RchiOBHm_Chr1g0345391

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Forward (+)
37753229 .. 37755271
2043 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ57172

Sequence Viewer

Length: 2043 bp
ATGCATGTTGTAAATGTTATAAATTATATGCAAGAACAGCAATATTATATGTTCAAGCATATGATGACATTCTATCTACACAAAAGTAAATATGACAATCAGTTTTCAGTAATGACTAAATCTCTCTTACTGAAGTACTGCTTCTTTTCTTGTTCAGACTTGGAAATTTATGCAAAGAAGAGAGAATTAGGAAAGAAGATGCTTGTACATTGTTCAGGTTTACCATTAGCCATCAATGTGCTCGCTGGTCTTCTTAGTAGACGAGAGACGATTGATGAGTGGGATGCAGTACTTCTTAATGTTGATGTATACATAATGAGAGGCATAAATGTCCTTGAAAGAGAAAAGACAGGTCAGGAGTGTGGTGTTTCAGGTGTCTTGGCATTGAGTTATGATGACTTACCATCTCACTTAAAACTATGCTTTTTGTATTTAGCCCAATTTCCTGAGGATCATGAGATACGGGTAAAAAGACTTACTCAATTATGGATTGCAGAAGGATTTATAACTTCAACGTCAGAAATGCATGTTTCAGGGGAAATTTTGGAAGAATTGTCATATAGTTGCCTAGTTGAATTGGTGGAAAGATCTATGGTTCAAGTTGTAGAATATGGTTTAAGTGGGAAGGTGAAAACTTGCGGTCTCCATGATTTTATGCGAGACTTGTGCTTGCAAAAGGCAGAAGAGGAGAATTTTATCCGAATTATTAACTGTTCTACGGGACTGGTATCTAAGACACCACTAATTGGCAAGGTTCGAAGACTTGCCCTCCATTTGGACGAAAATGTTAAATATGATTTCAGTATAGATGGAAGAGATGAGCACATTAGGTCTCTATTATACTTTACCCCAAAAGGGTTTGACCAAAAGTGGAACAAAAAAGTAATGCGATCAGTATTCAATGACTTCAAATTGCTTAGAGTTCTGAAGTTTGAAAAAATAGAGAGAGAATTTCAGTTACCGAAAACGATTGGGAATCTAGTCCACTTGAGGTTTCTGAGTCTGAAACATAGTGCATATAGTGGGTTGCCATCATCTGTTTCTAATCTGGTACTTTTGCAAACTCTAGATCTGCGGTATAATTATTATTTATATGAAGGATCTTGTTTTGGTCGGGAGAGGGCAACCAGAATCAGAAATGTGTTTTGGAATATGGAGCAACTGAGGCATTTATATTTACCTTGGCGTCACTATATAAGTGAACAGAAACTCTCATTTGCAAGGCTGTGCAATTTGCAGACGTTGGGTGATCTTCCAATTGAGAAATGTGAGTTAAATGATCTTGTTCAGTTAAGCAATCTAAAGAAAATATCCATAATCGTATCACAGCCTAGTCACTTGGAAAAGTTCAAGAACATGTTGATATCAAGAAGTATAACATATGAGCATCTTGGATCGCTATCTTTGAAGCTAAACCGAGATGATAATGAGGATATAGCAAGAGATATAGTGTTAAGGTGTCCTTATTTATACAAACTACGACTGCTTGGGAAAATGACGGAGTTTCCAGAAGAGCTCCTGGGCTATCCAAAACTCACCAAGATAACGCTGGTTAGTACAGAACTGAGATGTGACCAGATAGATATAGTGAAGATGCTGCCCAAGTTAAGGGTGCTTTACCTGGGTCGTGATGCTTTCAAATCAAAAACAATGGTTTTCTCCCCAGGAGGCTTTCCTCATCTGGAATTTCTTACACTAAGTGCTTTGTTTATGTTGAACGAGTGGAGGGTGGAGAAAGAAGCCATGCCTAGTCTTCAGAGATTGCATATTGAATGGTGCTTACAATTGTGGGAAGTACCAGATGGGCTTCAGCATATTACTACCCTCAAGGAATTAACAATCAATGTGATGACCAGTAGATTCTGCAGTAGGGTTGGGGAAGAAGGAGAGGATTTCTACAAAATTAAACATGTGCCTTCTATTATAATCACAAATATTCAACCGGACTACAAGAAAGACAAGGAGCCAGAAATGGAGGAAGCAGCAGGTGCGTCTCGAGTAGTTGCTAATGACTATGAGGAATCAACTGTGGATGGTATGTGA

Protein Analysis

680

Amino Acids

79.22

Weight (kDa)

7.54

Isoelectric Point (pI)

46.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
WHD_DRP PF23559 148 - 223 4.7e-17 Disease resistance protein Winged helix domain
LRR_14 PF23598 293 - 624 2.4e-33 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 20, 506, 1925
AarI CACCTGC 1 cut(s) 1976
Acc36I ACCTGC 1 cut(s) 1976
AccB7I CCANNNNNTGG 1 cut(s) 746
AccI GTMKAC 2 cut(s) 259, 309
AciI CCGC 2 cut(s) 639, 1075
AclWI GGATC 3 cut(s) 459, 1108, 1402
AcsI RAATTY 5 cut(s) 165, 540, 691, 950, 1685
AcuI CTGAAG 4 cut(s) 152, 947, 1739, 1793
AcyI GRCGYC 1 cut(s) 1186
AdeI CACNNNGTG 1 cut(s) 1700
AfaI GTAC 6 cut(s) 137, 207, 291, 1053, 1558, 1797
AfiI CCNNNNNNNGG 4 cut(s) 746, 775, 855, 1608
AflIII ACRYGT 2 cut(s) 1356, 1909
AjnI CCWGG 3 cut(s) 1518, 1620, 1663
AjuI GAANNNNNNNTTGG 2 cut(s) 1129, 1161
AluBI AGCT 2 cut(s) 1411, 1516
AluI AGCT 2 cut(s) 1411, 1516
Alw21I GWGCWC 3 cut(s) 243, 825, 1518
Alw26I GTCTC 5 cut(s) 260, 647, 654, 837, 1998
AlwI GGATC 3 cut(s) 459, 1108, 1402
Ama87I CYCGRG 1 cut(s) 1995
ApeKI GCWGC 2 cut(s) 1597, 1982
ApoI RAATTY 5 cut(s) 165, 540, 691, 950, 1685
AsuHPI GGTGA 3 cut(s) 640, 1259, 1528
AsuII TTCGAA 1 cut(s) 757
AvaI CYCGRG 1 cut(s) 1995
AxyI CCTNAGG 1 cut(s) 447
BanII GRGCYC 1 cut(s) 1518
BbsI GAAGAC 3 cut(s) 242, 766, 1745
Bbv12I GWGCWC 3 cut(s) 243, 825, 1518
BbvI GCAGC 2 cut(s) 1584, 1994
BccI CCATC 6 cut(s) 239, 412, 803, 1039, 1796, 2027
BcgI CGANNNNNNTGC 2 cut(s) 648, 682
BciT130I CCWGG 3 cut(s) 1520, 1622, 1665
BcoDI GTCTC 5 cut(s) 260, 647, 654, 837, 1998
BfaI CTAG 5 cut(s) 569, 980, 1067, 1332, 1749
BfmI CTRYAG 1 cut(s) 1864
BfuAI ACCTGC 1 cut(s) 1976
BglII AGATCT 2 cut(s) 587, 1069
BisI GCNGC 2 cut(s) 1598, 1983
BlsI GCNGC 2 cut(s) 1599, 1984
BmcAI AGTACT 2 cut(s) 137, 291
Bme1390I CCNGG 3 cut(s) 1520, 1622, 1665
BmeT110I CYCGRG 1 cut(s) 1995
BmiI GGNNCC 1 cut(s) 1965
BmrFI CCNGG 3 cut(s) 1520, 1622, 1665
BmsI GCATC 5 cut(s) 189, 274, 1396, 1584, 1621
BpiI GAAGAC 3 cut(s) 242, 766, 1745
Bpu14I TTCGAA 1 cut(s) 757
BpuEI CTTGAG 2 cut(s) 1009, 1811
BsaBI GATNNNNATC 1 cut(s) 1399
BsaHI GRCGYC 1 cut(s) 1186
BsaI GGTCTC 2 cut(s) 647, 837
BsaJI CCNNGG 4 cut(s) 1181, 1519, 1621, 1663
BsaWI WCCGGW 1 cut(s) 1942
BsaXI ACNNNNNCTCC 2 cut(s) 753, 783
Bsc4I CCNNNNNNNGG 4 cut(s) 746, 775, 855, 1608
Bse1I ACTGG 2 cut(s) 729, 1854
Bse21I CCTNAGG 1 cut(s) 447
Bse8I GATNNNNATC 1 cut(s) 1399
BseBI CCWGG 3 cut(s) 1520, 1622, 1665
BseDI CCNNGG 4 cut(s) 1181, 1519, 1621, 1663
BseGI GGATG 2 cut(s) 289, 2038
BseJI GATNNNNATC 1 cut(s) 1399
BseLI CCNNNNNNNGG 4 cut(s) 746, 775, 855, 1608
BseMII CTCAG 4 cut(s) 438, 989, 1154, 1556
BseNI ACTGG 2 cut(s) 729, 1854
BseRI GAGGAG 1 cut(s) 701
BseXI GCAGC 2 cut(s) 1584, 1994
BsiHKAI GWGCWC 3 cut(s) 243, 825, 1518
BsiHKCI CYCGRG 1 cut(s) 1995
BsiSI CCGG 1 cut(s) 1943
BslFI GGGAC 1 cut(s) 735
BslI CCNNNNNNNGG 4 cut(s) 746, 775, 855, 1608
BsmAI GTCTC 5 cut(s) 260, 647, 654, 837, 1998
BsmBI CGTCTC 2 cut(s) 260, 1998
BsmFI GGGAC 1 cut(s) 735
Bso31I GGTCTC 2 cut(s) 647, 837
BsoBI CYCGRG 1 cut(s) 1995
Bsp119I TTCGAA 1 cut(s) 757
Bsp1286I GDGCHC 3 cut(s) 243, 825, 1518
Bsp1407I TGTACA 1 cut(s) 205
Bsp143I GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
BspACI CCGC 2 cut(s) 639, 1075
BspCNI CTCAG 4 cut(s) 439, 990, 1155, 1557
BspHI TCATGA 1 cut(s) 454
BspLI GGNNCC 1 cut(s) 1965
BspMAI CTGCAG 1 cut(s) 1868
BspMI ACCTGC 1 cut(s) 1976
BspPI GGATC 3 cut(s) 459, 1108, 1402
BspQI GCTCTTC 1 cut(s) 1506
BspT104I TTCGAA 1 cut(s) 757
BspTNI GGTCTC 2 cut(s) 647, 837
BsrGI TGTACA 1 cut(s) 205
BsrI ACTGG 2 cut(s) 729, 1854
BssECI CCNNGG 4 cut(s) 1181, 1519, 1621, 1663
BssMI GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
BssNAI GTATAC 1 cut(s) 310
BssNI GRCGYC 1 cut(s) 1186
BssT1I CCWWGG 1 cut(s) 1181
Bst1107I GTATAC 1 cut(s) 310
Bst2UI CCWGG 3 cut(s) 1520, 1622, 1665
Bst4CI ACNGT 2 cut(s) 713, 2029
Bst6I CTCTTC 4 cut(s) 173, 678, 808, 1506
BstACI GRCGYC 1 cut(s) 1186
BstAPI GCANNNNNTGC 1 cut(s) 1988
BstAUI TGTACA 1 cut(s) 205
BstBI TTCGAA 1 cut(s) 757
BstC8I GCNNGC 2 cut(s) 243, 671
BstDEI CTNAG 8 cut(s) 254, 447, 732, 917, 998, 1163, 1565, 1697
BstF5I GGATG 2 cut(s) 289, 2038
BstKTI GATC 8 cut(s) 454, 590, 893, 1072, 1103, 1252, 1282, 1397
BstMAI GTCTC 5 cut(s) 260, 647, 654, 837, 1998
BstMBI GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
BstMWI GCNNNNNNNGC 3 cut(s) 37, 1165, 1988
BstNI CCWGG 3 cut(s) 1520, 1622, 1665
BstNSI RCATGY 4 cut(s) 8, 530, 1360, 1913
BstSCI CCNGG 3 cut(s) 1518, 1620, 1663
BstSFI CTRYAG 1 cut(s) 1864
BstV1I GCAGC 2 cut(s) 1584, 1994
BstV2I GAAGAC 3 cut(s) 242, 766, 1745
BstX2I RGATCY 3 cut(s) 587, 1069, 1100
BstYI RGATCY 3 cut(s) 587, 1069, 1100
BstZ17I GTATAC 1 cut(s) 310
Bsu36I CCTNAGG 1 cut(s) 447
BtsCI GGATG 2 cut(s) 289, 2038
BveI ACCTGC 1 cut(s) 1976
Cac8I GCNNGC 2 cut(s) 243, 671
CciI TCATGA 1 cut(s) 454
CseI GACGC 2 cut(s) 1175, 1980
Csp6I GTAC 6 cut(s) 136, 206, 290, 1052, 1557, 1796
CviAII CATG 7 cut(s) 5, 455, 527, 647, 1357, 1744, 1910
CviQI GTAC 6 cut(s) 136, 206, 290, 1052, 1557, 1796
DdeI CTNAG 8 cut(s) 254, 447, 732, 917, 998, 1163, 1565, 1697
DpnI GATC 8 cut(s) 453, 589, 892, 1071, 1102, 1251, 1281, 1396
DpnII GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
DraIII CACNNNGTG 1 cut(s) 1700
Eam1104I CTCTTC 4 cut(s) 173, 678, 808, 1506
EarI CTCTTC 4 cut(s) 173, 678, 808, 1506
Ecl136II GAGCTC 1 cut(s) 1516
Eco130I CCWWGG 1 cut(s) 1181
Eco24I GRGCYC 1 cut(s) 1518
Eco31I GGTCTC 2 cut(s) 647, 837
Eco32I GATATC 1 cut(s) 1365
Eco53kI GAGCTC 1 cut(s) 1516
Eco57I CTGAAG 4 cut(s) 152, 947, 1739, 1793
Eco81I CCTNAGG 1 cut(s) 447
Eco88I CYCGRG 1 cut(s) 1995
EcoICRI GAGCTC 1 cut(s) 1516
EcoRII CCWGG 3 cut(s) 1518, 1620, 1663
EcoRV GATATC 1 cut(s) 1365
EcoT14I CCWWGG 1 cut(s) 1181
EcoT22I ATGCAT 2 cut(s) 6, 528
EcoT38I GRGCYC 1 cut(s) 1518
ErhI CCWWGG 1 cut(s) 1181
Esp3I CGTCTC 2 cut(s) 260, 1998
FaeI CATG 7 cut(s) 8, 458, 530, 650, 1360, 1747, 1913
FalI AAGNNNNNCTT 4 cut(s) 125, 157, 1447, 1479
FaqI GGGAC 1 cut(s) 735
FatI CATG 7 cut(s) 4, 454, 526, 646, 1356, 1743, 1909
FauNDI CATATG 2 cut(s) 60, 1381
FblI GTMKAC 2 cut(s) 259, 309
Fnu4HI GCNGC 2 cut(s) 1598, 1983
FokI GGATG 1 cut(s) 296
FriOI GRGCYC 1 cut(s) 1518
Fsp4HI GCNGC 2 cut(s) 1598, 1983
FspBI CTAG 5 cut(s) 569, 980, 1067, 1332, 1749
GluI GCNGC 2 cut(s) 1598, 1983
HapII CCGG 1 cut(s) 1943
HgaI GACGC 2 cut(s) 1175, 1980
Hin1I GRCGYC 1 cut(s) 1186
Hin1II CATG 7 cut(s) 8, 458, 530, 650, 1360, 1747, 1913
HinfI GANTC 5 cut(s) 976, 1000, 1131, 1860, 2021
HpaII CCGG 1 cut(s) 1943
HphI GGTGA 3 cut(s) 640, 1259, 1528
Hpy166II GTNNAC 5 cut(s) 221, 260, 310, 985, 1202
Hpy188I TCNGA 8 cut(s) 157, 520, 701, 927, 999, 1005, 1136, 1758
Hpy8I GTNNAC 5 cut(s) 221, 260, 310, 985, 1202
HpyAV CCTTC 5 cut(s) 491, 619, 1091, 1877, 1926
HpyCH4III ACNGT 2 cut(s) 713, 2029
HpyCH4IV ACGT 2 cut(s) 515, 1241
HpyF10VI GCNNNNNNNGC 3 cut(s) 37, 1165, 1988
HpyF3I CTNAG 8 cut(s) 254, 447, 732, 917, 998, 1163, 1565, 1697
HpySE526I ACGT 2 cut(s) 515, 1241
Hsp92I GRCGYC 1 cut(s) 1186
Hsp92II CATG 7 cut(s) 8, 458, 530, 650, 1360, 1747, 1913
Kzo9I GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
LguI GCTCTTC 1 cut(s) 1506
LmnI GCTCC 3 cut(s) 1156, 1521, 1963
Lsp1109I GCAGC 2 cut(s) 1584, 1994
LweI GCATC 5 cut(s) 189, 274, 1396, 1584, 1621
MaeI CTAG 5 cut(s) 569, 980, 1067, 1332, 1749
MaeII ACGT 2 cut(s) 515, 1241
MaeIII GTNAC 4 cut(s) 957, 1187, 1334, 1571
MalI GATC 8 cut(s) 453, 589, 892, 1071, 1102, 1251, 1281, 1396
MboI GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
MfeI CAATTG 2 cut(s) 1257, 1784
MflI RGATCY 3 cut(s) 587, 1069, 1100
MhlI GDGCHC 3 cut(s) 243, 825, 1518
MlyI GAGTC 1 cut(s) 1009
Mph1103I ATGCAT 2 cut(s) 6, 528
MslI CAYNNNNRTG 1 cut(s) 236
MspI CCGG 1 cut(s) 1943
MspR9I CCNGG 3 cut(s) 1520, 1622, 1665
MunI CAATTG 2 cut(s) 1257, 1784
MvaI CCWGG 3 cut(s) 1520, 1622, 1665
MwoI GCNNNNNNNGC 3 cut(s) 37, 1165, 1988
NdeI CATATG 2 cut(s) 60, 1381
NdeII GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
NlaIII CATG 7 cut(s) 8, 458, 530, 650, 1360, 1747, 1913
NlaIV GGNNCC 1 cut(s) 1965
NmuCI GTSAC 3 cut(s) 1187, 1334, 1571
NsiI ATGCAT 2 cut(s) 6, 528
NspI RCATGY 4 cut(s) 8, 530, 1360, 1913
NspV TTCGAA 1 cut(s) 757
PaeR7I CTCGAG 1 cut(s) 1995
PagI TCATGA 1 cut(s) 454
PaqCI CACCTGC 1 cut(s) 1976
PciI ACATGT 2 cut(s) 1356, 1909
PciSI GCTCTTC 1 cut(s) 1506
PfeI GAWTC 4 cut(s) 976, 1131, 1860, 2021
PflMI CCANNNNNTGG 1 cut(s) 746
PkrI GCNGC 2 cut(s) 1599, 1984
PleI GAGTC 1 cut(s) 1008
PpsI GAGTC 1 cut(s) 1008
PscI ACATGT 2 cut(s) 1356, 1909
PsiI TTATAA 3 cut(s) 20, 506, 1925
Psp124BI GAGCTC 1 cut(s) 1518
Psp6I CCWGG 3 cut(s) 1518, 1620, 1663
PspGI CCWGG 3 cut(s) 1518, 1620, 1663
PspN4I GGNNCC 1 cut(s) 1965
PstI CTGCAG 1 cut(s) 1868
PsuI RGATCY 3 cut(s) 587, 1069, 1100
RsaI GTAC 6 cut(s) 137, 207, 291, 1053, 1558, 1797
RsaNI GTAC 6 cut(s) 136, 206, 290, 1052, 1557, 1796
RseI CAYNNNNRTG 1 cut(s) 236
SacI GAGCTC 1 cut(s) 1518
SapI GCTCTTC 1 cut(s) 1506
SatI GCNGC 2 cut(s) 1598, 1983
Sau3AI GATC 8 cut(s) 451, 587, 890, 1069, 1100, 1249, 1279, 1394
ScaI AGTACT 2 cut(s) 137, 291
SchI GAGTC 1 cut(s) 1009
ScrFI CCNGG 3 cut(s) 1520, 1622, 1665
SduI GDGCHC 3 cut(s) 243, 825, 1518
SfaNI GCATC 5 cut(s) 189, 274, 1396, 1584, 1621
SfcI CTRYAG 1 cut(s) 1864
Sfr274I CTCGAG 1 cut(s) 1995
SfuI TTCGAA 1 cut(s) 757
SlaI CTCGAG 1 cut(s) 1995
SmiMI CAYNNNNRTG 1 cut(s) 236
SmlI CTYRAG 3 cut(s) 988, 1826, 1995
SmoI CTYRAG 3 cut(s) 988, 1826, 1995
SsiI CCGC 2 cut(s) 639, 1075
SspI AATATT 2 cut(s) 44, 1936
SspMI CTAG 5 cut(s) 569, 980, 1067, 1332, 1749
SstI GAGCTC 1 cut(s) 1518
StyD4I CCNGG 3 cut(s) 1518, 1620, 1663
StyI CCWWGG 1 cut(s) 1181
TaaI ACNGT 2 cut(s) 713, 2029
TaiI ACGT 2 cut(s) 518, 1244
TaqI TCGA 2 cut(s) 757, 1996
TatI WGTACW 4 cut(s) 135, 205, 289, 1556
TfiI GAWTC 4 cut(s) 976, 1131, 1860, 2021
TseFI GTSAC 3 cut(s) 1187, 1334, 1571
TseI GCWGC 2 cut(s) 1597, 1982
Tsp45I GTSAC 3 cut(s) 1187, 1334, 1571
TspDTI ATGAA 1 cut(s) 1110
TspGWI ACGGA 1 cut(s) 1514
Van91I CCANNNNNTGG 1 cut(s) 746
XapI RAATTY 5 cut(s) 165, 540, 691, 950, 1685
XbaI TCTAGA 1 cut(s) 1066
XceI RCATGY 4 cut(s) 8, 530, 1360, 1913
XcmI CCANNNNNNNNNTGG 1 cut(s) 1546
XhoI CTCGAG 1 cut(s) 1995
XmiI GTMKAC 2 cut(s) 259, 309
XspI CTAG 5 cut(s) 569, 980, 1067, 1332, 1749
ZrmI AGTACT 2 cut(s) 137, 291
Zsp2I ATGCAT 2 cut(s) 6, 528
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.