pycom13g11170

disease resistance

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr13
Physical Location & Seq
Reverse (-)
7623388 .. 7629171
5784 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom13g11170.5

Sequence Viewer

Length: 4623 bp
ATGGCTCTGGCAGTGGTTTCCTTTGTGGTTGCAAGGCTTGGAGACTTAATCATTCAAGAAGCGAAGTTCTTGCATGGAGTCAGCGATCAAGTTGAGGTTGCACGAACTGAGCTACAATTAGTGCAGGGTTTTCTGAAAGATGCAGATGTAAGGCAACGAGATGATGAAACGGTACATATTCTGGTCACGAAAATTAGAAATGCTGCTTATGATTTGGAGGATATCATAGAAACTTTTGTCCTCGAAGTGGCCTCGAAGAGGGAAGGAGGTATTAAGAACGTTCTGAAAAGGTTTGGTCGTGTGCTGAAGGAAGGAATTTCCAATTTCAGGTCAAGCTTGCAAACCCATAACATCATGGAAATAAGGGACTTTAGAGGAGCCACTTCTTTGTATGAGAGGCAACAACAACTTAGAAGAAGCTATTCTCATATTATTAATCGTGATGTTGTCGGGTTAGTAGCTGACGTACGAGAATTGGTCATGCATTTGGTGAAGAAAGAGCCCAGACACCAAGCTGTTTCTATCTGGGGAATGGGCGGTTTGGGAAAGACAACTCTTGCAAAACAGATTTATCGTCACAATGAAGTTAGACGCCATTTTGGCAGCTTTGTTTGGGTATGTATCTCTCAACAAAGTCAAGTAAGAGATGTTTGGGAAGAACTTTTAATTAAACTCCTTTCTGCTACCACCGTGCAAAGAGAAGAAATTGCAAAAATGAAAGATGATGAAATAGCCAAGAGAATTTATCTTCTACAGCAAGAAAGTAGATGCTTGGTTGTCATCGATGATATTTGGAGCATCGAGACATGGGAGTCTTTGAAAGCTGCATTTCCACTAAATCAGAGAACAGAAAGCAGAATATTACTCACAACTCGAGTCAAGGAAGTAGCTTTGCATGCAGCAGATAGGAATGGTATCCTCCACCAACCTCGGCCATTAAACGAAGATGAAAGTTGGGAACTATTGGAGAAGATAGCAATCTTCGGAAGAGAAGAAATAACCTCGGAAGTTTTCGGAAAGATGAAAGAAATAGGAAAGAAGATGCTTCAACATTGTGCCGGTTTGCCATTAGCTGTCATTGTGCTCGCAGGACTCCTTGCTAGAAAGGATACAATTGAAGAGTGGGATACAGTGCTTAACAATGTTTATGCATACATAAGAAGAGGCAAGGGCCATGAACAAGAATGCATGGGTACTTTGTGGGTGTTGTCATTGAGTTATGATAACTTACCCTATCACTTAAAATCATGCTTTTTGTATTTAGGCATTTTCCCTGAAGATTTTGAGATACCAGTGAAAAGATTGACTCAACTGTGGATGGCAGAAGGTTTTATATCTATGCCACTACAACAAACACAAGGTTTAGTAGAAACAATGGAGGAGATAGCATACAACTACTTAAATGAACTGGTGGACAGGTGTGTGGTTCAAATTGGGGAACGGGGTTCTGTTAGAAAGATCAAGTCTTGTCGTCTTCATCGATCTTATGCGAGACTTGTGTTTGATAAAGTCAGAAGAGGAGGGCTTTCTCCAAACTTTCAAATCATTGCAATACCAACGGGTAAGGTTCGACGACTTGCCATCTGCTTGGATGAAAACGTTGATAAATTAGTTCCATCAAGTTATGCAAGAGATGACCGTCTCAGGTCACTTTTATACTTTTGCCCATTAGATTGGCATCCAAACAATAAAAAGCTAGTATCATCACTGTTTAAGGACTTCAAATTGCTCAGAGTTTTGAAGGTTGAAGGTATGACTGCATTAGTAGACTTGCCAAATGAAATTGGGAATATGGTCCACCTGAGATTCTTAAGTCTAAGATATAGTCATATAAAACGGTTGCCATCTTCCCTGGGCAATTTGATACTTTTGCAAACTCTGAATCTTCGCTTTCATCATGACTCGGATATGTTACCAAATGTATTTTGGAAGATGGTGCAACTGAGGCATTTGTATTTACCCTTGTATTACACCGCACGTGGTAATAGACTACAGCTATCTACCCTTCACAATTTGCAGACTTTAAATTATGTTTCGAGTCGCTGTTGTGAGTTGAATGATCTTGCTGGGTTAACCAGTCTCAGAAAACTGGCCATAGAATTGGCAAGCCCCTTGAAAAATTTGGAGGAAACCTTGAAAGGTATAAGCAGCACACTCAATGGCATTCGATCTCTATTTGTGCACAACTTACTTGGAACTGACAGTGGCACGGAGGTAACACAAATAGTTTTGAGTTGTCGTCATGTGTACAAGCTGGAATTGAATGGTCGAACAGTAGAGTTACCTGGAGACCTTCAGCACTTTCCAAACCTCACTAAGTTATCTCTGTGCCGGTGTGATCTCAACCACAACCAAATGGCGGTACTAGCGAAGTTGCCAAATTTGAAAATCCTATGCCTGATGGAAGAAACTTTTGAGAGTTCAATTTCAGACACACTGGTTTTCTCCAACGAAGGCTTTCGTCATCTTGAATGTCTTTCCCTTACTTGTATGCATGAGTTAAAGGACTTGAAGGTGGAAAGAGGAGCCATGCCGAGCCTCCGCCGATTGTTCATACGAGCTTGCTACAGATTGACCGAAGTTCCAAACGGGCTGAGGTATCTTACTACGCTCAGGGAGTTAAGCTTCGTAGCGATGTCTACGACATTTCGTAACAGGCTTCAGGTAGGGGGAGAGGATTTCGATAAAGTCCAACACGTGCCTTCCGTTGTATTTGCCAACATGATGGACAGTTCTGAGATTGCGGAAATCCTATCATTGATTGGACGACTTTCTGACCAACACACTCGAGGTATTTCATACATACATAAAATTGAAGAGTGGGATACAGTGCTTAAAAATGTTTATACATACATAAGAAGAGGCAAAGGCCATGAACAAGAATGCACGGGTACAATGTGGGTGTTGTCATTGAGTTATGATAACTTACCCTATCACTTAAAATCATGCTTTTTGTATTTAGGCATTTTCCCAGAAGATTTTGAGATACCAGTGAAAAGATTGACTCAACTGTGGATGGCAGAAGGTTTTATATCTATGCCACTACAACAAAGACAAGGTTTAGTAGAAACAATGGAGGACATAGCATACAACTACTTAAATGAACTGGTGGACAGGTGTGTGGTTCAAATTGGGGAACGGGGTTCTGTTAGAAAGATCAAGTCTTGTCGTCTTCATGATCTTATGCGAGACTTGTGTTTGATAAAGTCAGAAGAGGAGGGCTTTCTCCAAAATGTCAAATCATTGCACAGAAGTGAGACTATGTATTCTTCTCCTCCTCTGACGATAGCCAAGGCAATACCAGCGGGTAAGGTTCGAAGACTTGCCATCTGCTTGGATGAAAATGTTGATAAATTAGTTCCATCAAGTTATGAAAGAGATGACCGTCTCAGGTCTCTTTTATACTTTGGCCGATTACATTGCCATCCAGAAAATAAAAAGCTAGTATCATCACTGTTTAAGGACTTCAAATTGCTCAGAGTTTTGAAGGTTGAAGGTATGACTGCATTAGTAGACTTGCCAAATGAAATTGGGAATATGGTCCACTTGAGATTCTTAAGTCTAAGAGATAGTCATATAAAACGGTTGCCATCTTCCCTGGGCAATTTGATACTTTTGCAAACTTTGGATCTTCGCTTTCGTTATGTCCTGGATATGTTACCATATGTATTTTGGAAGATGGTGCAACTGAGGCATTTGTATTTACCCGTGTATTACACCGCACGTGGTAATAGACTACACCTATCTACTCTTCACAATTTGCAGACTTTAAATTATGTTTCGAGTCGCTGTTGTGAGTTGAATGATCTTGCTGGGTTAACCGGTCTCAGAAAACTGGTCATAGAATTGGCAAGCCCCTTGAAAAATTTGGAGGAAACCTTGAAAGGTATAAGCAGCACACTCAATGGCATTCGATCTCTATTTGTGCACAACTTACTTAGAACTGATAGTGGCACGGAGGTAACACAAATAGTATTGAGTTGTCGTCATGTGTACAAGCTGGAATTGAATGGTCGAACAGTAGAGTTACCTGGAGACCTTCAGCACTTTCCAAACCTCACTAAGTTATCTCTGTGCCGGTGTGATCTCAACCACAACCAAATGGCGGTACTAGCGAAGTTGCCAAATTTGAAAATCCTACGCCTAATGGAAGGAACTTTTGAGAGTTCAATTTCAGACACACTGGTTTTCTCCAACGAAGGCTTTCGTCATCTTGAATGTCTTTCCCTTATTTGTATGTATGAGTTAAAGGACTTGAAGGTGGAAAGAGGAGCCATGCCGAGCCTCCGCCAATTGTTCATACGAGCTTGCGACAGATTGACCGAAGTTCCAAACGGGCTGAGGTATCTTACTACGCTCAGGGAGTTAAGCTTCGTAGCGATGTCCACGACATTTCGTAACAGGCTTCAGGTAGGAGGAGAGGATTTCGATAAAGTCCAACACGTGCCTTCCGTTGTATTTGCCGACATGATGGACAGGTACTTCTTGAATTTGAAAATCTCGAGGTTACTTCTTGTATTCATATCGATCTTCTTTAAATTTTTACTGTTATTCTTCATTGTTGGTTCTCTGTTTTTTGCTGTTTTTCTACTTCATGTTCATGCTCCTACTCTGACAGTCTGA

Protein Analysis

1541

Amino Acids

177.15

Weight (kDa)

8.88

Isoelectric Point (pI)

49.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 811
AccI GTMKAC 3 cut(s) 1767, 2639, 3513
AciI CCGC 9 cut(s) 537, 1974, 2360, 2542, 2744, 3305, 3720, 4106, 4288
AclI AACGTT 2 cut(s) 279, 1599
AclWI GGATC 1 cut(s) 3636
AcoI YGGCCR 3 cut(s) 932, 2091, 3409
AcsI RAATTY 8 cut(s) 315, 741, 2119, 2380, 3865, 4126, 4489, 4538
AcuI CTGAAG 6 cut(s) 326, 1296, 2279, 2645, 4025, 4391
AcvI CACGTG 4 cut(s) 1979, 2698, 3725, 4444
AcyI GRCGYC 1 cut(s) 592
AfaI GTAC 9 cut(s) 174, 468, 1195, 2249, 2364, 2893, 3995, 4110, 4481
AfiI CCNNNNNNNGG 5 cut(s) 247, 258, 327, 2359, 4105
AflII CTTAAG 2 cut(s) 1810, 3556
AflIII ACRYGT 2 cut(s) 2695, 4441
AgeI ACCGGT 1 cut(s) 3821
AjnI CCWGG 5 cut(s) 1851, 2284, 3597, 3648, 4030
AleI CACNNNNGTG 1 cut(s) 3252
Alw21I GWGCWC 3 cut(s) 1086, 2184, 3930
Alw44I GTGCAC 2 cut(s) 2180, 3926
AlwI GGATC 1 cut(s) 3636
Ama87I CYCGRG 3 cut(s) 873, 2787, 4501
AoxI GGCC 6 cut(s) 249, 932, 1171, 2091, 2869, 3409
ApaLI GTGCAC 2 cut(s) 2180, 3926
ApeKI GCWGC 6 cut(s) 203, 603, 824, 899, 2148, 3894
ApoI RAATTY 8 cut(s) 315, 741, 2119, 2380, 3865, 4126, 4489, 4538
AseI ATTAAT 1 cut(s) 435
AsiGI ACCGGT 1 cut(s) 3821
Asp700I GAANNNNTTC 3 cut(s) 421, 2457, 4203
AspS9I GGNCC 3 cut(s) 1171, 1795, 3541
AsuHPI GGTGA 1 cut(s) 502
AsuII TTCGAA 1 cut(s) 3316
AvaI CYCGRG 3 cut(s) 873, 2787, 4501
AvaII GGWCC 2 cut(s) 1795, 3541
BaeGI GKGCMC 2 cut(s) 2184, 3930
BalI TGGCCA 1 cut(s) 2093
BanII GRGCYC 1 cut(s) 504
BbrPI CACGTG 4 cut(s) 1979, 2698, 3725, 4444
BbsI GAAGAC 3 cut(s) 1466, 3164, 3325
Bbv12I GWGCWC 3 cut(s) 1086, 2184, 3930
BbvCI CCTCAGC 2 cut(s) 2594, 4340
BbvI GCAGC 6 cut(s) 190, 615, 811, 911, 2160, 3906
BcgI CGANNNNNNTGC 4 cut(s) 52, 86, 3402, 3436
BciT130I CCWGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
BciVI GTATCC 4 cut(s) 926, 1102, 1120, 2818
BfaI CTAG 5 cut(s) 1101, 1697, 2366, 3443, 4112
BfmI CTRYAG 3 cut(s) 752, 1991, 2566
BfrI CTTAAG 2 cut(s) 1810, 3556
BfuI GTATCC 4 cut(s) 926, 1102, 1120, 2818
BglI GCCNNNNNGGC 1 cut(s) 600
BisI GCNGC 6 cut(s) 204, 604, 825, 900, 2149, 3895
BlsI GCNGC 6 cut(s) 205, 605, 826, 901, 2150, 3896
Bme1390I CCNGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
Bme18I GGWCC 2 cut(s) 1795, 3541
BmeT110I CYCGRG 3 cut(s) 873, 2787, 4501
BmgT120I GGNCC 3 cut(s) 1171, 1795, 3541
BmiI GGNNCC 3 cut(s) 379, 2527, 4273
BmrFI CCNGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
BmsI GCATC 5 cut(s) 130, 758, 807, 1032, 1687
BpiI GAAGAC 3 cut(s) 1466, 3164, 3325
BpmI CTGGAG 2 cut(s) 2307, 4053
Bpu10I CCTNAGC 4 cut(s) 2594, 2612, 4340, 4358
Bpu14I TTCGAA 1 cut(s) 3316
BpuEI CTTGAG 1 cut(s) 3568
Bsa29I ATCGAT 3 cut(s) 783, 1480, 4526
BsaAI YACGTR 4 cut(s) 1979, 2698, 3725, 4444
BsaBI GATNNNNATC 2 cut(s) 977, 1677
BsaHI GRCGYC 1 cut(s) 592
BsaI GGTCTC 4 cut(s) 2283, 3399, 3830, 4029
BsaJI CCNNGG 7 cut(s) 929, 1002, 1851, 1852, 3291, 3597, 3598
BsaWI WCCGGW 1 cut(s) 3821
Bsc4I CCNNNNNNNGG 5 cut(s) 247, 258, 327, 2359, 4105
Bse118I RCCGGY 4 cut(s) 1058, 2331, 3821, 4077
Bse1I ACTGG 9 cut(s) 1292, 1413, 2076, 2094, 2442, 2990, 3111, 3840, 4188
Bse3DI GCAATG 3 cut(s) 1545, 3242, 3418
Bse8I GATNNNNATC 2 cut(s) 977, 1677
BseBI CCWGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
BseCI ATCGAT 3 cut(s) 783, 1480, 4526
BseDI CCNNGG 7 cut(s) 929, 1002, 1851, 1852, 3291, 3597, 3598
BseGI GGATG 6 cut(s) 1323, 1597, 1678, 3021, 3343, 3424
BseJI GATNNNNATC 2 cut(s) 977, 1677
BseLI CCNNNNNNNGG 5 cut(s) 247, 258, 327, 2359, 4105
BseMI GCAATG 3 cut(s) 1545, 3242, 3418
BseNI ACTGG 9 cut(s) 1292, 1413, 2076, 2094, 2442, 2990, 3111, 3840, 4188
BseRI GAGGAG 9 cut(s) 390, 1394, 1533, 2538, 3230, 3264, 3267, 4284, 4431
BseSI GKGCMC 2 cut(s) 2184, 3930
BseXI GCAGC 6 cut(s) 190, 615, 811, 911, 2160, 3906
BseYI CCCAGC 2 cut(s) 2066, 3812
BsgI GTGCAG 1 cut(s) 143
BshFI GGCC 6 cut(s) 251, 934, 1173, 2093, 2871, 3411
BshTI ACCGGT 1 cut(s) 3821
BshVI ATCGAT 3 cut(s) 783, 1480, 4526
BsiHKAI GWGCWC 3 cut(s) 1086, 2184, 3930
BsiHKCI CYCGRG 3 cut(s) 873, 2787, 4501
BsiSI CCGG 4 cut(s) 1059, 2332, 3822, 4078
BsiWI CGTACG 1 cut(s) 466
BslFI GGGAC 1 cut(s) 380
BslI CCNNNNNNNGG 5 cut(s) 247, 258, 327, 2359, 4105
BsmBI CGTCTC 2 cut(s) 1646, 3392
BsmFI GGGAC 1 cut(s) 380
BsmI GAATGC 4 cut(s) 1190, 2163, 2888, 3909
BsnI GGCC 6 cut(s) 251, 934, 1173, 2093, 2871, 3411
Bso31I GGTCTC 4 cut(s) 2283, 3399, 3830, 4029
BsoBI CYCGRG 3 cut(s) 873, 2787, 4501
Bsp119I TTCGAA 1 cut(s) 3316
Bsp1286I GDGCHC 4 cut(s) 504, 1086, 2184, 3930
Bsp1407I TGTACA 2 cut(s) 2247, 3993
BspACI CCGC 9 cut(s) 537, 1974, 2360, 2542, 2744, 3305, 3720, 4106, 4288
BspANI GGCC 6 cut(s) 251, 934, 1173, 2093, 2871, 3411
BspDI ATCGAT 3 cut(s) 783, 1480, 4526
BspHI TCATGA 2 cut(s) 1897, 3175
BspLI GGNNCC 3 cut(s) 379, 2527, 4273
BspPI GGATC 1 cut(s) 3636
BspT104I TTCGAA 1 cut(s) 3316
BspTI CTTAAG 2 cut(s) 1810, 3556
BspTNI GGTCTC 4 cut(s) 2283, 3399, 3830, 4029
BsrDI GCAATG 3 cut(s) 1545, 3242, 3418
BsrFI RCCGGY 4 cut(s) 1058, 2331, 3821, 4077
BsrGI TGTACA 2 cut(s) 2247, 3993
BsrI ACTGG 9 cut(s) 1292, 1413, 2076, 2094, 2442, 2990, 3111, 3840, 4188
BssAI RCCGGY 4 cut(s) 1058, 2331, 3821, 4077
BssECI CCNNGG 7 cut(s) 929, 1002, 1851, 1852, 3291, 3597, 3598
BssNI GRCGYC 1 cut(s) 592
BssT1I CCWWGG 1 cut(s) 3291
Bst2UI CCWGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
Bst6I CTCTTC 9 cut(s) 251, 982, 1113, 1156, 1510, 2811, 2854, 3207, 3756
BstACI GRCGYC 1 cut(s) 592
BstAFI CTTAAG 2 cut(s) 1810, 3556
BstAUI TGTACA 2 cut(s) 2247, 3993
BstBAI YACGTR 4 cut(s) 1979, 2698, 3725, 4444
BstBI TTCGAA 1 cut(s) 3316
BstC8I GCNNGC 7 cut(s) 338, 897, 1086, 2107, 2563, 3853, 4309
BstENI CCTNNNNNAGG 1 cut(s) 256
BstF5I GGATG 6 cut(s) 1323, 1597, 1678, 3021, 3343, 3424
BstMWI GCNNNNNNNGC 7 cut(s) 600, 896, 1945, 2366, 3302, 3691, 4112
BstNI CCWGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
BstNSI RCATGY 1 cut(s) 899
BstSCI CCNGG 5 cut(s) 1851, 2284, 3597, 3648, 4030
BstSFI CTRYAG 3 cut(s) 752, 1991, 2566
BstSLI GKGCMC 2 cut(s) 2184, 3930
BstV1I GCAGC 6 cut(s) 190, 615, 811, 911, 2160, 3906
BstV2I GAAGAC 3 cut(s) 1466, 3164, 3325
BstX2I RGATCY 1 cut(s) 3628
BstXI CCANNNNNNTGG 5 cut(s) 1588, 1674, 2101, 2725, 3334
BstYI RGATCY 1 cut(s) 3628
Bsu15I ATCGAT 3 cut(s) 783, 1480, 4526
BsuI GTATCC 4 cut(s) 926, 1102, 1120, 2818
BsuRI GGCC 6 cut(s) 251, 934, 1173, 2093, 2871, 3411
BsuTUI ATCGAT 3 cut(s) 783, 1480, 4526
BtgZI GCGATG 2 cut(s) 2648, 4394
BtsCI GGATG 6 cut(s) 1323, 1597, 1678, 3021, 3343, 3424
BtsI GCAGTG 1 cut(s) 18
Cac8I GCNNGC 7 cut(s) 338, 897, 1086, 2107, 2563, 3853, 4309
CciI TCATGA 2 cut(s) 1897, 3175
Cfr10I RCCGGY 4 cut(s) 1058, 2331, 3821, 4077
Cfr13I GGNCC 3 cut(s) 1171, 1795, 3541
ClaI ATCGAT 3 cut(s) 783, 1480, 4526
CseI GACGC 1 cut(s) 600
Csp6I GTAC 9 cut(s) 173, 467, 1194, 2248, 2363, 2892, 3994, 4109, 4480
CspAI ACCGGT 1 cut(s) 3821
CviQI GTAC 9 cut(s) 173, 467, 1194, 2248, 2363, 2892, 3994, 4109, 4480
DraI TTTAAA 3 cut(s) 2025, 3771, 4537
DrdI GACNNNNNNGTC 1 cut(s) 811
DseDI GACNNNNNNGTC 1 cut(s) 811
EaeI YGGCCR 3 cut(s) 932, 2091, 3409
Eam1104I CTCTTC 9 cut(s) 251, 982, 1113, 1156, 1510, 2811, 2854, 3207, 3756
EarI CTCTTC 9 cut(s) 251, 982, 1113, 1156, 1510, 2811, 2854, 3207, 3756
EciI GGCGGA 2 cut(s) 2531, 4277
Eco130I CCWWGG 1 cut(s) 3291
Eco24I GRGCYC 1 cut(s) 504
Eco31I GGTCTC 4 cut(s) 2283, 3399, 3830, 4029
Eco32I GATATC 1 cut(s) 223
Eco47I GGWCC 2 cut(s) 1795, 3541
Eco57I CTGAAG 6 cut(s) 326, 1296, 2279, 2645, 4025, 4391
Eco72I CACGTG 4 cut(s) 1979, 2698, 3725, 4444
Eco88I CYCGRG 3 cut(s) 873, 2787, 4501
EcoNI CCTNNNNNAGG 1 cut(s) 256
EcoRII CCWGG 5 cut(s) 1851, 2284, 3597, 3648, 4030
EcoRV GATATC 1 cut(s) 223
EcoT14I CCWWGG 1 cut(s) 3291
EcoT22I ATGCAT 4 cut(s) 486, 1153, 1190, 2496
EcoT38I GRGCYC 1 cut(s) 504
ErhI CCWWGG 1 cut(s) 3291
Esp3I CGTCTC 2 cut(s) 1646, 3392
FaqI GGGAC 1 cut(s) 380
FauI CCCGC 1 cut(s) 3298
FauNDI CATATG 1 cut(s) 3664
FblI GTMKAC 3 cut(s) 1767, 2639, 3513
Fnu4HI GCNGC 6 cut(s) 204, 604, 825, 900, 2149, 3895
FokI GGATG 6 cut(s) 1330, 1604, 1665, 3028, 3350, 3411
FriOI GRGCYC 1 cut(s) 504
Fsp4HI GCNGC 6 cut(s) 204, 604, 825, 900, 2149, 3895
FspBI CTAG 5 cut(s) 1101, 1697, 2366, 3443, 4112
GluI GCNGC 6 cut(s) 204, 604, 825, 900, 2149, 3895
GsaI CCCAGC 2 cut(s) 2070, 3816
GsuI CTGGAG 2 cut(s) 2307, 4053
HaeIII GGCC 6 cut(s) 251, 934, 1173, 2093, 2871, 3411
HapII CCGG 4 cut(s) 1059, 2332, 3822, 4078
HgaI GACGC 1 cut(s) 600
Hin1I GRCGYC 1 cut(s) 592
HincII GTYRAC 2 cut(s) 2073, 3819
HindII GTYRAC 2 cut(s) 2073, 3819
HindIII AAGCTT 3 cut(s) 334, 2623, 4369
HpaI GTTAAC 2 cut(s) 2073, 3819
HpaII CCGG 4 cut(s) 1059, 2332, 3822, 4078
HphI GGTGA 1 cut(s) 502
Hpy99I CGWCG 1 cut(s) 1575
HpyCH4IV ACGT 7 cut(s) 279, 465, 1599, 1978, 2697, 3724, 4443
HpyF10VI GCNNNNNNNGC 7 cut(s) 600, 896, 1945, 2366, 3302, 3691, 4112
HpySE526I ACGT 7 cut(s) 279, 465, 1599, 1978, 2697, 3724, 4443
Hsp92I GRCGYC 1 cut(s) 592
KspAI GTTAAC 2 cut(s) 2073, 3819
LmnI GCTCC 5 cut(s) 377, 795, 2525, 4271, 4609
Lsp1109I GCAGC 6 cut(s) 190, 615, 811, 911, 2160, 3906
LweI GCATC 5 cut(s) 130, 758, 807, 1032, 1687
MaeI CTAG 5 cut(s) 1101, 1697, 2366, 3443, 4112
MaeII ACGT 7 cut(s) 279, 465, 1599, 1978, 2697, 3724, 4443
MfeI CAATTG 2 cut(s) 1113, 4292
MflI RGATCY 1 cut(s) 3628
MhlI GDGCHC 4 cut(s) 504, 1086, 2184, 3930
MlsI TGGCCA 1 cut(s) 2093
MluNI TGGCCA 1 cut(s) 2093
MlyI GAGTC 9 cut(s) 87, 821, 885, 1086, 1300, 1895, 2047, 2998, 3793
MmeI TCCRAC 4 cut(s) 2472, 2716, 4218, 4462
Mox20I TGGCCA 1 cut(s) 2093
Mph1103I ATGCAT 4 cut(s) 486, 1153, 1190, 2496
MroXI GAANNNNTTC 3 cut(s) 421, 2457, 4203
MscI TGGCCA 1 cut(s) 2093
MslI CAYNNNNRTG 2 cut(s) 3252, 4599
Msp20I TGGCCA 1 cut(s) 2093
MspA1I CMGCKG 1 cut(s) 3305
MspCI CTTAAG 2 cut(s) 1810, 3556
MspI CCGG 4 cut(s) 1059, 2332, 3822, 4078
MspR9I CCNGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
MunI CAATTG 2 cut(s) 1113, 4292
Mva1269I GAATGC 4 cut(s) 1190, 2163, 2888, 3909
MvaI CCWGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
MwoI GCNNNNNNNGC 7 cut(s) 600, 896, 1945, 2366, 3302, 3691, 4112
NdeI CATATG 1 cut(s) 3664
NlaIV GGNNCC 3 cut(s) 379, 2527, 4273
NmeAIII GCCGAG 3 cut(s) 910, 2559, 4305
NmuCI GTSAC 3 cut(s) 184, 575, 1647
NsiI ATGCAT 4 cut(s) 486, 1153, 1190, 2496
NspI RCATGY 1 cut(s) 899
NspV TTCGAA 1 cut(s) 3316
OliI CACNNNNGTG 1 cut(s) 3252
PacI TTAATTAA 1 cut(s) 669
PaeI GCATGC 1 cut(s) 899
PaeR7I CTCGAG 3 cut(s) 873, 2787, 4501
PagI TCATGA 2 cut(s) 1897, 3175
PasI CCCWGGG 2 cut(s) 1852, 3598
PcsI WCGNNNNNNNCGW 3 cut(s) 1477, 2703, 4449
PctI GAATGC 4 cut(s) 1190, 2163, 2888, 3909
PdmI GAANNNNTTC 3 cut(s) 421, 2457, 4203
PfeI GAWTC 3 cut(s) 1806, 1882, 3552
Pfl23II CGTACG 1 cut(s) 466
PfoI TCCNGGA 1 cut(s) 3648
PinAI ACCGGT 1 cut(s) 3821
PkrI GCNGC 6 cut(s) 205, 605, 826, 901, 2150, 3896
PleI GAGTC 9 cut(s) 86, 820, 884, 1086, 1300, 1895, 2046, 2998, 3792
PmaCI CACGTG 4 cut(s) 1979, 2698, 3725, 4444
PmlI CACGTG 4 cut(s) 1979, 2698, 3725, 4444
PpsI GAGTC 9 cut(s) 86, 820, 884, 1086, 1300, 1895, 2046, 2998, 3792
Ppu21I YACGTR 4 cut(s) 1979, 2698, 3725, 4444
PshBI ATTAAT 1 cut(s) 435
Psp1406I AACGTT 2 cut(s) 279, 1599
Psp6I CCWGG 5 cut(s) 1851, 2284, 3597, 3648, 4030
PspCI CACGTG 4 cut(s) 1979, 2698, 3725, 4444
PspFI CCCAGC 2 cut(s) 2066, 3812
PspGI CCWGG 5 cut(s) 1851, 2284, 3597, 3648, 4030
PspLI CGTACG 1 cut(s) 466
PspN4I GGNNCC 3 cut(s) 379, 2527, 4273
PspPI GGNCC 3 cut(s) 1171, 1795, 3541
PspXI VCTCGAGB 2 cut(s) 873, 2787
PsuI RGATCY 1 cut(s) 3628
RsaI GTAC 9 cut(s) 174, 468, 1195, 2249, 2364, 2893, 3995, 4110, 4481
RsaNI GTAC 9 cut(s) 173, 467, 1194, 2248, 2363, 2892, 3994, 4109, 4480
RseI CAYNNNNRTG 2 cut(s) 3252, 4599
SatI GCNGC 6 cut(s) 204, 604, 825, 900, 2149, 3895
Sau96I GGNCC 3 cut(s) 1171, 1795, 3541
SchI GAGTC 9 cut(s) 87, 821, 885, 1086, 1300, 1895, 2047, 2998, 3793
ScrFI CCNGG 5 cut(s) 1853, 2286, 3599, 3650, 4032
SduI GDGCHC 4 cut(s) 504, 1086, 2184, 3930
SfaNI GCATC 5 cut(s) 130, 758, 807, 1032, 1687
SfcI CTRYAG 3 cut(s) 752, 1991, 2566
Sfr274I CTCGAG 3 cut(s) 873, 2787, 4501
SfuI TTCGAA 1 cut(s) 3316
SinI GGWCC 2 cut(s) 1795, 3541
SlaI CTCGAG 3 cut(s) 873, 2787, 4501
SmiMI CAYNNNNRTG 2 cut(s) 3252, 4599
SmlI CTYRAG 6 cut(s) 873, 1810, 2787, 3547, 3556, 4501
SmoI CTYRAG 6 cut(s) 873, 1810, 2787, 3547, 3556, 4501
SphI GCATGC 1 cut(s) 899
SsiI CCGC 9 cut(s) 537, 1974, 2360, 2542, 2744, 3305, 3720, 4106, 4288
SspI AATATT 1 cut(s) 861
SspMI CTAG 5 cut(s) 1101, 1697, 2366, 3443, 4112
StyD4I CCNGG 5 cut(s) 1851, 2284, 3597, 3648, 4030
StyI CCWWGG 1 cut(s) 3291
TaiI ACGT 7 cut(s) 282, 468, 1602, 1981, 2700, 3727, 4446
TaqII GACCGA 2 cut(s) 2591, 4337
TatI WGTACW 2 cut(s) 2247, 3993
TfiI GAWTC 3 cut(s) 1806, 1882, 3552
TseFI GTSAC 3 cut(s) 184, 575, 1647
TseI GCWGC 6 cut(s) 203, 603, 824, 899, 2148, 3894
Tsp45I GTSAC 3 cut(s) 184, 575, 1647
TspGWI ACGGA 4 cut(s) 2225, 2695, 3971, 4441
Vha464I CTTAAG 2 cut(s) 1810, 3556
VneI GTGCAC 2 cut(s) 2180, 3926
VpaK11BI GGWCC 2 cut(s) 1795, 3541
VspI ATTAAT 1 cut(s) 435
XagI CCTNNNNNAGG 1 cut(s) 256
XapI RAATTY 8 cut(s) 315, 741, 2119, 2380, 3865, 4126, 4489, 4538
XceI RCATGY 1 cut(s) 899
XcmI CCANNNNNNNNNTGG 2 cut(s) 1923, 3669
XhoI CTCGAG 3 cut(s) 873, 2787, 4501
XmiI GTMKAC 3 cut(s) 1767, 2639, 3513
XmnI GAANNNNTTC 3 cut(s) 421, 2457, 4203
XspI CTAG 5 cut(s) 1101, 1697, 2366, 3443, 4112
Zsp2I ATGCAT 4 cut(s) 486, 1153, 1190, 2496
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.