Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

37892299 .. 37894615

Gene Structure 2317 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ57189

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1788 bp

ATGGCTGACGCTGTTGTTTCAGTTGTGGCCGAAGGGATCAAGCTGCTCGGAGACTACATCCTACAGCAAGCAAAATCCTCGAGTGGAGTCAGCTACCAAGTTAGGCTTGCACAAGTCGAGCTACACTTGATGCGTGGCTTCCTGAAAGATGCAGATTCAAGAACTGGAGAAGATGAAGTTGTGCGCATTTGGGTAGAACTCATTAGAGATGCTGCTTATGATTTGGAAGATGTCATAGAATCTTTCGCCTTAAAATTGGCTTACAGGAGGAGAGGAGGTACTGTGAAGATTGTTCTTAAAAGGTTTGCCTGCATTTTCAGTGAAAGAGTTGATCTTCACAAGATTGGGTCGGAAATTGAGGAAATTATGACCGAACTTTCTCATTTGAGGTCGAGTTTGCAAAGTTATAACATAAGACAAGTAAGTGGGGGTGAAAGTGTGGCTTCTGTTTTTAAGAGGCAACGAGATAGGAGGCTAACTTATGCTCATGAAGTTGAAAGTTATATTGTTGGGTTGGAGGAAAACACGAAAAGACTGGTGAAAGAGTTGTTAAGAGACGGAAAGTGTCACCGTGTTGTTTCTATTTGGGGGATGGGCGGCTCTGGAAAATCCACTCTTGCAAAACAGGTTTTTCTTCAAAATGAAGTTGAGCGCCATTTTGATTGTTTTGCTTGGGTCTGCATATCTCAACAATGGGAAGGAAAGGATGTATTGGAAGAGATTTTAATTAAACTCACTTCCCCGGCAACAGAGGAAAGGAAAAAAATTTCCAAAATGAAAAAGGATGAAATAGCAGGGGAGGTCTGTAGTATCCAAAGACAAAAGAGATGTCTCGTGGTCCTTGATGACATATGGACTCAAGAGGCTTGGAATTCGATAAAGCCTGGATTCCCAATCACTCAGGAAACAGAAAGCCGGATATTACTCACTTCTCGGAAGAAAGAAGTCGCCTTGCTTGCATCCAGAAATGGCTATCTCCACCAGCCTCAGCCTCTAGATGCCATGCAAAGCTGGGAACTGTTTGAAAAGATAGCCATCTGTGGAAGCGACAAAACAGACTTGCCAATTTATGAAAAGAAGAAAAAATTAGGAGAGAAGATGCTTATACATTGTTCAGGTCTACCATTAGCCATCAGTGTGCTCGCTGGTCTTCTTAGTAGACGAGAGACGGTTGATGAGTGGAACAAAGTACTTGAAAATGTTGTTGTATACATAATGAGAGGCACAAATGTCCTTGAAAGAGAAAAGACGAGTCAGGAGTGTGGAGTTTCAGGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTAAAACTCTGCTTTCTGTATTTAGCCCAATATCCTGAGGATCATGAGATACAGGTAACAAGATTGACTCAATTATGGATTGCAGAAGGGTTTATACCTTCAACATCAGAAATACATGGTTCGGTGGAAATAATGGAAGATGTATCATATGGTTGCCTAACTGAACTGGTGCAAAGATCTATGGTTCAAGTTGGAAAATATGGTTTTAGTGGGAAGGTGAAAAGTTGCCGTCTCCATGATCTGATGCGGGACTTGTGCTTGCAAAAGGCAAAAGAGGAGAACTTTCTTGCTATTGTTAACTTTTCTGTGGGTCCGGTATCTTATGCAACGCTGATTGGTAAGGTTCGAAGACTTGCCCTCTATTTGGACGAAAATAAATATGAGTTCAGTAGTGAGAATGGAAGAGATGGCCGCATTAGGTCTCTATTATACTTTGCCCCACAAAAGAGTTCTACCAAAAGTGGAACAAAAGAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

595

Amino Acids

67.54

Weight (kDa)

7.52

Isoelectric Point (pI)

46.13

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rx_N	PF18052	13 - 90	4.4e-17	Rx N-terminal domain
NB-ARC	PF00931	173 - 346	1.1e-39	NB-ARC domain
WHD_DRP	PF23559	448 - 523	6.9e-19	Disease resistance protein Winged helix domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	408
Acc16I	TGCGCA	1 cut(s)	185
AccI	GTMKAC	3 cut(s)	1120, 1159, 1209
AciI	CCGC	3 cut(s)	597, 1558, 1723
AclWI	GGATC	2 cut(s)	44, 1359
AcoI	YGGCCR	2 cut(s)	27, 1720
AcsI	RAATTY	2 cut(s)	765, 871
AfaI	GTAC	2 cut(s)	280, 1191
AfiI	CCNNNNNNNGG	1 cut(s)	1675
AgsI	TTSAA	8 cut(s)	159, 497, 638, 1025, 1196, 1238, 1413, 1499
AjnI	CCWGG	1 cut(s)	883
AluBI	AGCT	4 cut(s)	43, 93, 121, 1011
AluI	AGCT	4 cut(s)	43, 93, 121, 1011
Alw21I	GWGCWC	1 cut(s)	1143
Alw26I	GTCTC	6 cut(s)	45, 549, 836, 1160, 1547, 1737
AlwI	GGATC	2 cut(s)	44, 1359
Ama87I	CYCGRG	1 cut(s)	79
AoxI	GGCC	2 cut(s)	27, 1720
ApeKI	GCWGC	2 cut(s)	43, 212
ApoI	RAATTY	2 cut(s)	765, 871
ArsI	GACNNNNNNTTYG	2 cut(s)	814, 846
AspLEI	GCGC	2 cut(s)	186, 654
AspS9I	GGNCC	2 cut(s)	838, 1622
AsuC2I	CCSGG	1 cut(s)	743
AsuHPI	GGTGA	4 cut(s)	443, 550, 560, 1540
AsuII	TTCGAA	1 cut(s)	1657
AvaI	CYCGRG	1 cut(s)	79
AvaII	GGWCC	2 cut(s)	838, 1622
AxyI	CCTNAGG	1 cut(s)	1347
BarI	GAAGNNNNNNTAC	2 cut(s)	1389, 1421
BauI	CACGAG	1 cut(s)	833
BbsI	GAAGAC	2 cut(s)	1142, 1666
Bbv12I	GWGCWC	1 cut(s)	1143
BbvCI	CCTCAGC	1 cut(s)	987
BbvI	GCAGC	2 cut(s)	30, 199
BccI	CCATC	5 cut(s)	586, 1043, 1139, 1312, 1712
BceAI	ACGGC	1 cut(s)	1524
BcgI	CGANNNNNNTGC	2 cut(s)	60, 94
BciT130I	CCWGG	1 cut(s)	885
BciVI	GTATCC	1 cut(s)	821
BcnI	CCSGG	1 cut(s)	743
BcoDI	GTCTC	6 cut(s)	45, 549, 836, 1160, 1547, 1737
BfaI	CTAG	1 cut(s)	995
BfmI	CTRYAG	2 cut(s)	62, 805
BfoI	RGCGCY	1 cut(s)	655
BfuI	GTATCC	1 cut(s)	821
BglII	AGATCT	1 cut(s)	1487
BisI	GCNGC	4 cut(s)	44, 213, 598, 1723
BlsI	GCNGC	4 cut(s)	45, 214, 599, 1724
BmcAI	AGTACT	1 cut(s)	1191
Bme1390I	CCNGG	2 cut(s)	743, 885
Bme18I	GGWCC	2 cut(s)	838, 1622
BmeT110I	CYCGRG	1 cut(s)	79
BmgT120I	GGNCC	2 cut(s)	838, 1622
BmiI	GGNNCC	1 cut(s)	1623
BmrFI	CCNGG	2 cut(s)	743, 885
BmsI	GCATC	7 cut(s)	120, 139, 199, 968, 988, 1089, 1545
BpiI	GAAGAC	2 cut(s)	1142, 1666
BpmI	CTGGAG	1 cut(s)	186
Bpu10I	CCTNAGC	1 cut(s)	987
Bpu14I	TTCGAA	1 cut(s)	1657
BpuEI	CTTGAG	1 cut(s)	843
BpuMI	CCSGG	1 cut(s)	743
BsaBI	GATNNNNATC	1 cut(s)	1034
BsaI	GGTCTC	1 cut(s)	1737
BsaJI	CCNNGG	1 cut(s)	741
BsaWI	WCCGGW	1 cut(s)	1624
BsaXI	ACNNNNNCTCC	4 cut(s)	262, 267, 292, 297
Bsc4I	CCNNNNNNNGG	1 cut(s)	1675
Bse1I	ACTGG	3 cut(s)	169, 540, 1482
Bse21I	CCTNAGG	1 cut(s)	1347
Bse8I	GATNNNNATC	1 cut(s)	1034
BseBI	CCWGG	1 cut(s)	885
BseDI	CCNNGG	1 cut(s)	741
BseGI	GGATG	5 cut(s)	57, 597, 712, 790, 959
BseJI	GATNNNNATC	1 cut(s)	1034
BseLI	CCNNNNNNNGG	1 cut(s)	1675
BseMII	CTCAG	3 cut(s)	914, 1001, 1338
BseNI	ACTGG	3 cut(s)	169, 540, 1482
BseRI	GAGGAG	3 cut(s)	283, 288, 1601
BseXI	GCAGC	2 cut(s)	30, 199
BseYI	CCCAGC	1 cut(s)	1011
BshFI	GGCC	2 cut(s)	29, 1722
BsiHKAI	GWGCWC	1 cut(s)	1143
BsiHKCI	CYCGRG	1 cut(s)	79
BsiSI	CCGG	3 cut(s)	743, 916, 1625
BslFI	GGGAC	1 cut(s)	1574
BslI	CCNNNNNNNGG	1 cut(s)	1675
BsmAI	GTCTC	6 cut(s)	45, 549, 836, 1160, 1547, 1737
BsmBI	CGTCTC	3 cut(s)	549, 1160, 1547
BsmFI	GGGAC	1 cut(s)	1574
BsnI	GGCC	2 cut(s)	29, 1722
Bso31I	GGTCTC	1 cut(s)	1737
BsoBI	CYCGRG	1 cut(s)	79
Bsp119I	TTCGAA	1 cut(s)	1657
Bsp1286I	GDGCHC	1 cut(s)	1143
Bsp143I	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
BspACI	CCGC	3 cut(s)	597, 1558, 1723
BspANI	GGCC	2 cut(s)	29, 1722
BspCNI	CTCAG	3 cut(s)	913, 1000, 1339
BspHI	TCATGA	2 cut(s)	487, 1354
BspLI	GGNNCC	1 cut(s)	1623
BspPI	GGATC	2 cut(s)	44, 1359
BspT104I	TTCGAA	1 cut(s)	1657
BspTNI	GGTCTC	1 cut(s)	1737
BsrI	ACTGG	3 cut(s)	169, 540, 1482
BssECI	CCNNGG	1 cut(s)	741
BssMI	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
BssNAI	GTATAC	1 cut(s)	1210
BssSI	CACGAG	1 cut(s)	833
Bst1107I	GTATAC	1 cut(s)	1210
Bst2BI	CACGAG	1 cut(s)	833
Bst2UI	CCWGG	1 cut(s)	885
Bst4CI	ACNGT	4 cut(s)	283, 572, 1020, 1171
Bst6I	CTCTTC	2 cut(s)	711, 1708
BstBI	TTCGAA	1 cut(s)	1657
BstC8I	GCNNGC	6 cut(s)	69, 108, 310, 957, 1143, 1571
BstDEI	CTNAG	4 cut(s)	900, 987, 1154, 1347
BstF5I	GGATG	5 cut(s)	57, 597, 712, 790, 959
BstH2I	RGCGCY	1 cut(s)	655
BstHHI	GCGC	2 cut(s)	186, 654
BstKTI	GATC	5 cut(s)	39, 334, 1354, 1490, 1552
BstMAI	GTCTC	6 cut(s)	45, 549, 836, 1160, 1547, 1737
BstMBI	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
BstMWI	GCNNNNNNNGC	1 cut(s)	956
BstNI	CCWGG	1 cut(s)	885
BstSCI	CCNGG	2 cut(s)	741, 883
BstSFI	CTRYAG	2 cut(s)	62, 805
BstV1I	GCAGC	2 cut(s)	30, 199
BstV2I	GAAGAC	2 cut(s)	1142, 1666
BstX2I	RGATCY	1 cut(s)	1487
BstYI	RGATCY	1 cut(s)	1487
BstZ17I	GTATAC	1 cut(s)	1210
Bsu36I	CCTNAGG	1 cut(s)	1347
BsuI	GTATCC	1 cut(s)	821
BsuRI	GGCC	2 cut(s)	29, 1722
BtsCI	GGATG	5 cut(s)	57, 597, 712, 790, 959
BtsIMutI	CAGTG	2 cut(s)	325, 1141
Cac8I	GCNNGC	6 cut(s)	69, 108, 310, 957, 1143, 1571
CciI	TCATGA	2 cut(s)	487, 1354
CfoI	GCGC	2 cut(s)	186, 654
Cfr13I	GGNCC	2 cut(s)	838, 1622
CseI	GACGC	1 cut(s)	17
Csp6I	GTAC	2 cut(s)	279, 1190
CviAII	CATG	5 cut(s)	488, 1003, 1355, 1427, 1547
CviQI	GTAC	2 cut(s)	279, 1190
DdeI	CTNAG	4 cut(s)	900, 987, 1154, 1347
DpnI	GATC	5 cut(s)	38, 333, 1353, 1489, 1551
DpnII	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
EaeI	YGGCCR	2 cut(s)	27, 1720
Eam1104I	CTCTTC	2 cut(s)	711, 1708
EarI	CTCTTC	2 cut(s)	711, 1708
Eco31I	GGTCTC	1 cut(s)	1737
Eco47I	GGWCC	2 cut(s)	838, 1622
Eco81I	CCTNAGG	1 cut(s)	1347
Eco88I	CYCGRG	1 cut(s)	79
EcoRI	GAATTC	1 cut(s)	871
EcoRII	CCWGG	1 cut(s)	883
Esp3I	CGTCTC	3 cut(s)	549, 1160, 1547
FaeI	CATG	5 cut(s)	491, 1006, 1358, 1430, 1550
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 427, 459
FaqI	GGGAC	1 cut(s)	1574
FatI	CATG	5 cut(s)	487, 1002, 1354, 1426, 1546
FauI	CCCGC	1 cut(s)	1551
FauNDI	CATATG	2 cut(s)	851, 1459
FblI	GTMKAC	3 cut(s)	1120, 1159, 1209
Fnu4HI	GCNGC	4 cut(s)	44, 213, 598, 1723
FokI	GGATG	5 cut(s)	44, 604, 719, 797, 946
Fsp4HI	GCNGC	4 cut(s)	44, 213, 598, 1723
FspAI	RTGCGCAY	1 cut(s)	185
FspBI	CTAG	1 cut(s)	995
FspI	TGCGCA	1 cut(s)	185
GlaI	GCGC	2 cut(s)	185, 653
GluI	GCNGC	4 cut(s)	44, 213, 598, 1723
GsaI	CCCAGC	1 cut(s)	1015
GsuI	CTGGAG	1 cut(s)	186
HaeII	RGCGCY	1 cut(s)	655
HaeIII	GGCC	2 cut(s)	29, 1722
HapII	CCGG	3 cut(s)	743, 916, 1625
HgaI	GACGC	1 cut(s)	17
HhaI	GCGC	2 cut(s)	186, 654
Hin1II	CATG	5 cut(s)	491, 1006, 1358, 1430, 1550
Hin6I	GCGC	2 cut(s)	184, 652
HinP1I	GCGC	2 cut(s)	184, 652
HincII	GTYRAC	1 cut(s)	1609
HindII	GTYRAC	1 cut(s)	1609
HinfI	GANTC	7 cut(s)	87, 155, 239, 856, 888, 1252, 1378
HpaI	GTTAAC	1 cut(s)	1609
HpaII	CCGG	3 cut(s)	743, 916, 1625
HphI	GGTGA	4 cut(s)	443, 550, 560, 1540
Hpy166II	GTNNAC	4 cut(s)	1121, 1160, 1210, 1609
Hpy188I	TCNGA	5 cut(s)	50, 352, 936, 1420, 1554
Hpy8I	GTNNAC	4 cut(s)	1121, 1160, 1210, 1609
HpyAV	CCTTC	5 cut(s)	26, 692, 1391, 1419, 1519
HpyCH4III	ACNGT	4 cut(s)	283, 572, 1020, 1171
HpyF10VI	GCNNNNNNNGC	1 cut(s)	956
HpyF3I	CTNAG	4 cut(s)	900, 987, 1154, 1347
Hsp92II	CATG	5 cut(s)	491, 1006, 1358, 1430, 1550
HspAI	GCGC	2 cut(s)	184, 652
KspAI	GTTAAC	1 cut(s)	1609
Kzo9I	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
Lsp1109I	GCAGC	2 cut(s)	30, 199
LweI	GCATC	7 cut(s)	120, 139, 199, 968, 988, 1089, 1545
MaeI	CTAG	1 cut(s)	995
MaeIII	GTNAC	2 cut(s)	566, 1366
MalI	GATC	5 cut(s)	38, 333, 1353, 1489, 1551
MboI	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
MflI	RGATCY	1 cut(s)	1487
MhlI	GDGCHC	1 cut(s)	1143
MluCI	AATT	9 cut(s)	254, 354, 363, 726, 765, 871, 1065, 1085, 1382
MlyI	GAGTC	4 cut(s)	96, 850, 1261, 1372
MmeI	TCCRAC	3 cut(s)	330, 495, 1483
MseI	TTAA	8 cut(s)	251, 297, 453, 551, 725, 729, 1313, 1608
MslI	CAYNNNNRTG	1 cut(s)	1136
MspI	CCGG	3 cut(s)	743, 916, 1625
MspR9I	CCNGG	2 cut(s)	743, 885
MvaI	CCWGG	1 cut(s)	885
MwoI	GCNNNNNNNGC	1 cut(s)	956
NciI	CCSGG	1 cut(s)	743
NdeI	CATATG	2 cut(s)	851, 1459
NdeII	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
NlaIII	CATG	5 cut(s)	491, 1006, 1358, 1430, 1550
NlaIV	GGNNCC	1 cut(s)	1623
NmuCI	GTSAC	1 cut(s)	566
NsbI	TGCGCA	1 cut(s)	185
NspV	TTCGAA	1 cut(s)	1657
PacI	TTAATTAA	1 cut(s)	729
PaeR7I	CTCGAG	1 cut(s)	79
PagI	TCATGA	2 cut(s)	487, 1354
PfeI	GAWTC	3 cut(s)	155, 239, 888
PkrI	GCNGC	4 cut(s)	45, 214, 599, 1724
PleI	GAGTC	4 cut(s)	95, 850, 1260, 1372
PpsI	GAGTC	4 cut(s)	95, 850, 1260, 1372
PsiI	TTATAA	1 cut(s)	408
Psp6I	CCWGG	1 cut(s)	883
PspFI	CCCAGC	1 cut(s)	1011
PspGI	CCWGG	1 cut(s)	883
PspN4I	GGNNCC	1 cut(s)	1623
PspPI	GGNCC	2 cut(s)	838, 1622
PspXI	VCTCGAGB	1 cut(s)	79
PsuI	RGATCY	1 cut(s)	1487
RsaI	GTAC	2 cut(s)	280, 1191
RsaNI	GTAC	2 cut(s)	279, 1190
RseI	CAYNNNNRTG	1 cut(s)	1136
SaqAI	TTAA	8 cut(s)	251, 297, 453, 551, 725, 729, 1313, 1608
SatI	GCNGC	4 cut(s)	44, 213, 598, 1723
Sau3AI	GATC	5 cut(s)	36, 331, 1351, 1487, 1549
Sau96I	GGNCC	2 cut(s)	838, 1622
ScaI	AGTACT	1 cut(s)	1191
SchI	GAGTC	4 cut(s)	96, 850, 1261, 1372
ScrFI	CCNGG	2 cut(s)	743, 885
SduI	GDGCHC	1 cut(s)	1143
SfaNI	GCATC	7 cut(s)	120, 139, 199, 968, 988, 1089, 1545
SfcI	CTRYAG	2 cut(s)	62, 805
Sfr274I	CTCGAG	1 cut(s)	79
SfuI	TTCGAA	1 cut(s)	1657
SinI	GGWCC	2 cut(s)	838, 1622
SlaI	CTCGAG	1 cut(s)	79
SmiMI	CAYNNNNRTG	1 cut(s)	1136
SmlI	CTYRAG	2 cut(s)	79, 858
SmoI	CTYRAG	2 cut(s)	79, 858
Sse9I	AATT	9 cut(s)	254, 354, 363, 726, 765, 871, 1065, 1085, 1382
SsiI	CCGC	3 cut(s)	597, 1558, 1723
SspMI	CTAG	1 cut(s)	995
StyD4I	CCNGG	2 cut(s)	741, 883
TaaI	ACNGT	4 cut(s)	283, 572, 1020, 1171
TaqI	TCGA	5 cut(s)	80, 117, 392, 875, 1657
TaqII	GACCGA	1 cut(s)	386
TasI	AATT	9 cut(s)	254, 354, 363, 726, 765, 871, 1065, 1085, 1382
TatI	WGTACW	1 cut(s)	1189
TauI	GCSGC	2 cut(s)	600, 1725
TfiI	GAWTC	3 cut(s)	155, 239, 888
Tru1I	TTAA	8 cut(s)	251, 297, 453, 551, 725, 729, 1313, 1608
Tru9I	TTAA	8 cut(s)	251, 297, 453, 551, 725, 729, 1313, 1608
TscAI	CASTG	2 cut(s)	325, 1141
TseFI	GTSAC	1 cut(s)	566
TseI	GCWGC	2 cut(s)	43, 212
Tsp45I	GTSAC	1 cut(s)	566
TspDTI	ATGAA	6 cut(s)	189, 504, 657, 791, 801, 1086
TspGWI	ACGGA	1 cut(s)	573
TspRI	CASTG	2 cut(s)	325, 1141
VpaK11BI	GGWCC	2 cut(s)	838, 1622
XapI	RAATTY	2 cut(s)	765, 871
XbaI	TCTAGA	1 cut(s)	994
XhoI	CTCGAG	1 cut(s)	79
XmiI	GTMKAC	3 cut(s)	1120, 1159, 1209
XspI	CTAG	1 cut(s)	995
ZrmI	AGTACT	1 cut(s)	1191

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.