AT1G58410

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
Physical Location & Seq
Reverse (-)
21701185 .. 21704982
3798 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G58410.4

Sequence Viewer

Length: 2700 bp
ATGGAACTTGTGTCGTTTGGAGTAGAAAAGCTTTGGGACCGACTGAGCCAAGAATATGACCAATTTAAAGGAGTTGAAGATCAAGTAACTGAGTTAAAAAGTAACCTAAACTTGTTAAAGTCATTTTTGAAAGATGCAGATGCCAAGAAACATATAAGTGAGATGGTGCGACACTGTGTGGAAGAGATCAAAGATATTGTTTATGACACGGAGGACATAATCGAAACGTTTATTCTCAAGGAAAAAGTTGAAATGAAACGTGGCATCATGAAGCGTATCAAAAGATTTGCTTCGACTATAATGGATCGTAGGGAACTTGCGTCTGATATTGGAGGAATAAGTAAGCGGATCTCCAAGGTGATACAGGATATGCAAAGTTTTGGAGTACAACAGATAATTACTGATGGCAGCCGTTCTTCACATCCACTACAAGAAAGACAAAGGGAGATGCGGCACACGTTTTCTAGGGACTCCGAAAACGATTTTGTGGGAATGGAAGCAAATGTTAAGAAATTGGTTGGATATTTGGTGGAGAAAGATGACTATCAAATTGTTTCTTTAACCGGGATGGGTGGTCTTGGTAAAACCACCCTTGCTAGACAAGTTTTTAATCATGATGTTGTAAAAGATCGGTTTGATGGATTCGCATGGGTGAGTGTTTCGCAAGAGTTTACTCGGATATCGGTGTGGCAAACGATCTTGCAGAATCTCACATCTAAAGAGAGGAAAGATGAAATCCAGAATATGAAAGAAGCTGACCTTCATGATGATCTCTTCCGATTGTTGGAATCATCTAAAACATTAATTGTGCTAGATGACATATGGAAAGAAGAAGATTGGGACTTAATCAAGCCAATATTTCCACCCAAAAAAGGTTGGAAGGTGCTACTTACTTCTCGAACTGAGAGTATCGCGATGCGTGGAGATACAACATATATTAGCTTTAAACCAAAATGCCTATCTATCCCAGACAGTTGGACACTTTTCCAAAGCATAGCAATGCCAAGGAAAGATACATCCGAATTTAAGGTTGATGAGGAAATGGAAAATATGGGTAAGAAGATGATCAAACATTGTGGAGGACTATCATTGGCTGTCAAAGTCTTAGGAGGGTTGTTAGCTGCAAAATACACACTGCATGATTGGAAAAGATTATCTGAGAATATTGGATCTCATATCGTGGAAAGAACTAGCGGTAACAACAGTTCTATTGATCATGTATTGTCTGTGAGCTTTGAAGAATTGCCTAATTATTTGAAGCATTGTTTCCTATACCTCGCCCACTTTCCAGAAGATCATGAGATAGACGTAGAGAAGTTGCATTATTATTGGGCTGCAGAAGGAATATCTGAACGTAGGCGTTACGATGGAGAGACCATTCGAGATACTGGAGATAGCTACATAGAGGAGTTGGTGAGAAGAAATATGGTTATTTCTGAAAGGGACGTTATGACTTCCAGATTTGAAACTTGTCGTTTGCATGACATGATGAGAGAAATTTGTTTGTTTAAAGCCAAAGAAGAGAACTTCCTACAAATTGTCAGTAACCACTCCCCGACATCAAACCCTCAAACTCTTGGTGCTTCTCGCAGATTTGTCTTACATAATCCTACTACATTACATGTTGAGAGATATAAAAATAATCCAAAACTTCGATCGCTCGTGGTTGTCTATGATGATATTGGAAATAGAAGATGGATGCTATCAGGTTCAATCTTTACAAGGGTAAAACTTCTACGGGTGTTAGATCTCGTTCAAGCCAAGTTTAAAGGAGGGAAGTTACCTTCTGACATTGGAAAGCTCATCCACTTAAGATACTTGAGCTTAAAAGATGCCAAGGTATCTCATCTACCTTCTTCTCTAAGAAATCTAGTCCTGCTAATCTATTTAGATATACGCACAGATTTCACGGATATATTCGTGCCCAATGTCTTCATGGGGATGAGAGAATTGAGATATCTTGAACTACCCAGATTTATGCATGAGAAGACAAAGTTGGAGTTGAGTAATCTAGAAAAATTGGAGGCCTTAGAGAATTTCTCAACAAAGAGTAGCAGCTTGGAGGATCTCCGTGGTATGGTCAGGTTGAGGACTCTTGTGATCATTTTAAGTGAGGGGACTAGTCTACAAACTCTATCTGCATCAGTATGTGGACTGAGACACTTGGAAAATTTTAAAATAATGGAAAACGCTGGCGTTAACAGGATGGGAGAAGAGAGAATGGTATTGGATTTCACTTATCTCAAAAAGCTCACCTTGAGTATAGAGATGCCAAGGCTTCCTAAAATACAACACCTTCCTTCTCACCTTACGGTCTTAGATCTATCTTACTGTTGTTTGGAGGAAGATCCAATGCCGATTCTAGAGAAATTACTCGAGTTAAAAGATTTAAGTTTAGATTATCTATCTTTCTCCGGGAGGAAAATGGTTTGCTCGGCTGGTGGGTTTCCTCAATTGCGTAAGCTAGCTTTGGATGAACAAGAGGAGTGGGAAGAGTGGATAGTAGAAGAAGGCTCCATGTCACGGCTTCATACTCTAAGTATTTGGAGTTCAACATTAAAGGAGCTTCCTGATGGGCTGCGATTCATATATTCTTTAAAGAATCTGATCATGGGAAAGAGCTGGATGGAGAGATTATCGGAACGAGGAGAAGAATTTTACAAAGTTCAAAACATTCCTTTTATTAAATTCAGTTCTTAA

Protein Analysis

899

Amino Acids

104.33

Weight (kDa)

6.62

Isoelectric Point (pI)

42.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 4 - 83 2.1e-21 Rx N-terminal domain
NB-ARC PF00931 166 - 338 5e-51 NB-ARC domain
WHD_DRP PF23559 429 - 500 6.6e-13 Disease resistance protein Winged helix domain
LRR_14 PF23598 551 - 867 4.3e-36 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 2125
AccII CGCG 1 cut(s) 914
AciI CCGC 3 cut(s) 346, 451, 1194
AclI AACGTT 1 cut(s) 227
AclWI GGATC 5 cut(s) 312, 356, 1177, 2073, 2342
AcsI RAATTY 6 cut(s) 1022, 1497, 2035, 2170, 2654, 2687
AdeI CACNNNGTG 1 cut(s) 178
AfaI GTAC 1 cut(s) 387
AfiI CCNNNNNNNGG 4 cut(s) 784, 872, 2077, 2523
AflII CTTAAG 1 cut(s) 1810
AflIII ACRYGT 2 cut(s) 456, 1621
AhlI ACTAGT 1 cut(s) 2120
AjuI GAANNNNNNNTTGG 2 cut(s) 1979, 2011
Alw26I GTCTC 2 cut(s) 1367, 2152
AlwI GGATC 5 cut(s) 312, 356, 1177, 2073, 2342
Ama87I CYCGRG 1 cut(s) 2375
AoxI GGCC 1 cut(s) 2025
ApeKI GCWGC 5 cut(s) 408, 1121, 1334, 2055, 2578
ApoI RAATTY 6 cut(s) 1022, 1497, 2035, 2170, 2654, 2687
AseI ATTAAT 1 cut(s) 803
AspS9I GGNCC 1 cut(s) 37
AsuC2I CCSGG 2 cut(s) 565, 2416
AsuHPI GGTGA 5 cut(s) 370, 664, 1426, 2245, 2297
AsuNHI GCTAGC 1 cut(s) 2464
AvaI CYCGRG 1 cut(s) 2375
AvaII GGWCC 1 cut(s) 37
BaeGI GKGCMC 1 cut(s) 1926
BauI CACGAG 1 cut(s) 1661
BbsI GAAGAC 2 cut(s) 1924, 1994
BbvI GCAGC 5 cut(s) 420, 1108, 1321, 2067, 2565
BccI CCATC 9 cut(s) 157, 398, 562, 632, 1361, 1689, 2200, 2567, 2620
BceAI ACGGC 2 cut(s) 396, 2540
BclI TGATCA 4 cut(s) 1065, 1213, 2100, 2607
BcnI CCSGG 2 cut(s) 565, 2416
BcoDI GTCTC 2 cut(s) 1367, 2152
BcuI ACTAGT 1 cut(s) 2120
BfaI CTAG 9 cut(s) 465, 597, 812, 1191, 1871, 2012, 2121, 2363, 2465
BfmI CTRYAG 1 cut(s) 1335
BfrI CTTAAG 1 cut(s) 1810
BglII AGATCT 2 cut(s) 1747, 2320
BisI GCNGC 6 cut(s) 409, 452, 1122, 1335, 2056, 2579
BlsI GCNGC 6 cut(s) 410, 453, 1123, 1336, 2057, 2580
Bme1390I CCNGG 2 cut(s) 565, 2416
Bme18I GGWCC 1 cut(s) 37
BmeT110I CYCGRG 1 cut(s) 2375
BmgT120I GGNCC 1 cut(s) 37
BmiI GGNNCC 2 cut(s) 38, 2515
BmrFI CCNGG 2 cut(s) 565, 2416
BmsI GCATC 9 cut(s) 124, 130, 273, 438, 906, 1689, 1822, 2150, 2259
BmtI GCTAGC 1 cut(s) 2468
BpiI GAAGAC 2 cut(s) 1924, 1994
BplI GAGNNNNNCTC 2 cut(s) 2024, 2056
BpmI CTGGAG 1 cut(s) 1410
BpuEI CTTGAG 3 cut(s) 221, 1840, 2278
BpuMI CCSGG 2 cut(s) 565, 2416
BsaBI GATNNNNATC 1 cut(s) 543
BsaI GGTCTC 1 cut(s) 1367
BsaJI CCNNGG 5 cut(s) 354, 1004, 1836, 2071, 2273
Bsc4I CCNNNNNNNGG 4 cut(s) 784, 872, 2077, 2523
Bse1I ACTGG 1 cut(s) 1393
Bse3DI GCAATG 1 cut(s) 1005
Bse8I GATNNNNATC 1 cut(s) 543
BseDI CCNNGG 5 cut(s) 354, 1004, 1836, 2071, 2273
BseGI GGATG 9 cut(s) 421, 573, 1016, 1704, 1803, 1947, 2211, 2479, 2631
BseJI GATNNNNATC 1 cut(s) 543
BseLI CCNNNNNNNGG 4 cut(s) 784, 872, 2077, 2523
BseMI GCAATG 1 cut(s) 1005
BseMII CTCAG 5 cut(s) 35, 81, 894, 1149, 2147
BseNI ACTGG 1 cut(s) 1393
BseRI GAGGAG 3 cut(s) 1421, 2498, 2661
BseSI GKGCMC 1 cut(s) 1926
BseXI GCAGC 5 cut(s) 420, 1108, 1321, 2067, 2565
Bsh1236I CGCG 1 cut(s) 914
Bsh1285I CGRYCG 1 cut(s) 1658
BshFI GGCC 1 cut(s) 2027
BsiEI CGRYCG 1 cut(s) 1658
BsiHKCI CYCGRG 1 cut(s) 2375
BsiSI CCGG 2 cut(s) 564, 2415
BslFI GGGAC 5 cut(s) 50, 482, 854, 1457, 2131
BslI CCNNNNNNNGG 4 cut(s) 784, 872, 2077, 2523
BsmAI GTCTC 2 cut(s) 1367, 2152
BsmFI GGGAC 5 cut(s) 50, 482, 854, 1457, 2131
BsnI GGCC 1 cut(s) 2027
Bso31I GGTCTC 1 cut(s) 1367
BsoBI CYCGRG 1 cut(s) 2375
Bsp1286I GDGCHC 1 cut(s) 1926
Bsp68I TCGCGA 1 cut(s) 914
BspACI CCGC 3 cut(s) 346, 451, 1194
BspANI GGCC 1 cut(s) 2027
BspCNI CTCAG 5 cut(s) 36, 82, 895, 1150, 2148
BspFNI CGCG 1 cut(s) 914
BspHI TCATGA 4 cut(s) 267, 613, 763, 1297
BspLI GGNNCC 2 cut(s) 38, 2515
BspMAI CTGCAG 1 cut(s) 1339
BspOI GCTAGC 1 cut(s) 2468
BspPI GGATC 5 cut(s) 312, 356, 1177, 2073, 2342
BspTI CTTAAG 1 cut(s) 1810
BspTNI GGTCTC 1 cut(s) 1367
BsrDI GCAATG 1 cut(s) 1005
BsrI ACTGG 1 cut(s) 1393
BssECI CCNNGG 5 cut(s) 354, 1004, 1836, 2071, 2273
BssSI CACGAG 1 cut(s) 1661
BssT1I CCWWGG 4 cut(s) 354, 1004, 1836, 2273
Bst2BI CACGAG 1 cut(s) 1661
Bst4CI ACNGT 5 cut(s) 176, 974, 1205, 2314, 2333
Bst6I CTCTTC 5 cut(s) 177, 779, 1515, 2208, 2487
BstAFI CTTAAG 1 cut(s) 1810
BstC8I GCNNGC 2 cut(s) 2194, 2466
BstDSI CCRYGG 1 cut(s) 2071
BstF5I GGATG 9 cut(s) 421, 573, 1016, 1704, 1803, 1947, 2211, 2479, 2631
BstFNI CGCG 1 cut(s) 914
BstMAI GTCTC 2 cut(s) 1367, 2152
BstMCI CGRYCG 1 cut(s) 1658
BstNSI RCATGY 1 cut(s) 1625
BstSCI CCNGG 2 cut(s) 563, 2414
BstSFI CTRYAG 1 cut(s) 1335
BstSLI GKGCMC 1 cut(s) 1926
BstUI CGCG 1 cut(s) 914
BstV1I GCAGC 5 cut(s) 420, 1108, 1321, 2067, 2565
BstV2I GAAGAC 2 cut(s) 1924, 1994
BstX2I RGATCY 6 cut(s) 348, 1169, 1747, 2065, 2320, 2347
BstXI CCANNNNNNTGG 1 cut(s) 975
BstYI RGATCY 6 cut(s) 348, 1169, 1747, 2065, 2320, 2347
BsuRI GGCC 1 cut(s) 2027
BtgI CCRYGG 1 cut(s) 2071
BtgZI GCGATG 1 cut(s) 929
BtsCI GGATG 9 cut(s) 421, 573, 1016, 1704, 1803, 1947, 2211, 2479, 2631
BtsI GCAGTG 1 cut(s) 1133
BtsIMutI CAGTG 2 cut(s) 172, 1133
BtuMI TCGCGA 1 cut(s) 914
Cac8I GCNNGC 2 cut(s) 2194, 2466
CciI TCATGA 4 cut(s) 267, 613, 763, 1297
Cfr13I GGNCC 1 cut(s) 37
CseI GACGC 1 cut(s) 309
Csp6I GTAC 1 cut(s) 386
CspCI CAANNNNNGTGG 4 cut(s) 1057, 1092, 2468, 2503
CviQI GTAC 1 cut(s) 386
DraI TTTAAA 6 cut(s) 67, 946, 1510, 1768, 2176, 2598
DraIII CACNNNGTG 1 cut(s) 178
Eam1104I CTCTTC 5 cut(s) 177, 779, 1515, 2208, 2487
EarI CTCTTC 5 cut(s) 177, 779, 1515, 2208, 2487
Eco130I CCWWGG 4 cut(s) 354, 1004, 1836, 2273
Eco147I AGGCCT 1 cut(s) 2027
Eco31I GGTCTC 1 cut(s) 1367
Eco32I GATATC 2 cut(s) 681, 1958
Eco47I GGWCC 1 cut(s) 37
Eco88I CYCGRG 1 cut(s) 2375
EcoRV GATATC 2 cut(s) 681, 1958
EcoT14I CCWWGG 4 cut(s) 354, 1004, 1836, 2273
EcoT22I ATGCAT 1 cut(s) 1983
ErhI CCWWGG 4 cut(s) 354, 1004, 1836, 2273
FalI AAGNNNNNCTT 6 cut(s) 274, 306, 744, 776, 2240, 2272
FaqI GGGAC 5 cut(s) 50, 482, 854, 1457, 2131
FauNDI CATATG 1 cut(s) 821
FbaI TGATCA 4 cut(s) 1065, 1213, 2100, 2607
FblI GTMKAC 1 cut(s) 2125
Fnu4HI GCNGC 6 cut(s) 409, 452, 1122, 1335, 2056, 2579
FokI GGATG 9 cut(s) 408, 580, 1003, 1711, 1790, 1954, 2218, 2486, 2638
Fsp4HI GCNGC 6 cut(s) 409, 452, 1122, 1335, 2056, 2579
FspBI CTAG 9 cut(s) 465, 597, 812, 1191, 1871, 2012, 2121, 2363, 2465
GluI GCNGC 6 cut(s) 409, 452, 1122, 1335, 2056, 2579
GsuI CTGGAG 1 cut(s) 1410
HaeIII GGCC 1 cut(s) 2027
HapII CCGG 2 cut(s) 564, 2415
HgaI GACGC 1 cut(s) 309
HincII GTYRAC 1 cut(s) 2200
HindII GTYRAC 1 cut(s) 2200
HindIII AAGCTT 1 cut(s) 29
HinfI GANTC 8 cut(s) 470, 642, 706, 788, 2092, 2359, 2583, 2602
HpaI GTTAAC 1 cut(s) 2200
HpaII CCGG 2 cut(s) 564, 2415
HphI GGTGA 5 cut(s) 370, 664, 1426, 2245, 2297
Hpy166II GTNNAC 4 cut(s) 672, 2126, 2153, 2200
Hpy8I GTNNAC 4 cut(s) 672, 2126, 2153, 2200
HpyAV CCTTC 8 cut(s) 770, 874, 1334, 1794, 1863, 2306, 2310, 2504
HpyCH4III ACNGT 5 cut(s) 176, 974, 1205, 2314, 2333
HpyCH4IV ACGT 6 cut(s) 227, 259, 458, 1308, 1354, 1446
HpySE526I ACGT 6 cut(s) 227, 259, 458, 1308, 1354, 1446
Ksp22I TGATCA 4 cut(s) 1065, 1213, 2100, 2607
KspAI GTTAAC 1 cut(s) 2200
LmnI GCTCC 2 cut(s) 2519, 2563
Lsp1109I GCAGC 5 cut(s) 420, 1108, 1321, 2067, 2565
LweI GCATC 9 cut(s) 124, 130, 273, 438, 906, 1689, 1822, 2150, 2259
MaeI CTAG 9 cut(s) 465, 597, 812, 1191, 1871, 2012, 2121, 2363, 2465
MaeII ACGT 6 cut(s) 227, 259, 458, 1308, 1354, 1446
MaeIII GTNAC 7 cut(s) 85, 101, 1196, 1361, 1544, 1779, 2520
MfeI CAATTG 1 cut(s) 2453
MflI RGATCY 6 cut(s) 348, 1169, 1747, 2065, 2320, 2347
MhlI GDGCHC 1 cut(s) 1926
MlyI GAGTC 2 cut(s) 464, 2086
MmeI TCCRAC 5 cut(s) 499, 765, 857, 956, 1977
Mph1103I ATGCAT 1 cut(s) 1983
MslI CAYNNNNRTG 4 cut(s) 156, 998, 1940, 2146
MspCI CTTAAG 1 cut(s) 1810
MspI CCGG 2 cut(s) 564, 2415
MspR9I CCNGG 2 cut(s) 565, 2416
MunI CAATTG 1 cut(s) 2453
MvnI CGCG 1 cut(s) 914
NciI CCSGG 2 cut(s) 565, 2416
NdeI CATATG 1 cut(s) 821
NheI GCTAGC 1 cut(s) 2464
NlaIV GGNNCC 2 cut(s) 38, 2515
NmeAIII GCCGAG 1 cut(s) 2414
NmuCI GTSAC 1 cut(s) 2520
NruI TCGCGA 1 cut(s) 914
NsiI ATGCAT 1 cut(s) 1983
NspI RCATGY 1 cut(s) 1625
PaeR7I CTCGAG 1 cut(s) 2375
PagI TCATGA 4 cut(s) 267, 613, 763, 1297
PceI AGGCCT 1 cut(s) 2027
PciI ACATGT 1 cut(s) 1621
PfeI GAWTC 6 cut(s) 642, 706, 788, 2359, 2583, 2602
PfoI TCCNGGA 1 cut(s) 2414
PkrI GCNGC 6 cut(s) 410, 453, 1123, 1336, 2057, 2580
Ple19I CGATCG 1 cut(s) 1658
PleI GAGTC 2 cut(s) 464, 2086
PpsI GAGTC 2 cut(s) 464, 2086
PscI ACATGT 1 cut(s) 1621
PshBI ATTAAT 1 cut(s) 803
Psp1406I AACGTT 1 cut(s) 227
PspN4I GGNNCC 2 cut(s) 38, 2515
PspPI GGNCC 1 cut(s) 37
PspXI VCTCGAGB 1 cut(s) 2375
PsrI GAACNNNNNNTAC 4 cut(s) 1189, 1221, 2533, 2565
PstI CTGCAG 1 cut(s) 1339
PsuI RGATCY 6 cut(s) 348, 1169, 1747, 2065, 2320, 2347
PvuI CGATCG 1 cut(s) 1658
RruI TCGCGA 1 cut(s) 914
RsaI GTAC 1 cut(s) 387
RsaNI GTAC 1 cut(s) 386
RseI CAYNNNNRTG 4 cut(s) 156, 998, 1940, 2146
SatI GCNGC 6 cut(s) 409, 452, 1122, 1335, 2056, 2579
Sau96I GGNCC 1 cut(s) 37
SchI GAGTC 2 cut(s) 464, 2086
ScrFI CCNGG 2 cut(s) 565, 2416
SduI GDGCHC 1 cut(s) 1926
SfaNI GCATC 9 cut(s) 124, 130, 273, 438, 906, 1689, 1822, 2150, 2259
SfcI CTRYAG 1 cut(s) 1335
Sfr274I CTCGAG 1 cut(s) 2375
SinI GGWCC 1 cut(s) 37
SlaI CTCGAG 1 cut(s) 2375
SmiMI CAYNNNNRTG 4 cut(s) 156, 998, 1940, 2146
SmlI CTYRAG 5 cut(s) 236, 1810, 1819, 2257, 2375
SmoI CTYRAG 5 cut(s) 236, 1810, 1819, 2257, 2375
SpeI ACTAGT 1 cut(s) 2120
SseBI AGGCCT 1 cut(s) 2027
SsiI CCGC 3 cut(s) 346, 451, 1194
SspI AATATT 2 cut(s) 858, 1165
SspMI CTAG 9 cut(s) 465, 597, 812, 1191, 1871, 2012, 2121, 2363, 2465
StuI AGGCCT 1 cut(s) 2027
StyD4I CCNGG 2 cut(s) 563, 2414
StyI CCWWGG 4 cut(s) 354, 1004, 1836, 2273
TaaI ACNGT 5 cut(s) 176, 974, 1205, 2314, 2333
TaiI ACGT 6 cut(s) 230, 262, 461, 1311, 1357, 1449
TaqI TCGA 6 cut(s) 222, 293, 898, 1381, 1654, 2376
TaqII GACCGA 1 cut(s) 54
TatI WGTACW 1 cut(s) 385
TauI GCSGC 1 cut(s) 454
TfiI GAWTC 6 cut(s) 642, 706, 788, 2359, 2583, 2602
TscAI CASTG 2 cut(s) 179, 1140
TseFI GTSAC 1 cut(s) 2520
TseI GCWGC 5 cut(s) 408, 1121, 1334, 2055, 2578
Tsp45I GTSAC 1 cut(s) 2520
TspDTI ATGAA 9 cut(s) 269, 284, 747, 752, 761, 1924, 2490, 2519, 2575
TspGWI ACGGA 3 cut(s) 224, 1925, 2060
TspRI CASTG 2 cut(s) 179, 1140
Vha464I CTTAAG 1 cut(s) 1810
VpaK11BI GGWCC 1 cut(s) 37
VspI ATTAAT 1 cut(s) 803
XapI RAATTY 6 cut(s) 1022, 1497, 2035, 2170, 2654, 2687
XbaI TCTAGA 2 cut(s) 2011, 2362
XceI RCATGY 1 cut(s) 1625
XcmI CCANNNNNNNNNTGG 1 cut(s) 1933
XhoI CTCGAG 1 cut(s) 2375
XmiI GTMKAC 1 cut(s) 2125
XspI CTAG 9 cut(s) 465, 597, 812, 1191, 1871, 2012, 2121, 2363, 2465
Zsp2I ATGCAT 1 cut(s) 1983
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.