Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001692.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

21646 .. 23510

Gene Structure 1865 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001692.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

atggctgaaggtgttgtcacagttgtggctgaagggatcaagcctctgggagacttcatcattcagcaagcgaagttcttgagcggagtcagctatcaagttgagcttgcacaagttgaacttcacttgatccgcggcttccttagagatgcagataaaagacaaggagaagaagaggtagtccgcatttgggttaaactgattagagatgctgcttatgacttggaggatgtcactgaatcttttgcattgaaagtggcttccaggaggagaggaggtactgtgaagattgcaaataaagaagaagaggtagtccgcatttgggttaaactgattaaagatgctgcttatgacttggaggatgtcactgaatcttttgccttgaaagtggcttccaggaggagaggaggtactgtgaagattgttctcaagagccaagaggaaaacacggatacgctggtcaaagagttgctaagagaaggaaagcgaaaattgcttagagttcttaagtttgaaaatatatacagagattttgacttgccaaagacgattgggagtctagtccacctgaggcttctaagtctgaaggatagtgcatttcgtgcgttgccatcatctgtatataatctggtacttttgcagactctagatcttcgtggttttgctttatttcctttttggtttggtcgggacagggtgaccaaaatcagaaatgtgttttggaatatggagcaactgaggcatttatatttacctgctgagcactctgtatgtggtaagaaactatcattagcaccgctgtgcaatttgcagacgttggtcaatgtttcaatcaagaattgtgatttgaatgatcttgttcaattaaccaatctgaagaaactatgcataactgaatcacagtctagtgacttgcaaaagttgaaggacatgttgatatcaagaagcatcacatttaaacatcttcggtcgctatctctgacggcaggccgacatgttaatgaggatataccaagagatatagttttaaggtgtcctcatttatgcaagctgcttttgagggggaaaatgacagagttaccgcaagagctcctggactatgcaaacctcaccaagataacattgattgaaacagatctgaatgttgaccagatagaaatagtagagaagctgcccaagttaagggtgctttacctcggttctcgttctttcgaatcagaaacaatggttttctcccaaggaggctttcctcatctggaatttcttacccttgaaagtttgggtaatttgaaggagtggagggtggagaaagaagccatgcctagtcttctgagattgcgcattgattggtgccgagaattgggggcagttccagatgggcttcaggagattactaccctcaaggaattaacaattaacgggatgcgcagtacattctgcagtagagtcgaggaaggaggagaggatttctacaaaatcaaacatgtgccttctcttataatcacaaatacctggggctag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

506

Amino Acids

57.87

Weight (kDa)

8.72

Isoelectric Point (pI)

45.71

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1499
Acc16I	TGCGCA	2 cut(s)	1340, 1427
Acc36I	ACCTGC	1 cut(s)	763
AccB1I	GGYRCC	1 cut(s)	1350
AccBSI	CCGCTC	1 cut(s)	84
AccII	CGCG	1 cut(s)	135
AciI	CCGC	7 cut(s)	84, 133, 135, 184, 316, 797, 1082
AclWI	GGATC	2 cut(s)	44, 124
AcsI	RAATTY	1 cut(s)	1259
AcuI	CTGAAG	5 cut(s)	27, 51, 605, 896, 1367
AfaI	GTAC	4 cut(s)	280, 412, 633, 1432
AfiI	CCNNNNNNNGG	4 cut(s)	190, 322, 1182, 1360
AflII	CTTAAG	1 cut(s)	506
AflIII	ACRYGT	3 cut(s)	930, 994, 1483
AjnI	CCWGG	4 cut(s)	263, 395, 1092, 1511
AjuI	GAANNNNNNNTTGG	4 cut(s)	703, 735, 1230, 1262
AleI	CACNNNNGTG	2 cut(s)	23, 799
AluBI	AGCT	5 cut(s)	93, 106, 1051, 1090, 1171
AluI	AGCT	5 cut(s)	93, 106, 1051, 1090, 1171
Alw21I	GWGCWC	2 cut(s)	765, 1092
Alw26I	GTCTC	1 cut(s)	45
AlwI	GGATC	2 cut(s)	44, 124
AoxI	GGCC	1 cut(s)	988
ApeKI	GCWGC	4 cut(s)	212, 344, 1051, 1171
ApoI	RAATTY	1 cut(s)	1259
AspLEI	GCGC	2 cut(s)	1341, 1428
AsuHPI	GGTGA	2 cut(s)	709, 1102
AsuII	TTCGAA	1 cut(s)	1212
AxyI	CCTNAGG	1 cut(s)	569
BaeI	ACNNNNGTAYC	2 cut(s)	444, 477
BanI	GGYRCC	1 cut(s)	1350
BanII	GRGCYC	1 cut(s)	1092
BbsI	GAAGAC	1 cut(s)	1319
Bbv12I	GWGCWC	2 cut(s)	765, 1092
BbvI	GCAGC	4 cut(s)	199, 331, 1038, 1158
BccI	CCATC	2 cut(s)	619, 1370
BceAI	ACGGC	1 cut(s)	999
BcgI	CGANNNNNNTGC	2 cut(s)	1429, 1463
BciT130I	CCWGG	4 cut(s)	265, 397, 1094, 1513
BciVI	GTATCC	1 cut(s)	445
BcoDI	GTCTC	1 cut(s)	45
BfaI	CTAG	5 cut(s)	560, 647, 906, 1323, 1519
BfmI	CTRYAG	1 cut(s)	1438
BfrI	CTTAAG	1 cut(s)	506
BfuAI	ACCTGC	1 cut(s)	763
BfuI	GTATCC	1 cut(s)	445
BglII	AGATCT	2 cut(s)	649, 1135
BisI	GCNGC	5 cut(s)	136, 213, 345, 1052, 1172
BlpI	GCTNAGC	1 cut(s)	759
BlsI	GCNGC	5 cut(s)	137, 214, 346, 1053, 1173
Bme1390I	CCNGG	4 cut(s)	265, 397, 1094, 1513
BmiI	GGNNCC	1 cut(s)	1352
BmrFI	CCNGG	4 cut(s)	265, 397, 1094, 1513
BmsI	GCATC	5 cut(s)	139, 199, 331, 957, 1413
BoxI	GACNNNNGTC	1 cut(s)	818
BpiI	GAAGAC	1 cut(s)	1319
Bpu1102I	GCTNAGC	1 cut(s)	759
Bpu14I	TTCGAA	1 cut(s)	1212
BpuEI	CTTGAG	3 cut(s)	100, 413, 1385
BsaJI	CCNNGG	4 cut(s)	133, 1195, 1237, 1512
BsaXI	ACNNNNNCTCC	8 cut(s)	262, 267, 292, 297, 394, 399, 424, 429
Bsc4I	CCNNNNNNNGG	4 cut(s)	190, 322, 1182, 1360
Bse21I	CCTNAGG	1 cut(s)	569
BseBI	CCWGG	4 cut(s)	265, 397, 1094, 1513
BseDI	CCNNGG	4 cut(s)	133, 1195, 1237, 1512
BseGI	GGATG	3 cut(s)	235, 367, 1428
BseLI	CCNNNNNNNGG	4 cut(s)	190, 322, 1182, 1360
BseMII	CTCAG	4 cut(s)	560, 728, 750, 1322
BseRI	GAGGAG	5 cut(s)	283, 288, 415, 420, 1473
BseXI	GCAGC	4 cut(s)	199, 331, 1038, 1158
Bsh1236I	CGCG	1 cut(s)	135
Bsh1285I	CGRYCG	1 cut(s)	971
BshFI	GGCC	1 cut(s)	990
BshNI	GGYRCC	1 cut(s)	1350
BsiEI	CGRYCG	1 cut(s)	971
BsiHKAI	GWGCWC	2 cut(s)	765, 1092
BslFI	GGGAC	1 cut(s)	704
BslI	CCNNNNNNNGG	4 cut(s)	190, 322, 1182, 1360
BsmAI	GTCTC	1 cut(s)	45
BsmFI	GGGAC	1 cut(s)	704
BsnI	GGCC	1 cut(s)	990
Bsp119I	TTCGAA	1 cut(s)	1212
Bsp1286I	GDGCHC	2 cut(s)	765, 1092
Bsp143I	GATC	5 cut(s)	36, 129, 649, 853, 1135
Bsp1720I	GCTNAGC	1 cut(s)	759
BspACI	CCGC	7 cut(s)	84, 133, 135, 184, 316, 797, 1082
BspANI	GGCC	1 cut(s)	990
BspCNI	CTCAG	4 cut(s)	561, 729, 751, 1323
BspFNI	CGCG	1 cut(s)	135
BspLI	GGNNCC	1 cut(s)	1352
BspMAI	CTGCAG	1 cut(s)	1442
BspMI	ACCTGC	1 cut(s)	763
BspPI	GGATC	2 cut(s)	44, 124
BspT104I	TTCGAA	1 cut(s)	1212
BspT107I	GGYRCC	1 cut(s)	1350
BspTI	CTTAAG	1 cut(s)	506
BsrBI	CCGCTC	1 cut(s)	84
BssECI	CCNNGG	4 cut(s)	133, 1195, 1237, 1512
BssMI	GATC	5 cut(s)	36, 129, 649, 853, 1135
BssT1I	CCWWGG	1 cut(s)	1237
Bst2UI	CCWGG	4 cut(s)	265, 397, 1094, 1513
Bst4CI	ACNGT	4 cut(s)	22, 283, 415, 903
Bst6I	CTCTTC	2 cut(s)	168, 300
BstAFI	CTTAAG	1 cut(s)	506
BstAPI	GCANNNNNTGC	1 cut(s)	602
BstBI	TTCGAA	1 cut(s)	1212
BstC8I	GCNNGC	4 cut(s)	69, 108, 988, 1049
BstDEI	CTNAG	8 cut(s)	143, 473, 497, 569, 578, 737, 759, 1331
BstDSI	CCRYGG	1 cut(s)	133
BstEII	GGTNACC	1 cut(s)	697
BstF5I	GGATG	3 cut(s)	235, 367, 1428
BstFNI	CGCG	1 cut(s)	135
BstHHI	GCGC	2 cut(s)	1341, 1428
BstKTI	GATC	5 cut(s)	39, 132, 652, 856, 1138
BstMAI	GTCTC	1 cut(s)	45
BstMBI	GATC	5 cut(s)	36, 129, 649, 853, 1135
BstMCI	CGRYCG	1 cut(s)	971
BstMWI	GCNNNNNNNGC	4 cut(s)	90, 493, 602, 739
BstNI	CCWGG	4 cut(s)	265, 397, 1094, 1513
BstNSI	RCATGY	3 cut(s)	934, 998, 1487
BstPAI	GACNNNNGTC	1 cut(s)	818
BstPI	GGTNACC	1 cut(s)	697
BstSCI	CCNGG	4 cut(s)	263, 395, 1092, 1511
BstSFI	CTRYAG	1 cut(s)	1438
BstUI	CGCG	1 cut(s)	135
BstV1I	GCAGC	4 cut(s)	199, 331, 1038, 1158
BstV2I	GAAGAC	1 cut(s)	1319
BstX2I	RGATCY	2 cut(s)	649, 1135
BstYI	RGATCY	2 cut(s)	649, 1135
Bsu36I	CCTNAGG	1 cut(s)	569
BsuI	GTATCC	1 cut(s)	445
BsuRI	GGCC	1 cut(s)	990
BtgI	CCRYGG	1 cut(s)	133
BtsCI	GGATG	3 cut(s)	235, 367, 1428
BtsIMutI	CAGTG	2 cut(s)	234, 366
BveI	ACCTGC	1 cut(s)	763
Cac8I	GCNNGC	4 cut(s)	69, 108, 988, 1049
CfoI	GCGC	2 cut(s)	1341, 1428
Cfr42I	CCGCGG	1 cut(s)	136
Csp6I	GTAC	4 cut(s)	279, 411, 632, 1431
CviAII	CATG	4 cut(s)	931, 995, 1318, 1484
CviQI	GTAC	4 cut(s)	279, 411, 632, 1431
DdeI	CTNAG	8 cut(s)	143, 473, 497, 569, 578, 737, 759, 1331
DpnI	GATC	5 cut(s)	38, 131, 651, 855, 1137
DpnII	GATC	5 cut(s)	36, 129, 649, 853, 1135
DraI	TTTAAA	1 cut(s)	958
Eam1104I	CTCTTC	2 cut(s)	168, 300
EarI	CTCTTC	2 cut(s)	168, 300
Ecl136II	GAGCTC	1 cut(s)	1090
Eco130I	CCWWGG	1 cut(s)	1237
Eco24I	GRGCYC	1 cut(s)	1092
Eco32I	GATATC	1 cut(s)	939
Eco53kI	GAGCTC	1 cut(s)	1090
Eco57I	CTGAAG	5 cut(s)	27, 51, 605, 896, 1367
Eco81I	CCTNAGG	1 cut(s)	569
Eco91I	GGTNACC	1 cut(s)	697
EcoICRI	GAGCTC	1 cut(s)	1090
EcoO65I	GGTNACC	1 cut(s)	697
EcoRII	CCWGG	4 cut(s)	263, 395, 1092, 1511
EcoRV	GATATC	1 cut(s)	939
EcoT14I	CCWWGG	1 cut(s)	1237
EcoT22I	ATGCAT	1 cut(s)	890
EcoT38I	GRGCYC	1 cut(s)	1092
ErhI	CCWWGG	1 cut(s)	1237
FaeI	CATG	4 cut(s)	934, 998, 1321, 1487
FalI	AAGNNNNNCTT	4 cut(s)	90, 122, 105, 137
FaqI	GGGAC	1 cut(s)	704
FatI	CATG	4 cut(s)	930, 994, 1317, 1483
Fnu4HI	GCNGC	5 cut(s)	136, 213, 345, 1052, 1172
FokI	GGATG	3 cut(s)	242, 374, 1435
FriOI	GRGCYC	1 cut(s)	1092
Fsp4HI	GCNGC	5 cut(s)	136, 213, 345, 1052, 1172
FspBI	CTAG	5 cut(s)	560, 647, 906, 1323, 1519
FspI	TGCGCA	2 cut(s)	1340, 1427
GlaI	GCGC	2 cut(s)	1340, 1427
GluI	GCNGC	5 cut(s)	136, 213, 345, 1052, 1172
HaeIII	GGCC	1 cut(s)	990
HhaI	GCGC	2 cut(s)	1341, 1428
Hin1II	CATG	4 cut(s)	934, 998, 1321, 1487
Hin6I	GCGC	2 cut(s)	1339, 1426
HinP1I	GCGC	2 cut(s)	1339, 1426
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HinfI	GANTC	8 cut(s)	87, 239, 371, 556, 643, 896, 1214, 1446
HphI	GGTGA	2 cut(s)	709, 1102
Hpy166II	GTNNAC	2 cut(s)	565, 1147
Hpy188I	TCNGA	7 cut(s)	585, 710, 876, 981, 1140, 1219, 1332
Hpy188III	TCNNGA	9 cut(s)	79, 430, 647, 689, 835, 942, 1256, 1373, 1385
Hpy8I	GTNNAC	2 cut(s)	565, 1147
HpyAV	CCTTC	7 cut(s)	26, 473, 580, 919, 1285, 1448, 1500
HpyCH4III	ACNGT	4 cut(s)	22, 283, 415, 903
HpyCH4IV	ACGT	1 cut(s)	815
HpyF10VI	GCNNNNNNNGC	4 cut(s)	90, 493, 602, 739
HpyF3I	CTNAG	8 cut(s)	143, 473, 497, 569, 578, 737, 759, 1331
HpySE526I	ACGT	1 cut(s)	815
Hsp92II	CATG	4 cut(s)	934, 998, 1321, 1487
HspAI	GCGC	2 cut(s)	1339, 1426
KspI	CCGCGG	1 cut(s)	136
Kzo9I	GATC	5 cut(s)	36, 129, 649, 853, 1135
LmnI	GCTCC	2 cut(s)	730, 1095
Lsp1109I	GCAGC	4 cut(s)	199, 331, 1038, 1158
LweI	GCATC	5 cut(s)	139, 199, 331, 957, 1413
MaeI	CTAG	5 cut(s)	560, 647, 906, 1323, 1519
MaeII	ACGT	1 cut(s)	815
MaeIII	GTNAC	6 cut(s)	16, 232, 364, 697, 908, 1077
MalI	GATC	5 cut(s)	38, 131, 651, 855, 1137
MbiI	CCGCTC	1 cut(s)	84
MboI	GATC	5 cut(s)	36, 129, 649, 853, 1135
MflI	RGATCY	2 cut(s)	649, 1135
MhlI	GDGCHC	2 cut(s)	765, 1092
MluCI	AATT	9 cut(s)	491, 805, 838, 863, 1259, 1285, 1358, 1406, 1413
MlyI	GAGTC	4 cut(s)	96, 565, 637, 1455
Mph1103I	ATGCAT	1 cut(s)	890
MslI	CAYNNNNRTG	3 cut(s)	23, 799, 999
MspA1I	CMGCKG	2 cut(s)	135, 799
MspCI	CTTAAG	1 cut(s)	506
MspR9I	CCNGG	4 cut(s)	265, 397, 1094, 1513
MvaI	CCWGG	4 cut(s)	265, 397, 1094, 1513
MvnI	CGCG	1 cut(s)	135
MwoI	GCNNNNNNNGC	4 cut(s)	90, 493, 602, 739
NdeII	GATC	5 cut(s)	36, 129, 649, 853, 1135
NlaIII	CATG	4 cut(s)	934, 998, 1321, 1487
NlaIV	GGNNCC	1 cut(s)	1352
NmeAIII	GCCGAG	1 cut(s)	1379
NmuCI	GTSAC	5 cut(s)	16, 232, 364, 697, 908
NsbI	TGCGCA	2 cut(s)	1340, 1427
NsiI	ATGCAT	1 cut(s)	890
NspI	RCATGY	3 cut(s)	934, 998, 1487
NspV	TTCGAA	1 cut(s)	1212
OliI	CACNNNNGTG	2 cut(s)	23, 799
PciI	ACATGT	3 cut(s)	930, 994, 1483
PfeI	GAWTC	4 cut(s)	239, 371, 896, 1214
PfoI	TCCNGGA	3 cut(s)	263, 395, 1092
PkrI	GCNGC	5 cut(s)	137, 214, 346, 1053, 1173
PleI	GAGTC	4 cut(s)	95, 564, 637, 1454
PpsI	GAGTC	4 cut(s)	95, 564, 637, 1454
PscI	ACATGT	3 cut(s)	930, 994, 1483
PshAI	GACNNNNGTC	1 cut(s)	818
PsiI	TTATAA	1 cut(s)	1499
Psp124BI	GAGCTC	1 cut(s)	1092
Psp6I	CCWGG	4 cut(s)	263, 395, 1092, 1511
PspEI	GGTNACC	1 cut(s)	697
PspGI	CCWGG	4 cut(s)	263, 395, 1092, 1511
PspN4I	GGNNCC	1 cut(s)	1352
PstI	CTGCAG	1 cut(s)	1442
PsuI	RGATCY	2 cut(s)	649, 1135
RsaI	GTAC	4 cut(s)	280, 412, 633, 1432
RsaNI	GTAC	4 cut(s)	279, 411, 632, 1431
RseI	CAYNNNNRTG	3 cut(s)	23, 799, 999
SacI	GAGCTC	1 cut(s)	1092
SacII	CCGCGG	1 cut(s)	136
SatI	GCNGC	5 cut(s)	136, 213, 345, 1052, 1172
Sau3AI	GATC	5 cut(s)	36, 129, 649, 853, 1135
SchI	GAGTC	4 cut(s)	96, 565, 637, 1455
ScrFI	CCNGG	4 cut(s)	265, 397, 1094, 1513
SduI	GDGCHC	2 cut(s)	765, 1092
SfaNI	GCATC	5 cut(s)	139, 199, 331, 957, 1413
SfcI	CTRYAG	1 cut(s)	1438
Sfr303I	CCGCGG	1 cut(s)	136
SfuI	TTCGAA	1 cut(s)	1212
SgrBI	CCGCGG	1 cut(s)	136
SmiMI	CAYNNNNRTG	3 cut(s)	23, 799, 999
SmlI	CTYRAG	4 cut(s)	79, 428, 506, 1400
SmoI	CTYRAG	4 cut(s)	79, 428, 506, 1400
Sse9I	AATT	9 cut(s)	491, 805, 838, 863, 1259, 1285, 1358, 1406, 1413
SsiI	CCGC	7 cut(s)	84, 133, 135, 184, 316, 797, 1082
SspMI	CTAG	5 cut(s)	560, 647, 906, 1323, 1519
SstI	GAGCTC	1 cut(s)	1092
StyD4I	CCNGG	4 cut(s)	263, 395, 1092, 1511
StyI	CCWWGG	1 cut(s)	1237
TaaI	ACNGT	4 cut(s)	22, 283, 415, 903
TaiI	ACGT	1 cut(s)	818
TaqI	TCGA	2 cut(s)	1212, 1449
TaqII	GACCGA	1 cut(s)	957
TasI	AATT	9 cut(s)	491, 805, 838, 863, 1259, 1285, 1358, 1406, 1413
TatI	WGTACW	1 cut(s)	1430
TauI	GCSGC	1 cut(s)	138
TfiI	GAWTC	4 cut(s)	239, 371, 896, 1214
TscAI	CASTG	2 cut(s)	241, 373
TseFI	GTSAC	5 cut(s)	16, 232, 364, 697, 908
TseI	GCWGC	4 cut(s)	212, 344, 1051, 1171
Tsp45I	GTSAC	5 cut(s)	16, 232, 364, 697, 908
TspDTI	ATGAA	1 cut(s)	46
TspGWI	ACGGA	1 cut(s)	464
TspRI	CASTG	2 cut(s)	241, 373
Vha464I	CTTAAG	1 cut(s)	506
XapI	RAATTY	1 cut(s)	1259
XbaI	TCTAGA	1 cut(s)	646
XceI	RCATGY	3 cut(s)	934, 998, 1487
XspI	CTAG	5 cut(s)	560, 647, 906, 1323, 1519
Zsp2I	ATGCAT	1 cut(s)	890

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.