Prupe.1G047700_v2.0.a1

disease resistance

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
3369783 .. 3374630
4848 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G047700.1

Sequence Viewer

Length: 2808 bp
ATGGCTGAGGCAGTTGTTTCCGTTGTGCTCGAAAGTGTCAGAGACTTCACCATTCAGGAAGCCAAGTTCTTGTCTGGTGTCAGCCGTCAAGTTGAAGCTGCACAAACTGAGCTAGAATTCATGCAGGGATTCCTCAAAGATGCAGATGCAAGACAAGGACAAGATACAGGAGTCCGTATTTGTGTTGCCAAAATTAGAGATGCGGCTTATGATTTGGAAGATATTATTGAAACTTATGGCTTGAAAGTGGATTCCAAGAAGAAGAAAAGAGGCCTCAAGAATGTTCTCAAAAGATTTGCCTGCATCTTCAAGGAAGGGGTTGATGTTCACATGATTGCGGCAGAAATTGAGAATATCACTACCAAAATTTCGGCGTTGAGATCGAATTTGCAGAGTTATAACATAAAGGAAATAAGGGACAGGGACAGCGGTGGTGGTGAATCTTCCTTGCAATTGCATGAAAGGCTAAGGAGAAGTTATTCTCATGTTGTTGAACGTGATGTTGTTGGGTTAGAGTCCAACGTTGAAGAATTGGTTATGCATTTGGTGAAAGATGAAAACCGTCATCAAGTTGTATCTGTTTGGGGTATGGGCGGTTTAGGGAAGACCACCCTTGCAAGAAAGGTTTATCATCACAAAAAAGTAAGGCAGCATTTTCATAGTTTTGCTTGGGTCTGTGTATCTCAACGTTTTCAAGTCAGAAATGTTTGGGAAAGAATTTTAATTGAACTCACTTCTGCTACCAAGGAACCAAAACAAGAAATTAAGGACATGACAGATGATGAAATAGCAAAGAAGCTTTTCCTTTTTTTGCAAGAAATGAGATGTTTGGTTATCCTTGATGACATATGGAGAACCGAGGCATGGAATCTTTTGGAAATTGCATTTCCAAACGTGGAAACAGAGAGCACAATATTGCTTACTACACGCAATCAAGCAGTAGCTTCGCTCCCAAATAGAAATGCTTATCGCCACCAACTCCAGCCACTCAATGAGAATGAGAGTTGGGAACTACTTGAGAAGAAAACAATATCTGAAAATGCTGATATCGATTTGGGAATGTACACAAAGAAGAGAGAATTAGGAATGGATATGCTTCGATATTGTAAAGGTTTGCCATTAGCCATTATTGTGCTTGCCGGAGTTCTAGCAAGAAAAAACACTGTTAGAGAGTGGGAGAGAGTGCATGAGAATGTTCGTGAATACATAAGGAAAGGGACAGGTCATGAAGAGGAATTTAAAGGTGCATCATGGGTTTTGGCATTGAGTTATGATGACCTACCGTATTACTTAAAACCATGTTTTTTATATTTAGGTCATTATCCTGAAGATTGTATTATTTCGGTAAGCACATTGACTAAGTTTTGGGTGGCAGAAGGTCTTATCTTCTCGAGACAACAAAGACATAGTTTGGGGAAAACAATGGAGGATATAGCACGTGATTGGTTAAGTGAGTTGGTAGAAAGGTGTTTGGTTCAAGTGGGAACAAGTGGTTCAACTGGGACAATTAAAAGTTGCCGAATCCATGATCTTGTACGAGACATGTGTTTGTTAAGGGCAAAGGAGGAAAGTTTTCTCCAGATTAAATATTCTTTGCAAGAAAATACTTCTTCTATGGCAGCCGAGGCAACACAATTGGGGAAAATTCGAAGACTTGCAATTTACTTGGATAAGAATGCAGATATGTTGGTTTCTTCAAGAGATGAAACAAATGGTCACGTAAGGTCTCTATTATTCTTTGGCCTAAGAGAATGGATTCCAAAAAGTGAAAAAGGATTACTATCTCCGTTGAAGGATTTCAAAGTGCTCAGAGTTTTGAAGGTTGAAGGTCTTCGGGCAAGAAGAGTAGAGTTGCCAAGTGAAATTGGAAATATGGTACACTTAAGGTTTCTAAGTGTGAGGAGGAGCGAAATAAAAACGTCTCCGCCATCCCTAGGTAATTTAGTATGCTTGCAAACTCTTGATTTTCGTGTTTCAAGTTATATTGACATGGTCATCCCAAATGTGATAAAGAAGATGAAACAATTAAGACATTTATATTTACCTTGGAATTACAGAGCAAAGGGTAAGGTAGAGCTGTCTACTCTTGGCCATCTACAGACCTTACATAACCTTTCAAGTGAGTATTGTGATTTGAAAGATGTTGGTAGATTAACCAATCTTAGAAAACTGAAAATAAGAGTGTTAGGCTCTTTGCAAAATCTGGAGGAAATCTTAAAATCTACAAGCAGCACGCTTAACCGTATCCGGTCTCTAATTGTGAAAAATGACACAAATAGCGGTGAAGAGCAAGCTATGCAAATAGTATCAAGTTGTCCGGGTATATACAAATTGACGTTGGATGGGCCAATCGCAGAATTACCGAAAGAGCTACACAACTATCCAAACCTCACAAAGTTAGTATTGTGGAGTTGTGGTCTCAAGGAGGACCAAATGGGAATACTAGAGAAGCTGCCAAACCTAACAAATTTGAAGCTTTTTGAAAAACCTTTCGAGGAGAATACAAAGATACTGGTTTTCTCCAGAGGAGGATTTCCTTCTCTTGAATTTCTTCATGTTTCTAGAATGGACCAAATAACAGAGCTGAGGGTAGAGAAAGGAGCCATGCCTCGTCTCTGTCAATTGTGCATCCAATTTTGCTCGGGATTGACTACACTTCCAGATGGGCTGAGATATCTTATTTATCTCAAGGAATTAACCATTAGATGGATGTGTAGAGAACTCCACCGTCGGATTGAGGAAGATGGAGAGGATTTCTATAAAATTCAACATGTACCTTGCCTTTTAATTGGAGAACCACTTGATTAA

Protein Analysis

936

Amino Acids

107.5

Weight (kDa)

8.61

Isoelectric Point (pI)

44.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000069)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G10920 AT1G50180 AT1G53350 AT1G58390 AT1G58390 AT1G58400 AT1G58400 AT1G58400 AT1G58410 AT1G58410 AT1G58410 AT1G58410 AT1G58602 AT1G58602 AT1G58807 AT1G58807 AT1G58848 AT1G58848 AT1G59124 AT1G59124 AT1G59218 AT1G59218 AT1G59218 AT1G59620 AT1G59780 AT1G59780 AT5G35450 AT5G35450 AT5G43470 AT5G43470 AT5G43470 AT5G43470 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620 AT5G48620
fragaria_vesca FvH4_4g04072 FvH4_4g22931 FvH4_4g22931 FvH4_4g22940 FvH4_6g49940 FvH4_6g49940 FvH4_7g08100 FvH4_7g08870 FvH4_7g08870 FvH4_7g09280 FvH4_7g09290 FvH4_7g15190 FvH4_7g15200 FvH4_7g15240 FvH4_7g15240 FvH4_7g33440
malus_domestica MD00G1174600.v1.1 MD01G1113700.v1.1 MD03G1071300.v1.1 MD04G1041500.v1.1 MD04G1238000.v1.1 MD07G1029000.v1.1 MD07G1092100.v1.1 MD07G1092300.v1.1 MD07G1092600.v1.1 MD12G1256300.v1.1 MD13G1128200.v1.1 MD13G1128400.v1.1 MD17G1268000.v1.1
prunus_persica Prupe.1G041300_v2.0.a1 Prupe.1G041300_v2.0.a1 Prupe.1G042900_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043100_v2.0.a1 Prupe.1G043600_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G043700_v2.0.a1 Prupe.1G046700_v2.0.a1 Prupe.1G047700_v2.0.a1 Prupe.1G047900_v2.0.a1 Prupe.1G048000_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G048500_v2.0.a1 Prupe.1G049900_v2.0.a1 Prupe.1G051500_v2.0.a1 Prupe.1G051800_v2.0.a1 Prupe.1G051900_v2.0.a1 Prupe.1G052200_v2.0.a1 Prupe.1G194900_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217800_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.1G217900_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117200_v2.0.a1 Prupe.2G117300_v2.0.a1 Prupe.2G117400_v2.0.a1 Prupe.2G117500_v2.0.a1 Prupe.2G117700_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G118000_v2.0.a1 Prupe.2G119900_v2.0.a1
pyrus_communis pycom03g05750 pycom04g21110 pycom07g07530 pycom07g07590 pycom13g11110 pycom13g11140 pycom13g11160 pycom13g11170 pycom17g26680
rosa_chinensis RchiOBHm_Chr1g0341231 RchiOBHm_Chr1g0344091 RchiOBHm_Chr1g0344161 RchiOBHm_Chr1g0345001 RchiOBHm_Chr1g0345351 RchiOBHm_Chr1g0345371 RchiOBHm_Chr1g0345391 RchiOBHm_Chr1g0345531 RchiOBHm_Chr1g0345551 RchiOBHm_Chr1g0345571 RchiOBHm_Chr1g0345581 RchiOBHm_Chr1g0345661 RchiOBHm_Chr1g0345691 RchiOBHm_Chr1g0345761 RchiOBHm_Chr1g0345791 RchiOBHm_Chr1g0345821 RchiOBHm_Chr1g0345911 RchiOBHm_Chr1g0345941 RchiOBHm_Chr1g0357611 RchiOBHm_Chr1g0357911 RchiOBHm_Chr1g0357921 RchiOBHm_Chr1g0357931 RchiOBHm_Chr1g0357971 RchiOBHm_Chr1g0358121 RchiOBHm_Chr1g0383491 RchiOBHm_Chr1g0383511 RchiOBHm_Chr1g0383521 RchiOBHm_Chr3g0480581 RchiOBHm_Chr4g0394341 RchiOBHm_Chr4g0394361 RchiOBHm_Chr4g0394411 RchiOBHm_Chr4g0394441 RchiOBHm_Chr4g0407681 RchiOBHm_Chr4g0429191 RchiOBHm_Chr4g0429201 RchiOBHm_Chr4g0429211 RchiOBHm_Chr4g0429221 RchiOBHm_Chr6g0265091
rosa_laevigata RLG00000007088 RLG00000008700 RLG00000009190 RLG00000009702 RLG00000014210 RLG00000028829 RLG00000028833 RLG00000028837 RLG00000028838 RLG00000028921 RLG00000028926
rosa_multiflora Rmu_co8366955.1_g000001 Rmu_co8394205.1_g000001 Rmu_sc0000019.1_g000001 Rmu_sc0000054.1_g000031 Rmu_sc0000054.1_g000033 Rmu_sc0000200.1_g000002 Rmu_sc0000200.1_g000007 Rmu_sc0000200.1_g000018 Rmu_sc0000200.1_g000020 Rmu_sc0000200.1_g000021 Rmu_sc0000251.1_g000012 Rmu_sc0000251.1_g000015 Rmu_sc0000251.1_g000028 Rmu_sc0000253.1_g000015 Rmu_sc0000255.1_g000045 Rmu_sc0000255.1_g000046 Rmu_sc0001292.1_g000013 Rmu_sc0001292.1_g000018 Rmu_sc0001292.1_g000028 Rmu_sc0001292.1_g000029 Rmu_sc0001349.1_g000006 Rmu_sc0001349.1_g000014 Rmu_sc0001582.1_g000006 Rmu_sc0001582.1_g000018 Rmu_sc0001582.1_g000020 Rmu_sc0001692.1_g000007 Rmu_sc0001692.1_g000024 Rmu_sc0001692.1_g000026 Rmu_sc0001692.1_g000029 Rmu_sc0001692.1_g000030 Rmu_sc0001835.1_g000006 Rmu_sc0001835.1_g000010 Rmu_sc0002071.1_g000005 Rmu_sc0002276.1_g000002 Rmu_sc0002276.1_g000009 Rmu_sc0002329.1_g000018 Rmu_sc0002329.1_g000023 Rmu_sc0002329.1_g000025 Rmu_sc0002523.1_g000005 Rmu_sc0003573.1_g000005 Rmu_sc0003573.1_g000006 Rmu_sc0004099.1_g000021 Rmu_sc0005812.1_g000009 Rmu_sc0006271.1_g000002 Rmu_sc0006287.1_g000038 Rmu_sc0006439.1_g000008 Rmu_sc0007456.1_g000004 Rmu_sc0007581.1_g000009 Rmu_sc0007849.1_g000014 Rmu_sc0008115.1_g000012 Rmu_sc0010521.1_g000004 Rmu_sc0012471.1_g000017 Rmu_sc0014762.1_g000001 Rmu_sc0015150.1_g000003 Rmu_sc0017221.1_g000001 Rmu_sc0017299.1_g000001 Rmu_sc0017299.1_g000002 Rmu_sc0021457.1_g000001 Rmu_sc0022067.1_g000001 Rmu_sc0033275.1_g000001 Rmu_ssc0000245.1_g000012 Rmu_ssc0000359.1_g000035 Rmu_ssc0000359.1_g000067 Rmu_ssc0000359.1_g000072 Rmu_ssc0000434.1_g000005 Rmu_ssc0000434.1_g000007
rosa_roxburghii Rroxscaffold_4G00298420 Rroxscaffold_4G00298720 Rroxscaffold_4G00308990 Rroxscaffold_4G00309000 Rroxscaffold_4G00309010 Rroxscaffold_4G00309050 Rroxscaffold_4G00309070 Rroxscaffold_4G00309100 Rroxscaffold_4G00310030 Rroxscaffold_4G00310050 Rroxscaffold_4G00311880 Rroxscaffold_5G00339420 Rroxscaffold_5G00339450 Rroxscaffold_5G00344880 Rroxscaffold_5G00352270 Rroxscaffold_5G00362240 Rroxscaffold_5G00370840 Rroxscaffold_7G00202970
rosa_rugosa Rorug01G0159100.1 Rorug01G0159200.1 Rorug01G0171700 Rorug01G0171900 Rorug01G0172000 Rorug01G0191700 Rorug01G0191800 Rorug01G0256900 Rorug01G0257000 Rorug01G0257100 Rorug03G0198000 Rorug03G0366300.1 Rorug03G0366400.1 Rorug03G0366500.1 Rorug04G0081200 Rorug04G0081200 Rorug04G0081200 Rorug04G0233700 Rorug04G0233800 Rorug04G0233800 Rorug06G0013300
rosa_samantha Rh1CG138800 Rh1CG161300 Rh1CG173800 Rh1CG179800 Rh1CG180100 Rh1CG180500 Rh1CG180800 Rh1CG180900 Rh1CG194100 Rh1DG205100 Rh3AG236300 Rh4AG052000 Rh4AG052100 Rh4AG145900 Rh4AG289700 Rh4AG289800 Rh6AG136800 Rh6AG137300 Rh6BG133600 Rh6CG132000 Rh6CG134000 Rh6DG119300
rosa_wichuraiana Rw0G003420 Rw1G015500 Rw1G016110 Rw1G016180 Rw1G016210 Rw1G016230 Rw1G016280 Rw1G016440 Rw1G016450 Rw1G016460 Rw1G016480 Rw1G017490 Rw1G024140 Rw1G024160 Rw3G022530 Rw4G004140 Rw4G004190 Rw4G011850 Rw6G011800

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 399
AccB7I CCANNNNNTGG 1 cut(s) 2706
AccI GTMKAC 1 cut(s) 2081
AciI CCGC 6 cut(s) 203, 338, 429, 594, 1925, 2280
AclI AACGTT 2 cut(s) 522, 688
AcoI YGGCCR 1 cut(s) 2089
AcsI RAATTY 9 cut(s) 116, 366, 385, 717, 1235, 1644, 2467, 2546, 2763
AcuI CTGAAG 1 cut(s) 1347
AcvI CACGTG 1 cut(s) 1439
AfaI GTAC 4 cut(s) 1064, 1536, 1878, 2775
AfiI CCNNNNNNNGG 3 cut(s) 864, 1934, 2706
AflII CTTAAG 1 cut(s) 1882
AflIII ACRYGT 2 cut(s) 1542, 2770
AloI GAACNNNNNNTCC 2 cut(s) 50, 82
Alw21I GWGCWC 3 cut(s) 30, 911, 1809
Alw26I GTCTC 8 cut(s) 36, 1387, 1533, 1731, 1926, 2256, 2423, 2618
Ama87I CYCGRG 2 cut(s) 1390, 2641
AoxI GGCC 4 cut(s) 271, 1741, 2089, 2345
ApeKI GCWGC 5 cut(s) 98, 649, 1619, 2229, 2452
ApoI RAATTY 9 cut(s) 116, 366, 385, 717, 1235, 1644, 2467, 2546, 2763
Asp700I GAANNNNTTC 7 cut(s) 478, 800, 1572, 1755, 1796, 1830, 2550
AspA2I CCTAGG 1 cut(s) 1933
AspS9I GGNCC 3 cut(s) 2345, 2428, 2569
AsuC2I CCSGG 1 cut(s) 2319
AsuHPI GGTGA 4 cut(s) 40, 449, 559, 2294
AsuII TTCGAA 1 cut(s) 1648
AvaI CYCGRG 2 cut(s) 1390, 2641
AvaII GGWCC 2 cut(s) 2428, 2569
AvrII CCTAGG 1 cut(s) 1933
BaeI ACNNNNGTAYC 2 cut(s) 156, 189
BalI TGGCCA 1 cut(s) 2091
BbrPI CACGTG 1 cut(s) 1439
BbsI GAAGAC 3 cut(s) 611, 1657, 1823
Bbv12I GWGCWC 3 cut(s) 30, 911, 1809
BbvCI CCTCAGC 2 cut(s) 6, 2585
BbvI GCAGC 5 cut(s) 85, 661, 1631, 2241, 2439
BccI CCATC 6 cut(s) 1936, 2100, 2336, 2657, 2700, 2738
BceAI ACGGC 1 cut(s) 69
BcgI CGANNNNNNTGC 2 cut(s) 927, 961
BciVI GTATCC 1 cut(s) 2255
BcnI CCSGG 1 cut(s) 2319
BcoDI GTCTC 8 cut(s) 36, 1387, 1533, 1731, 1926, 2256, 2423, 2618
BfaI CTAG 5 cut(s) 113, 1148, 1934, 2444, 2562
BfmI CTRYAG 1 cut(s) 2096
BfrI CTTAAG 1 cut(s) 1882
BfuI GTATCC 1 cut(s) 2255
BisI GCNGC 7 cut(s) 99, 204, 339, 650, 1620, 2230, 2453
BlnI CCTAGG 1 cut(s) 1933
BlsI GCNGC 7 cut(s) 100, 205, 340, 651, 1621, 2231, 2454
Bme1390I CCNGG 1 cut(s) 2319
Bme18I GGWCC 2 cut(s) 2428, 2569
BmeT110I CYCGRG 2 cut(s) 1390, 2641
BmgT120I GGNCC 3 cut(s) 2345, 2428, 2569
BmiI GGNNCC 2 cut(s) 750, 2602
BmrFI CCNGG 1 cut(s) 2319
BmrI ACTGGG 1 cut(s) 1509
BmsI GCATC 6 cut(s) 130, 136, 190, 312, 1256, 2637
BmuI ACTGGG 1 cut(s) 1509
BpiI GAAGAC 3 cut(s) 611, 1657, 1823
BpmI CTGGAG 4 cut(s) 965, 1562, 2225, 2506
Bpu10I CCTNAGC 3 cut(s) 6, 467, 2585
Bpu14I TTCGAA 1 cut(s) 1648
BpuEI CTTGAG 4 cut(s) 260, 1037, 2405, 2672
BpuMI CCSGG 1 cut(s) 2319
Bsa29I ATCGAT 1 cut(s) 1050
BsaAI YACGTR 2 cut(s) 1439, 1720
BsaBI GATNNNNATC 1 cut(s) 1780
BsaI GGTCTC 3 cut(s) 1731, 2256, 2423
BsaJI CCNNGG 5 cut(s) 744, 858, 1623, 1933, 2045
BsaWI WCCGGW 1 cut(s) 2247
BsaXI ACNNNNNCTCC 2 cut(s) 2401, 2431
Bsc4I CCNNNNNNNGG 3 cut(s) 864, 1934, 2706
Bse1I ACTGG 2 cut(s) 1504, 2517
Bse8I GATNNNNATC 1 cut(s) 1780
BseCI ATCGAT 1 cut(s) 1050
BseDI CCNNGG 5 cut(s) 744, 858, 1623, 1933, 2045
BseGI GGATG 5 cut(s) 1928, 1995, 2347, 2628, 2715
BseJI GATNNNNATC 1 cut(s) 1780
BseLI CCNNNNNNNGG 3 cut(s) 864, 1934, 2706
BseMII CTCAG 4 cut(s) 99, 1822, 2576, 2660
BseNI ACTGG 2 cut(s) 1504, 2517
BseRI GAGGAG 4 cut(s) 1915, 1918, 2510, 2541
BseXI GCAGC 5 cut(s) 85, 661, 1631, 2241, 2439
BsgI GTGCAG 1 cut(s) 84
BshFI GGCC 4 cut(s) 273, 1743, 2091, 2347
BshVI ATCGAT 1 cut(s) 1050
BsiHKAI GWGCWC 3 cut(s) 30, 911, 1809
BsiHKCI CYCGRG 2 cut(s) 1390, 2641
BsiSI CCGG 3 cut(s) 1140, 2248, 2318
BslFI GGGAC 4 cut(s) 431, 437, 1231, 1516
BslI CCNNNNNNNGG 3 cut(s) 864, 1934, 2706
BsmAI GTCTC 8 cut(s) 36, 1387, 1533, 1731, 1926, 2256, 2423, 2618
BsmBI CGTCTC 2 cut(s) 1926, 2618
BsmFI GGGAC 4 cut(s) 431, 437, 1231, 1516
BsmI GAATGC 1 cut(s) 1681
BsnI GGCC 4 cut(s) 273, 1743, 2091, 2347
Bso31I GGTCTC 3 cut(s) 1731, 2256, 2423
BsoBI CYCGRG 2 cut(s) 1390, 2641
Bsp119I TTCGAA 1 cut(s) 1648
Bsp1286I GDGCHC 3 cut(s) 30, 911, 1809
Bsp1407I TGTACA 1 cut(s) 1062
Bsp143I GATC 2 cut(s) 380, 1528
BspACI CCGC 6 cut(s) 203, 338, 429, 594, 1925, 2280
BspANI GGCC 4 cut(s) 273, 1743, 2091, 2347
BspCNI CTCAG 4 cut(s) 100, 1821, 2577, 2661
BspDI ATCGAT 1 cut(s) 1050
BspHI TCATGA 1 cut(s) 1225
BspLI GGNNCC 2 cut(s) 750, 2602
BspQI GCTCTTC 1 cut(s) 2280
BspT104I TTCGAA 1 cut(s) 1648
BspTI CTTAAG 1 cut(s) 1882
BspTNI GGTCTC 3 cut(s) 1731, 2256, 2423
BsrGI TGTACA 1 cut(s) 1062
BsrI ACTGG 2 cut(s) 1504, 2517
BssECI CCNNGG 5 cut(s) 744, 858, 1623, 1933, 2045
BssMI GATC 2 cut(s) 380, 1528
BssT1I CCWWGG 3 cut(s) 744, 1933, 2045
Bst4CI ACNGT 5 cut(s) 563, 1165, 1284, 2243, 2729
Bst6I CTCTTC 4 cut(s) 1067, 1224, 1837, 2280
BstAFI CTTAAG 1 cut(s) 1882
BstAPI GCANNNNNTGC 1 cut(s) 2296
BstAUI TGTACA 1 cut(s) 1062
BstBAI YACGTR 2 cut(s) 1439, 1720
BstBI TTCGAA 1 cut(s) 1648
BstC8I GCNNGC 5 cut(s) 301, 1137, 1952, 2234, 2292
BstF5I GGATG 5 cut(s) 1928, 1995, 2347, 2628, 2715
BstKTI GATC 2 cut(s) 383, 1531
BstMAI GTCTC 8 cut(s) 36, 1387, 1533, 1731, 1926, 2256, 2423, 2618
BstMBI GATC 2 cut(s) 380, 1528
BstMWI GCNNNNNNNGC 3 cut(s) 463, 1625, 2296
BstNSI RCATGY 2 cut(s) 1546, 2774
BstSCI CCNGG 1 cut(s) 2317
BstSFI CTRYAG 1 cut(s) 2096
BstV1I GCAGC 5 cut(s) 85, 661, 1631, 2241, 2439
BstV2I GAAGAC 3 cut(s) 611, 1657, 1823
Bsu15I ATCGAT 1 cut(s) 1050
BsuI GTATCC 1 cut(s) 2255
BsuRI GGCC 4 cut(s) 273, 1743, 2091, 2347
BsuTUI ATCGAT 1 cut(s) 1050
BtsCI GGATG 5 cut(s) 1928, 1995, 2347, 2628, 2715
BtsIMutI CAGTG 1 cut(s) 1161
Cac8I GCNNGC 5 cut(s) 301, 1137, 1952, 2234, 2292
CciI TCATGA 1 cut(s) 1225
Cfr13I GGNCC 3 cut(s) 2345, 2428, 2569
ClaI ATCGAT 1 cut(s) 1050
Csp6I GTAC 4 cut(s) 1063, 1535, 1877, 2774
CviQI GTAC 4 cut(s) 1063, 1535, 1877, 2774
DpnI GATC 2 cut(s) 382, 1530
DpnII GATC 2 cut(s) 380, 1528
DraI TTTAAA 1 cut(s) 1240
EaeI YGGCCR 1 cut(s) 2089
Eam1104I CTCTTC 4 cut(s) 1067, 1224, 1837, 2280
EarI CTCTTC 4 cut(s) 1067, 1224, 1837, 2280
EciI GGCGGA 1 cut(s) 1914
Eco130I CCWWGG 3 cut(s) 744, 1933, 2045
Eco147I AGGCCT 1 cut(s) 273
Eco31I GGTCTC 3 cut(s) 1731, 2256, 2423
Eco32I GATATC 2 cut(s) 1048, 2675
Eco47I GGWCC 2 cut(s) 2428, 2569
Eco57I CTGAAG 1 cut(s) 1347
Eco72I CACGTG 1 cut(s) 1439
Eco88I CYCGRG 2 cut(s) 1390, 2641
EcoRI GAATTC 1 cut(s) 116
EcoRV GATATC 2 cut(s) 1048, 2675
EcoT14I CCWWGG 3 cut(s) 744, 1933, 2045
EcoT22I ATGCAT 1 cut(s) 543
ErhI CCWWGG 3 cut(s) 744, 1933, 2045
Esp3I CGTCTC 2 cut(s) 1926, 2618
FaqI GGGAC 4 cut(s) 431, 437, 1231, 1516
FauNDI CATATG 1 cut(s) 848
FblI GTMKAC 1 cut(s) 2081
Fnu4HI GCNGC 7 cut(s) 99, 204, 339, 650, 1620, 2230, 2453
FokI GGATG 5 cut(s) 1915, 1982, 2354, 2615, 2722
Fsp4HI GCNGC 7 cut(s) 99, 204, 339, 650, 1620, 2230, 2453
FspBI CTAG 5 cut(s) 113, 1148, 1934, 2444, 2562
GluI GCNGC 7 cut(s) 99, 204, 339, 650, 1620, 2230, 2453
GsuI CTGGAG 4 cut(s) 965, 1562, 2225, 2506
HaeIII GGCC 4 cut(s) 273, 1743, 2091, 2347
HapII CCGG 3 cut(s) 1140, 2248, 2318
HindIII AAGCTT 2 cut(s) 797, 2474
HinfI GANTC 8 cut(s) 129, 171, 251, 440, 515, 868, 1521, 1756
HpaII CCGG 3 cut(s) 1140, 2248, 2318
HphI GGTGA 4 cut(s) 40, 449, 559, 2294
Hpy166II GTNNAC 4 cut(s) 328, 1065, 1879, 2082
Hpy188I TCNGA 5 cut(s) 41, 701, 1036, 1811, 2733
Hpy8I GTNNAC 4 cut(s) 328, 1065, 1879, 2082
Hpy99I CGWCG 1 cut(s) 2733
HpyAV CCTTC 6 cut(s) 308, 1370, 1786, 1813, 1820, 2547
HpyCH4III ACNGT 5 cut(s) 563, 1165, 1284, 2243, 2729
HpyCH4IV ACGT 8 cut(s) 496, 522, 688, 894, 1438, 1719, 1919, 2336
HpyF10VI GCNNNNNNNGC 3 cut(s) 463, 1625, 2296
HpySE526I ACGT 8 cut(s) 496, 522, 688, 894, 1438, 1719, 1919, 2336
Kzo9I GATC 2 cut(s) 380, 1528
LguI GCTCTTC 1 cut(s) 2280
LmnI GCTCC 3 cut(s) 954, 1905, 2600
Lsp1109I GCAGC 5 cut(s) 85, 661, 1631, 2241, 2439
LweI GCATC 6 cut(s) 130, 136, 190, 312, 1256, 2637
MaeI CTAG 5 cut(s) 113, 1148, 1934, 2444, 2562
MaeII ACGT 8 cut(s) 496, 522, 688, 894, 1438, 1719, 1919, 2336
MaeIII GTNAC 1 cut(s) 1715
MalI GATC 2 cut(s) 382, 1530
MboI GATC 2 cut(s) 380, 1528
MfeI CAATTG 3 cut(s) 452, 1634, 2621
MhlI GDGCHC 3 cut(s) 30, 911, 1809
MlsI TGGCCA 1 cut(s) 2091
MluNI TGGCCA 1 cut(s) 2091
MlyI GAGTC 2 cut(s) 180, 524
MmeI TCCRAC 3 cut(s) 543, 2319, 2711
Mox20I TGGCCA 1 cut(s) 2091
Mph1103I ATGCAT 1 cut(s) 543
MroXI GAANNNNTTC 7 cut(s) 478, 800, 1572, 1755, 1796, 1830, 2550
MscI TGGCCA 1 cut(s) 2091
MslI CAYNNNNRTG 2 cut(s) 1130, 1191
Msp20I TGGCCA 1 cut(s) 2091
MspA1I CMGCKG 1 cut(s) 429
MspCI CTTAAG 1 cut(s) 1882
MspI CCGG 3 cut(s) 1140, 2248, 2318
MspR9I CCNGG 1 cut(s) 2319
MunI CAATTG 3 cut(s) 452, 1634, 2621
Mva1269I GAATGC 1 cut(s) 1681
MwoI GCNNNNNNNGC 3 cut(s) 463, 1625, 2296
NciI CCSGG 1 cut(s) 2319
NdeI CATATG 1 cut(s) 848
NdeII GATC 2 cut(s) 380, 1528
NlaIV GGNNCC 2 cut(s) 750, 2602
NmeAIII GCCGAG 1 cut(s) 1648
NmuCI GTSAC 1 cut(s) 1715
NsiI ATGCAT 1 cut(s) 543
NspI RCATGY 2 cut(s) 1546, 2774
NspV TTCGAA 1 cut(s) 1648
PaeR7I CTCGAG 1 cut(s) 1390
PagI TCATGA 1 cut(s) 1225
PceI AGGCCT 1 cut(s) 273
PciI ACATGT 2 cut(s) 1542, 2770
PciSI GCTCTTC 1 cut(s) 2280
PctI GAATGC 1 cut(s) 1681
PdmI GAANNNNTTC 7 cut(s) 478, 800, 1572, 1755, 1796, 1830, 2550
PfeI GAWTC 6 cut(s) 129, 251, 440, 868, 1521, 1756
PflFI GACNNNGTC 1 cut(s) 1991
PflMI CCANNNNNTGG 1 cut(s) 2706
PkrI GCNGC 7 cut(s) 100, 205, 340, 651, 1621, 2231, 2454
PleI GAGTC 2 cut(s) 179, 523
PmaCI CACGTG 1 cut(s) 1439
PmlI CACGTG 1 cut(s) 1439
PpsI GAGTC 2 cut(s) 179, 523
Ppu21I YACGTR 2 cut(s) 1439, 1720
PscI ACATGT 2 cut(s) 1542, 2770
PsiI TTATAA 1 cut(s) 399
Psp1406I AACGTT 2 cut(s) 522, 688
PspCI CACGTG 1 cut(s) 1439
PspN4I GGNNCC 2 cut(s) 750, 2602
PspPI GGNCC 3 cut(s) 2345, 2428, 2569
PsyI GACNNNGTC 1 cut(s) 1991
RsaI GTAC 4 cut(s) 1064, 1536, 1878, 2775
RsaNI GTAC 4 cut(s) 1063, 1535, 1877, 2774
RseI CAYNNNNRTG 2 cut(s) 1130, 1191
SapI GCTCTTC 1 cut(s) 2280
SatI GCNGC 7 cut(s) 99, 204, 339, 650, 1620, 2230, 2453
Sau3AI GATC 2 cut(s) 380, 1528
Sau96I GGNCC 3 cut(s) 2345, 2428, 2569
SchI GAGTC 2 cut(s) 180, 524
ScrFI CCNGG 1 cut(s) 2319
SduI GDGCHC 3 cut(s) 30, 911, 1809
SfaNI GCATC 6 cut(s) 130, 136, 190, 312, 1256, 2637
SfcI CTRYAG 1 cut(s) 2096
Sfr274I CTCGAG 1 cut(s) 1390
SfuI TTCGAA 1 cut(s) 1648
SinI GGWCC 2 cut(s) 2428, 2569
SlaI CTCGAG 1 cut(s) 1390
SmiMI CAYNNNNRTG 2 cut(s) 1130, 1191
SmlI CTYRAG 6 cut(s) 275, 1016, 1390, 1882, 2420, 2687
SmoI CTYRAG 6 cut(s) 275, 1016, 1390, 1882, 2420, 2687
SseBI AGGCCT 1 cut(s) 273
SsiI CCGC 6 cut(s) 203, 338, 429, 594, 1925, 2280
SspI AATATT 2 cut(s) 915, 1589
SspMI CTAG 5 cut(s) 113, 1148, 1934, 2444, 2562
StuI AGGCCT 1 cut(s) 273
StyD4I CCNGG 1 cut(s) 2317
StyI CCWWGG 3 cut(s) 744, 1933, 2045
TaaI ACNGT 5 cut(s) 563, 1165, 1284, 2243, 2729
TaiI ACGT 8 cut(s) 499, 525, 691, 897, 1441, 1722, 1922, 2339
TaqI TCGA 7 cut(s) 30, 383, 1050, 1099, 1391, 1648, 2493
TatI WGTACW 1 cut(s) 1062
TauI GCSGC 2 cut(s) 206, 341
TfiI GAWTC 6 cut(s) 129, 251, 440, 868, 1521, 1756
TscAI CASTG 1 cut(s) 1168
TseFI GTSAC 1 cut(s) 1715
TseI GCWGC 5 cut(s) 98, 649, 1619, 2229, 2452
Tsp45I GTSAC 1 cut(s) 1715
TspDTI ATGAA 9 cut(s) 109, 474, 570, 647, 798, 1242, 1719, 2033, 2543
TspGWI ACGGA 3 cut(s) 10, 164, 1776
TspRI CASTG 1 cut(s) 1168
Tth111I GACNNNGTC 1 cut(s) 1991
Van91I CCANNNNNTGG 1 cut(s) 2706
Vha464I CTTAAG 1 cut(s) 1882
VpaK11BI GGWCC 2 cut(s) 2428, 2569
XapI RAATTY 9 cut(s) 116, 366, 385, 717, 1235, 1644, 2467, 2546, 2763
XbaI TCTAGA 1 cut(s) 2561
XceI RCATGY 2 cut(s) 1546, 2774
XhoI CTCGAG 1 cut(s) 1390
XmaJI CCTAGG 1 cut(s) 1933
XmiI GTMKAC 1 cut(s) 2081
XmnI GAANNNNTTC 7 cut(s) 478, 800, 1572, 1755, 1796, 1830, 2550
XspI CTAG 5 cut(s) 113, 1148, 1934, 2444, 2562
Zsp2I ATGCAT 1 cut(s) 543
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.