Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4A

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

60323648 .. 60328866

Gene Structure 5219 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4AG289700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2781 bp

ATGGCTGAGGCGGTAGTTTCCTTTGTGGTTGAAAGGCTGGGAGACTTCATCATCCAAGAAGGGAAGTTCTTGTATGGAGTCAGCGATCAAGTTGAGCTTGCACAAACTGAGCTACAATTAATGAAGGGTTTCCTCAAAGATGCTGATGCAAGACAAGGAGATAATGAAATTGTTCGTATCTGCGTAGCAAAAATCAGAGAGGCTGCTTATGATTTGGAAGATGTCATTGAAATCTATGCCTTGAAAGTGGCCTGCAAGAGGGAGGGACGTATTAAGAGTGTGCTCAAGAGGTTTGGTTGCATGTTGAAGGAAGGAGTTGATCTCCACAAGATTGGGGCGGAAATCCGAGTCATCACCACCAATATTTCTGATCTGAGGTTGCGTTTGCAAACTTACAACATTAGAGAACTAAGGGAGAGTACTGAAGGTGTCACTTCTGTGTATGAGAGGCAGCAACAACTCAGGCGAACTTATTCTCATATAATCGATCGTGATGTTGTTGGGTTGGAGGAGAGCGTGAGAGAATTGGCTGTGCATTTGGTTAAGAGTGGAGACAGACACCGAGTTGTTTCTATTTGGGGGATGGGGGGGTTGGGGAAAACAACTCTTGCAAAACAGGTGTATCATGATAGAGAAGTTCGCCAGCACTTTGATTCTTTTGCTTGGGTTTGCATATCTCAACGATGTCAAGTAAGAGACGTTTGGGAAGAGATCTTGATTAAAGTTTCTGCCCTGCAAAGAGAAGAGATTGCAAAAATGAAGGATGGTGAAATAGCCAAGAAGCTTTTTCTTGTACAGCAACAGAGTAAATGTTTGGTAGTAATTGATGACATATGGAGTGGGACATGGGACACTCTGAAAGCTGCATTTCCTTTGTGTGAGGAAACCAAGAGTAGAATATTACTCACCACTCGCAACGAAGAAGTAGCTTTGCATTCAGATAAAAGTGGTTTCCTCTTCCGGCCTCCAAAACTAAATGATGATGAAAGTTGGCAACTGTTCGAGAAGATAGCAATATTTGGAAGAGATGAAATAAATTCTGGAATCTCTACAAGGAAGAAAGATTTAGGAAAGAAGATGCTTCAGTACTGTGCAGGTTTGCCATTAGCCATCACTGTGCTCGCAGGACTTCTTGCAATAAAGGACACAATTGATGAGTGGGATATGGTGTATAAAAATGTTCATATATACATTGGAAAAGGAAAAGGCCACGAACAAGAATGCAGCGGTGCATCGTGGGTGTTGGCATTGAGTTATGATGACTTACCATATCACTTAAAACCATGCTTTCTGTATTTAGGTAATTTTCCTGAAGATTCTGATATACCAGTGAAAAAATTGACTCAATTATGGATAGCAGAAGGTTTTATATCCGCATCACATGAGACAATGGAGGATGCAGCATACGGCTATTTAACTGAGCTGGTAGCAAGATGTGTGGTACAAATTGGGGAACAGGGTTCATTTAGAAAGATTAAATCTTGTCATCTTCATGATCTCATGCGAGACGTGTGCTTAGAAAAGGCGAAAGAGGAGAACTTTCTCCAGAATGTCGATTTTTCACATCAAAACAGGACTCCTGTTTCTTCTTCCATGGTCACCAATGCTACAGCAACGGTTAAAGTTCGAAGACTTGCAATTTATTTGAATCGTAAGGTTGATGAATTGGTTCCATTGAGAAACCATAAAGACAGCCACCTTCGGTCTCTATTGTACTTTGCCCCAGATCTGTGCTATCTGAAAGATAAGAAATTAGTAAGATCGTTGGTTAAGAAGTTCAAATTGCTTCGAGTTTTGAAGCTTGAAGGTATGATAACATCAGTAGAACTGCCGAATGAGATTGGCAACATGGTCCACTTAAGATTTTTGAGTCTGTGGCATACTGCTATAACAAGGCTTCCATCCTCCCTCGGTAAATTGATCTGTTTGCAAACTCTTAATTTAAAGTATTGTCAGTGTGAGGTAGTTCCAAATGTGATTTGGAAGATGGAACAACTGAGGCATTTGTATTTACCCATGAATTGGACCTCACATCCAAAATTGCAACTGTCTACTCTTCGCAATCTGCAGACTTTAGATCATGTTTCAAGTCTCTGTTCTGACCTGAATGATCTCTCTGAGTTAAGAAACCTGAGGAAACTGGGGATACGAGTGACAAGCAGCTTGGAAAAGTTGGAGGAAATTTTGAAATCTATAAGCAGCACACTTGATGGCATTCGATCTCTCTCTGTGGAGAATTTGCTTGGAACTGACAGTGGTACAGAGGTTACACAAATAGTGTTGAGTTGTCGTCATATATACAAGTTGAATTTGGTTGGGCGAACTGTAGAGTTGCCAAAAGATCTTCATGACTATCCAAACCTCACAAAGATAACATTGGCTCGCTGTGATCTCAAGGACAATCAAATGGCTGTGCTAGAGAAGCTGCCACACCTAAAGGCTCTTTGCGTGATGGGAAGGACTTTCGAGTACGAGACTACAGAGACACTTGTTTTCTCCAGAGGTGGCTTTCCTCATCTTGAATGTCTTTCACTTATTTGCGCAGTCGAAGTAAAGGACTTGAAGGTGGAAGAAGGGACCATGCCTAGGCTCTGCCGTTTGTACATAAAATATTGCCGCAATTTGAACACAATTCCAGACGGGCTGAGATATGTTACTAGCCTCAAGAAACTAACCGTAGCAATGCCTAGATCATTCATTAGCAGGCTTCAAGTTGGAGGAGAGGATTACTATAAAATCCAGCACGTGCCTTCTGTTGTTGTACTCACGAGATATGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

926

Amino Acids

105.88

Weight (kDa)

8.51

Isoelectric Point (pI)

38.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	5 - 88	7.1e-23	Rx N-terminal domain
NB-ARC	PF00931	170 - 339	2.2e-41	NB-ARC domain
WHD_DRP	PF23559	436 - 504	3.6e-17	Disease resistance protein Winged helix domain
LRR_14	PF23598	566 - 897	2.2e-40	Leucine-rich repeat region

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Image

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc16I	TGCGCA	1 cut(s)	2542
Acc36I	ACCTGC	1 cut(s)	1085
AccB7I	CCANNNNNTGG	1 cut(s)	2022
AccI	GTMKAC	1 cut(s)	2051
AciI	CCGC	5 cut(s)	11, 338, 1227, 1374, 2617
AcsI	RAATTY	4 cut(s)	1036, 2181, 2236, 2308
AcuI	CTGAAG	3 cut(s)	444, 1067, 1332
AcvI	CACGTG	1 cut(s)	2746
AfaI	GTAC	9 cut(s)	421, 795, 1088, 1443, 1715, 2260, 2471, 2603, 2763
AfiI	CCNNNNNNNGG	3 cut(s)	258, 2022, 2586
AflII	CTTAAG	1 cut(s)	1858
AflIII	ACRYGT	1 cut(s)	1509
AjiI	CACGTC	1 cut(s)	1510
AleI	CACNNNNGTG	1 cut(s)	437
AluBI	AGCT	9 cut(s)	97, 112, 784, 863, 929, 1423, 1801, 2163, 2425
AluI	AGCT	9 cut(s)	97, 112, 784, 863, 929, 1423, 1801, 2163, 2425
Alw21I	GWGCWC	2 cut(s)	285, 1122
Alw26I	GTCTC	9 cut(s)	36, 546, 690, 1379, 1500, 1710, 2096, 2468, 2477
AoxI	GGCC	3 cut(s)	249, 962, 1207
ApeKI	GCWGC	8 cut(s)	203, 451, 863, 1224, 1400, 2160, 2199, 2425
ApoI	RAATTY	4 cut(s)	1036, 2181, 2236, 2308
AseI	ATTAAT	1 cut(s)	119
Asp700I	GAANNNNTTC	4 cut(s)	128, 171, 472, 1668
AspA2I	CCTAGG	1 cut(s)	2585
AspLEI	GCGC	1 cut(s)	2543
AspS9I	GGNCC	3 cut(s)	1852, 2025, 2577
AsuHPI	GGTGA	4 cut(s)	346, 779, 898, 1591
AsuII	TTCGAA	1 cut(s)	1627
AvaII	GGWCC	3 cut(s)	1852, 2025, 2577
AvrII	CCTAGG	1 cut(s)	2585
AxyI	CCTNAGG	1 cut(s)	2132
BaeI	ACNNNNGTAYC	4 cut(s)	605, 638, 2250, 2283
BauI	CACGAG	1 cut(s)	2767
BbrPI	CACGTG	1 cut(s)	2746
BbsI	GAAGAC	1 cut(s)	1636
Bbv12I	GWGCWC	2 cut(s)	285, 1122
BbvCI	CCTCAGC	1 cut(s)	6
BbvI	GCAGC	8 cut(s)	190, 463, 850, 1236, 1412, 2172, 2211, 2412
BccI	CCATC	7 cut(s)	577, 758, 1118, 1909, 1981, 2204, 2446
BceAI	ACGGC	2 cut(s)	1423, 2580
BcgI	CGANNNNNNTGC	2 cut(s)	1494, 1528
BciVI	GTATCC	1 cut(s)	2139
BcoDI	GTCTC	9 cut(s)	36, 546, 690, 1379, 1500, 1710, 2096, 2468, 2477
BfaI	CTAG	5 cut(s)	2417, 2586, 2658, 2688, 2779
BfmI	CTRYAG	4 cut(s)	1608, 2066, 2325, 2478
BfrI	CTTAAG	1 cut(s)	1858
BfuAI	ACCTGC	1 cut(s)	1085
BfuI	GTATCC	1 cut(s)	2139
BglII	AGATCT	3 cut(s)	711, 1726, 2341
BisI	GCNGC	9 cut(s)	204, 452, 864, 1225, 1401, 2161, 2200, 2426, 2617
BlnI	CCTAGG	1 cut(s)	2585
BlsI	GCNGC	9 cut(s)	205, 453, 865, 1226, 1402, 2162, 2201, 2427, 2618
BmcAI	AGTACT	2 cut(s)	421, 1088
Bme18I	GGWCC	3 cut(s)	1852, 2025, 2577
BmgBI	CACGTC	1 cut(s)	1510
BmgT120I	GGNCC	3 cut(s)	1852, 2025, 2577
BmiI	GGNNCC	2 cut(s)	1671, 2578
BmrI	ACTGGG	1 cut(s)	2150
BmsI	GCATC	6 cut(s)	130, 136, 1068, 1241, 1385, 1387
BmuI	ACTGGG	1 cut(s)	2150
BpiI	GAAGAC	1 cut(s)	1636
BplI	GAGNNNNNCTC	2 cut(s)	306, 338
BpmI	CTGGAG	2 cut(s)	1529, 2482
Bpu10I	CCTNAGC	1 cut(s)	6
Bpu14I	TTCGAA	1 cut(s)	1627
BpuEI	CTTGAG	3 cut(s)	269, 2378, 2648
Bsa29I	ATCGAT	1 cut(s)	486
BsaAI	YACGTR	1 cut(s)	2746
BsaI	GGTCTC	1 cut(s)	1710
BsaJI	CCNNGG	3 cut(s)	1593, 1909, 2585
Bsc4I	CCNNNNNNNGG	3 cut(s)	258, 2022, 2586
Bse1I	ACTGG	2 cut(s)	1328, 2145
Bse21I	CCTNAGG	1 cut(s)	2132
Bse3DI	GCAATG	1 cut(s)	2688
BseCI	ATCGAT	1 cut(s)	486
BseDI	CCNNGG	3 cut(s)	1593, 1909, 2585
BseGI	GGATG	6 cut(s)	51, 588, 769, 1402, 1901, 2032
BseLI	CCNNNNNNNGG	3 cut(s)	258, 2022, 2586
BseMI	GCAATG	1 cut(s)	2688
BseMII	CTCAG	8 cut(s)	99, 365, 475, 1410, 1988, 2109, 2123, 2636
BseNI	ACTGG	2 cut(s)	1328, 2145
BseRI	GAGGAG	3 cut(s)	524, 1547, 2733
BseXI	GCAGC	8 cut(s)	190, 463, 850, 1236, 1412, 2172, 2211, 2412
BseYI	CCCAGC	1 cut(s)	37
BsgI	GTGCAG	1 cut(s)	1113
Bsh1285I	CGRYCG	1 cut(s)	490
BshFI	GGCC	3 cut(s)	251, 964, 1209
BshVI	ATCGAT	1 cut(s)	486
BsiEI	CGRYCG	1 cut(s)	490
BsiHKAI	GWGCWC	2 cut(s)	285, 1122
BsiSI	CCGG	1 cut(s)	961
BslFI	GGGAC	4 cut(s)	279, 856, 863, 2590
BslI	CCNNNNNNNGG	3 cut(s)	258, 2022, 2586
BsmAI	GTCTC	9 cut(s)	36, 546, 690, 1379, 1500, 1710, 2096, 2468, 2477
BsmBI	CGTCTC	2 cut(s)	690, 1500
BsmFI	GGGAC	4 cut(s)	279, 856, 863, 2590
BsmI	GAATGC	3 cut(s)	934, 1226, 2214
BsnI	GGCC	3 cut(s)	251, 964, 1209
Bso31I	GGTCTC	1 cut(s)	1710
Bsp119I	TTCGAA	1 cut(s)	1627
Bsp1286I	GDGCHC	2 cut(s)	285, 1122
Bsp1407I	TGTACA	2 cut(s)	793, 2601
Bsp19I	CCATGG	1 cut(s)	1593
BspACI	CCGC	5 cut(s)	11, 338, 1227, 1374, 2617
BspANI	GGCC	3 cut(s)	251, 964, 1209
BspCNI	CTCAG	8 cut(s)	100, 366, 474, 1411, 1989, 2110, 2124, 2637
BspDI	ATCGAT	1 cut(s)	486
BspHI	TCATGA	3 cut(s)	625, 1492, 2347
BspLI	GGNNCC	2 cut(s)	1671, 2578
BspMAI	CTGCAG	1 cut(s)	2070
BspMI	ACCTGC	1 cut(s)	1085
BspT104I	TTCGAA	1 cut(s)	1627
BspTI	CTTAAG	1 cut(s)	1858
BspTNI	GGTCTC	1 cut(s)	1710
BsrDI	GCAATG	1 cut(s)	2688
BsrGI	TGTACA	2 cut(s)	793, 2601
BsrI	ACTGG	2 cut(s)	1328, 2145
BssECI	CCNNGG	3 cut(s)	1593, 1909, 2585
BssSI	CACGAG	1 cut(s)	2767
BssT1I	CCWWGG	2 cut(s)	1593, 2585
Bst2BI	CACGAG	1 cut(s)	2767
Bst4CI	ACNGT	8 cut(s)	999, 1091, 1117, 1618, 2049, 2255, 2326, 2677
Bst6I	CTCTTC	5 cut(s)	702, 738, 962, 1018, 2061
BstAFI	CTTAAG	1 cut(s)	1858
BstAUI	TGTACA	2 cut(s)	793, 2601
BstBAI	YACGTR	1 cut(s)	2746
BstBI	TTCGAA	1 cut(s)	1627
BstC8I	GCNNGC	6 cut(s)	99, 253, 644, 1122, 2383, 2705
BstDSI	CCRYGG	1 cut(s)	1593
BstEII	GGTNACC	1 cut(s)	1597
BstENI	CCTNNNNNAGG	1 cut(s)	256
BstF5I	GGATG	6 cut(s)	51, 588, 769, 1402, 1901, 2032
BstHHI	GCGC	1 cut(s)	2543
BstMAI	GTCTC	9 cut(s)	36, 546, 690, 1379, 1500, 1710, 2096, 2468, 2477
BstMCI	CGRYCG	1 cut(s)	490
BstMWI	GCNNNNNNNGC	1 cut(s)	2422
BstNSI	RCATGY	1 cut(s)	304
BstPI	GGTNACC	1 cut(s)	1597
BstSFI	CTRYAG	4 cut(s)	1608, 2066, 2325, 2478
BstV1I	GCAGC	8 cut(s)	190, 463, 850, 1236, 1412, 2172, 2211, 2412
BstV2I	GAAGAC	1 cut(s)	1636
BstX2I	RGATCY	3 cut(s)	711, 1726, 2341
BstXI	CCANNNNNNTGG	1 cut(s)	332
BstYI	RGATCY	3 cut(s)	711, 1726, 2341
Bsu15I	ATCGAT	1 cut(s)	486
Bsu36I	CCTNAGG	1 cut(s)	2132
BsuI	GTATCC	1 cut(s)	2139
BsuRI	GGCC	3 cut(s)	251, 964, 1209
BsuTUI	ATCGAT	1 cut(s)	486
BtgI	CCRYGG	1 cut(s)	1593
BtrI	CACGTC	1 cut(s)	1510
BtsCI	GGATG	6 cut(s)	51, 588, 769, 1402, 1901, 2032
BtsIMutI	CAGTG	4 cut(s)	1113, 1335, 1961, 2260
BveI	ACCTGC	1 cut(s)	1085
Cac8I	GCNNGC	6 cut(s)	99, 253, 644, 1122, 2383, 2705
CciI	TCATGA	3 cut(s)	625, 1492, 2347
CfoI	GCGC	1 cut(s)	2543
Cfr13I	GGNCC	3 cut(s)	1852, 2025, 2577
ClaI	ATCGAT	1 cut(s)	486
Csp6I	GTAC	9 cut(s)	420, 794, 1087, 1442, 1714, 2259, 2470, 2602, 2762
CspCI	CAANNNNNGTGG	2 cut(s)	1419, 1454
CviQI	GTAC	9 cut(s)	420, 794, 1087, 1442, 1714, 2259, 2470, 2602, 2762
DraI	TTTAAA	1 cut(s)	1944
Eam1104I	CTCTTC	5 cut(s)	702, 738, 962, 1018, 2061
EarI	CTCTTC	5 cut(s)	702, 738, 962, 1018, 2061
EciI	GGCGGA	1 cut(s)	353
Eco130I	CCWWGG	2 cut(s)	1593, 2585
Eco31I	GGTCTC	1 cut(s)	1710
Eco47I	GGWCC	3 cut(s)	1852, 2025, 2577
Eco57I	CTGAAG	3 cut(s)	444, 1067, 1332
Eco72I	CACGTG	1 cut(s)	2746
Eco81I	CCTNAGG	1 cut(s)	2132
Eco91I	GGTNACC	1 cut(s)	1597
EcoNI	CCTNNNNNAGG	1 cut(s)	256
EcoO65I	GGTNACC	1 cut(s)	1597
EcoT14I	CCWWGG	2 cut(s)	1593, 2585
ErhI	CCWWGG	2 cut(s)	1593, 2585
Esp3I	CGTCTC	2 cut(s)	690, 1500
FalI	AAGNNNNNCTT	2 cut(s)	81, 113
FaqI	GGGAC	4 cut(s)	279, 856, 863, 2590
FauNDI	CATATG	1 cut(s)	833
FblI	GTMKAC	1 cut(s)	2051
Fnu4HI	GCNGC	9 cut(s)	204, 452, 864, 1225, 1401, 2161, 2200, 2426, 2617
FokI	GGATG	6 cut(s)	38, 595, 776, 1409, 1888, 2019
Fsp4HI	GCNGC	9 cut(s)	204, 452, 864, 1225, 1401, 2161, 2200, 2426, 2617
FspBI	CTAG	5 cut(s)	2417, 2586, 2658, 2688, 2779
FspI	TGCGCA	1 cut(s)	2542
GlaI	GCGC	1 cut(s)	2542
GluI	GCNGC	9 cut(s)	204, 452, 864, 1225, 1401, 2161, 2200, 2426, 2617
GsaI	CCCAGC	1 cut(s)	41
GsuI	CTGGAG	2 cut(s)	1529, 2482
HaeIII	GGCC	3 cut(s)	251, 964, 1209
HapII	CCGG	1 cut(s)	961
HhaI	GCGC	1 cut(s)	2543
Hin6I	GCGC	1 cut(s)	2541
HinP1I	GCGC	1 cut(s)	2541
HindIII	AAGCTT	2 cut(s)	782, 1799
HinfI	GANTC	9 cut(s)	78, 348, 653, 1044, 1316, 1342, 1576, 1648, 1870
HpaII	CCGG	1 cut(s)	961
HphI	GGTGA	4 cut(s)	346, 779, 898, 1591
Hpy166II	GTNNAC	2 cut(s)	1855, 2052
Hpy8I	GTNNAC	2 cut(s)	1855, 2052
HpyCH4III	ACNGT	8 cut(s)	999, 1091, 1117, 1618, 2049, 2255, 2326, 2677
HpyCH4IV	ACGT	4 cut(s)	268, 699, 1509, 2745
HpyF10VI	GCNNNNNNNGC	1 cut(s)	2422
HpySE526I	ACGT	4 cut(s)	268, 699, 1509, 2745
HspAI	GCGC	1 cut(s)	2541
Lsp1109I	GCAGC	8 cut(s)	190, 463, 850, 1236, 1412, 2172, 2211, 2412
LweI	GCATC	6 cut(s)	130, 136, 1068, 1241, 1385, 1387
MaeI	CTAG	5 cut(s)	2417, 2586, 2658, 2688, 2779
MaeII	ACGT	4 cut(s)	268, 699, 1509, 2745
MaeIII	GTNAC	5 cut(s)	430, 1597, 2152, 2266, 2653
MfeI	CAATTG	1 cut(s)	1149
MflI	RGATCY	3 cut(s)	711, 1726, 2341
MhlI	GDGCHC	2 cut(s)	285, 1122
MlyI	GAGTC	5 cut(s)	87, 357, 1336, 1570, 1879
MmeI	TCCRAC	3 cut(s)	486, 2154, 2695
MroXI	GAANNNNTTC	4 cut(s)	128, 171, 472, 1668
MslI	CAYNNNNRTG	3 cut(s)	437, 1115, 1491
MspA1I	CMGCKG	1 cut(s)	1227
MspCI	CTTAAG	1 cut(s)	1858
MspI	CCGG	1 cut(s)	961
MunI	CAATTG	1 cut(s)	1149
Mva1269I	GAATGC	3 cut(s)	934, 1226, 2214
MwoI	GCNNNNNNNGC	1 cut(s)	2422
NcoI	CCATGG	1 cut(s)	1593
NdeI	CATATG	1 cut(s)	833
NlaIV	GGNNCC	2 cut(s)	1671, 2578
NmuCI	GTSAC	3 cut(s)	430, 1597, 2152
NsbI	TGCGCA	1 cut(s)	2542
NspI	RCATGY	1 cut(s)	304
NspV	TTCGAA	1 cut(s)	1627
OliI	CACNNNNGTG	1 cut(s)	437
PagI	TCATGA	3 cut(s)	625, 1492, 2347
PctI	GAATGC	3 cut(s)	934, 1226, 2214
PdmI	GAANNNNTTC	4 cut(s)	128, 171, 472, 1668
PfeI	GAWTC	4 cut(s)	653, 1044, 1316, 1648
PflMI	CCANNNNNTGG	1 cut(s)	2022
PkrI	GCNGC	9 cut(s)	205, 453, 865, 1226, 1402, 2162, 2201, 2427, 2618
Ple19I	CGATCG	1 cut(s)	490
PleI	GAGTC	5 cut(s)	86, 356, 1336, 1570, 1878
PmaCI	CACGTG	1 cut(s)	2746
PmlI	CACGTG	1 cut(s)	2746
PpsI	GAGTC	5 cut(s)	86, 356, 1336, 1570, 1878
Ppu21I	YACGTR	1 cut(s)	2746
PshBI	ATTAAT	1 cut(s)	119
PspCI	CACGTG	1 cut(s)	2746
PspEI	GGTNACC	1 cut(s)	1597
PspFI	CCCAGC	1 cut(s)	37
PspN4I	GGNNCC	2 cut(s)	1671, 2578
PspPI	GGNCC	3 cut(s)	1852, 2025, 2577
PstI	CTGCAG	1 cut(s)	2070
PsuI	RGATCY	3 cut(s)	711, 1726, 2341
PvuI	CGATCG	1 cut(s)	490
RsaI	GTAC	9 cut(s)	421, 795, 1088, 1443, 1715, 2260, 2471, 2603, 2763
RsaNI	GTAC	9 cut(s)	420, 794, 1087, 1442, 1714, 2259, 2470, 2602, 2762
RseI	CAYNNNNRTG	3 cut(s)	437, 1115, 1491
SatI	GCNGC	9 cut(s)	204, 452, 864, 1225, 1401, 2161, 2200, 2426, 2617
Sau96I	GGNCC	3 cut(s)	1852, 2025, 2577
ScaI	AGTACT	2 cut(s)	421, 1088
SchI	GAGTC	5 cut(s)	87, 357, 1336, 1570, 1879
SduI	GDGCHC	2 cut(s)	285, 1122
SfaNI	GCATC	6 cut(s)	130, 136, 1068, 1241, 1385, 1387
SfcI	CTRYAG	4 cut(s)	1608, 2066, 2325, 2478
SfuI	TTCGAA	1 cut(s)	1627
SinI	GGWCC	3 cut(s)	1852, 2025, 2577
SmiMI	CAYNNNNRTG	3 cut(s)	437, 1115, 1491
SmlI	CTYRAG	4 cut(s)	284, 1858, 2393, 2663
SmoI	CTYRAG	4 cut(s)	284, 1858, 2393, 2663
SsiI	CCGC	5 cut(s)	11, 338, 1227, 1374, 2617
SspI	AATATT	4 cut(s)	364, 900, 1017, 2612
SspMI	CTAG	5 cut(s)	2417, 2586, 2658, 2688, 2779
StyI	CCWWGG	2 cut(s)	1593, 2585
TaaI	ACNGT	8 cut(s)	999, 1091, 1117, 1618, 2049, 2255, 2326, 2677
TaiI	ACGT	4 cut(s)	271, 702, 1512, 2748
TaqI	TCGA	8 cut(s)	486, 1002, 1554, 1627, 1789, 2218, 2466, 2547
TaqII	GACCGA	1 cut(s)	1692
TatI	WGTACW	6 cut(s)	419, 793, 1086, 1713, 2601, 2761
TauI	GCSGC	1 cut(s)	2619
TfiI	GAWTC	4 cut(s)	653, 1044, 1316, 1648
TscAI	CASTG	4 cut(s)	1120, 1335, 1961, 2260
TseFI	GTSAC	3 cut(s)	430, 1597, 2152
TseI	GCWGC	8 cut(s)	203, 451, 863, 1224, 1400, 2160, 2199, 2425
Tsp45I	GTSAC	3 cut(s)	430, 1597, 2152
TspRI	CASTG	4 cut(s)	1120, 1335, 1961, 2260
Van91I	CCANNNNNTGG	1 cut(s)	2022
Vha464I	CTTAAG	1 cut(s)	1858
VpaK11BI	GGWCC	3 cut(s)	1852, 2025, 2577
VspI	ATTAAT	1 cut(s)	119
XagI	CCTNNNNNAGG	1 cut(s)	256
XapI	RAATTY	4 cut(s)	1036, 2181, 2236, 2308
XceI	RCATGY	1 cut(s)	304
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1977
XmaJI	CCTAGG	1 cut(s)	2585
XmiI	GTMKAC	1 cut(s)	2051
XmnI	GAANNNNTTC	4 cut(s)	128, 171, 472, 1668
XspI	CTAG	5 cut(s)	2417, 2586, 2658, 2688, 2779
ZrmI	AGTACT	2 cut(s)	421, 1088

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.