122
Bsp1407I TGTACA 2 cut(s) 1188, 2610
Bsp143I GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
Bsp19I CCATGG 1 cut(s) 1599
BspACI CCGC 4 cut(s) 11, 463, 585, 913
BspANI GGCC 3 cut(s) 501, 527, 1302
BspCNI CTCAG 7 cut(s) 100, 1761, 1875, 2019, 2119, 2133, 2646
BspFNI CGCG 2 cut(s) 913, 2552
BspHI TCATGA 3 cut(s) 622, 1498, 2356
BspLI GGNNCC 2 cut(s) 1677, 2587
BspMAI CTGCAG 2 cut(s) 1618, 2574
BspMI ACCTGC 1 cut(s) 2563
BspT104I TTCGAA 1 cut(s) 1633
BspTNI GGTCTC 3 cut(s) 384, 836, 1103
BsrFI RCCGGY 1 cut(s) 1327
BsrGI TGTACA 2 cut(s) 1188, 2610
BsrI ACTGG 2 cut(s) 2154, 2187
BssAI RCCGGY 1 cut(s) 1327
BssECI CCNNGG 6 cut(s) 846, 1066, 1599, 1729, 1827, 1917
BssHII GCGCGC 1 cut(s) 2550
BssMI GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
BssNAI GTATAC 1 cut(s) 281
BssSI CACGAG 1 cut(s) 2773
BssT1I CCWWGG 3 cut(s) 1066, 1599, 1917
Bst1107I GTATAC 1 cut(s) 281
Bst2BI CACGAG 1 cut(s) 2773
Bst2UI CCWGG 3 cut(s) 503, 847, 1731
Bst6I CTCTTC 4 cut(s) 915, 962, 1192, 2070
BstAUI TGTACA 2 cut(s) 1188, 2610
BstBAI YACGTR 1 cut(s) 2755
BstBI TTCGAA 1 cut(s) 1633
BstC8I GCNNGC 5 cut(s) 99, 1122, 1245, 2552, 2714
BstDSI CCRYGG 1 cut(s) 1599
BstF5I GGATG 5 cut(s) 51, 1062, 1408, 1660, 1910
BstFNI CGCG 2 cut(s) 913, 2552
BstHHI GCGC 2 cut(s) 2552, 2554
BstKTI GATC 6 cut(s) 322, 1504, 2089, 2122, 2231, 2401
BstMBI GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
BstMWI GCNNNNNNNGC 3 cut(s) 1613, 2431, 2578
BstNI CCWGG 3 cut(s) 503, 847, 1731
BstNSI RCATGY 1 cut(s) 304
BstSCI CCNGG 4 cut(s) 501, 845, 1729, 1827
BstSFI CTRYAG 4 cut(s) 113, 1614, 2334, 2570
BstUI CGCG 2 cut(s) 913, 2552
BstV1I GCAGC 8 cut(s) 190, 460, 850, 1600, 1628, 2037, 2181, 2421
BstV2I GAAGAC 2 cut(s) 1642, 2642
BstXI CCANNNNNNTGG 1 cut(s) 535
BstZ17I GTATAC 1 cut(s) 281
Bsu36I CCTNAGG 1 cut(s) 2141
BsuI GTATCC 2 cut(s) 1156, 2148
BsuRI GGCC 3 cut(s) 501, 527, 1302
BtgI CCRYGG 1 cut(s) 1599
BtsCI GGATG 5 cut(s) 51, 1062, 1408, 1660, 1910
BtsIMutI CAGTG 3 cut(s) 872, 971, 2427
BveI ACCTGC 1 cut(s) 2563
Cac8I GCNNGC 5 cut(s) 99, 1122, 1245, 2552, 2714
CciI TCATGA 3 cut(s) 622, 1498, 2356
CfoI GCGC 2 cut(s) 2552, 2554
Cfr10I RCCGGY 1 cut(s) 1327
Cfr13I GGNCC 1 cut(s) 1861
Csp6I GTAC 7 cut(s) 689, 818, 1189, 1720, 2268, 2479, 2611
CspAI ACCGGT 1 cut(s) 1327
CviQI GTAC 7 cut(s) 689, 818, 1189, 1720, 2268, 2479, 2611
DpnI GATC 6 cut(s) 321, 1503, 2088, 2121, 2230, 2400
DpnII GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
DraI TTTAAA 1 cut(s) 1422
DraIII CACNNNGTG 1 cut(s) 878
DrdI GACNNNNNNGTC 1 cut(s) 850
DseDI GACNNNNNNGTC 1 cut(s) 850
EaeI YGGCCR 1 cut(s) 525
Eam1104I CTCTTC 4 cut(s) 915, 962, 1192, 2070
EarI CTCTTC 4 cut(s) 915, 962, 1192, 2070
EciI GGCGGA 1 cut(s) 478
Eco130I CCWWGG 3 cut(s) 1066, 1599, 1917
Eco31I GGTCTC 3 cut(s) 384, 836, 1103
Eco47I GGWCC 1 cut(s) 1861
Eco57I CTGAAG 1 cut(s) 1332
Eco72I CACGTG 1 cut(s) 2755
Eco81I CCTNAGG 1 cut(s) 2141
EcoRII CCWGG 3 cut(s) 501, 845, 1729
EcoT14I CCWWGG 3 cut(s) 1066, 1599, 1917
EcoT22I ATGCAT 3 cut(s) 534, 735, 1378
ErhI CCWWGG 3 cut(s) 1066, 1599, 1917
FalI AAGNNNNNCTT 6 cut(s) 81, 113, 696, 728, 2303, 2335
FauNDI CATATG 1 cut(s) 830
FblI GTMKAC 2 cut(s) 280, 2060
Fnu4HI GCNGC 8 cut(s) 204, 449, 864, 1614, 1617, 2051, 2170, 2435
FokI GGATG 5 cut(s) 38, 1069, 1415, 1667, 1897
Fsp4HI GCNGC 8 cut(s) 204, 449, 864, 1614, 1617, 2051, 2170, 2435
FspBI CTAG 4 cut(s) 1067, 2426, 2595, 2782
GlaI GCGC 2 cut(s) 2551, 2553
GluI GCNGC 8 cut(s) 204, 449, 864, 1614, 1617, 2051, 2170, 2435
GsaI CCCAGC 1 cut(s) 2629
GsuI CTGGAG 3 cut(s) 524, 1535, 2204
HaeIII GGCC 3 cut(s) 501, 527, 1302
HapII CCGG 2 cut(s) 1328, 1829
HhaI GCGC 2 cut(s) 2552, 2554
Hin6I GCGC 2 cut(s) 2550, 2552
HinP1I GCGC 2 cut(s) 2550, 2552
HincII GTYRAC 1 cut(s) 82
HindII GTYRAC 1 cut(s) 82
HindIII AAGCTT 3 cut(s) 390, 779, 1808
HinfI GANTC 7 cut(s) 78, 851, 1037, 1342, 1744, 1879, 2566
HpaII CCGG 2 cut(s) 1328, 1829
HphI GGTGA 2 cut(s) 898, 1342
Hpy166II GTNNAC 5 cut(s) 82, 281, 1189, 1864, 2061
Hpy8I GTNNAC 5 cut(s) 82, 281, 1189, 1864, 2061
HpyAV CCTTC 7 cut(s) 53, 257, 305, 1355, 1715, 1808, 2769
HpyCH4IV ACGT 3 cut(s) 2620, 2661, 2754
HpyF10VI GCNNNNNNNGC 3 cut(s) 1613, 2431, 2578
HpySE526I ACGT 3 cut(s) 2620, 2661, 2754
HspAI GCGC 2 cut(s) 2550, 2552
Kzo9I GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
LmnI GCTCC 4 cut(s) 505, 1229, 2578, 2585
Lsp1109I GCAGC 8 cut(s) 190, 460, 850, 1600, 1628, 2037, 2181, 2421
LweI GCATC 6 cut(s) 111, 130, 136, 190, 1068, 1385
MaeI CTAG 4 cut(s) 1067, 2426, 2595, 2782
MaeII ACGT 3 cut(s) 2620, 2661, 2754
MaeIII GTNAC 6 cut(s) 1710, 1961, 2161, 2275, 2662, 2777
MalI GATC 6 cut(s) 321, 1503, 2088, 2121, 2230, 2400
MboI GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
MhlI GDGCHC 1 cut(s) 1122
MlsI TGGCCA 1 cut(s) 527
MluNI TGGCCA 1 cut(s) 527
MlyI GAGTC 4 cut(s) 87, 860, 1336, 1888
MmeI TCCRAC 6 cut(s) 318, 981, 985, 2295, 2704, 2773
Mox20I TGGCCA 1 cut(s) 527
Mph1103I ATGCAT 3 cut(s) 534, 735, 1378
MroXI GAANNNNTTC 3 cut(s) 171, 950, 1674
MscI TGGCCA 1 cut(s) 527
MslI CAYNNNNRTG 4 cut(s) 627, 1055, 1115, 1497
Msp20I TGGCCA 1 cut(s) 527
MspI CCGG 2 cut(s) 1328, 1829
MspR9I CCNGG 4 cut(s) 503, 847, 1731, 1829
Mva1269I GAATGC 4 cut(s) 934, 1666, 2223, 2537
MvaI CCWGG 3 cut(s) 503, 847, 1731
MvnI CGCG 2 cut(s) 913, 2552
MwoI GCNNNNNNNGC 3 cut(s) 1613, 2431, 2578
NciI CCSGG 1 cut(s) 1829
NcoI CCATGG 1 cut(s) 1599
NdeI CATATG 1 cut(s) 830
NdeII GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
NlaIV GGNNCC 2 cut(s) 1677, 2587
NmuCI GTSAC 3 cut(s) 1710, 1961, 2161
NsiI ATGCAT 3 cut(s) 534, 735, 1378
NspI RCATGY 1 cut(s) 304
NspV TTCGAA 1 cut(s) 1633
PagI TCATGA 3 cut(s) 622, 1498, 2356
PaqCI CACCTGC 1 cut(s) 2563
PauI GCGCGC 1 cut(s) 2550
PctI GAATGC 4 cut(s) 934, 1666, 2223, 2537
PdmI GAANNNNTTC 3 cut(s) 171, 950, 1674
PfeI GAWTC 3 cut(s) 1037, 1744, 2566
PinAI ACCGGT 1 cut(s) 1327
PkrI GCNGC 8 cut(s) 205, 450, 865, 1615, 1618, 2052, 2171, 2436
PleI GAGTC 4 cut(s) 86, 859, 1336, 1887
PmaCI CACGTG 1 cut(s) 2755
PmlI CACGTG 1 cut(s) 2755
PpsI GAGTC 4 cut(s) 86, 859, 1336, 1887
Ppu21I YACGTR 1 cut(s) 2755
Psp1406I AACGTT 1 cut(s) 2620
Psp6I CCWGG 3 cut(s) 501, 845, 1729
PspCI CACGTG 1 cut(s) 2755
PspFI CCCAGC 1 cut(s) 2625
PspGI CCWGG 3 cut(s) 501, 845, 1729
PspN4I GGNNCC 2 cut(s) 1677, 2587
PspPI GGNCC 1 cut(s) 1861
PstI CTGCAG 2 cut(s) 1618, 2574
PteI GCGCGC 1 cut(s) 2550
RsaI GTAC 7 cut(s) 690, 819, 1190, 1721, 2269, 2480, 2612
RsaNI GTAC 7 cut(s) 689, 818, 1189, 1720, 2268, 2479, 2611
RseI CAYNNNNRTG 4 cut(s) 627, 1055, 1115, 1497
SatI GCNGC 8 cut(s) 204, 449, 864, 1614, 1617, 2051, 2170, 2435
Sau3AI GATC 6 cut(s) 319, 1501, 2086, 2119, 2228, 2398
Sau96I GGNCC 1 cut(s) 1861
ScaI AGTACT 1 cut(s) 819
SchI GAGTC 4 cut(s) 87, 860, 1336, 1888
ScrFI CCNGG 4 cut(s) 503, 847, 1731, 1829
SduI GDGCHC 1 cut(s) 1122
SfaNI GCATC 6 cut(s) 111, 130, 136, 190, 1068, 1385
SfcI CTRYAG 4 cut(s) 113, 1614, 2334, 2570
SfuI TTCGAA 1 cut(s) 1633
SinI GGWCC 1 cut(s) 1861
SmiI ATTTAAAT 1 cut(s) 1422
SmiMI CAYNNNNRTG 4 cut(s) 627, 1055, 1115, 1497
SmlI CTYRAG 2 cut(s) 1867, 2672
SmoI CTYRAG 2 cut(s) 1867, 2672
SsiI CCGC 4 cut(s) 11, 463, 585, 913
SspI AATATT 2 cut(s) 364, 900
SspMI CTAG 4 cut(s) 1067, 2426, 2595, 2782
StyD4I CCNGG 4 cut(s) 501, 845, 1729, 1827
StyI CCWWGG 3 cut(s) 1066, 1599, 1917
SwaI ATTTAAAT 1 cut(s) 1422
TaiI ACGT 3 cut(s) 2623, 2664, 2757
TaqI TCGA 6 cut(s) 559, 967, 1633, 1798, 2227, 2475
TaqII GACCGA 1 cut(s) 1698
TatI WGTACW 4 cut(s) 817, 1188, 1719, 2610
TfiI GAWTC 3 cut(s) 1037, 1744, 2566
TscAI CASTG 3 cut(s) 879, 978, 2427
TseFI GTSAC 3 cut(s) 1710, 1961, 2161
TseI GCWGC 8 cut(s) 203, 448, 863, 1613, 1616, 2050, 2169, 2434
Tsp45I GTSAC 3 cut(s) 1710, 1961, 2161
TspGWI ACGGA 2 cut(s) 777, 2285
TspRI CASTG 3 cut(s) 879, 978, 2427
VpaK11BI GGWCC 1 cut(s) 1861
XapI RAATTY 2 cut(s) 342, 1452
XceI RCATGY 1 cut(s) 304
XcmI CCANNNNNNNNNTGG 2 cut(s) 1737, 1986
XmaJI CCTAGG 1 cut(s) 1066
XmiI GTMKAC 2 cut(s) 280, 2060
XmnI GAANNNNTTC 3 cut(s) 171, 950, 1674
XspI CTAG 4 cut(s) 1067, 2426, 2595, 2782
ZrmI AGTACT 1 cut(s) 819
Zsp2I ATGCAT 3 cut(s) 534, 735, 1378
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.