Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0000069

Physical Location & Seq

Genomic Coordinates Forward (+)

23143014 .. 23150467

Gene Structure 7454 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G217900.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2808 bp

ATGACTGAAGCAATAGTTTCCTTTGTGATTGAAAGACTTGGAGAATTCATCATCCAAGATGCAAAGTTCTTGTTTGGAGTCAGCGATAAAGTTGAGTTTGCACAAACTGAGCTGCAACTCATGCAGGGTTTTCTGAAAGATGCAGATCTAAGGCAACGAGATGATGAAACGGTACGTGTTTGGGTTGCACAAATAAGAAAGGCTGCTTATGATCTGGAGGATGTCATAGAAATATTTATCTTGAGAGTGGCTACAAAGAAGCGAGGCATGAAGCATGTTCTGAAAAGGTTTGGTTGTGTGTTAAAGGAAGGAGTTGATCTTCACAAGATTGGGTCACAAATTGAGAATGTTACCACCCAACTTTCTAATTTGAGGTCAAGCTTGCAAACTTATAACATTAAGGAAATAAGGAACTCTAGAGGTGCCACTTCTTTGTATGAGAGGCAGCAGCAAGTAAGGCGAACTTATTCTCATATTATTGAACGTGATGTTGTTGGGTTAGAGAATAGTGCGGAAGAATTGGTCAAGCATTTGGTGAAGAAAGAATTTAGCCACCGAATTGTTTCTATCTGGGGTATGGGTGGTCTGGGAAAGACCACCCTTGCAAAACAAATTTATCGTCATAATGAAGTTAGACGCCATTTTGGTTGCTTTGTTTGGATATGTATATCTCAACAATTCCAAGTGAGATCTGTTTGGGAAGAAATTTTAATTAAACTTATTTCTGCTACCACTGCGCAAAGAGAAGAATTTGCAAAACTGAGGGATGATGAAATAGCCAAGAAGATATATCTTCTACAACAAAAAAGTAGATGTTTGGTAGTCCTTGACGATATTTGGAGCATTGAGGCATGGGAGTCACTGAAAGCTGCGTTTCCATTGTATGATGCGGAAACAGAAAGTAGAATATTACTCACCACTCGCAACAAAGAGGTAGCTTTACATTCAAATGGATTCATCCACCAACCTCGCCCATTAAATGACGATGAAAGCTGGGAACTTTTTGAGAAGATAGCAATCTTTGGAAGAGAAGGAATAACCTTCGAAGTTTCCACAAAGATGAAAAAGTTAGGAAAGAAAATGCTTCAACATTGTGTCGGCTTGCCATTAGCCATCATTGTGCTCGCAGGACTACTCGCCAGAAAGGACACAATTAATGAGTGGGAGACAGTACTTAAGAATGTTTATGCATACATAAGAAGAGGCAAAGACCATGAACATGAAGTCACGGGTACATCGTGGGTGTTGTCGTTGAGTTATGATAACTTACCGTATTATTTAAAACCATGTTTTTTATATTTAGGTCATTTCCCTGAAGATTTTGAGATATCAGTAAAGAGGTTGACTCAGTTATGGATGGCAGAAGGTCTTATATCCTTGGTGCAACAAAGACAAGGTTCAATGGAAACAATGGAGGAGATAGCTTTTAGTTCCTTAAATGAATTAGTGGAAAGGTGTATGGTTCAAATTGGAGAACGGGGTTCAATTAGAAAGATTAAATCTTGTCGGCTTCATGATCTCATGCGAGACTTGTGCTTGTTGAAGGCAGAAGAGGAGAACTTTCTCCAAACTGTCAATTTGTCGCATAGGGAGACAATGTATGCTCTTCCTTCTCCCACGGCAATCGAGGCAACACTAAAAGGTAAGGTTCGAAGACTTGCCATCTATGTGGATGATAATGTTGATAAATTGGTTCCATCAAGTTATGAAAGAGATGACCGCCTTAGATCTCTGTTATACTTTGGCCCAAGATACTGGATGCCAAACAATAACAAGTTAGTGTCGCCAATATTCAAGGACTTCAAATTGCTTAGAGTTTTGAAGGTTGAAGGTATAAAGCTATTAGTAAAATTGCCTAATGAAATTGGGAATATGGTCCACTTGAGATTTTTAAGTCTAAGGCATAGTTTTATAAATTGGTTGCCATCGTCCTTAGGTAATTTGATATGTATGCAAACTCTGGATTTACGCATCAACGGAACGAATGTAGTTCCAGATGTATTTTGGATGATGGAACAACTGAGGCATTTGTATTTACCTTTTTATTACACCGCACGGGGTAAAAAACTTCGACTGTCCACTCTTCATGATTTGCAGACTCTACATCATGTTTCAAGCCTCTGTTGTGACTTGAACGATCTTACTCAGTTAACCAGTCTTAGAACACTGGCCATACAAGTGACAAGCCCTTTGAAAAATTTGGAGGAAACCTTAGAATCTACAAGCAGCACACTTGATCGCATTCAATCTCTGTATGTGCACAACTTACTTGGAATTCGTAGTGGTACGGAGGTTGCACAGATAGTGTTAAGTTGCCGTCATATATACAAGCTAGATTTGAATGGGCGAACAGTACAGTTACCTGACCTTCAACACTTTCCGAACCTCACTAAGTTAACACTGTGTCGCTGTGATCTCAAGGCCAACCAGATGGCTGTGCTAGAGAAGCAGCCAAATCTTAAAACTCTTTGCCTTATGGAGGAAACTTTTGAGGATGGATTAGACACACTGGTTTTCTCCAAAGGAAGCTTTCTTCAACTTGAATCTCTTTCCCTCATTTGCATGTACGAATTAAGGGACTTCACGGTGGAAAAAGGAGCCATGCCTAGCCTCCACCGATTGTGCATGCAACGTTGCATGGGATTGACGACACTTCCAGATGGGCTGAGACATATTACTACACTCTGGGAATTAAGCTTCACAGAGATGTCTAGGACATTTCATAGTAGGCTTCAGGTCGGAGGAGATGATTTCTATAAAATCCAACACGTGCCTTCGATTGTATTTGCCAACATGCAGGAGGACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0001101 GO:0002230 GO:0002238 GO:0002239 GO:0002252 GO:0002376 GO:0002682 GO:0002697 GO:0002831 GO:0003674 GO:0005488 GO:0005575 GO:0005623 GO:0005886 GO:0005911 GO:0006950 GO:0006952 GO:0006955 GO:0007154 GO:0007165 GO:0008150 GO:0008219 GO:0009314 GO:0009416 GO:0009506 GO:0009605 GO:0009607 GO:0009611 GO:0009615 GO:0009620 GO:0009626 GO:0009628 GO:0009637 GO:0009642 GO:0009646 GO:0009719 GO:0009725 GO:0009751 GO:0009987 GO:0010033 GO:0012501 GO:0014070 GO:0016020 GO:0023052 GO:0030054 GO:0031347 GO:0032101 GO:0032870 GO:0033554 GO:0034050 GO:0035690 GO:0036094 GO:0042221 GO:0042493 GO:0043207 GO:0043900 GO:0044464 GO:0045087 GO:0046677 GO:0048583 GO:0050688 GO:0050691 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051607 GO:0051704 GO:0051707 GO:0051716 GO:0055044 GO:0065007 GO:0070887 GO:0071229 GO:0071236 GO:0071310 GO:0071407 GO:0071446 GO:0071495 GO:0071944 GO:0080134 GO:0097159 GO:0098542 GO:1901265 GO:1901363 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NB-ARC

Protein Analysis

936

Amino Acids

108.15

Weight (kDa)

8.34

Isoelectric Point (pI)

46.6

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000069)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca	FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica	MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica	Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis	pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis	RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata	RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora	Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii	Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa	Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha	Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana	Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	393, 1913
Acc16I	TGCGCA	1 cut(s)	738
AccB1I	GGYRCC	1 cut(s)	422
AciI	CCGC	4 cut(s)	512, 890, 1720, 2052
AclI	AACGTT	1 cut(s)	2632
AcoI	YGGCCR	1 cut(s)	2169
AcsI	RAATTY	7 cut(s)	44, 545, 612, 705, 749, 2197, 2274
AcuI	CTGAAG	3 cut(s)	27, 1335, 2717
AcvI	CACGTG	1 cut(s)	2770
AcyI	GRCGYC	1 cut(s)	637
AfaI	GTAC	6 cut(s)	174, 1173, 1234, 2287, 2355, 2567
AfiI	CCNNNNNNNGG	1 cut(s)	2479
AflII	CTTAAG	1 cut(s)	1175
AflIII	ACRYGT	2 cut(s)	175, 2767
Alw21I	GWGCWC	2 cut(s)	1125, 2262
Alw26I	GTCTC	4 cut(s)	1160, 1521, 1586, 2662
Alw44I	GTGCAC	1 cut(s)	2258
AoxI	GGCC	3 cut(s)	1744, 2169, 2421
ApaLI	GTGCAC	1 cut(s)	2258
ApeKI	GCWGC	7 cut(s)	112, 203, 445, 448, 869, 2226, 2449
ApoI	RAATTY	7 cut(s)	44, 545, 612, 705, 749, 2197, 2274
ArsI	GACNNNNNNTTYG	4 cut(s)	604, 636, 2173, 2205
AseI	ATTAAT	1 cut(s)	1155
Asp700I	GAANNNNTTC	2 cut(s)	466, 562
AspLEI	GCGC	1 cut(s)	739
AspS9I	GGNCC	2 cut(s)	1745, 1876
AsuHPI	GGTGA	2 cut(s)	547, 907
AsuII	TTCGAA	2 cut(s)	1044, 1651
AvaII	GGWCC	1 cut(s)	1876
AxyI	CCTNAGG	1 cut(s)	1933
BaeGI	GKGCMC	1 cut(s)	2262
BaeI	ACNNNNGTAYC	2 cut(s)	2277, 2310
BalI	TGGCCA	1 cut(s)	2171
BanI	GGYRCC	1 cut(s)	422
BbrPI	CACGTG	1 cut(s)	2770
BbsI	GAAGAC	1 cut(s)	1660
Bbv12I	GWGCWC	2 cut(s)	1125, 2262
BbvI	GCAGC	7 cut(s)	99, 190, 457, 460, 856, 2238, 2461
BccI	CCATC	9 cut(s)	1121, 1351, 1670, 1705, 1933, 2005, 2425, 2489, 2654
BceAI	ACGGC	2 cut(s)	1635, 2301
BcgI	CGANNNNNNTGC	2 cut(s)	1515, 1549
BcoDI	GTCTC	4 cut(s)	1160, 1521, 1586, 2662
BfaI	CTAG	6 cut(s)	417, 2333, 2441, 2607, 2712, 2806
BfrI	CTTAAG	1 cut(s)	1175
BglII	AGATCT	3 cut(s)	145, 689, 1727
BisI	GCNGC	7 cut(s)	113, 204, 446, 449, 870, 2227, 2450
BlsI	GCNGC	7 cut(s)	114, 205, 447, 450, 871, 2228, 2451
BmcAI	AGTACT	1 cut(s)	1173
Bme18I	GGWCC	1 cut(s)	1876
BmgT120I	GGNCC	2 cut(s)	1745, 1876
BmiI	GGNNCC	3 cut(s)	424, 1695, 2599
BmsI	GCATC	5 cut(s)	49, 130, 877, 1749, 1980
BpiI	GAAGAC	1 cut(s)	1660
BplI	GAGNNNNNCTC	2 cut(s)	1330, 1362
BpmI	CTGGAG	1 cut(s)	236
Bpu14I	TTCGAA	2 cut(s)	1044, 1651
BpuEI	CTTGAG	3 cut(s)	262, 1903, 2402
BsaAI	YACGTR	2 cut(s)	176, 2770
BsaBI	GATNNNNATC	2 cut(s)	144, 1016
BsaHI	GRCGYC	1 cut(s)	637
BsaJI	CCNNGG	2 cut(s)	1377, 1617
BsaXI	ACNNNNNCTCC	2 cut(s)	1583, 1613
Bsc4I	CCNNNNNNNGG	1 cut(s)	2479
Bse1I	ACTGG	4 cut(s)	1760, 2154, 2172, 2514
Bse21I	CCTNAGG	1 cut(s)	1933
Bse8I	GATNNNNATC	2 cut(s)	144, 1016
BseDI	CCNNGG	2 cut(s)	1377, 1617
BseGI	GGATG	9 cut(s)	51, 226, 772, 957, 1362, 1678, 1764, 2013, 2500
BseJI	GATNNNNATC	2 cut(s)	144, 1016
BseLI	CCNNNNNNNGG	1 cut(s)	2479
BseMII	CTCAG	6 cut(s)	99, 752, 1361, 2012, 2159, 2657
BseNI	ACTGG	4 cut(s)	1760, 2154, 2172, 2514
BseRI	GAGGAG	3 cut(s)	1430, 1568, 2757
BseSI	GKGCMC	1 cut(s)	2262
BseXI	GCAGC	7 cut(s)	99, 190, 457, 460, 856, 2238, 2461
BseYI	CCCAGC	1 cut(s)	993
BshFI	GGCC	3 cut(s)	1746, 2171, 2423
BshNI	GGYRCC	1 cut(s)	422
BsiHKAI	GWGCWC	2 cut(s)	1125, 2262
BslFI	GGGAC	1 cut(s)	2591
BslI	CCNNNNNNNGG	1 cut(s)	2479
BsmAI	GTCTC	4 cut(s)	1160, 1521, 1586, 2662
BsmFI	GGGAC	1 cut(s)	2591
BsmI	GAATGC	1 cut(s)	2241
BsnI	GGCC	3 cut(s)	1746, 2171, 2423
Bsp119I	TTCGAA	2 cut(s)	1044, 1651
Bsp1286I	GDGCHC	2 cut(s)	1125, 2262
Bsp143I	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
BspACI	CCGC	4 cut(s)	512, 890, 1720, 2052
BspANI	GGCC	3 cut(s)	1746, 2171, 2423
BspCNI	CTCAG	6 cut(s)	100, 753, 1360, 2013, 2158, 2658
BspHI	TCATGA	2 cut(s)	1513, 2086
BspLI	GGNNCC	3 cut(s)	424, 1695, 2599
BspQI	GCTCTTC	1 cut(s)	1611
BspT104I	TTCGAA	2 cut(s)	1044, 1651
BspT107I	GGYRCC	1 cut(s)	422
BspTI	CTTAAG	1 cut(s)	1175
BsrI	ACTGG	4 cut(s)	1760, 2154, 2172, 2514
BssECI	CCNNGG	2 cut(s)	1377, 1617
BssMI	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
BssNI	GRCGYC	1 cut(s)	637
BssT1I	CCWWGG	1 cut(s)	1377
Bst4CI	ACNGT	9 cut(s)	172, 1171, 1272, 1573, 2076, 2353, 2358, 2403, 2587
Bst6I	CTCTTC	5 cut(s)	1021, 1195, 1545, 1611, 2088
BstACI	GRCGYC	1 cut(s)	637
BstAFI	CTTAAG	1 cut(s)	1175
BstAPI	GCANNNNNTGC	1 cut(s)	121
BstBAI	YACGTR	2 cut(s)	176, 2770
BstBI	TTCGAA	2 cut(s)	1044, 1651
BstC8I	GCNNGC	4 cut(s)	383, 1103, 1125, 2627
BstDSI	CCRYGG	1 cut(s)	1617
BstENI	CCTNNNNNAGG	1 cut(s)	2477
BstF5I	GGATG	9 cut(s)	51, 226, 772, 957, 1362, 1678, 1764, 2013, 2500
BstHHI	GCGC	1 cut(s)	739
BstKTI	GATC	9 cut(s)	148, 214, 319, 692, 1519, 1730, 2140, 2239, 2416
BstMAI	GTCTC	4 cut(s)	1160, 1521, 1586, 2662
BstMBI	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
BstMWI	GCNNNNNNNGC	5 cut(s)	121, 457, 734, 1628, 2446
BstNSI	RCATGY	4 cut(s)	278, 2566, 2629, 2797
BstSLI	GKGCMC	1 cut(s)	2262
BstV1I	GCAGC	7 cut(s)	99, 190, 457, 460, 856, 2238, 2461
BstV2I	GAAGAC	1 cut(s)	1660
BstX2I	RGATCY	3 cut(s)	145, 689, 1727
BstXI	CCANNNNNNTGG	3 cut(s)	1669, 1755, 2431
BstYI	RGATCY	3 cut(s)	145, 689, 1727
Bsu36I	CCTNAGG	1 cut(s)	1933
BsuRI	GGCC	3 cut(s)	1746, 2171, 2423
BtgI	CCRYGG	1 cut(s)	1617
BtsCI	GGATG	9 cut(s)	51, 226, 772, 957, 1362, 1678, 1764, 2013, 2500
BtsI	GCAGTG	1 cut(s)	732
BtsIMutI	CAGTG	5 cut(s)	732, 860, 2165, 2399, 2507
Cac8I	GCNNGC	4 cut(s)	383, 1103, 1125, 2627
CciI	TCATGA	2 cut(s)	1513, 2086
CfoI	GCGC	1 cut(s)	739
Cfr13I	GGNCC	2 cut(s)	1745, 1876
CseI	GACGC	1 cut(s)	645
Csp6I	GTAC	6 cut(s)	173, 1172, 1233, 2286, 2354, 2566
CviQI	GTAC	6 cut(s)	173, 1172, 1233, 2286, 2354, 2566
DpnI	GATC	9 cut(s)	147, 213, 318, 691, 1518, 1729, 2139, 2238, 2415
DpnII	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
DraI	TTTAAA	1 cut(s)	1281
EaeI	YGGCCR	1 cut(s)	2169
Eam1104I	CTCTTC	5 cut(s)	1021, 1195, 1545, 1611, 2088
EarI	CTCTTC	5 cut(s)	1021, 1195, 1545, 1611, 2088
Eco130I	CCWWGG	1 cut(s)	1377
Eco32I	GATATC	1 cut(s)	1329
Eco47I	GGWCC	1 cut(s)	1876
Eco57I	CTGAAG	3 cut(s)	27, 1335, 2717
Eco72I	CACGTG	1 cut(s)	2770
Eco81I	CCTNAGG	1 cut(s)	1933
EcoNI	CCTNNNNNAGG	1 cut(s)	2477
EcoRI	GAATTC	2 cut(s)	44, 2274
EcoRV	GATATC	1 cut(s)	1329
EcoT14I	CCWWGG	1 cut(s)	1377
EcoT22I	ATGCAT	1 cut(s)	1192
ErhI	CCWWGG	1 cut(s)	1377
FalI	AAGNNNNNCTT	2 cut(s)	448, 480
FaqI	GGGAC	1 cut(s)	2591
Fnu4HI	GCNGC	7 cut(s)	113, 204, 446, 449, 870, 2227, 2450
FokI	GGATG	9 cut(s)	38, 233, 779, 944, 1369, 1685, 1771, 2020, 2507
Fsp4HI	GCNGC	7 cut(s)	113, 204, 446, 449, 870, 2227, 2450
FspBI	CTAG	6 cut(s)	417, 2333, 2441, 2607, 2712, 2806
FspI	TGCGCA	1 cut(s)	738
GlaI	GCGC	1 cut(s)	738
GluI	GCNGC	7 cut(s)	113, 204, 446, 449, 870, 2227, 2450
GsaI	CCCAGC	1 cut(s)	997
GsuI	CTGGAG	1 cut(s)	236
HaeIII	GGCC	3 cut(s)	1746, 2171, 2423
HgaI	GACGC	1 cut(s)	645
HhaI	GCGC	1 cut(s)	739
Hin1I	GRCGYC	1 cut(s)	637
Hin6I	GCGC	1 cut(s)	737
HinP1I	GCGC	1 cut(s)	737
HincII	GTYRAC	3 cut(s)	1344, 2151, 2397
HindII	GTYRAC	3 cut(s)	1344, 2151, 2397
HindIII	AAGCTT	3 cut(s)	379, 2527, 2695
HinfI	GANTC	7 cut(s)	78, 857, 954, 1345, 2098, 2216, 2543
HpaI	GTTAAC	2 cut(s)	2151, 2397
HphI	GGTGA	2 cut(s)	547, 907
Hpy166II	GTNNAC	6 cut(s)	1344, 1879, 2079, 2151, 2260, 2397
Hpy188I	TCNGA	4 cut(s)	135, 282, 2382, 2741
Hpy188III	TCNNGA	8 cut(s)	215, 241, 417, 1514, 1961, 1994, 2087, 2657
Hpy8I	GTNNAC	6 cut(s)	1344, 1879, 2079, 2151, 2260, 2397
HpyCH4III	ACNGT	9 cut(s)	172, 1171, 1272, 1573, 2076, 2353, 2358, 2403, 2587
HpyCH4IV	ACGT	4 cut(s)	175, 484, 2632, 2769
HpyF10VI	GCNNNNNNNGC	5 cut(s)	121, 457, 734, 1628, 2446
HpySE526I	ACGT	4 cut(s)	175, 484, 2632, 2769
Hsp92I	GRCGYC	1 cut(s)	637
HspAI	GCGC	1 cut(s)	737
KspAI	GTTAAC	2 cut(s)	2151, 2397
Kzo9I	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
LguI	GCTCTTC	1 cut(s)	1611
LmnI	GCTCC	2 cut(s)	840, 2597
Lsp1109I	GCAGC	7 cut(s)	99, 190, 457, 460, 856, 2238, 2461
LweI	GCATC	5 cut(s)	49, 130, 877, 1749, 1980
MaeI	CTAG	6 cut(s)	417, 2333, 2441, 2607, 2712, 2806
MaeII	ACGT	4 cut(s)	175, 484, 2632, 2769
MaeIII	GTNAC	7 cut(s)	333, 349, 858, 1225, 2126, 2179, 2358
MalI	GATC	9 cut(s)	147, 213, 318, 691, 1518, 1729, 2139, 2238, 2415
MboI	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
MflI	RGATCY	3 cut(s)	145, 689, 1727
MhlI	GDGCHC	2 cut(s)	1125, 2262
MlsI	TGGCCA	1 cut(s)	2171
MluNI	TGGCCA	1 cut(s)	2171
MlyI	GAGTC	4 cut(s)	87, 866, 1339, 2092
MmeI	TCCRAC	2 cut(s)	2719, 2788
Mox20I	TGGCCA	1 cut(s)	2171
Mph1103I	ATGCAT	1 cut(s)	1192
MroXI	GAANNNNTTC	2 cut(s)	466, 562
MscI	TGGCCA	1 cut(s)	2171
MslI	CAYNNNNRTG	8 cut(s)	948, 1058, 1118, 1218, 1667, 2177, 2561, 2705
Msp20I	TGGCCA	1 cut(s)	2171
MspCI	CTTAAG	1 cut(s)	1175
Mva1269I	GAATGC	1 cut(s)	2241
MwoI	GCNNNNNNNGC	5 cut(s)	121, 457, 734, 1628, 2446
NdeII	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
NlaIV	GGNNCC	3 cut(s)	424, 1695, 2599
NmuCI	GTSAC	5 cut(s)	333, 858, 1225, 2126, 2179
NsbI	TGCGCA	1 cut(s)	738
NsiI	ATGCAT	1 cut(s)	1192
NspI	RCATGY	4 cut(s)	278, 2566, 2629, 2797
NspV	TTCGAA	2 cut(s)	1044, 1651
PacI	TTAATTAA	1 cut(s)	714
PaeI	GCATGC	1 cut(s)	2629
PagI	TCATGA	2 cut(s)	1513, 2086
PciSI	GCTCTTC	1 cut(s)	1611
PcsI	WCGNNNNNNNCGW	1 cut(s)	1235
PctI	GAATGC	1 cut(s)	2241
PdmI	GAANNNNTTC	2 cut(s)	466, 562
PfeI	GAWTC	3 cut(s)	954, 2216, 2543
PkrI	GCNGC	7 cut(s)	114, 205, 447, 450, 871, 2228, 2451
PleI	GAGTC	4 cut(s)	86, 865, 1339, 2092
PmaCI	CACGTG	1 cut(s)	2770
PmlI	CACGTG	1 cut(s)	2770
PpsI	GAGTC	4 cut(s)	86, 865, 1339, 2092
Ppu21I	YACGTR	2 cut(s)	176, 2770
PshBI	ATTAAT	1 cut(s)	1155
PsiI	TTATAA	2 cut(s)	393, 1913
Psp1406I	AACGTT	1 cut(s)	2632
PspCI	CACGTG	1 cut(s)	2770
PspFI	CCCAGC	1 cut(s)	993
PspN4I	GGNNCC	3 cut(s)	424, 1695, 2599
PspPI	GGNCC	2 cut(s)	1745, 1876
PsuI	RGATCY	3 cut(s)	145, 689, 1727
RsaI	GTAC	6 cut(s)	174, 1173, 1234, 2287, 2355, 2567
RsaNI	GTAC	6 cut(s)	173, 1172, 1233, 2286, 2354, 2566
RseI	CAYNNNNRTG	8 cut(s)	948, 1058, 1118, 1218, 1667, 2177, 2561, 2705
SapI	GCTCTTC	1 cut(s)	1611
SatI	GCNGC	7 cut(s)	113, 204, 446, 449, 870, 2227, 2450
Sau3AI	GATC	9 cut(s)	145, 211, 316, 689, 1516, 1727, 2137, 2236, 2413
Sau96I	GGNCC	2 cut(s)	1745, 1876
ScaI	AGTACT	1 cut(s)	1173
SchI	GAGTC	4 cut(s)	87, 866, 1339, 2092
SduI	GDGCHC	2 cut(s)	1125, 2262
SfaNI	GCATC	5 cut(s)	49, 130, 877, 1749, 1980
SfuI	TTCGAA	2 cut(s)	1044, 1651
SinI	GGWCC	1 cut(s)	1876
SmiMI	CAYNNNNRTG	8 cut(s)	948, 1058, 1118, 1218, 1667, 2177, 2561, 2705
SmlI	CTYRAG	4 cut(s)	241, 1175, 1882, 2417
SmoI	CTYRAG	4 cut(s)	241, 1175, 1882, 2417
SphI	GCATGC	1 cut(s)	2629
SsiI	CCGC	4 cut(s)	512, 890, 1720, 2052
SspI	AATATT	3 cut(s)	234, 909, 1791
SspMI	CTAG	6 cut(s)	417, 2333, 2441, 2607, 2712, 2806
StyI	CCWWGG	1 cut(s)	1377
TaaI	ACNGT	9 cut(s)	172, 1171, 1272, 1573, 2076, 2353, 2358, 2403, 2587
TaiI	ACGT	4 cut(s)	178, 487, 2635, 2772
TaqI	TCGA	5 cut(s)	1044, 1626, 1651, 2071, 2777
TatI	WGTACW	2 cut(s)	1171, 2353
TfiI	GAWTC	3 cut(s)	954, 2216, 2543
TscAI	CASTG	5 cut(s)	739, 867, 2172, 2406, 2514
TseFI	GTSAC	5 cut(s)	333, 858, 1225, 2126, 2179
TseI	GCWGC	7 cut(s)	112, 203, 445, 448, 869, 2226, 2449
Tsp45I	GTSAC	5 cut(s)	333, 858, 1225, 2126, 2179
TspGWI	ACGGA	2 cut(s)	1992, 2303
TspRI	CASTG	5 cut(s)	739, 867, 2172, 2406, 2514
Vha464I	CTTAAG	1 cut(s)	1175
VneI	GTGCAC	1 cut(s)	2258
VpaK11BI	GGWCC	1 cut(s)	1876
VspI	ATTAAT	1 cut(s)	1155
XagI	CCTNNNNNAGG	1 cut(s)	2477
XapI	RAATTY	7 cut(s)	44, 545, 612, 705, 749, 2197, 2274
XbaI	TCTAGA	1 cut(s)	416
XceI	RCATGY	4 cut(s)	278, 2566, 2629, 2797
XcmI	CCANNNNNNNNNTGG	1 cut(s)	2001
XmnI	GAANNNNTTC	2 cut(s)	466, 562
XspI	CTAG	6 cut(s)	417, 2333, 2441, 2607, 2712, 2806
ZrmI	AGTACT	1 cut(s)	1173
Zsp2I	ATGCAT	1 cut(s)	1192

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.