disease resistance
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 387, 2750 |
| AarI | CACCTGC | 1 cut(s) | 1434 |
| Acc36I | ACCTGC | 1 cut(s) | 1434 |
| AccB1I | GGYRCC | 1 cut(s) | 1894 |
| AccII | CGCG | 1 cut(s) | 2310 |
| AccIII | TCCGGA | 2 cut(s) | 55, 1318 |
| AciI | CCGC | 5 cut(s) | 11, 570, 932, 1892, 2310 |
| AclI | AACGTT | 1 cut(s) | 233 |
| AclWI | GGATC | 1 cut(s) | 765 |
| AcoI | YGGCCR | 1 cut(s) | 3 |
| AcuI | CTGAAG | 1 cut(s) | 770 |
| AcyI | GRCGYC | 1 cut(s) | 222 |
| AdeI | CACNNNGTG | 1 cut(s) | 2375 |
| AfaI | GTAC | 3 cut(s) | 1345, 1813, 2259 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 403, 676, 1318, 2608, 2667, 2698 |
| AflII | CTTAAG | 2 cut(s) | 1426, 1855 |
| AflIII | ACRYGT | 2 cut(s) | 1980, 2731 |
| AgeI | ACCGGT | 1 cut(s) | 1336 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1207 |
| AjnI | CCWGG | 2 cut(s) | 644, 1828 |
| Alw21I | GWGCWC | 1 cut(s) | 1854 |
| Alw26I | GTCTC | 4 cut(s) | 1194, 1512, 1999, 2579 |
| Alw44I | GTGCAC | 1 cut(s) | 1850 |
| AlwI | GGATC | 1 cut(s) | 765 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1933, 2621 |
| Ama87I | CYCGRG | 1 cut(s) | 543 |
| Aor13HI | TCCGGA | 2 cut(s) | 55, 1318 |
| AoxI | GGCC | 3 cut(s) | 3, 538, 2033 |
| ApaLI | GTGCAC | 1 cut(s) | 1850 |
| ApeKI | GCWGC | 3 cut(s) | 1388, 2299, 2422 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 33, 65, 222, 254, 2231, 2263 |
| AsiGI | ACCGGT | 1 cut(s) | 1336 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 693 |
| AspS9I | GGNCC | 3 cut(s) | 539, 1209, 2033 |
| AsuC2I | CCSGG | 1 cut(s) | 2775 |
| AsuHPI | GGTGA | 5 cut(s) | 103, 428, 1351, 1844, 2754 |
| AsuII | TTCGAA | 2 cut(s) | 954, 1615 |
| AvaI | CYCGRG | 1 cut(s) | 543 |
| AvaII | GGWCC | 1 cut(s) | 1209 |
| AxyI | CCTNAGG | 1 cut(s) | 2348 |
| BaeGI | GKGCMC | 1 cut(s) | 1854 |
| BanI | GGYRCC | 1 cut(s) | 1894 |
| BanII | GRGCYC | 1 cut(s) | 2631 |
| BbsI | GAAGAC | 2 cut(s) | 1624, 2340 |
| Bbv12I | GWGCWC | 1 cut(s) | 1854 |
| BbvI | GCAGC | 3 cut(s) | 1400, 2286, 2409 |
| BccI | CCATC | 8 cut(s) | 233, 559, 1112, 1357, 1906, 1987, 2618, 2669 |
| BceAI | ACGGC | 1 cut(s) | 816 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 623, 657, 1506, 1540 |
| BciT130I | CCWGG | 2 cut(s) | 646, 1830 |
| BcnI | CCSGG | 1 cut(s) | 2775 |
| BcoDI | GTCTC | 4 cut(s) | 1194, 1512, 1999, 2579 |
| BfmI | CTRYAG | 3 cut(s) | 1905, 2578, 2686 |
| BfrI | CTTAAG | 2 cut(s) | 1426, 1855 |
| BfuAI | ACCTGC | 1 cut(s) | 1434 |
| BisI | GCNGC | 3 cut(s) | 1389, 2300, 2423 |
| BlsI | GCNGC | 3 cut(s) | 1390, 2301, 2424 |
| BmcAI | AGTACT | 1 cut(s) | 1813 |
| Bme1390I | CCNGG | 3 cut(s) | 646, 1830, 2775 |
| Bme18I | GGWCC | 1 cut(s) | 1209 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1207 |
| BmeT110I | CYCGRG | 1 cut(s) | 543 |
| BmgT120I | GGNCC | 3 cut(s) | 539, 1209, 2033 |
| BmiI | GGNNCC | 8 cut(s) | 541, 830, 1210, 1896, 2034, 2354, 2563, 2630 |
| BmrFI | CCNGG | 3 cut(s) | 646, 1830, 2775 |
| BpiI | GAAGAC | 2 cut(s) | 1624, 2340 |
| BpmI | CTGGAG | 1 cut(s) | 1836 |
| Bpu14I | TTCGAA | 2 cut(s) | 954, 1615 |
| BpuEI | CTTGAG | 3 cut(s) | 2375, 2452, 2633 |
| BpuMI | CCSGG | 1 cut(s) | 2775 |
| BsaAI | YACGTR | 1 cut(s) | 1943 |
| BsaHI | GRCGYC | 1 cut(s) | 222 |
| BsaI | GGTCTC | 1 cut(s) | 1194 |
| BsaJI | CCNNGG | 5 cut(s) | 6, 645, 670, 1204, 2261 |
| BsaWI | WCCGGW | 3 cut(s) | 55, 1318, 1336 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 403, 676, 1318, 2608, 2667, 2698 |
| Bse118I | RCCGGY | 2 cut(s) | 1336, 2691 |
| Bse1I | ACTGG | 4 cut(s) | 292, 499, 1742, 1819 |
| Bse21I | CCTNAGG | 1 cut(s) | 2348 |
| Bse3DI | GCAATG | 4 cut(s) | 131, 1014, 1081, 1778 |
| BseAI | TCCGGA | 2 cut(s) | 55, 1318 |
| BseBI | CCWGG | 2 cut(s) | 646, 1830 |
| BseDI | CCNNGG | 5 cut(s) | 6, 645, 670, 1204, 2261 |
| BseGI | GGATG | 4 cut(s) | 570, 1368, 1626, 2676 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 403, 676, 1318, 2608, 2667, 2698 |
| BseMI | GCAATG | 4 cut(s) | 131, 1014, 1081, 1778 |
| BseMII | CTCAG | 5 cut(s) | 342, 873, 2055, 2363, 2496 |
| BseNI | ACTGG | 4 cut(s) | 292, 499, 1742, 1819 |
| BseRI | GAGGAG | 1 cut(s) | 2721 |
| BseSI | GKGCMC | 1 cut(s) | 1854 |
| BseXI | GCAGC | 3 cut(s) | 1400, 2286, 2409 |
| BseYI | CCCAGC | 1 cut(s) | 108 |
| BsgI | GTGCAG | 1 cut(s) | 2756 |
| Bsh1236I | CGCG | 1 cut(s) | 2310 |
| BshFI | GGCC | 3 cut(s) | 5, 540, 2035 |
| BshNI | GGYRCC | 1 cut(s) | 1894 |
| BshTI | ACCGGT | 1 cut(s) | 1336 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1854 |
| BsiHKCI | CYCGRG | 1 cut(s) | 543 |
| BsiSI | CCGG | 5 cut(s) | 56, 1319, 1337, 2692, 2774 |
| BslFI | GGGAC | 3 cut(s) | 1694, 1784, 2212 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 403, 676, 1318, 2608, 2667, 2698 |
| BsmAI | GTCTC | 4 cut(s) | 1194, 1512, 1999, 2579 |
| BsmFI | GGGAC | 3 cut(s) | 1694, 1784, 2212 |
| BsmI | GAATGC | 2 cut(s) | 268, 2442 |
| BsnI | GGCC | 3 cut(s) | 5, 540, 2035 |
| Bso31I | GGTCTC | 1 cut(s) | 1194 |
| BsoBI | CYCGRG | 1 cut(s) | 543 |
| Bsp119I | TTCGAA | 2 cut(s) | 954, 1615 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1854, 2631 |
| Bsp13I | TCCGGA | 2 cut(s) | 55, 1318 |
| Bsp143I | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| Bsp19I | CCATGG | 1 cut(s) | 2261 |
| BspACI | CCGC | 5 cut(s) | 11, 570, 932, 1892, 2310 |
| BspANI | GGCC | 3 cut(s) | 5, 540, 2035 |
| BspCNI | CTCAG | 5 cut(s) | 341, 874, 2056, 2364, 2495 |
| BspEI | TCCGGA | 2 cut(s) | 55, 1318 |
| BspFNI | CGCG | 1 cut(s) | 2310 |
| BspLI | GGNNCC | 8 cut(s) | 541, 830, 1210, 1896, 2034, 2354, 2563, 2630 |
| BspMAI | CTGCAG | 1 cut(s) | 2582 |
| BspMI | ACCTGC | 1 cut(s) | 1434 |
| BspPI | GGATC | 1 cut(s) | 765 |
| BspT104I | TTCGAA | 2 cut(s) | 954, 1615 |
| BspT107I | GGYRCC | 1 cut(s) | 1894 |
| BspTI | CTTAAG | 2 cut(s) | 1426, 1855 |
| BspTNI | GGTCTC | 1 cut(s) | 1194 |
| BsrDI | GCAATG | 4 cut(s) | 131, 1014, 1081, 1778 |
| BsrFI | RCCGGY | 2 cut(s) | 1336, 2691 |
| BsrI | ACTGG | 4 cut(s) | 292, 499, 1742, 1819 |
| BssAI | RCCGGY | 2 cut(s) | 1336, 2691 |
| BssECI | CCNNGG | 5 cut(s) | 6, 645, 670, 1204, 2261 |
| BssMI | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| BssNI | GRCGYC | 1 cut(s) | 222 |
| BssT1I | CCWWGG | 3 cut(s) | 670, 1204, 2261 |
| Bst2UI | CCWGG | 2 cut(s) | 646, 1830 |
| Bst6I | CTCTTC | 1 cut(s) | 956 |
| BstACI | GRCGYC | 1 cut(s) | 222 |
| BstAFI | CTTAAG | 2 cut(s) | 1426, 1855 |
| BstBAI | YACGTR | 1 cut(s) | 1943 |
| BstBI | TTCGAA | 2 cut(s) | 954, 1615 |
| BstC8I | GCNNGC | 3 cut(s) | 99, 1116, 2693 |
| BstDEI | CTNAG | 9 cut(s) | 328, 882, 1306, 1784, 2064, 2147, 2348, 2372, 2482 |
| BstDSI | CCRYGG | 1 cut(s) | 2261 |
| BstF5I | GGATG | 4 cut(s) | 570, 1368, 1626, 2676 |
| BstFNI | CGCG | 1 cut(s) | 2310 |
| BstKTI | GATC | 6 cut(s) | 88, 214, 760, 1510, 1590, 2119 |
| BstMAI | GTCTC | 4 cut(s) | 1194, 1512, 1999, 2579 |
| BstMBI | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 34, 929, 1889, 2066 |
| BstNI | CCWGG | 2 cut(s) | 646, 1830 |
| BstNSI | RCATGY | 1 cut(s) | 2735 |
| BstSCI | CCNGG | 3 cut(s) | 644, 1828, 2773 |
| BstSFI | CTRYAG | 3 cut(s) | 1905, 2578, 2686 |
| BstSLI | GKGCMC | 1 cut(s) | 1854 |
| BstSNI | TACGTA | 1 cut(s) | 1943 |
| BstUI | CGCG | 1 cut(s) | 2310 |
| BstV1I | GCAGC | 3 cut(s) | 1400, 2286, 2409 |
| BstV2I | GAAGAC | 2 cut(s) | 1624, 2340 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2348 |
| BsuRI | GGCC | 3 cut(s) | 5, 540, 2035 |
| BtgI | CCRYGG | 1 cut(s) | 2261 |
| BtsCI | GGATG | 4 cut(s) | 570, 1368, 1626, 2676 |
| BtsI | GCAGTG | 2 cut(s) | 1398, 2076 |
| BtsIMutI | CAGTG | 3 cut(s) | 1398, 2076, 2369 |
| BveI | ACCTGC | 1 cut(s) | 1434 |
| Cac8I | GCNNGC | 3 cut(s) | 99, 1116, 2693 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1933, 2621 |
| Cfr10I | RCCGGY | 2 cut(s) | 1336, 2691 |
| Cfr13I | GGNCC | 3 cut(s) | 539, 1209, 2033 |
| CseI | GACGC | 1 cut(s) | 230 |
| CsiI | ACCWGGT | 1 cut(s) | 1828 |
| Csp6I | GTAC | 3 cut(s) | 1344, 1812, 2258 |
| CspAI | ACCGGT | 1 cut(s) | 1336 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 948, 983 |
| CviAII | CATG | 8 cut(s) | 479, 611, 1245, 1469, 1505, 2262, 2566, 2732 |
| CviQI | GTAC | 3 cut(s) | 1344, 1812, 2258 |
| DdeI | CTNAG | 9 cut(s) | 328, 882, 1306, 1784, 2064, 2147, 2348, 2372, 2482 |
| DpnI | GATC | 6 cut(s) | 87, 213, 759, 1509, 1589, 2118 |
| DpnII | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| DraI | TTTAAA | 2 cut(s) | 1533, 1794 |
| DraIII | CACNNNGTG | 1 cut(s) | 2375 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1207 |
| EaeI | YGGCCR | 1 cut(s) | 3 |
| Eam1104I | CTCTTC | 1 cut(s) | 956 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1207 |
| EarI | CTCTTC | 1 cut(s) | 956 |
| Eco105I | TACGTA | 1 cut(s) | 1943 |
| Eco130I | CCWWGG | 3 cut(s) | 670, 1204, 2261 |
| Eco24I | GRGCYC | 1 cut(s) | 2631 |
| Eco31I | GGTCTC | 1 cut(s) | 1194 |
| Eco47I | GGWCC | 1 cut(s) | 1209 |
| Eco57I | CTGAAG | 1 cut(s) | 770 |
| Eco81I | CCTNAGG | 1 cut(s) | 2348 |
| Eco88I | CYCGRG | 1 cut(s) | 543 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2033 |
| EcoRI | GAATTC | 2 cut(s) | 367, 2681 |
| EcoRII | CCWGG | 2 cut(s) | 644, 1828 |
| EcoT14I | CCWWGG | 3 cut(s) | 670, 1204, 2261 |
| EcoT22I | ATGCAT | 1 cut(s) | 1529 |
| EcoT38I | GRGCYC | 1 cut(s) | 2631 |
| ErhI | CCWWGG | 3 cut(s) | 670, 1204, 2261 |
| FaeI | CATG | 8 cut(s) | 482, 614, 1248, 1472, 1508, 2265, 2569, 2735 |
| FaqI | GGGAC | 3 cut(s) | 1694, 1784, 2212 |
| FatI | CATG | 8 cut(s) | 478, 610, 1244, 1468, 1504, 2261, 2565, 2731 |
| FauI | CCCGC | 1 cut(s) | 563 |
| Fnu4HI | GCNGC | 3 cut(s) | 1389, 2300, 2423 |
| FokI | GGATG | 4 cut(s) | 577, 1375, 1613, 2683 |
| FriOI | GRGCYC | 1 cut(s) | 2631 |
| Fsp4HI | GCNGC | 3 cut(s) | 1389, 2300, 2423 |
| GluI | GCNGC | 3 cut(s) | 1389, 2300, 2423 |
| GsaI | CCCAGC | 1 cut(s) | 112 |
| GsuI | CTGGAG | 1 cut(s) | 1836 |
| HaeIII | GGCC | 3 cut(s) | 5, 540, 2035 |
| HapII | CCGG | 5 cut(s) | 56, 1319, 1337, 2692, 2774 |
| HgaI | GACGC | 1 cut(s) | 230 |
| Hin1I | GRCGYC | 1 cut(s) | 222 |
| Hin1II | CATG | 8 cut(s) | 482, 614, 1248, 1472, 1508, 2265, 2569, 2735 |
| HincII | GTYRAC | 1 cut(s) | 492 |
| HindII | GTYRAC | 1 cut(s) | 492 |
| HindIII | AAGCTT | 4 cut(s) | 95, 1796, 2363, 2428 |
| HinfI | GANTC | 5 cut(s) | 146, 886, 1843, 1930, 2240 |
| HpaI | GTTAAC | 1 cut(s) | 492 |
| HpaII | CCGG | 5 cut(s) | 56, 1319, 1337, 2692, 2774 |
| HphI | GGTGA | 5 cut(s) | 103, 428, 1351, 1844, 2754 |
| Hpy166II | GTNNAC | 4 cut(s) | 285, 492, 1852, 2239 |
| Hpy8I | GTNNAC | 4 cut(s) | 285, 492, 1852, 2239 |
| Hpy99I | CGWCG | 1 cut(s) | 224 |
| HpyAV | CCTTC | 6 cut(s) | 748, 1220, 1229, 1364, 2542, 2696 |
| HpyCH4IV | ACGT | 3 cut(s) | 233, 1942, 1980 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 34, 929, 1889, 2066 |
| HpyF3I | CTNAG | 9 cut(s) | 328, 882, 1306, 1784, 2064, 2147, 2348, 2372, 2482 |
| HpySE526I | ACGT | 3 cut(s) | 233, 1942, 1980 |
| Hsp92I | GRCGYC | 1 cut(s) | 222 |
| Hsp92II | CATG | 8 cut(s) | 482, 614, 1248, 1472, 1508, 2265, 2569, 2735 |
| Kpn2I | TCCGGA | 2 cut(s) | 55, 1318 |
| KroI | GCCGGC | 1 cut(s) | 2691 |
| KroNI | GCCGGC | 1 cut(s) | 2693 |
| KspAI | GTTAAC | 1 cut(s) | 492 |
| Kzo9I | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| LmnI | GCTCC | 3 cut(s) | 828, 2561, 2634 |
| Lsp1109I | GCAGC | 3 cut(s) | 1400, 2286, 2409 |
| MabI | ACCWGGT | 1 cut(s) | 1828 |
| MaeII | ACGT | 3 cut(s) | 233, 1942, 1980 |
| MaeIII | GTNAC | 3 cut(s) | 1262, 1758, 2325 |
| MalI | GATC | 6 cut(s) | 87, 213, 759, 1509, 1589, 2118 |
| MboI | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| MfeI | CAATTG | 2 cut(s) | 116, 1143 |
| MhlI | GDGCHC | 2 cut(s) | 1854, 2631 |
| MlyI | GAGTC | 3 cut(s) | 895, 1924, 2234 |
| MmeI | TCCRAC | 4 cut(s) | 831, 1441, 2511, 2752 |
| Mph1103I | ATGCAT | 1 cut(s) | 1529 |
| MroI | TCCGGA | 2 cut(s) | 55, 1318 |
| MroNI | GCCGGC | 1 cut(s) | 2691 |
| MroXI | GAANNNNTTC | 1 cut(s) | 693 |
| MslI | CAYNNNNRTG | 5 cut(s) | 182, 1109, 1170, 1420, 1503 |
| MspCI | CTTAAG | 2 cut(s) | 1426, 1855 |
| MspI | CCGG | 5 cut(s) | 56, 1319, 1337, 2692, 2774 |
| MspR9I | CCNGG | 3 cut(s) | 646, 1830, 2775 |
| MunI | CAATTG | 2 cut(s) | 116, 1143 |
| Mva1269I | GAATGC | 2 cut(s) | 268, 2442 |
| MvaI | CCWGG | 2 cut(s) | 646, 1830 |
| MvnI | CGCG | 1 cut(s) | 2310 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 34, 929, 1889, 2066 |
| NaeI | GCCGGC | 1 cut(s) | 2693 |
| NciI | CCSGG | 1 cut(s) | 2775 |
| NcoI | CCATGG | 1 cut(s) | 2261 |
| NdeII | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| NgoMIV | GCCGGC | 1 cut(s) | 2691 |
| NlaIII | CATG | 8 cut(s) | 482, 614, 1248, 1472, 1508, 2265, 2569, 2735 |
| NlaIV | GGNNCC | 8 cut(s) | 541, 830, 1210, 1896, 2034, 2354, 2563, 2630 |
| NmeAIII | GCCGAG | 1 cut(s) | 31 |
| NmuCI | GTSAC | 1 cut(s) | 1758 |
| NsiI | ATGCAT | 1 cut(s) | 1529 |
| NspI | RCATGY | 1 cut(s) | 2735 |
| NspV | TTCGAA | 2 cut(s) | 954, 1615 |
| PaqCI | CACCTGC | 1 cut(s) | 1434 |
| PciI | ACATGT | 1 cut(s) | 2731 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 225 |
| PctI | GAATGC | 2 cut(s) | 268, 2442 |
| PdiI | GCCGGC | 1 cut(s) | 2693 |
| PdmI | GAANNNNTTC | 1 cut(s) | 693 |
| PfeI | GAWTC | 2 cut(s) | 146, 1843 |
| PflFI | GACNNNGTC | 1 cut(s) | 47 |
| PfoI | TCCNGGA | 1 cut(s) | 2773 |
| PinAI | ACCGGT | 1 cut(s) | 1336 |
| PkrI | GCNGC | 3 cut(s) | 1390, 2301, 2424 |
| PleI | GAGTC | 3 cut(s) | 894, 1924, 2234 |
| PpsI | GAGTC | 3 cut(s) | 894, 1924, 2234 |
| Ppu21I | YACGTR | 1 cut(s) | 1943 |
| PscI | ACATGT | 1 cut(s) | 2731 |
| PsiI | TTATAA | 2 cut(s) | 387, 2750 |
| Psp1406I | AACGTT | 1 cut(s) | 233 |
| Psp6I | CCWGG | 2 cut(s) | 644, 1828 |
| PspFI | CCCAGC | 1 cut(s) | 108 |
| PspGI | CCWGG | 2 cut(s) | 644, 1828 |
| PspN4I | GGNNCC | 8 cut(s) | 541, 830, 1210, 1896, 2034, 2354, 2563, 2630 |
| PspPI | GGNCC | 3 cut(s) | 539, 1209, 2033 |
| PstI | CTGCAG | 1 cut(s) | 2582 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1933, 2621 |
| PsyI | GACNNNGTC | 1 cut(s) | 47 |
| RsaI | GTAC | 3 cut(s) | 1345, 1813, 2259 |
| RsaNI | GTAC | 3 cut(s) | 1344, 1812, 2258 |
| RseI | CAYNNNNRTG | 5 cut(s) | 182, 1109, 1170, 1420, 1503 |
| SatI | GCNGC | 3 cut(s) | 1389, 2300, 2423 |
| Sau3AI | GATC | 6 cut(s) | 85, 211, 757, 1507, 1587, 2116 |
| Sau96I | GGNCC | 3 cut(s) | 539, 1209, 2033 |
| ScaI | AGTACT | 1 cut(s) | 1813 |
| SchI | GAGTC | 3 cut(s) | 895, 1924, 2234 |
| ScrFI | CCNGG | 3 cut(s) | 646, 1830, 2775 |
| SduI | GDGCHC | 2 cut(s) | 1854, 2631 |
| SexAI | ACCWGGT | 1 cut(s) | 1828 |
| SfcI | CTRYAG | 3 cut(s) | 1905, 2578, 2686 |
| SfuI | TTCGAA | 2 cut(s) | 954, 1615 |
| SinI | GGWCC | 1 cut(s) | 1209 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 182, 1109, 1170, 1420, 1503 |
| SmlI | CTYRAG | 5 cut(s) | 1426, 1855, 2390, 2431, 2648 |
| SmoI | CTYRAG | 5 cut(s) | 1426, 1855, 2390, 2431, 2648 |
| SnaBI | TACGTA | 1 cut(s) | 1943 |
| SsiI | CCGC | 5 cut(s) | 11, 570, 932, 1892, 2310 |
| SspI | AATATT | 3 cut(s) | 193, 2095, 2758 |
| StyD4I | CCNGG | 3 cut(s) | 644, 1828, 2773 |
| StyI | CCWWGG | 3 cut(s) | 670, 1204, 2261 |
| TaiI | ACGT | 3 cut(s) | 236, 1945, 1983 |
| TaqI | TCGA | 8 cut(s) | 228, 371, 471, 633, 889, 954, 1475, 1615 |
| TatI | WGTACW | 2 cut(s) | 1343, 1811 |
| TfiI | GAWTC | 2 cut(s) | 146, 1843 |
| TscAI | CASTG | 3 cut(s) | 1398, 2076, 2376 |
| TseFI | GTSAC | 1 cut(s) | 1758 |
| TseI | GCWGC | 3 cut(s) | 1388, 2299, 2422 |
| Tsp45I | GTSAC | 1 cut(s) | 1758 |
| TspGWI | ACGGA | 4 cut(s) | 460, 1034, 1082, 2190 |
| TspRI | CASTG | 3 cut(s) | 1398, 2076, 2376 |
| Tth111I | GACNNNGTC | 1 cut(s) | 47 |
| Vha464I | CTTAAG | 2 cut(s) | 1426, 1855 |
| VneI | GTGCAC | 1 cut(s) | 1850 |
| VpaK11BI | GGWCC | 1 cut(s) | 1209 |
| XbaI | TCTAGA | 1 cut(s) | 2119 |
| XceI | RCATGY | 1 cut(s) | 2735 |
| XmnI | GAANNNNTTC | 1 cut(s) | 693 |
| ZrmI | AGTACT | 1 cut(s) | 1813 |
| Zsp2I | ATGCAT | 1 cut(s) | 1529 |