FvH4_7g08100

disease resistance

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
Physical Location & Seq
Reverse (-)
8042725 .. 8046187
3463 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g08100.t1

Sequence Viewer

Length: 2883 bp
ATGGCTGAGGCTGTCGTATCAATGGTGTTGGAATCACTCGCCCTTTTGTCTACGGAATTGACTCTCTCGAGTGGAAGGGCTAGACTCACGGATCAGATTCTGGATGCACAAGGACAGCTAATAATGATACGTAGTTTACTCGAAGATGCAGATGCAAGACAAAGCCACGTTGACGAAGTCAGCGACTGGGTTGCAACAATTAGAGACGCTGTTTGTGATTTGGAGGATATCATCGAATCTTATGTCTTGAAAGAGGCTTCCCGGAGGAACGGAAGTTGGATGCAGATTATTGCCAGAGGGTTTGCTTGCGTCGGTGTCGTTGATATTGGTAAGACTGGGTTGAAAATTAGAAGAATTAGGGCCCAACTATCTGATTTGATCGATAGTTTTATAAATTATGGCATAGTTAGTCGGATGCGGCCGGATAATGAATCTGCCACTTCTGTACGAAACAATCTGATGTCGAGACGAACCTATTCTCATGCTATCGAGCGATTTGTTGTTGGTTTAGAAGAAGACGTTGGCAGTTTGGTTAGGCATTTGGTTGGAGGAGAAAACAGCCCTAGTGTGGTGTCTGTTTGGGGCATGGCCGGTGTTGGGAAGACCACAGTTGCACAACAAGTCTACCATCATACCAAGATTAGATATCATTTTGACTGCATGGCTTGGGTGTGTTTGTCTCAAGAATTTCAATCAAGAGATGTTCTCCAAGAAATCTTGACTAAACTTATTAGTGCTACCGATGAGCAAAGAAGAGAGTTTGCAGAGATGAATGCTTCAGAAATAGCCGAGCTGCTGTATAATACACAACAAAGAAACAAGTGTTTTGTAGTGCTTGATGACATTTGGACCCGTGATGCATGGGATTCTTTGAAACTTGCGTTTCCCGGTGAGGGAACAAAGAGCAAAATATTGCTCACTACTCGTAGTGAAGAAGTAGCTTTACATGCTGCAGGCGGAGAAGGAGGTTTTCTCTATAAAGCTCGGCCTCTAATGGAACAGGAAAGCTGGATACTGTTTAAGCAGACAGCATTTCCTGAACCGGTTGCTCACACAGAATCTATTCGACAAAAGGAGGTATTAGGAATGAAAATGGTTGAAAGGTGTGGAGGATTGCCATTAGCTGTCATTGTGCTCGCAGGACTTCTAGCTAGGAAGAACACAGTTGAAGAATGGTTAACTGTGAGTGAGGATGTTGAGGCATACTTAAGGGGAGGCAAATATGAAGGCAAATATGAAGGTACATCATGGGTGTTGAAAATGAGTTACGATAACTTGCCAGAACATTTACAAATATGCTTTCAATATTTAGGCAATTTTCCCGAGGATTATGAGATACCAGTGAAAACATTGACCCGATTATGGATTGCAGAAGGTCTCATAGCTCCAATATCTTCGGAATCAGCAGAGAATATAGAAGATGCATCATATGGTTACTTGAATGAGTTGGTCGAAAGGTGCATGGTTCAAGTTGTAAAACATAGTTTAACTGGAAATATCAAAACCATTCGTCTCCATGATGTTATGCTAGAATTGTGCCGTAAAATGGCAGAACGTGAGAACTTTCTTTATGTGGTCAATTCTTCTGAAGCCACACAGACCCAGCTGGCAGCATCATGCAACAAAGTTCCAAGACTTGCGGTCTATTTATTTAGTATACTTGAGAACCTTCTGCATGCTGTCAATTCTTCTGAAGCCACAGAGACCCAGGCATCAATCAAAAAAGTTAGAAGACTTGCGGTCCATTTAGACGGAATTGGTCATGAGTTAGCTCCGCCATGTGATAAAAGACATGCCTCCCTCAGGTCTCTATTATTCTTTGTTGGAGGACACTATTATTCAGACATACATAGAAAGTTACTGAGGTCACTTTGCAGAGATTTCAAATTTCTTAAAGTTTTAAAATTTGAAGATATGAAGGCAGAACCAGAGGTAGAATTGCCGAGCGATATCGGGAATTTAGTCCACTTGAGGTTCTTAAGTCTGAAGAACAGTGAAATAAAACGGTTACCATCATCTGTGGCTAATTTGGTATGTTTGCAGACACTAGATTTACGTTCTGTGGAATGGGTTAGTGTTAAAATTCCAAATGTATTTTGGAAGATGGCGAAGTTGAGACATTTATATTTACCCTTGAATCACAGAGTAACTGAGAAGCTGTCATTGGCCACGCTTCACAATTTGCAGACATTAGCCAACATTTCAAGTCAAGATTGTGATTTGAAGGATCTTATTGAGCTAACTGATCTAAGAAAATTAGTCCTGGATGCACGGGAACCAACCGAGTTCAAAACTCTGGAGGAAATCATGATATCTAGCAGCATCACATTTGACCATCTTCAGTCTCTATCTTTGGTGACAGGCAACGGCAATGGGGATATACCAACACTTATAGTATTGAGCTGTCCTCATCTTTTGAAGCTGCAATTGTATGGAAGAATCAAAGGGTTCCCAGACGACGATCATTTCTCAAACCTCATCAAGGTAACCTTGGAGGAAACTAATCTACAGGCCTGCCATATAAAAAGGCTAGAGAAGCTAACCAAGTTAAAAGTGCTTTTCCTTAGAATGGGTGCTTTGAAGTCAGAAACTATGGTTTTCTCCAAGGAAGGCTTTCCTCAACTCGAGTTTCTTTCCCTGCTTGGCTTATGTGAACTAAAGGAGTGGACAGTGGAGGAAGGAGCCATGCCAAGACTCTACAGTTTGCACATCGGATATTGCTGGAGGTTGAGGGCAGTTCCAGATGGACTTCAACATATTCTTACCCTCAAGGAGTTAACCATCAAACGGATGTATCATGAATTTTGTAAAAGACTTGAAAAAGGAGGAGCAGATTTCGACAAATTCAGACATGCATCGGTTACAATAACAAACAAGAGATGA

Protein Analysis

961

Amino Acids

108.86

Weight (kDa)

6.45

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 5 - 90 4.8e-12 Rx N-terminal domain
NB-ARC PF00931 171 - 348 7.6e-40 NB-ARC domain
WHD_DRP PF23559 440 - 512 1.5e-16 Disease resistance protein Winged helix domain
LRR_14 PF23598 625 - 932 4.4e-38 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 392
AccI GTMKAC 3 cut(s) 50, 624, 1657
AciI CCGC 5 cut(s) 418, 957, 1640, 1739, 1775
AclWI GGATC 2 cut(s) 99, 2235
AcoI YGGCCR 3 cut(s) 419, 588, 2166
AcsI RAATTY 7 cut(s) 686, 1886, 1904, 1957, 2082, 2801, 2843
AcuI CTGAAG 5 cut(s) 762, 1608, 1713, 2006, 2324
AfaI GTAC 2 cut(s) 447, 1243
AfiI CCNNNNNNNGG 9 cut(s) 568, 597, 893, 1362, 1546, 1803, 2482, 2569, 2787
AflII CTTAAG 2 cut(s) 1207, 1978
AgeI ACCGGT 1 cut(s) 1042
AhdI GACNNNNNGTC 2 cut(s) 1640, 1739
AjnI CCWGG 2 cut(s) 1707, 2262
AjuI GAANNNNNNNTTGG 4 cut(s) 504, 536, 2147, 2179
Alw21I GWGCWC 1 cut(s) 1137
Alw26I GTCTC 9 cut(s) 198, 460, 684, 1382, 1517, 1697, 1812, 2110, 2349
AlwI GGATC 2 cut(s) 99, 2235
AlwNI CAGNNNCTG 2 cut(s) 100, 186
Ama87I CYCGRG 3 cut(s) 67, 1322, 2624
AoxI GGCC 6 cut(s) 360, 419, 588, 986, 2166, 2511
ApaI GGGCCC 1 cut(s) 364
ApeKI GCWGC 5 cut(s) 793, 950, 1610, 2319, 2422
ApoI RAATTY 7 cut(s) 686, 1886, 1904, 1957, 2082, 2801, 2843
ArsI GACNNNNNNTTYG 2 cut(s) 228, 260
AsiGI ACCGGT 1 cut(s) 1042
Asp700I GAANNNNTTC 3 cut(s) 475, 1062, 2613
AspS9I GGNCC 4 cut(s) 360, 361, 849, 1741
AsuC2I CCSGG 2 cut(s) 262, 888
AsuHPI GGTGA 2 cut(s) 902, 2368
AvaI CYCGRG 3 cut(s) 67, 1322, 2624
AvaII GGWCC 2 cut(s) 849, 1741
AxyI CCTNAGG 1 cut(s) 1802
BaeGI GKGCMC 1 cut(s) 364
BaeI ACNNNNGTAYC 2 cut(s) 2777, 2810
BalI TGGCCA 1 cut(s) 2168
BanII GRGCYC 1 cut(s) 364
BarI GAAGNNNNNNTAC 2 cut(s) 927, 959
BbsI GAAGAC 3 cut(s) 522, 608, 1738
Bbv12I GWGCWC 1 cut(s) 1137
BbvCI CCTCAGC 1 cut(s) 6
BbvI GCAGC 5 cut(s) 780, 937, 1622, 2331, 2409
BccI CCATC 6 cut(s) 636, 2020, 2098, 2343, 2738, 2789
BceAI ACGGC 2 cut(s) 1524, 2383
BcgI CGANNNNNNTGC 2 cut(s) 173, 207
BciT130I CCWGG 2 cut(s) 1709, 2264
BciVI GTATCC 1 cut(s) 1005
BcnI CCSGG 2 cut(s) 262, 888
BcoDI GTCTC 9 cut(s) 198, 460, 684, 1382, 1517, 1697, 1812, 2110, 2349
BfaI CTAG 8 cut(s) 81, 564, 1148, 1152, 1529, 2048, 2316, 2531
BfmI CTRYAG 3 cut(s) 951, 2507, 2698
BfrI CTTAAG 2 cut(s) 1207, 1978
BfuI GTATCC 1 cut(s) 1005
BisI GCNGC 6 cut(s) 419, 794, 951, 1611, 2320, 2423
BlsI GCNGC 6 cut(s) 420, 795, 952, 1612, 2321, 2424
Bme1390I CCNGG 4 cut(s) 262, 888, 1709, 2264
Bme18I GGWCC 2 cut(s) 849, 1741
BmeRI GACNNNNNGTC 2 cut(s) 1640, 1739
BmeT110I CYCGRG 3 cut(s) 67, 1322, 2624
BmgT120I GGNCC 4 cut(s) 360, 361, 849, 1741
BmiI GGNNCC 5 cut(s) 362, 851, 2277, 2450, 2683
BmrFI CCNGG 4 cut(s) 262, 888, 1709, 2264
BmrI ACTGGG 2 cut(s) 196, 345
BmuI ACTGGG 2 cut(s) 196, 345
BpiI GAAGAC 3 cut(s) 522, 608, 1738
BplI GAGNNNNNCTC 6 cut(s) 690, 722, 957, 989, 2392, 2424
BpmI CTGGAG 2 cut(s) 2318, 2743
Bpu10I CCTNAGC 1 cut(s) 6
BpuEI CTTGAG 4 cut(s) 666, 1682, 1990, 2753
BpuMI CCSGG 2 cut(s) 262, 888
Bsa29I ATCGAT 1 cut(s) 381
BsaAI YACGTR 1 cut(s) 131
BsaI GGTCTC 3 cut(s) 1382, 1697, 1812
BsaJI CCNNGG 4 cut(s) 1323, 1707, 2490, 2604
BsaWI WCCGGW 1 cut(s) 1042
Bsc4I CCNNNNNNNGG 9 cut(s) 568, 597, 893, 1362, 1546, 1803, 2482, 2569, 2787
Bse118I RCCGGY 2 cut(s) 590, 1042
Bse1I ACTGG 4 cut(s) 191, 340, 1340, 1495
Bse21I CCTNAGG 1 cut(s) 1802
Bse3DI GCAATG 1 cut(s) 2377
BseBI CCWGG 2 cut(s) 1709, 2264
BseCI ATCGAT 1 cut(s) 381
BseDI CCNNGG 4 cut(s) 1323, 1707, 2490, 2604
BseGI GGATG 6 cut(s) 109, 285, 420, 1198, 2272, 2796
BseLI CCNNNNNNNGG 9 cut(s) 568, 597, 893, 1362, 1546, 1803, 2482, 2569, 2787
BseMI GCAATG 1 cut(s) 2377
BseMII CTCAG 3 cut(s) 1816, 1853, 2142
BseNI ACTGG 4 cut(s) 191, 340, 1340, 1495
BseRI GAGGAG 2 cut(s) 564, 2841
BseSI GKGCMC 1 cut(s) 364
BseX3I CGGCCG 1 cut(s) 419
BseXI GCAGC 5 cut(s) 780, 937, 1622, 2331, 2409
BseYI CCCAGC 1 cut(s) 1602
Bsh1285I CGRYCG 1 cut(s) 422
BshFI GGCC 6 cut(s) 362, 421, 590, 988, 2168, 2513
BshTI ACCGGT 1 cut(s) 1042
BshVI ATCGAT 1 cut(s) 381
BsiEI CGRYCG 1 cut(s) 422
BsiHKAI GWGCWC 1 cut(s) 1137
BsiHKCI CYCGRG 3 cut(s) 67, 1322, 2624
BsiSI CCGG 5 cut(s) 262, 422, 591, 888, 1043
BslI CCNNNNNNNGG 9 cut(s) 568, 597, 893, 1362, 1546, 1803, 2482, 2569, 2787
BsmAI GTCTC 9 cut(s) 198, 460, 684, 1382, 1517, 1697, 1812, 2110, 2349
BsmBI CGTCTC 3 cut(s) 198, 460, 1517
BsmI GAATGC 1 cut(s) 778
BsnI GGCC 6 cut(s) 362, 421, 590, 988, 2168, 2513
Bso31I GGTCTC 3 cut(s) 1382, 1697, 1812
BsoBI CYCGRG 3 cut(s) 67, 1322, 2624
Bsp120I GGGCCC 1 cut(s) 360
Bsp1286I GDGCHC 2 cut(s) 364, 1137
Bsp143I GATC 5 cut(s) 91, 378, 2227, 2245, 2461
BspACI CCGC 5 cut(s) 418, 957, 1640, 1739, 1775
BspANI GGCC 6 cut(s) 362, 421, 590, 988, 2168, 2513
BspCNI CTCAG 3 cut(s) 1815, 1854, 2143
BspDI ATCGAT 1 cut(s) 381
BspHI TCATGA 3 cut(s) 1762, 2307, 2797
BspLI GGNNCC 5 cut(s) 362, 851, 2277, 2450, 2683
BspMAI CTGCAG 1 cut(s) 955
BspPI GGATC 2 cut(s) 99, 2235
BspTI CTTAAG 2 cut(s) 1207, 1978
BspTNI GGTCTC 3 cut(s) 1382, 1697, 1812
BsrDI GCAATG 1 cut(s) 2377
BsrFI RCCGGY 2 cut(s) 590, 1042
BsrI ACTGG 4 cut(s) 191, 340, 1340, 1495
BssAI RCCGGY 2 cut(s) 590, 1042
BssECI CCNNGG 4 cut(s) 1323, 1707, 2490, 2604
BssMI GATC 5 cut(s) 91, 378, 2227, 2245, 2461
BssNAI GTATAC 1 cut(s) 1658
BssT1I CCWWGG 2 cut(s) 2490, 2604
Bst1107I GTATAC 1 cut(s) 1658
Bst2UI CCWGG 2 cut(s) 1709, 2264
Bst4CI ACNGT 8 cut(s) 610, 1017, 1165, 1183, 1994, 2007, 2671, 2702
Bst6I CTCTTC 1 cut(s) 748
BstAFI CTTAAG 2 cut(s) 1207, 1978
BstBAI YACGTR 1 cut(s) 131
BstC8I GCNNGC 6 cut(s) 307, 955, 1137, 1608, 1677, 2515
BstDEI CTNAG 6 cut(s) 6, 1802, 1862, 2151, 2249, 2564
BstEII GGTNACC 2 cut(s) 2007, 2485
BstENI CCTNNNNNAGG 2 cut(s) 1801, 2480
BstF5I GGATG 6 cut(s) 109, 285, 420, 1198, 2272, 2796
BstKTI GATC 5 cut(s) 94, 381, 2230, 2248, 2464
BstMAI GTCTC 9 cut(s) 198, 460, 684, 1382, 1517, 1697, 1812, 2110, 2349
BstMBI GATC 5 cut(s) 91, 378, 2227, 2245, 2461
BstMCI CGRYCG 1 cut(s) 422
BstMWI GCNNNNNNNGC 2 cut(s) 947, 2536
BstNI CCWGG 2 cut(s) 1709, 2264
BstNSI RCATGY 4 cut(s) 950, 1679, 1796, 2855
BstPI GGTNACC 2 cut(s) 2007, 2485
BstSCI CCNGG 4 cut(s) 260, 886, 1707, 2262
BstSFI CTRYAG 3 cut(s) 951, 2507, 2698
BstSLI GKGCMC 1 cut(s) 364
BstSNI TACGTA 1 cut(s) 131
BstV1I GCAGC 5 cut(s) 780, 937, 1622, 2331, 2409
BstV2I GAAGAC 3 cut(s) 522, 608, 1738
BstX2I RGATCY 1 cut(s) 2227
BstYI RGATCY 1 cut(s) 2227
BstZ17I GTATAC 1 cut(s) 1658
BstZI CGGCCG 1 cut(s) 419
Bsu15I ATCGAT 1 cut(s) 381
Bsu36I CCTNAGG 1 cut(s) 1802
BsuI GTATCC 1 cut(s) 1005
BsuRI GGCC 6 cut(s) 362, 421, 590, 988, 2168, 2513
BsuTUI ATCGAT 1 cut(s) 381
BtsCI GGATG 6 cut(s) 109, 285, 420, 1198, 2272, 2796
BtsIMutI CAGTG 3 cut(s) 1347, 1999, 2676
Cac8I GCNNGC 6 cut(s) 307, 955, 1137, 1608, 1677, 2515
CaiI CAGNNNCTG 2 cut(s) 100, 186
CciI TCATGA 3 cut(s) 1762, 2307, 2797
Cfr10I RCCGGY 2 cut(s) 590, 1042
Cfr13I GGNCC 4 cut(s) 360, 361, 849, 1741
ClaI ATCGAT 1 cut(s) 381
CseI GACGC 2 cut(s) 215, 298
Csp6I GTAC 2 cut(s) 446, 1242
CspAI ACCGGT 1 cut(s) 1042
CviQI GTAC 2 cut(s) 446, 1242
DdeI CTNAG 6 cut(s) 6, 1802, 1862, 2151, 2249, 2564
DpnI GATC 5 cut(s) 93, 380, 2229, 2247, 2463
DpnII GATC 5 cut(s) 91, 378, 2227, 2245, 2461
DraI TTTAAA 1 cut(s) 1902
DriI GACNNNNNGTC 2 cut(s) 1640, 1739
EaeI YGGCCR 3 cut(s) 419, 588, 2166
EagI CGGCCG 1 cut(s) 419
Eam1104I CTCTTC 1 cut(s) 748
Eam1105I GACNNNNNGTC 2 cut(s) 1640, 1739
EarI CTCTTC 1 cut(s) 748
EciI GGCGGA 2 cut(s) 972, 1764
EclXI CGGCCG 1 cut(s) 419
Eco105I TACGTA 1 cut(s) 131
Eco130I CCWWGG 2 cut(s) 2490, 2604
Eco147I AGGCCT 1 cut(s) 2513
Eco24I GRGCYC 1 cut(s) 364
Eco31I GGTCTC 3 cut(s) 1382, 1697, 1812
Eco32I GATATC 4 cut(s) 229, 647, 1951, 2313
Eco47I GGWCC 2 cut(s) 849, 1741
Eco52I CGGCCG 1 cut(s) 419
Eco57I CTGAAG 5 cut(s) 762, 1608, 1713, 2006, 2324
Eco81I CCTNAGG 1 cut(s) 1802
Eco88I CYCGRG 3 cut(s) 67, 1322, 2624
Eco91I GGTNACC 2 cut(s) 2007, 2485
EcoNI CCTNNNNNAGG 2 cut(s) 1801, 2480
EcoO109I RGGNCCY 1 cut(s) 360
EcoO65I GGTNACC 2 cut(s) 2007, 2485
EcoRII CCWGG 2 cut(s) 1707, 2262
EcoRV GATATC 4 cut(s) 229, 647, 1951, 2313
EcoT14I CCWWGG 2 cut(s) 2490, 2604
EcoT22I ATGCAT 3 cut(s) 862, 1426, 2857
EcoT38I GRGCYC 1 cut(s) 364
ErhI CCWWGG 2 cut(s) 2490, 2604
Esp3I CGTCTC 3 cut(s) 198, 460, 1517
FalI AAGNNNNNCTT 4 cut(s) 2474, 2506, 2597, 2629
FauNDI CATATG 1 cut(s) 1429
FblI GTMKAC 3 cut(s) 50, 624, 1657
Fnu4HI GCNGC 6 cut(s) 419, 794, 951, 1611, 2320, 2423
FokI GGATG 6 cut(s) 116, 292, 427, 1205, 2279, 2803
FriOI GRGCYC 1 cut(s) 364
Fsp4HI GCNGC 6 cut(s) 419, 794, 951, 1611, 2320, 2423
FspBI CTAG 8 cut(s) 81, 564, 1148, 1152, 1529, 2048, 2316, 2531
GluI GCNGC 6 cut(s) 419, 794, 951, 1611, 2320, 2423
GsaI CCCAGC 1 cut(s) 1606
GsuI CTGGAG 2 cut(s) 2318, 2743
HaeIII GGCC 6 cut(s) 362, 421, 590, 988, 2168, 2513
HapII CCGG 5 cut(s) 262, 422, 591, 888, 1043
HgaI GACGC 2 cut(s) 215, 298
HincII GTYRAC 3 cut(s) 172, 1179, 2778
HindII GTYRAC 3 cut(s) 172, 1179, 2778
HpaI GTTAAC 2 cut(s) 1179, 2778
HpaII CCGG 5 cut(s) 262, 422, 591, 888, 1043
HphI GGTGA 2 cut(s) 902, 2368
Hpy99I CGWCG 2 cut(s) 314, 2462
HpyCH4III ACNGT 8 cut(s) 610, 1017, 1165, 1183, 1994, 2007, 2671, 2702
HpyCH4IV ACGT 5 cut(s) 130, 168, 519, 1555, 2056
HpyF10VI GCNNNNNNNGC 2 cut(s) 947, 2536
HpyF3I CTNAG 6 cut(s) 6, 1802, 1862, 2151, 2249, 2564
HpySE526I ACGT 5 cut(s) 130, 168, 519, 1555, 2056
KspAI GTTAAC 2 cut(s) 1179, 2778
Kzo9I GATC 5 cut(s) 91, 378, 2227, 2245, 2461
LmnI GCTCC 4 cut(s) 1390, 1777, 2681, 2828
Lsp1109I GCAGC 5 cut(s) 780, 937, 1622, 2331, 2409
MaeI CTAG 8 cut(s) 81, 564, 1148, 1152, 1529, 2048, 2316, 2531
MaeII ACGT 5 cut(s) 130, 168, 519, 1555, 2056
MaeIII GTNAC 9 cut(s) 1265, 1433, 1857, 1866, 2007, 2146, 2356, 2485, 2860
MalI GATC 5 cut(s) 93, 380, 2229, 2247, 2463
MboI GATC 5 cut(s) 91, 378, 2227, 2245, 2461
MfeI CAATTG 1 cut(s) 2426
MflI RGATCY 1 cut(s) 2227
MhlI GDGCHC 2 cut(s) 364, 1137
MlsI TGGCCA 1 cut(s) 2168
MluNI TGGCCA 1 cut(s) 2168
MlyI GAGTC 3 cut(s) 55, 78, 2688
MmeI TCCRAC 5 cut(s) 9, 257, 392, 526, 1804
Mox20I TGGCCA 1 cut(s) 2168
Mph1103I ATGCAT 3 cut(s) 862, 1426, 2857
MroXI GAANNNNTTC 3 cut(s) 475, 1062, 2613
MscI TGGCCA 1 cut(s) 2168
Msp20I TGGCCA 1 cut(s) 2168
MspA1I CMGCKG 1 cut(s) 1606
MspCI CTTAAG 2 cut(s) 1207, 1978
MspI CCGG 5 cut(s) 262, 422, 591, 888, 1043
MspR9I CCNGG 4 cut(s) 262, 888, 1709, 2264
MunI CAATTG 1 cut(s) 2426
Mva1269I GAATGC 1 cut(s) 778
MvaI CCWGG 2 cut(s) 1709, 2264
MwoI GCNNNNNNNGC 2 cut(s) 947, 2536
NciI CCSGG 2 cut(s) 262, 888
NdeI CATATG 1 cut(s) 1429
NdeII GATC 5 cut(s) 91, 378, 2227, 2245, 2461
NlaIV GGNNCC 5 cut(s) 362, 851, 2277, 2450, 2683
NmeAIII GCCGAG 3 cut(s) 814, 964, 1968
NmuCI GTSAC 2 cut(s) 1866, 2356
NsiI ATGCAT 3 cut(s) 862, 1426, 2857
NspI RCATGY 4 cut(s) 950, 1679, 1796, 2855
PaeI GCATGC 1 cut(s) 1679
PaeR7I CTCGAG 2 cut(s) 67, 2624
PagI TCATGA 3 cut(s) 1762, 2307, 2797
PceI AGGCCT 1 cut(s) 2513
PcsI WCGNNNNNNNCGW 1 cut(s) 180
PctI GAATGC 1 cut(s) 778
PdmI GAANNNNTTC 3 cut(s) 475, 1062, 2613
PfeI GAWTC 9 cut(s) 32, 97, 236, 431, 866, 1058, 1400, 2137, 2439
PflFI GACNNNGTC 1 cut(s) 176
PfoI TCCNGGA 2 cut(s) 260, 2262
PinAI ACCGGT 1 cut(s) 1042
PkrI GCNGC 6 cut(s) 420, 795, 952, 1612, 2321, 2424
PleI GAGTC 3 cut(s) 55, 78, 2688
PpsI GAGTC 3 cut(s) 55, 78, 2688
Ppu21I YACGTR 1 cut(s) 131
PsiI TTATAA 1 cut(s) 392
Psp6I CCWGG 2 cut(s) 1707, 2262
PspEI GGTNACC 2 cut(s) 2007, 2485
PspFI CCCAGC 1 cut(s) 1602
PspGI CCWGG 2 cut(s) 1707, 2262
PspN4I GGNNCC 5 cut(s) 362, 851, 2277, 2450, 2683
PspOMI GGGCCC 1 cut(s) 360
PspPI GGNCC 4 cut(s) 360, 361, 849, 1741
PspXI VCTCGAGB 1 cut(s) 2624
PstI CTGCAG 1 cut(s) 955
PstNI CAGNNNCTG 2 cut(s) 100, 186
PsuI RGATCY 1 cut(s) 2227
PsyI GACNNNGTC 1 cut(s) 176
PvuII CAGCTG 1 cut(s) 1606
RsaI GTAC 2 cut(s) 447, 1243
RsaNI GTAC 2 cut(s) 446, 1242
SatI GCNGC 6 cut(s) 419, 794, 951, 1611, 2320, 2423
Sau3AI GATC 5 cut(s) 91, 378, 2227, 2245, 2461
Sau96I GGNCC 4 cut(s) 360, 361, 849, 1741
SchI GAGTC 3 cut(s) 55, 78, 2688
ScrFI CCNGG 4 cut(s) 262, 888, 1709, 2264
SduI GDGCHC 2 cut(s) 364, 1137
SfcI CTRYAG 3 cut(s) 951, 2507, 2698
Sfr274I CTCGAG 2 cut(s) 67, 2624
SinI GGWCC 2 cut(s) 849, 1741
SlaI CTCGAG 2 cut(s) 67, 2624
SmlI CTYRAG 8 cut(s) 67, 681, 1207, 1661, 1969, 1978, 2624, 2768
SmoI CTYRAG 8 cut(s) 67, 681, 1207, 1661, 1969, 1978, 2624, 2768
SnaBI TACGTA 1 cut(s) 131
SphI GCATGC 1 cut(s) 1679
SseBI AGGCCT 1 cut(s) 2513
SsiI CCGC 5 cut(s) 418, 957, 1640, 1739, 1775
SspI AATATT 2 cut(s) 912, 1307
SspMI CTAG 8 cut(s) 81, 564, 1148, 1152, 1529, 2048, 2316, 2531
StuI AGGCCT 1 cut(s) 2513
StyD4I CCNGG 4 cut(s) 260, 886, 1707, 2262
StyI CCWWGG 2 cut(s) 2490, 2604
TaaI ACNGT 8 cut(s) 610, 1017, 1165, 1183, 1994, 2007, 2671, 2702
TaiI ACGT 5 cut(s) 133, 171, 522, 1558, 2059
TauI GCSGC 1 cut(s) 421
TfiI GAWTC 9 cut(s) 32, 97, 236, 431, 866, 1058, 1400, 2137, 2439
TscAI CASTG 3 cut(s) 1347, 1999, 2676
TseFI GTSAC 2 cut(s) 1866, 2356
TseI GCWGC 5 cut(s) 793, 950, 1610, 2319, 2422
Tsp45I GTSAC 2 cut(s) 1866, 2356
TspDTI ATGAA 7 cut(s) 444, 785, 1103, 1239, 1251, 1931, 2814
TspGWI ACGGA 5 cut(s) 68, 104, 285, 1767, 2803
TspRI CASTG 3 cut(s) 1347, 1999, 2676
Tth111I GACNNNGTC 1 cut(s) 176
Vha464I CTTAAG 2 cut(s) 1207, 1978
VpaK11BI GGWCC 2 cut(s) 849, 1741
XagI CCTNNNNNAGG 2 cut(s) 1801, 2480
XapI RAATTY 7 cut(s) 686, 1886, 1904, 1957, 2082, 2801, 2843
XceI RCATGY 4 cut(s) 950, 1679, 1796, 2855
XcmI CCANNNNNNNNNTGG 1 cut(s) 2094
XhoI CTCGAG 2 cut(s) 67, 2624
XmiI GTMKAC 3 cut(s) 50, 624, 1657
XmnI GAANNNNTTC 3 cut(s) 475, 1062, 2613
XspI CTAG 8 cut(s) 81, 564, 1148, 1152, 1529, 2048, 2316, 2531
Zsp2I ATGCAT 3 cut(s) 862, 1426, 2857
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.