Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002071.1

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Reverse (-)

24147 .. 27382

Gene Structure 3236 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002071.1_g000005.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2823 bp

atggctgaagctgtcgtttcaatggtgatccatgggctcaggccgctcggaagcttgatgattcagcaagcaatgttcttcaatggagtcggcgataaagttgagcttgcacaaaccgagctactcttgatgcaaggcttcctgaaagatgcagatgcacgacaagaaaatgaagaagtggtacgcttatgggttaatattattagagaagctgcttacgatttggaggatgccattgaatcttttgtcttgaaagtagctttcaagagggaagcaagtgtgaaggtagttctcaaaaggtttgcttgtttcttgtgcaaaggagtggatcgttacaagatcggattggaaattgagagcattacgaccaagctttctaagctcaggttgactatgcaaagctatgacataaagcaagagaaggggaatgaaggtgctacctcttcaatgaggcagcgagaacgcaggctaacctatcctcatgttattgagcaccacgttgttgggttaggggacgacacagagatgttagctacacatttggtggaagaaaaaggccctcaagtggtttctatttggggcatgggcggctcgggaaagaccacgcttgcaaaacaaatttacaatcataagaaagtcaagtctcattttgattgttttgcttgggtgtgtatatctcaacaatgtgacggtacaacagttatgaaagaaattttcattaaacttagcggagtgacgtccgatgagcagagaaaagaaattgcagatctgagtaatgatgaaatagcagagaggttgtacaatttccaacgacacagaaaatgtttggtggtgctggatgatatttggactcttgatgcatggaactcttttaaaggtggattttcagtggatgaggaaactgagagccgcatattattgaccactcgcaacagagaagtagcttcacttgcaaggggaaatagcttactctacgaatctcgggcgctaagtgcagatgaaagctggaatttatttcggaagatagcattcttcgaaatggatgatacaaattcagactctcaaatttattcaaagaaggaagaactgggaaagaatatgcttcaacattgtgcaggtttgccattagctattatcgtgctcgcaggactactagctagaaaagacacaattgatgagtgggagactgtgcataagaatgttaatgtatatataaggagaggcacagaccttgaacgagaatacaaaggtcaaaaacatggaggtgcttcatgggtcttggcactcagttatgacaacttaccatatcgcttaaagctatgctttttgtacttggcaaattttcctgaagattatgagatacgggtgaaaagactgactcagttatggatggcagaaggttttatatccacgacgtcaacagaaatgatggaagatgtatcatatagttgcttgagtgaattggtggaaaggtgtatggttcaagttgtggacattggcgtatctgggaaaattagaacttgtcgtcttcatgatcttatgcaagacttgtgcttgttaaaagccgaagaggagaactttttacatgttgtcaatttttatacagggacgagaaccaacacgacacgagtcggtagagttcgaagagtggcaatggttgatcaattagttccctctacaacaggtgctcccctgaggtcactcctcttatacttcggcccacaatacttccatcgaatctggagtaaaaaagtcatcgggtctgtattcaatgacttcaaattacttagagtcttgaagttggaacgtatggatgaactcaaagagttaccgagcacaattgggaatctggtccacttgcggtttttaagtctaaagaacagtggagttcgaaacttgccatcatctgtagctaacttggtgtgtttgcagactttagatttaggttctgatcgtgcttattataggaacatcccaaatgtgtttaagaagatggaacaattgaggcatttatatctaccgagctggtctaatcgcaaggtacgtggggggctctcattggctacagcttgcaacttgcagacgttagtcaatgttgaatgtggaaactgtgatttgaatgcccttgttgaattatacaatcttcggaaactatccatcaaggatgcgaaagggtcagaacactggaaaaaactggaggaattattgaaatcgagaagtagtcccacattccagcatcttcgttctctttctctgaatctgtggggtcatggttcattaacggatctatcggggtttcgttttatatacaagctgcggctgatggggtactcaatcaaggagttaccagagaacctgctgtcctttccaaacctcatcaagataaagctgtatgctactcgactgaagggggaccagatagaaatacttgagaagctgccacacttgagagtgctttacctcgaaaatggtgttttcgccagccttccttcaaacacactggttggcagcaatcgaggatttcccaatcttgaatttctttccctccgagggttgtcagaattgaaagagtggagggtggaggaaggagccatgcctcgtctccgcagattgtgcattaattggtgcgaattgagggcagttccagatgggcttcaatacgttgctaccctcaaggagttaacagtcaagtggatgccaagtgaattctgtactaggcttgggaaatacggggaggatttccacaaaatcaaacatgtaccttctcttatcataacagcaactgaattcagagactctgccgacaagaagtggcggaagtaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

940

Amino Acids

107.72

Weight (kDa)

8.85

Isoelectric Point (pI)

36.62

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	740, 1418
Acc36I	ACCTGC	2 cut(s)	1106, 2364
AccBSI	CCGCTC	1 cut(s)	46
AciI	CCGC	8 cut(s)	44, 588, 729, 910, 1861, 2317, 2605, 2815
AclWI	GGATC	3 cut(s)	22, 336, 2292
AcsI	RAATTY	9 cut(s)	618, 711, 1009, 1051, 1065, 1339, 2534, 2705, 2786
AcuI	CTGAAG	3 cut(s)	27, 1368, 2426
AcyI	GRCGYC	2 cut(s)	737, 1415
AfaI	GTAC	8 cut(s)	183, 694, 800, 1331, 2043, 2330, 2713, 2760
AfiI	CCNNNNNNNGG	2 cut(s)	565, 2550
AflIII	ACRYGT	2 cut(s)	1585, 2755
AloI	GAACNNNNNNTCC	2 cut(s)	2345, 2377
Alw21I	GWGCWC	4 cut(s)	495, 1143, 1690, 1838
Alw26I	GTCTC	4 cut(s)	648, 1178, 2606, 2787
AlwI	GGATC	3 cut(s)	22, 336, 2292
AlwNI	CAGNNNCTG	1 cut(s)	2783
Ama87I	CYCGRG	2 cut(s)	592, 981
AoxI	GGCC	3 cut(s)	41, 556, 1717
ApeKI	GCWGC	5 cut(s)	212, 454, 2314, 2437, 2508
ApoI	RAATTY	9 cut(s)	618, 711, 1009, 1051, 1065, 1339, 2534, 2705, 2786
AseI	ATTAAT	1 cut(s)	2619
AspLEI	GCGC	1 cut(s)	988
AspS9I	GGNCC	4 cut(s)	557, 1718, 1852, 2413
AsuHPI	GGTGA	2 cut(s)	37, 1378
AsuII	TTCGAA	3 cut(s)	1035, 1642, 1891
AvaI	CYCGRG	2 cut(s)	592, 981
AvaII	GGWCC	2 cut(s)	1852, 2413
AxyI	CCTNAGG	1 cut(s)	1694
BaeI	ACNNNNGTAYC	2 cut(s)	684, 717
BanII	GRGCYC	2 cut(s)	39, 2055
BarI	GAAGNNNNNNTAC	2 cut(s)	165, 197
BauI	CACGAG	1 cut(s)	1626
BbsI	GAAGAC	1 cut(s)	1520
Bbv12I	GWGCWC	4 cut(s)	495, 1143, 1690, 1838
BbvI	GCAGC	5 cut(s)	199, 466, 2301, 2424, 2520
BccI	CCATC	8 cut(s)	1384, 1423, 1740, 1909, 1987, 2165, 2317, 2642
BclI	TGATCA	1 cut(s)	1660
BcoDI	GTCTC	4 cut(s)	648, 1178, 2606, 2787
BfaI	CTAG	3 cut(s)	1154, 1158, 2715
BfmI	CTRYAG	2 cut(s)	1908, 2064
BfoI	RGCGCY	1 cut(s)	989
BfuAI	ACCTGC	2 cut(s)	1106, 2364
BglII	AGATCT	1 cut(s)	766
BisI	GCNGC	9 cut(s)	44, 213, 455, 589, 910, 2315, 2318, 2438, 2509
BlsI	GCNGC	9 cut(s)	45, 214, 456, 590, 911, 2316, 2319, 2439, 2510
Bme18I	GGWCC	2 cut(s)	1852, 2413
BmeT110I	CYCGRG	2 cut(s)	592, 981
BmgT120I	GGNCC	4 cut(s)	557, 1718, 1852, 2413
BmiI	GGNNCC	2 cut(s)	2414, 2590
BmrI	ACTGGG	1 cut(s)	1097
BmsI	GCATC	8 cut(s)	120, 139, 145, 220, 847, 2155, 2245, 2685
BmuI	ACTGGG	1 cut(s)	1097
BoxI	GACNNNNGTC	2 cut(s)	1628, 2087
BpiI	GAAGAC	1 cut(s)	1520
BpmI	CTGGAG	2 cut(s)	1762, 2216
Bpu10I	CCTNAGC	2 cut(s)	38, 383
Bpu14I	TTCGAA	3 cut(s)	1035, 1642, 1891
BpuEI	CTTGAG	5 cut(s)	546, 1474, 2450, 2467, 2657
BsaAI	YACGTR	1 cut(s)	2045
BsaHI	GRCGYC	2 cut(s)	737, 1415
BsaJI	CCNNGG	2 cut(s)	31, 2548
BsaXI	ACNNNNNCTCC	2 cut(s)	1672, 1702
Bsc4I	CCNNNNNNNGG	2 cut(s)	565, 2550
Bse1I	ACTGG	4 cut(s)	1092, 2189, 2199, 2505
Bse21I	CCTNAGG	1 cut(s)	1694
Bse3DI	GCAATG	2 cut(s)	78, 1659
BseDI	CCNNGG	2 cut(s)	31, 2548
BseGI	GGATG	9 cut(s)	235, 844, 898, 1048, 1395, 1819, 1971, 2170, 2700
BseLI	CCNNNNNNNGG	2 cut(s)	565, 2550
BseMI	GCAATG	2 cut(s)	78, 1659
BseMII	CTCAG	7 cut(s)	52, 397, 761, 894, 1300, 1394, 1685
BseNI	ACTGG	4 cut(s)	1092, 2189, 2199, 2505
BseRI	GAGGAG	2 cut(s)	1586, 1694
BseXI	GCAGC	5 cut(s)	199, 466, 2301, 2424, 2520
BsgI	GTGCAG	2 cut(s)	1014, 1134
BshFI	GGCC	3 cut(s)	43, 558, 1719
BsiHKAI	GWGCWC	4 cut(s)	495, 1143, 1690, 1838
BsiHKCI	CYCGRG	2 cut(s)	592, 981
BslFI	GGGAC	4 cut(s)	527, 1621, 2208, 2426
BslI	CCNNNNNNNGG	2 cut(s)	565, 2550
BsmAI	GTCTC	4 cut(s)	648, 1178, 2606, 2787
BsmBI	CGTCTC	1 cut(s)	2606
BsmFI	GGGAC	4 cut(s)	527, 1621, 2208, 2426
BsmI	GAATGC	2 cut(s)	1028, 2125
BsnI	GGCC	3 cut(s)	43, 558, 1719
BsoBI	CYCGRG	2 cut(s)	592, 981
Bsp119I	TTCGAA	3 cut(s)	1035, 1642, 1891
Bsp1286I	GDGCHC	6 cut(s)	39, 495, 1143, 1690, 1838, 2055
Bsp1407I	TGTACA	1 cut(s)	798
Bsp143I	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
Bsp19I	CCATGG	1 cut(s)	31
BspACI	CCGC	8 cut(s)	44, 588, 729, 910, 1861, 2317, 2605, 2815
BspANI	GGCC	3 cut(s)	43, 558, 1719
BspCNI	CTCAG	7 cut(s)	51, 396, 762, 895, 1299, 1393, 1686
BspHI	TCATGA	1 cut(s)	1531
BspLI	GGNNCC	2 cut(s)	2414, 2590
BspMI	ACCTGC	2 cut(s)	1106, 2364
BspPI	GGATC	3 cut(s)	22, 336, 2292
BspT104I	TTCGAA	3 cut(s)	1035, 1642, 1891
BsrBI	CCGCTC	1 cut(s)	46
BsrDI	GCAATG	2 cut(s)	78, 1659
BsrGI	TGTACA	1 cut(s)	798
BsrI	ACTGG	4 cut(s)	1092, 2189, 2199, 2505
BssECI	CCNNGG	2 cut(s)	31, 2548
BssMI	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
BssNI	GRCGYC	2 cut(s)	737, 1415
BssSI	CACGAG	1 cut(s)	1626
BssT1I	CCWWGG	1 cut(s)	31
Bst2BI	CACGAG	1 cut(s)	1626
Bst4CI	ACNGT	6 cut(s)	692, 700, 1189, 1883, 2111, 2686
Bst6I	CTCTTC	3 cut(s)	448, 1563, 1639
BstACI	GRCGYC	2 cut(s)	737, 1415
BstAPI	GCANNNNNTGC	1 cut(s)	2613
BstAUI	TGTACA	1 cut(s)	798
BstBAI	YACGTR	1 cut(s)	2045
BstBI	TTCGAA	3 cut(s)	1035, 1642, 1891
BstC8I	GCNNGC	7 cut(s)	69, 108, 467, 609, 1143, 2071, 2482
BstDSI	CCRYGG	1 cut(s)	31
BstF5I	GGATG	9 cut(s)	235, 844, 898, 1048, 1395, 1819, 1971, 2170, 2700
BstH2I	RGCGCY	1 cut(s)	989
BstHHI	GCGC	1 cut(s)	988
BstKTI	GATC	8 cut(s)	30, 331, 342, 769, 1537, 1663, 1954, 2287
BstMAI	GTCTC	4 cut(s)	648, 1178, 2606, 2787
BstMBI	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
BstMWI	GCNNNNNNNGC	6 cut(s)	43, 379, 588, 950, 992, 2613
BstNSI	RCATGY	2 cut(s)	1589, 2759
BstPAI	GACNNNNGTC	2 cut(s)	1628, 2087
BstSFI	CTRYAG	2 cut(s)	1908, 2064
BstV1I	GCAGC	5 cut(s)	199, 466, 2301, 2424, 2520
BstV2I	GAAGAC	1 cut(s)	1520
BstX2I	RGATCY	2 cut(s)	766, 2284
BstXI	CCANNNNNNTGG	1 cut(s)	503
BstYI	RGATCY	2 cut(s)	766, 2284
Bsu36I	CCTNAGG	1 cut(s)	1694
BsuRI	GGCC	3 cut(s)	43, 558, 1719
BtgI	CCRYGG	1 cut(s)	31
BtsCI	GGATG	9 cut(s)	235, 844, 898, 1048, 1395, 1819, 1971, 2170, 2700
BtsIMutI	CAGTG	4 cut(s)	894, 1888, 2182, 2498
BveI	ACCTGC	2 cut(s)	1106, 2364
Cac8I	GCNNGC	7 cut(s)	69, 108, 467, 609, 1143, 2071, 2482
CaiI	CAGNNNCTG	1 cut(s)	2783
CciI	TCATGA	1 cut(s)	1531
CfoI	GCGC	1 cut(s)	988
Cfr13I	GGNCC	4 cut(s)	557, 1718, 1852, 2413
Csp6I	GTAC	8 cut(s)	182, 693, 799, 1330, 2042, 2329, 2712, 2759
CspCI	CAANNNNNGTGG	2 cut(s)	2026, 2061
CviQI	GTAC	8 cut(s)	182, 693, 799, 1330, 2042, 2329, 2712, 2759
DpnI	GATC	8 cut(s)	29, 330, 341, 768, 1536, 1662, 1953, 2286
DpnII	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
DraI	TTTAAA	1 cut(s)	874
Eam1104I	CTCTTC	3 cut(s)	448, 1563, 1639
EarI	CTCTTC	3 cut(s)	448, 1563, 1639
Eco130I	CCWWGG	1 cut(s)	31
Eco24I	GRGCYC	2 cut(s)	39, 2055
Eco47I	GGWCC	2 cut(s)	1852, 2413
Eco57I	CTGAAG	3 cut(s)	27, 1368, 2426
Eco81I	CCTNAGG	1 cut(s)	1694
Eco88I	CYCGRG	2 cut(s)	592, 981
EcoO109I	RGGNCCY	1 cut(s)	557
EcoRI	GAATTC	2 cut(s)	2705, 2786
EcoT14I	CCWWGG	1 cut(s)	31
EcoT22I	ATGCAT	1 cut(s)	862
EcoT38I	GRGCYC	2 cut(s)	39, 2055
ErhI	CCWWGG	1 cut(s)	31
Esp3I	CGTCTC	1 cut(s)	2606
FalI	AAGNNNNNCTT	6 cut(s)	90, 122, 289, 321, 1307, 1339
FaqI	GGGAC	4 cut(s)	527, 1621, 2208, 2426
FbaI	TGATCA	1 cut(s)	1660
Fnu4HI	GCNGC	9 cut(s)	44, 213, 455, 589, 910, 2315, 2318, 2438, 2509
FokI	GGATG	9 cut(s)	242, 851, 905, 1055, 1402, 1826, 1958, 2177, 2707
FriOI	GRGCYC	2 cut(s)	39, 2055
Fsp4HI	GCNGC	9 cut(s)	44, 213, 455, 589, 910, 2315, 2318, 2438, 2509
FspBI	CTAG	3 cut(s)	1154, 1158, 2715
GlaI	GCGC	1 cut(s)	987
GluI	GCNGC	9 cut(s)	44, 213, 455, 589, 910, 2315, 2318, 2438, 2509
GsuI	CTGGAG	2 cut(s)	1762, 2216
HaeII	RGCGCY	1 cut(s)	989
HaeIII	GGCC	3 cut(s)	43, 558, 1719
HhaI	GCGC	1 cut(s)	988
Hin1I	GRCGYC	2 cut(s)	737, 1415
Hin6I	GCGC	1 cut(s)	986
HinP1I	GCGC	1 cut(s)	986
HincII	GTYRAC	3 cut(s)	390, 1419, 2682
HindII	GTYRAC	3 cut(s)	390, 1419, 2682
HindIII	AAGCTT	2 cut(s)	52, 371
HpaI	GTTAAC	1 cut(s)	2682
HphI	GGTGA	2 cut(s)	37, 1378
Hpy166II	GTNNAC	5 cut(s)	390, 1419, 1492, 1855, 2682
Hpy8I	GTNNAC	5 cut(s)	390, 1419, 1492, 1855, 2682
Hpy99I	CGWCG	1 cut(s)	1417
HpyCH4III	ACNGT	6 cut(s)	692, 700, 1189, 1883, 2111, 2686
HpyCH4IV	ACGT	7 cut(s)	498, 737, 1415, 1807, 2044, 2084, 2661
HpyF10VI	GCNNNNNNNGC	6 cut(s)	43, 379, 588, 950, 992, 2613
HpySE526I	ACGT	7 cut(s)	498, 737, 1415, 1807, 2044, 2084, 2661
Hsp92I	GRCGYC	2 cut(s)	737, 1415
HspAI	GCGC	1 cut(s)	986
Ksp22I	TGATCA	1 cut(s)	1660
KspAI	GTTAAC	1 cut(s)	2682
Kzo9I	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
LmnI	GCTCC	2 cut(s)	1693, 2588
Lsp1109I	GCAGC	5 cut(s)	199, 466, 2301, 2424, 2520
LweI	GCATC	8 cut(s)	120, 139, 145, 220, 847, 2155, 2245, 2685
MaeI	CTAG	3 cut(s)	1154, 1158, 2715
MaeII	ACGT	7 cut(s)	498, 737, 1415, 1807, 2044, 2084, 2661
MaeIII	GTNAC	6 cut(s)	332, 686, 733, 1698, 1827, 2343
MalI	GATC	8 cut(s)	29, 330, 341, 768, 1536, 1662, 1953, 2286
MbiI	CCGCTC	1 cut(s)	46
MboI	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
MfeI	CAATTG	3 cut(s)	1170, 1839, 2000
MflI	RGATCY	2 cut(s)	766, 2284
MhlI	GDGCHC	6 cut(s)	39, 495, 1143, 1690, 1838, 2055
MlyI	GAGTC	7 cut(s)	96, 844, 1052, 1372, 1638, 1800, 2789
MmeI	TCCRAC	2 cut(s)	832, 1782
Mph1103I	ATGCAT	1 cut(s)	862
MslI	CAYNNNNRTG	3 cut(s)	524, 1197, 1263
MunI	CAATTG	3 cut(s)	1170, 1839, 2000
Mva1269I	GAATGC	2 cut(s)	1028, 2125
MwoI	GCNNNNNNNGC	6 cut(s)	43, 379, 588, 950, 992, 2613
NcoI	CCATGG	1 cut(s)	31
NdeII	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
NlaIV	GGNNCC	2 cut(s)	2414, 2590
NmuCI	GTSAC	3 cut(s)	686, 733, 1698
NsiI	ATGCAT	1 cut(s)	862
NspI	RCATGY	2 cut(s)	1589, 2759
NspV	TTCGAA	3 cut(s)	1035, 1642, 1891
PagI	TCATGA	1 cut(s)	1531
PciI	ACATGT	2 cut(s)	1585, 2755
PcsI	WCGNNNNNNNCGW	1 cut(s)	2041
PctI	GAATGC	2 cut(s)	1028, 2125
PfeI	GAWTC	6 cut(s)	61, 239, 977, 1737, 1846, 2257
PkrI	GCNGC	9 cut(s)	45, 214, 456, 590, 911, 2316, 2319, 2439, 2510
PleI	GAGTC	7 cut(s)	95, 844, 1052, 1372, 1637, 1799, 2789
PpsI	GAGTC	7 cut(s)	95, 844, 1052, 1372, 1637, 1799, 2789
Ppu21I	YACGTR	1 cut(s)	2045
PscI	ACATGT	2 cut(s)	1585, 2755
PshAI	GACNNNNGTC	2 cut(s)	1628, 2087
PshBI	ATTAAT	1 cut(s)	2619
PspN4I	GGNNCC	2 cut(s)	2414, 2590
PspPI	GGNCC	4 cut(s)	557, 1718, 1852, 2413
PstNI	CAGNNNCTG	1 cut(s)	2783
PsuI	RGATCY	2 cut(s)	766, 2284
RsaI	GTAC	8 cut(s)	183, 694, 800, 1331, 2043, 2330, 2713, 2760
RsaNI	GTAC	8 cut(s)	182, 693, 799, 1330, 2042, 2329, 2712, 2759
RseI	CAYNNNNRTG	3 cut(s)	524, 1197, 1263
SatI	GCNGC	9 cut(s)	44, 213, 455, 589, 910, 2315, 2318, 2438, 2509
Sau3AI	GATC	8 cut(s)	27, 328, 339, 766, 1534, 1660, 1951, 2284
Sau96I	GGNCC	4 cut(s)	557, 1718, 1852, 2413
SchI	GAGTC	7 cut(s)	96, 844, 1052, 1372, 1638, 1800, 2789
SduI	GDGCHC	6 cut(s)	39, 495, 1143, 1690, 1838, 2055
SfaNI	GCATC	8 cut(s)	120, 139, 145, 220, 847, 2155, 2245, 2685
SfcI	CTRYAG	2 cut(s)	1908, 2064
SfuI	TTCGAA	3 cut(s)	1035, 1642, 1891
SinI	GGWCC	2 cut(s)	1852, 2413
SmiMI	CAYNNNNRTG	3 cut(s)	524, 1197, 1263
SmlI	CTYRAG	5 cut(s)	561, 1453, 2429, 2446, 2672
SmoI	CTYRAG	5 cut(s)	561, 1453, 2429, 2446, 2672
SsiI	CCGC	8 cut(s)	44, 588, 729, 910, 1861, 2317, 2605, 2815
SspI	AATATT	1 cut(s)	199
SspMI	CTAG	3 cut(s)	1154, 1158, 2715
StyI	CCWWGG	1 cut(s)	31
TaaI	ACNGT	6 cut(s)	692, 700, 1189, 1883, 2111, 2686
TaiI	ACGT	7 cut(s)	501, 740, 1418, 1810, 2047, 2087, 2664
TaqI	TCGA	8 cut(s)	1035, 1642, 1735, 1891, 2213, 2401, 2463, 2515
TatI	WGTACW	3 cut(s)	798, 1329, 2711
TauI	GCSGC	4 cut(s)	46, 591, 912, 2320
TfiI	GAWTC	6 cut(s)	61, 239, 977, 1737, 1846, 2257
TscAI	CASTG	4 cut(s)	894, 1888, 2189, 2505
TseFI	GTSAC	3 cut(s)	686, 733, 1698
TseI	GCWGC	5 cut(s)	212, 454, 2314, 2437, 2508
Tsp45I	GTSAC	3 cut(s)	686, 733, 1698
TspGWI	ACGGA	1 cut(s)	2297
TspRI	CASTG	4 cut(s)	894, 1888, 2189, 2505
VpaK11BI	GGWCC	2 cut(s)	1852, 2413
VspI	ATTAAT	1 cut(s)	2619
XapI	RAATTY	9 cut(s)	618, 711, 1009, 1051, 1065, 1339, 2534, 2705, 2786
XceI	RCATGY	2 cut(s)	1589, 2759
XspI	CTAG	3 cut(s)	1154, 1158, 2715
ZraI	GACGTC	2 cut(s)	738, 1416
Zsp2I	ATGCAT	1 cut(s)	862

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.