Rorug01G0256900

disease resistance

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Reverse (-)
36667242 .. 36674300
7059 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0256900.1

Sequence Viewer

Length: 1668 bp
ATGCCTTACACCCAAACAGTAACCACCACAATGGGCGAGGCCGGCCTCACCCTCACCGCGCCGCTCCTCTCTCCTCCTCCTCCTCCGCCGTCCGATCAACCCCACTTGATCGTCACCGTCCACGACGACGACGACGACGACCACGGCAACGGCAACGGCAACGGCAACCCGTTTGCGTTTCTCGGGTCGGGCGGGTTTAAGGTGGCCGTATCGACGACGGCGGATCCGTTCAAGAACCATACTTTGAAAATCGGAGGGGTTTACGAGTGGTTAAAGATCGGGGTTTGCTTCCCCATCGCGATTGTGAGGCTTGTGATCTTTGGGGTTTCGTTGCTGATTGGGTTTGTGGCCACCAAATTGGCTCTGTTGGGATGGAAGGATAGGCAGAACCCTATGCCCAAGTGGAGGTGTAGGATCATGTGGATCACTAGGGTCTGTACCAGATGTATTCTCTTCGCCTTTGGTTACCATTGGATAAGACGGATAGGAAAACCTGCTCCAAGAGCAACCGCCCCAATTGTTGTATCTAATCATGTATCTTTTATAGAACCTATATTCTACTTTTATGAACTATTCCCTACGATTGTCGCATCTGAGTCCCATGATTCCCTACCTTTTGTTGGAACCATCATCAGAGCAATGCAGGTGATATATGTTAATAGGTTTTCACCATCATCAAGGAGGCAAGCTGTTACTGAAATAAAGAGAAAAGCTTCATGCGATAGATTTCCTCGAGTGCTCCTATTTCCTGAGGGAACCACAACCAACGGAAGATATCTCATTTCATTTGAACTTGGTGCATTCATCCCTGGTTACCCAATCCAACCAGTAATTGTACGCTATCCTCATGTGCACTTTGATCAATCCTGGGGGCACATTTCTTTGCCAAGGCTCATGTTTCGAATGTTCACGCAATTTCACAATTTCATGGAGGTAGAGTACCTTCCTGTTGTTTCACCTCTTGATAACAAGAAAGAAAGTGCTTTCCACTTTGCTCAGAGGACTAGTCATGCTATGGCAGCTGCACTCAATGTTGTACAGACATCTCATTCTTTTGGAGACTTGATGCTTCTCATGAAAGCAGCTGATTCAAAATCGAAACAGGTGCGGCCCTCAGCTTACATGGTTGAAATGGCGAGTGTAAAATCTGTACTCAATATAAGCAGCATGGAAGCTGTTGACCTTTTGGATAGATTTCTTTCTATGAATCCAGACCCCAGTGGTCATGTTACCTATCATGATTTCTTGAGGGTTCTAAGACTCAAGGCCTGTACCTTTTCTGAAGAGATATTTGCATTCATCGATGTTGACAAAAATCGAGCCATCACATTTAAGCAGTTCTTATTTGGATCAGCGCATGTCTTGAAGCAACGATTATTCCGGCAAGCCTGTGCATTAGCTTTTTCTGAATGTGTTTCTGAGGATAATATCTACGTTTTAGAACAGCAATTTGGAGACACTATCAGGCCTGCAATCCCGGATTTGACTGAAAATGAGATCCGTGAGCTGTTCAATCTTTTTGATACTGATCTTGATGGGAGAATCAGCAAGGACGATTTTTTCACCTGTCTAAGAAGAAATCCACTACTAATTGCCCTTTTCTCACCTTGCTTACTTAACAAGGACTTCTCAGAAGATGGTAATAGGTTGGTGGAGGAGATTGTGTAG

Protein Analysis

555

Amino Acids

62.75

Weight (kDa)

7.64

Isoelectric Point (pI)

43.19

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acyltransferase PF01553 167 - 279 2.9e-14 Acyltransferase
EF-hand_7 PF13499 467 - 521 3.4e-06 EF-hand domain pair
EF-hand_8 PF13833 494 - 527 2.5e-08 EF-hand domain pair
EF-hand_6 PF13405 499 - 525 7e-06 EF-hand domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 634
Acc36I ACCTGC 2 cut(s) 502, 634
AccBSI CCGCTC 1 cut(s) 64
AccII CGCG 2 cut(s) 59, 299
AciI CCGC 7 cut(s) 57, 62, 86, 192, 221, 510, 1108
AclWI GGATC 6 cut(s) 218, 231, 422, 431, 1357, 1492
AcoI YGGCCR 2 cut(s) 204, 348
AcuI CTGAAG 1 cut(s) 1302
AfaI GTAC 6 cut(s) 439, 837, 941, 1038, 1152, 1273
AfiI CCNNNNNNNGG 2 cut(s) 405, 620
AgsI TTSAA 7 cut(s) 232, 247, 791, 1092, 1130, 1366, 1513
AhlI ACTAGT 1 cut(s) 1004
AjnI CCWGG 2 cut(s) 808, 866
AjuI GAANNNNNNNTTGG 2 cut(s) 1434, 1466
AluBI AGCT 8 cut(s) 689, 713, 1022, 1085, 1118, 1175, 1400, 1507
AluI AGCT 8 cut(s) 689, 713, 1022, 1085, 1118, 1175, 1400, 1507
Alw21I GWGCWC 2 cut(s) 741, 855
Alw26I GTCTC 2 cut(s) 1053, 1449
Alw44I GTGCAC 1 cut(s) 851
AlwI GGATC 6 cut(s) 218, 231, 422, 431, 1357, 1492
Ama87I CYCGRG 2 cut(s) 182, 732
AoxI GGCC 7 cut(s) 39, 43, 204, 348, 1109, 1266, 1466
ApaLI GTGCAC 1 cut(s) 851
ApeKI GCWGC 4 cut(s) 1019, 1022, 1082, 1164
Asp700I GAANNNNTTC 1 cut(s) 712
AspLEI GCGC 2 cut(s) 61, 1357
AspS9I GGNCC 1 cut(s) 1110
AsuC2I CCSGG 1 cut(s) 1478
AsuHPI GGTGA 8 cut(s) 40, 46, 106, 658, 660, 948, 1555, 1596
AsuII TTCGAA 1 cut(s) 901
AvaI CYCGRG 2 cut(s) 182, 732
AxyI CCTNAGG 1 cut(s) 750
BaeGI GKGCMC 2 cut(s) 855, 876
BalI TGGCCA 1 cut(s) 350
BamHI GGATCC 1 cut(s) 223
BarI GAAGNNNNNNTAC 2 cut(s) 927, 959
Bbv12I GWGCWC 2 cut(s) 741, 855
BbvCI CCTCAGC 1 cut(s) 1114
BbvI GCAGC 4 cut(s) 1009, 1031, 1094, 1176
BccI CCATC 7 cut(s) 302, 366, 635, 679, 1331, 1529, 1631
BceAI ACGGC 7 cut(s) 73, 160, 166, 172, 178, 191, 234
BcgI CGANNNNNNTGC 2 cut(s) 1087, 1121
BciT130I CCWGG 2 cut(s) 810, 868
BclI TGATCA 1 cut(s) 859
BcnI CCSGG 1 cut(s) 1478
BcoDI GTCTC 2 cut(s) 1053, 1449
BcuI ACTAGT 1 cut(s) 1004
BfaI CTAG 2 cut(s) 429, 1005
BfuAI ACCTGC 2 cut(s) 502, 634
BisI GCNGC 6 cut(s) 62, 1020, 1023, 1083, 1109, 1165
BlsI GCNGC 6 cut(s) 63, 1021, 1024, 1084, 1110, 1166
Bme1390I CCNGG 3 cut(s) 810, 868, 1478
BmeT110I CYCGRG 2 cut(s) 182, 732
BmgT120I GGNCC 1 cut(s) 1110
BmiI GGNNCC 3 cut(s) 225, 625, 757
BmrFI CCNGG 3 cut(s) 810, 868, 1478
BmrI ACTGGG 1 cut(s) 1212
BmsI GCATC 2 cut(s) 599, 1056
BmuI ACTGGG 1 cut(s) 1212
Bpu10I CCTNAGC 1 cut(s) 1114
Bpu14I TTCGAA 1 cut(s) 901
BpuEI CTTGAG 2 cut(s) 1247, 1267
BpuMI CCSGG 1 cut(s) 1478
Bsa29I ATCGAT 1 cut(s) 1302
BsaBI GATNNNNATC 1 cut(s) 1527
BsaJI CCNNGG 4 cut(s) 142, 808, 867, 887
BsaXI ACNNNNNCTCC 3 cut(s) 923, 953, 1649
Bsc4I CCNNNNNNNGG 2 cut(s) 405, 620
Bse118I RCCGGY 1 cut(s) 41
Bse1I ACTGG 2 cut(s) 827, 1218
Bse21I CCTNAGG 1 cut(s) 750
Bse3DI GCAATG 1 cut(s) 645
Bse8I GATNNNNATC 1 cut(s) 1527
BseBI CCWGG 2 cut(s) 810, 868
BseCI ATCGAT 1 cut(s) 1302
BseDI CCNNGG 4 cut(s) 142, 808, 867, 887
BseGI GGATG 2 cut(s) 377, 804
BseJI GATNNNNATC 1 cut(s) 1527
BseLI CCNNNNNNNGG 2 cut(s) 405, 620
BseMI GCAATG 1 cut(s) 645
BseMII CTCAG 6 cut(s) 585, 741, 1010, 1128, 1410, 1644
BseNI ACTGG 2 cut(s) 827, 1218
BseRI GAGGAG 5 cut(s) 56, 63, 66, 69, 72
BseSI GKGCMC 2 cut(s) 855, 876
BseXI GCAGC 4 cut(s) 1009, 1031, 1094, 1176
BsgI GTGCAG 1 cut(s) 1008
Bsh1236I CGCG 2 cut(s) 59, 299
BshFI GGCC 7 cut(s) 41, 45, 206, 350, 1111, 1268, 1468
BshVI ATCGAT 1 cut(s) 1302
BsiHKAI GWGCWC 2 cut(s) 741, 855
BsiHKCI CYCGRG 2 cut(s) 182, 732
BsiSI CCGG 3 cut(s) 42, 1381, 1478
BslFI GGGAC 1 cut(s) 583
BslI CCNNNNNNNGG 2 cut(s) 405, 620
BsmAI GTCTC 2 cut(s) 1053, 1449
BsmFI GGGAC 1 cut(s) 583
BsmI GAATGC 2 cut(s) 800, 1295
BsnI GGCC 7 cut(s) 41, 45, 206, 350, 1111, 1268, 1468
BsoBI CYCGRG 2 cut(s) 182, 732
Bsp119I TTCGAA 1 cut(s) 901
Bsp1286I GDGCHC 3 cut(s) 741, 855, 876
Bsp1407I TGTACA 1 cut(s) 1036
Bsp68I TCGCGA 1 cut(s) 299
BspACI CCGC 7 cut(s) 57, 62, 86, 192, 221, 510, 1108
BspANI GGCC 7 cut(s) 41, 45, 206, 350, 1111, 1268, 1468
BspCNI CTCAG 6 cut(s) 586, 742, 1009, 1127, 1411, 1643
BspDI ATCGAT 1 cut(s) 1302
BspFNI CGCG 2 cut(s) 59, 299
BspHI TCATGA 2 cut(s) 1074, 1237
BspLI GGNNCC 3 cut(s) 225, 625, 757
BspMI ACCTGC 2 cut(s) 502, 634
BspPI GGATC 6 cut(s) 218, 231, 422, 431, 1357, 1492
BspT104I TTCGAA 1 cut(s) 901
BsrBI CCGCTC 1 cut(s) 64
BsrDI GCAATG 1 cut(s) 645
BsrFI RCCGGY 1 cut(s) 41
BsrGI TGTACA 1 cut(s) 1036
BsrI ACTGG 2 cut(s) 827, 1218
BssAI RCCGGY 1 cut(s) 41
BssECI CCNNGG 4 cut(s) 142, 808, 867, 887
BssT1I CCWWGG 1 cut(s) 887
Bst2UI CCWGG 2 cut(s) 810, 868
Bst4CI ACNGT 2 cut(s) 19, 118
Bst6I CTCTTC 2 cut(s) 458, 1278
BstAUI TGTACA 1 cut(s) 1036
BstBI TTCGAA 1 cut(s) 901
BstC8I GCNNGC 4 cut(s) 43, 687, 1386, 1470
BstDEI CTNAG 8 cut(s) 594, 750, 996, 1114, 1256, 1419, 1571, 1630
BstDSI CCRYGG 1 cut(s) 142
BstEII GGTNACC 2 cut(s) 464, 812
BstF5I GGATG 2 cut(s) 377, 804
BstFNI CGCG 2 cut(s) 59, 299
BstHHI GCGC 2 cut(s) 61, 1357
BstMAI GTCTC 2 cut(s) 1053, 1449
BstMWI GCNNNNNNNGC 3 cut(s) 42, 503, 1019
BstNI CCWGG 2 cut(s) 810, 868
BstNSI RCATGY 1 cut(s) 1361
BstPI GGTNACC 2 cut(s) 464, 812
BstSCI CCNGG 3 cut(s) 808, 866, 1476
BstSLI GKGCMC 2 cut(s) 855, 876
BstUI CGCG 2 cut(s) 59, 299
BstV1I GCAGC 4 cut(s) 1009, 1031, 1094, 1176
BstX2I RGATCY 2 cut(s) 223, 1497
BstXI CCANNNNNNTGG 2 cut(s) 31, 358
BstYI RGATCY 2 cut(s) 223, 1497
Bsu15I ATCGAT 1 cut(s) 1302
Bsu36I CCTNAGG 1 cut(s) 750
BsuRI GGCC 7 cut(s) 41, 45, 206, 350, 1111, 1268, 1468
BsuTUI ATCGAT 1 cut(s) 1302
BtgI CCRYGG 1 cut(s) 142
BtgZI GCGATG 1 cut(s) 280
BtsCI GGATG 2 cut(s) 377, 804
BtsIMutI CAGTG 1 cut(s) 1225
BtuMI TCGCGA 1 cut(s) 299
BveI ACCTGC 2 cut(s) 502, 634
Cac8I GCNNGC 4 cut(s) 43, 687, 1386, 1470
CciI TCATGA 2 cut(s) 1074, 1237
CfoI GCGC 2 cut(s) 61, 1357
Cfr10I RCCGGY 1 cut(s) 41
Cfr13I GGNCC 1 cut(s) 1110
ClaI ATCGAT 1 cut(s) 1302
Csp6I GTAC 6 cut(s) 438, 836, 940, 1037, 1151, 1272
CviQI GTAC 6 cut(s) 438, 836, 940, 1037, 1151, 1272
DdeI CTNAG 8 cut(s) 594, 750, 996, 1114, 1256, 1419, 1571, 1630
EaeI YGGCCR 2 cut(s) 204, 348
Eam1104I CTCTTC 2 cut(s) 458, 1278
EarI CTCTTC 2 cut(s) 458, 1278
EciI GGCGGA 2 cut(s) 75, 236
Eco130I CCWWGG 1 cut(s) 887
Eco147I AGGCCT 2 cut(s) 1268, 1468
Eco32I GATATC 1 cut(s) 776
Eco57I CTGAAG 1 cut(s) 1302
Eco81I CCTNAGG 1 cut(s) 750
Eco88I CYCGRG 2 cut(s) 182, 732
Eco91I GGTNACC 2 cut(s) 464, 812
EcoO65I GGTNACC 2 cut(s) 464, 812
EcoRII CCWGG 2 cut(s) 808, 866
EcoRV GATATC 1 cut(s) 776
EcoT14I CCWWGG 1 cut(s) 887
ErhI CCWWGG 1 cut(s) 887
FalI AAGNNNNNCTT 2 cut(s) 1325, 1357
FaqI GGGAC 1 cut(s) 583
FauI CCCGC 1 cut(s) 185
FbaI TGATCA 1 cut(s) 859
Fnu4HI GCNGC 6 cut(s) 62, 1020, 1023, 1083, 1109, 1165
FokI GGATG 2 cut(s) 384, 791
FseI GGCCGGCC 1 cut(s) 45
Fsp4HI GCNGC 6 cut(s) 62, 1020, 1023, 1083, 1109, 1165
FspBI CTAG 2 cut(s) 429, 1005
GlaI GCGC 2 cut(s) 60, 1356
GluI GCNGC 6 cut(s) 62, 1020, 1023, 1083, 1109, 1165
HaeIII GGCC 7 cut(s) 41, 45, 206, 350, 1111, 1268, 1468
HapII CCGG 3 cut(s) 42, 1381, 1478
HhaI GCGC 2 cut(s) 61, 1357
Hin6I GCGC 2 cut(s) 59, 1355
HinP1I GCGC 2 cut(s) 59, 1355
HincII GTYRAC 2 cut(s) 1180, 1309
HindII GTYRAC 2 cut(s) 1180, 1309
HindIII AAGCTT 1 cut(s) 711
HinfI GANTC 6 cut(s) 596, 605, 1088, 1207, 1260, 1542
HpaII CCGG 3 cut(s) 42, 1381, 1478
HphI GGTGA 8 cut(s) 40, 46, 106, 658, 660, 948, 1555, 1596
Hpy166II GTNNAC 6 cut(s) 121, 262, 853, 909, 1180, 1309
Hpy188I TCNGA 9 cut(s) 94, 254, 595, 635, 999, 1282, 1408, 1420, 1633
Hpy8I GTNNAC 6 cut(s) 121, 262, 853, 909, 1180, 1309
Hpy99I CGWCG 7 cut(s) 128, 131, 134, 137, 140, 217, 220
HpyAV CCTTC 2 cut(s) 370, 953
HpyCH4III ACNGT 2 cut(s) 19, 118
HpyCH4IV ACGT 1 cut(s) 1434
HpyCH4V TGCA 7 cut(s) 643, 800, 853, 1025, 1295, 1394, 1472
HpyF10VI GCNNNNNNNGC 3 cut(s) 42, 503, 1019
HpyF3I CTNAG 8 cut(s) 594, 750, 996, 1114, 1256, 1419, 1571, 1630
HpySE526I ACGT 1 cut(s) 1434
HspAI GCGC 2 cut(s) 59, 1355
KroI GCCGGC 1 cut(s) 41
KroNI GCCGGC 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 859
LmnI GCTCC 3 cut(s) 69, 502, 744
Lsp1109I GCAGC 4 cut(s) 1009, 1031, 1094, 1176
LweI GCATC 2 cut(s) 599, 1056
MaeI CTAG 2 cut(s) 429, 1005
MaeII ACGT 1 cut(s) 1434
MaeIII GTNAC 6 cut(s) 19, 112, 464, 691, 812, 1228
MbiI CCGCTC 1 cut(s) 64
MboII GAAGA 5 cut(s) 445, 783, 1295, 1587, 1646
MfeI CAATTG 1 cut(s) 516
MflI RGATCY 2 cut(s) 223, 1497
MhlI GDGCHC 3 cut(s) 741, 855, 876
MlsI TGGCCA 1 cut(s) 350
MluCI AATT 7 cut(s) 356, 516, 831, 914, 922, 1448, 1590
MluNI TGGCCA 1 cut(s) 350
MlyI GAGTC 2 cut(s) 605, 1254
MmeI TCCRAC 2 cut(s) 601, 847
Mox20I TGGCCA 1 cut(s) 350
MroNI GCCGGC 1 cut(s) 41
MroXI GAANNNNTTC 1 cut(s) 712
MscI TGGCCA 1 cut(s) 350
MseI TTAA 5 cut(s) 198, 272, 657, 1332, 1617
MslI CAYNNNNRTG 1 cut(s) 29
Msp20I TGGCCA 1 cut(s) 350
MspA1I CMGCKG 2 cut(s) 1022, 1085
MspI CCGG 3 cut(s) 42, 1381, 1478
MspR9I CCNGG 3 cut(s) 810, 868, 1478
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 2 cut(s) 800, 1295
MvaI CCWGG 2 cut(s) 810, 868
MvnI CGCG 2 cut(s) 59, 299
MwoI GCNNNNNNNGC 3 cut(s) 42, 503, 1019
NaeI GCCGGC 1 cut(s) 43
NciI CCSGG 1 cut(s) 1478
NgoMIV GCCGGC 1 cut(s) 41
NlaIV GGNNCC 3 cut(s) 225, 625, 757
NmuCI GTSAC 1 cut(s) 112
NruI TCGCGA 1 cut(s) 299
NspI RCATGY 1 cut(s) 1361
NspV TTCGAA 1 cut(s) 901
PaeR7I CTCGAG 1 cut(s) 732
PagI TCATGA 2 cut(s) 1074, 1237
PaqCI CACCTGC 1 cut(s) 634
PceI AGGCCT 2 cut(s) 1268, 1468
PcsI WCGNNNNNNNCGW 4 cut(s) 129, 132, 135, 224
PctI GAATGC 2 cut(s) 800, 1295
PdiI GCCGGC 1 cut(s) 43
PdmI GAANNNNTTC 1 cut(s) 712
PfeI GAWTC 4 cut(s) 605, 1088, 1207, 1542
PfoI TCCNGGA 1 cut(s) 1476
PkrI GCNGC 6 cut(s) 63, 1021, 1024, 1084, 1110, 1166
PleI GAGTC 2 cut(s) 604, 1254
PpsI GAGTC 2 cut(s) 604, 1254
Psp6I CCWGG 2 cut(s) 808, 866
PspEI GGTNACC 2 cut(s) 464, 812
PspGI CCWGG 2 cut(s) 808, 866
PspN4I GGNNCC 3 cut(s) 225, 625, 757
PspPI GGNCC 1 cut(s) 1110
PspXI VCTCGAGB 1 cut(s) 732
PsuI RGATCY 2 cut(s) 223, 1497
PvuII CAGCTG 2 cut(s) 1022, 1085
RigI GGCCGGCC 1 cut(s) 45
RruI TCGCGA 1 cut(s) 299
RsaI GTAC 6 cut(s) 439, 837, 941, 1038, 1152, 1273
RsaNI GTAC 6 cut(s) 438, 836, 940, 1037, 1151, 1272
RseI CAYNNNNRTG 1 cut(s) 29
SaqAI TTAA 5 cut(s) 198, 272, 657, 1332, 1617
SatI GCNGC 6 cut(s) 62, 1020, 1023, 1083, 1109, 1165
Sau96I GGNCC 1 cut(s) 1110
SchI GAGTC 2 cut(s) 605, 1254
ScrFI CCNGG 3 cut(s) 810, 868, 1478
SduI GDGCHC 3 cut(s) 741, 855, 876
SfaNI GCATC 2 cut(s) 599, 1056
Sfr274I CTCGAG 1 cut(s) 732
SfuI TTCGAA 1 cut(s) 901
SlaI CTCGAG 1 cut(s) 732
SmiMI CAYNNNNRTG 1 cut(s) 29
SmlI CTYRAG 3 cut(s) 732, 1246, 1262
SmoI CTYRAG 3 cut(s) 732, 1246, 1262
SpeI ACTAGT 1 cut(s) 1004
Sse9I AATT 7 cut(s) 356, 516, 831, 914, 922, 1448, 1590
SseBI AGGCCT 2 cut(s) 1268, 1468
SsiI CCGC 7 cut(s) 57, 62, 86, 192, 221, 510, 1108
SspMI CTAG 2 cut(s) 429, 1005
StuI AGGCCT 2 cut(s) 1268, 1468
StyD4I CCNGG 3 cut(s) 808, 866, 1476
StyI CCWWGG 1 cut(s) 887
TaaI ACNGT 2 cut(s) 19, 118
TaiI ACGT 1 cut(s) 1437
TaqI TCGA 6 cut(s) 212, 733, 901, 1097, 1302, 1318
TasI AATT 7 cut(s) 356, 516, 831, 914, 922, 1448, 1590
TatI WGTACW 2 cut(s) 1036, 1150
TauI GCSGC 2 cut(s) 64, 1111
TfiI GAWTC 4 cut(s) 605, 1088, 1207, 1542
Tru1I TTAA 5 cut(s) 198, 272, 657, 1332, 1617
Tru9I TTAA 5 cut(s) 198, 272, 657, 1332, 1617
TscAI CASTG 1 cut(s) 1225
TseFI GTSAC 1 cut(s) 112
TseI GCWGC 4 cut(s) 1019, 1022, 1082, 1164
Tsp45I GTSAC 1 cut(s) 112
TspDTI ATGAA 8 cut(s) 582, 705, 774, 793, 916, 1091, 1220, 1288
TspGWI ACGGA 4 cut(s) 216, 496, 783, 1490
TspRI CASTG 1 cut(s) 1225
VneI GTGCAC 1 cut(s) 851
XceI RCATGY 1 cut(s) 1361
XhoI CTCGAG 1 cut(s) 732
XmnI GAANNNNTTC 1 cut(s) 712
XspI CTAG 2 cut(s) 429, 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.